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  • 1
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    Single transit candidates from K2: detection and period estimation (2016)
    Oxford University Press
    Details
    Publication Date: 2016-02-12
    Description: Photometric surveys such as Kepler have the precision to identify exoplanet and eclipsing binary candidates from only a single transit. K2, with its 75 d campaign duration, is ideally suited to detect significant numbers of single-eclipsing objects. Here we develop a Bayesian transit-fitting tool (‘ Namaste : An Mcmc Analysis of Single Transit Exoplanets’) to extract orbital information from single transit events. We achieve favourable results testing this technique on known Kepler planets, and apply the technique to seven candidates identified from a targeted search of K2 campaigns 1, 2 and 3. We find EPIC203311200 to host an excellent exoplanet candidate with a period, assuming zero eccentricity, of $540 ^{+410}_{-230}$ d and a radius of 0.51 ± 0.05 R Jup . We also find six further transit candidates for which more follow-up is required to determine a planetary origin. Such a technique could be used in the future with TESS , PLATO and ground-based photometric surveys such as NGTS, potentially allowing the detection of planets in reach of confirmation by Gaia .
    Print ISSN: 0035-8711
    Electronic ISSN: 1365-2966
    Topics: Physics
    Published by Oxford University Press
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  • 2
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    The effects of methanol on the trapping of volatile ice components (2015)
    Oxford University Press
    Details
    Publication Date: 2015-02-19
    Description: The evaporation of icy mantles, which have been formed on the surface of dust grains, is acknowledged to give rise to the rich chemistry that has been observed in the vicinity of hot cores and corinos. It has long been established that water ice is the dominant species within many astrophysical ices. However, other molecules found within astrophysical ices, particularly methanol, can influence the desorption of volatile species from the ice. Here we present a detailed investigation of the adsorption and desorption of methanol-containing ices, showing the effect that methanol has on the trapping and release of volatiles from model interstellar ices. OCS and CO 2 have been used as probe molecules since they have been suggested to reside in water-rich and methanol-rich environments. Experiments show that methanol fundamentally changes the desorption characteristics of both OCS and CO 2 , leading to the observation of mainly codesorption of both species with bulk water ice for the tertiary ices and causing a lowering of the temperature of the volcano component of the desorption. In contrast, binary ices are dominated by standard volcano desorption. This observation clearly shows that codepositing astrophysically relevant impurities with water ice, such as methanol, can alter the desorption dynamics of volatiles that become trapped in the pores of the amorphous water ice during the sublimation process. Incorporating experimental data into a simple model to simulate these processes on astrophysical timescales shows that the additional methanol component releases larger amounts of OCS from the ice mantle at lower temperatures and earlier times. These results are of interest to astronomers as they can be used to model the star formation process, hence giving information about the evolution of our Universe.
    Print ISSN: 0035-8711
    Electronic ISSN: 1365-2966
    Topics: Physics
    Published by Oxford University Press
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  • 3
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    Sill morphology and comparison of brittle and non-brittle emplacement mechanisms (2012)
    Geological Society of London
    Details
    Publication Date: 2012-03-08
    Description: Magmatic sheet intrusions contribute significantly to the upper crustal magma transport network. The emplacement mechanism of the magmatic sheets controls the final geometry of the intrusions and the characteristics of host rock deformation. Previous observations have highlighted the preponderance of brittle structures, associated with shallow-level sheet intrusions. However, recent studies have suggested that non-brittle host rock behaviour also occurs, particularly related to the formation of magma fingers during shallow-level sill intrusion. Here, we examine both brittle and non-brittle intrusion mechanisms and expand upon them with field observations from a series of widespread and variable magmatic systems. Non-brittle emplacement appears primarily associated with viscous flow of the host rock during intrusion and is therefore intimately linked to the contemporaneous host rock rheology as well as magma dynamics. Purely brittle and non-brittle emplacement processes are found to be end members with many intrusions containing evidence of both behaviours. Deriving the host rock characteristics is therefore important for discerning potential diagnostic intrusion indicators and intrusion geometries both within the field and in modelling. Incorporation of variable host material behaviours in numerical and analogue modelling, tuned using direct field observations, may consequently further our understanding of the controls on shallow-level intrusion.
    Print ISSN: 0016-7649
    Topics: Geosciences
    Published by Geological Society of London
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  • 4
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    Puoko-nui: a flexible high-speed photometric system (2014)
    Oxford University Press
    Details
    Publication Date: 2014-04-15
    Description: We describe a portable CCD-based instrumentation system designed to efficiently undertake high time precision fast photometry. The key components of the system are (1) an externally triggered commercial frame-transfer CCD, (2) a custom Global Positioning System-derived time source and (3) flexible software for both instrument control and online analysis/display. Two working instruments that implement this design are described. The New Zealand-based instrument employs a Princeton Instruments (PI) 1k 1k CCD and has been used with the 1 m telescope at Mt John University Observatory, while the other uses a newer 1k 1k electron-multiplying CCD supplied by PI and is based at the University of Texas at Austin. We include some recent observations that illustrate the capabilities of the instruments.
    Print ISSN: 0035-8711
    Electronic ISSN: 1365-2966
    Topics: Physics
    Published by Oxford University Press
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  • 5
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    Diversity, Vol. 10, Pages 75: Kuschelysius, a New Alpine Genus of Eugnomine Weevil (Coleoptera: Curculionidae: Curculioninae) from New Zealand (2018)
    MDPI Publishing
    In: Diversity
    Details
    Publication Date: 2018-07-28
    Description: Diversity, Vol. 10, Pages 75: Kuschelysius, a New Alpine Genus of Eugnomine Weevil (Coleoptera: Curculionidae: Curculioninae) from New Zealand Diversity doi: 10.3390/d10030075 Authors: Samuel D. J. Brown Richard A. B. Leschen Kuschelysiusnew genus is described for four species, K. hollowayaenew species, K. durusnew species, K. verbalisnew species and K. nitensnew species, which are found in alpine regions along the length of the South Island of New Zealand. The genus most closely resembles members of the genus Eugnomus but is distinguished from them by the presence of a small pair of post-ocular tubercles and by having appressed scales on the dorsal surfaces. Some members of Kuschelysius appear to be flight-capable with well-developed hindwings, while others have reduced hindwings and are presumably flightless. Many specimens have been collected from the flowers of Dracophyllum traversii, Celmisia and other alpine plants, and the guts of examined specimens contained pollen. We hypothesise that the species of Kuschelysius are pollinators of the New Zealand alpine flora.
    Electronic ISSN: 1424-2818
    Topics: Biology
    Published by MDPI Publishing
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  • 6
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    Distinguishable epidemics of multidrug-resistant Salmonella Typhimurium DT104 in different hosts (2013)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 2013-09-14
    Description: The global epidemic of multidrug-resistant Salmonella Typhimurium DT104 provides an important example, both in terms of the agent and its resistance, of a widely disseminated zoonotic pathogen. Here, with an unprecedented national collection of isolates collected contemporaneously from humans and animals and including a sample of internationally derived isolates, we have used whole-genome sequencing to dissect the phylogenetic associations of the bacterium and its antimicrobial resistance genes through the course of an epidemic. Contrary to current tenets supporting a single homogeneous epidemic, we demonstrate that the bacterium and its resistance genes were largely maintained within animal and human populations separately and that there was limited transmission, in either direction. We also show considerable variation in the resistance profiles, in contrast to the largely stable bacterial core genome, which emphasizes the critical importance of integrated genotypic data sets in understanding the ecology of bacterial zoonoses and antimicrobial resistance.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4012302/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4012302/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Mather, A E -- Reid, S W J -- Maskell, D J -- Parkhill, J -- Fookes, M C -- Harris, S R -- Brown, D J -- Coia, J E -- Mulvey, M R -- Gilmour, M W -- Petrovska, L -- de Pinna, E -- Kuroda, M -- Akiba, M -- Izumiya, H -- Connor, T R -- Suchard, M A -- Lemey, P -- Mellor, D J -- Haydon, D T -- Thomson, N R -- 098051/Wellcome Trust/United Kingdom -- 260864/European Research Council/International -- AI107034/AI/NIAID NIH HHS/ -- HG006139/HG/NHGRI NIH HHS/ -- R01 AI107034/AI/NIAID NIH HHS/ -- R01 GM086887/GM/NIGMS NIH HHS/ -- R01 HG006139/HG/NHGRI NIH HHS/ -- New York, N.Y. -- Science. 2013 Sep 27;341(6153):1514-7. doi: 10.1126/science.1240578. Epub 2013 Sep 12.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton CB10 1SA, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/24030491" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Drug Resistance, Multiple, Bacterial/*genetics ; Epidemics ; Genome, Bacterial ; *Host-Pathogen Interactions ; Humans ; Molecular Sequence Data ; Phylogeny ; Salmonella Infections/epidemiology/*microbiology ; Salmonella Infections, Animal/epidemiology/*microbiology ; Salmonella typhimurium/*classification/drug effects/genetics ; Zoonoses/*microbiology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 7
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    Diversity, Vol. 10, Pages 101: A Tribute to Guillermo (Willy) Kuschel (1918–2017) (2018)
    MDPI
    In: Diversity
    Details
    Publication Date: 2018
    Description: This tribute commemorates the life and work of Guillermo (Willy) Kuschel, who made substantial contributions to the understanding of weevil systematics, evolution and biology. Willy was born in Chile in 1918 and studied philosophy, theology and biology. He became fascinated by weevils early on and completed his Ph.D. degree on South American Erirhinini. Subsequent employment by the University of Chile provided him with many opportunities to further his weevil research and undertake numerous collecting expeditions, including to remote and rugged locations such as the Juan Fernandez Islands and southern Chile. In 1963 he accepted a position at the Department of Scientific and Industrial Research in New Zealand, where he became Head of the Systematics Group in the Entomology Division. His emphasis on field work and collections led to the establishment of the New Zealand Arthropod Collection, which he guided through its greatest period of expansion. His retirement in 1983 offered him increased opportunities to pursue his weevil research. In 1988 he presented a new scheme of the higher classification of weevils, which ignited and inspired much subsequent research into weevil systematics. The breadth and quality of his research and his huge collecting efforts have left a legacy that will benefit future entomologists, especially weevil workers, for decades to come. This tribute presents a biography of Willy and accounts of his contributions to, and impact on, the systematics of weevils both regionally and globally. All of his publications and the genera and species named after him are listed in two appendices.
    Electronic ISSN: 1424-2818
    Topics: Biology
    Published by MDPI
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  • 8
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    Thermalization, condensate growth, and defect formation in an out-of-equilibrium Bose gas (2018)
    American Physical Society (APS)
    Details
    Publication Date: 2018-07-10
    Description: Author(s): D. J. Brown, A. V. H. McPhail, D. H. White, D. Baillie, S. K. Ruddell, and M. D. Hoogerland We experimentally and numerically investigate thermalization processes of a trapped Rb 87 Bose gas, initially prepared in a nonequilibrium state through partial Bragg diffraction of a Bose-Einstein condensate (BEC). The system evolves in a Gaussian potential, where we observe the destruction of the B... [Phys. Rev. A 98, 013606] Published Mon Jul 09, 2018
    Keywords: Matter waves and collective properties of cold atoms and molecules
    Print ISSN: 1050-2947
    Electronic ISSN: 1094-1622
    Topics: Physics
    Published by American Physical Society (APS)
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  • 9
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    A Field-Scale Sensor Network Data Set for Monitoring and Modeling the Spatial and Temporal Variation of Soil Water Content in a Dryland Agricultural Field (2017)
    Wiley
    Details
    Publication Date: 2017-12-05
    Description: We describe a soil water content monitoring data set and auxiliary data collected at a 37 ha experimental no-till farm in the Northwestern United States. Water content measurements have been compiled hourly since 2007 by ECH2O-TE and 5TE sensors installed at 42 locations and five depths (0.3, 0.6, 0.9, 1.2, and 1.5 m, 210 sensors total) across the R.J. Cook Agronomy Farm, a Long-Term Agro-Ecosystem Research Site stationed on complex terrain in a Mediterranean climate. In addition to soil water content readings, the data set includes hourly and daily soil temperature readings, annual crop histories, a digital elevation model, Bt horizon maps, seasonal apparent electrical conductivity, soil texture, and soil bulk density. Meteorological records are also available for this location. We discuss the unique challenges of maintaining the network on an operating farm, and demonstrate the nature and complexity of the soil water content data. This data set is accessible online through the National Agriculture Library, has been assigned a DOI, and will be maintained for the long-term.
    Print ISSN: 0043-1397
    Electronic ISSN: 1944-7973
    Topics: Architecture, Civil Engineering, Surveying , Geography
    Published by Wiley on behalf of American Geophysical Union (AGU).
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  • 10
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    The transgenic expression of LARGE exacerbates the muscle phenotype of dystroglycanopathy mice (2014)
    Oxford University Press
    Details
    Publication Date: 2014-03-06
    Description: Mutations in fukutin-related protein (FKRP) underlie a group of muscular dystrophies associated with the hypoglycosylation of α-dystroglycan (α-DG), a proportion of which show central nervous system involvement. Our original FKRP knock-down mouse (FKRP KD ) replicated many of the characteristics seen in patients at the severe end of the dystroglycanopathy spectrum but died perinatally precluding its full phenotyping and use in testing potential therapies. We have now overcome this by crossing FKRP KD mice with those expressing Cre recombinase under the Sox1 promoter. Owing to our original targeting strategy, this has resulted in the restoration of Fkrp levels in the central nervous system but not the muscle, thereby generating a new model (FKRP MD ) which develops a progressive muscular dystrophy resembling what is observed in limb girdle muscular dystrophy. Like-acetylglucosaminyltransferase (LARGE) is a bifunctional glycosyltransferase previously shown to hyperglycosylate α-DG. To investigate the therapeutic potential of LARGE up-regulation, we have now crossed the FKRP MD line with one overexpressing LARGE and show that, contrary to expectation, this results in a worsening of the muscle pathology implying that any future strategies based upon LARGE up-regulation require careful management.
    Print ISSN: 0964-6906
    Electronic ISSN: 1460-2083
    Topics: Biology , Medicine
    Published by Oxford University Press
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