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  • 1
    Publication Date: 2014-07-26
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kennett, Douglas J -- Asmerom, Yemane -- Kemp, Brian M -- Polyak, Victor -- Bolnick, Deborah A -- Malhi, Ripan S -- Culleton, Brendan J -- New York, N.Y. -- Science. 2014 Jul 25;345(6195):390. doi: 10.1126/science.345.6195.390-a. Epub 2014 Jul 24.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Anthropology and Institutes of Energy and the Environment, Pennsylvania State University, University Park, PA 16802, USA. djk23@psu.edu. ; Department of Earth and Planetary Sciences, University of New Mexico, Albuquerque, NM 87131-0001, USA. ; Department of Anthropology and School of Biological Sciences, Washington State University, Pullman, WA 99164, USA. ; Department of Anthropology and Population Research Center, University of Texas at Austin, Austin, TX 78712, USA. ; Institute of Genomic Biology, University of Illinois, Urbana-Champaign, IL 61801, USA. ; Department of Anthropology and Institutes of Energy and the Environment, Pennsylvania State University, University Park, PA 16802, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25061196" target="_blank"〉PubMed〈/a〉
    Keywords: *Biological Evolution ; Humans ; Indians, North American/*genetics ; *Skeleton
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2014-02-14
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Raff, Jennifer A -- Bolnick, Deborah A -- England -- Nature. 2014 Feb 13;506(7487):162-3. doi: 10.1038/506162a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Anthropology, University of Texas at Austin, Austin, Texas 78712-1723, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/24522593" target="_blank"〉PubMed〈/a〉
    Keywords: Genome, Human/*genetics ; Humans ; Indians, North American/*genetics ; Male ; *Phylogeny
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 3
    Publication Date: 2007-10-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bolnick, Deborah A -- Fullwiley, Duana -- Duster, Troy -- Cooper, Richard S -- Fujimura, Joan H -- Kahn, Jonathan -- Kaufman, Jay S -- Marks, Jonathan -- Morning, Ann -- Nelson, Alondra -- Ossorio, Pilar -- Reardon, Jenny -- Reverby, Susan M -- TallBear, Kimberly -- New York, N.Y. -- Science. 2007 Oct 19;318(5849):399-400.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Anthropology, University of Texas, Austin, TX 78712, USA. deborah.bolnick@mail.utexas.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/17947567" target="_blank"〉PubMed〈/a〉
    Keywords: Continental Population Groups/*genetics ; Databases, Genetic ; Ethnic Groups/*genetics ; Genetic Markers ; Genetics, Medical ; *Genetics, Population/economics/methods/standards ; Haplotypes ; Humans ; *Pedigree
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 4
    Publication Date: 2009-07-04
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lee, Sandra Soo-Jin -- Bolnick, Deborah A -- Duster, Troy -- Ossorio, Pilar -- Tallbear, Kimberly -- K01 HL72465/HL/NHLBI NIH HHS/ -- P50 HG003389/HG/NHGRI NIH HHS/ -- New York, N.Y. -- Science. 2009 Jul 3;325(5936):38-9. doi: 10.1126/science.1173038.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Stanford Center for Biomedical Ethics, Stanford University Medical School, Palo Alto, CA 94304, USA. sandra.lee@stanford.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/19574373" target="_blank"〉PubMed〈/a〉
    Keywords: Bioethical Issues ; Databases, Genetic ; *Genetic Research/ethics ; Genetic Testing/*standards ; *Genetic Variation ; Genetics, Medical ; Genetics, Population/*standards ; Guidelines as Topic ; Humans ; *Pedigree ; Population Groups/*genetics ; Public Policy ; Societies, Scientific ; United States ; United States Government Agencies
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 5
    Publication Date: 2014-05-17
    Description: Because of differences in craniofacial morphology and dentition between the earliest American skeletons and modern Native Americans, separate origins have been postulated for them, despite genetic evidence to the contrary. We describe a near-complete human skeleton with an intact cranium and preserved DNA found with extinct fauna in a submerged cave on Mexico's Yucatan Peninsula. This skeleton dates to between 13,000 and 12,000 calendar years ago and has Paleoamerican craniofacial characteristics and a Beringian-derived mitochondrial DNA (mtDNA) haplogroup (D1). Thus, the differences between Paleoamericans and Native Americans probably resulted from in situ evolution rather than separate ancestry.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Chatters, James C -- Kennett, Douglas J -- Asmerom, Yemane -- Kemp, Brian M -- Polyak, Victor -- Blank, Alberto Nava -- Beddows, Patricia A -- Reinhardt, Eduard -- Arroyo-Cabrales, Joaquin -- Bolnick, Deborah A -- Malhi, Ripan S -- Culleton, Brendan J -- Erreguerena, Pilar Luna -- Rissolo, Dominique -- Morell-Hart, Shanti -- Stafford, Thomas W Jr -- New York, N.Y. -- Science. 2014 May 16;344(6185):750-4. doi: 10.1126/science.1252619.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Applied Paleoscience and DirectAMS, 10322 NE 190th Street, Bothell, WA 98011, USA. paleosci@gmail.com. ; Department of Anthropology and Institutes of Energy and the Environment, Pennsylvania State University, University Park, PA 16802, USA. ; Department of Earth and Planetary Sciences, University of New Mexico, Albuquerque, NM 87131-0001, USA. ; Department of Anthropology and School of Biological Sciences, Washington State University, Pullman, WA 99164, USA. ; Bay Area Underwater Explorers, Berkeley, CA, USA. ; Department of Earth and Planetary Sciences, Northwestern University, Evanston, IL 60208, USA. ; School of Geography and Earth Sciences, McMaster University, Hamilton, Ontario L8S 4K1, Canada. ; Instituto Nacional Antropologia e Historia, Colonia Centro Historico, 06060, Mexico City, DF, Mexico. ; Department of Anthropology and Population Research Center, University of Texas at Austin, Austin, TX 78712, USA. ; Institute for Genomic Biology, University of Illinois, Urbana-Champaign, IL 61801, USA. ; Subdireccion de Arqueologia Subacuatica, Instituto Nacional de Antropologia e Historia, 06070 Mexico City, Mexico. ; Waitt Institute, La Jolla, CA 92038-1948, USA. ; Department of Anthropology, Stanford University, Stanford, CA 94305, USA. ; Centre for AMS C, Department of Physics and Astronomy, Aarhus University, Aarhus, Denmark, and Centre for GeoGenetics, Natural History Museum of Denmark, Geological Museum, Copenhagen, Denmark.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/24833392" target="_blank"〉PubMed〈/a〉
    Keywords: Base Sequence ; *Biological Evolution ; DNA, Mitochondrial/genetics ; Haplotypes ; Humans ; Indians, North American/*genetics ; Mexico ; Molecular Sequence Data ; Paleontology ; Radiometric Dating ; *Skeleton ; Skull/anatomy & histology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 6
    Publication Date: 2015-02-24
    Description: Prufer and Meyer raise concerns over the mitochondrial DNA (mtDNA) results we reported for the Hoyo Negro individual, citing failure of a portion of these data to conform to their expectations of ancient DNA (aDNA). Because damage patterns in aDNA vary, outright rejection of our findings on this basis is unwarranted, especially in light of our other observations.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kemp, Brian M -- Lindo, John -- Bolnick, Deborah A -- Malhi, Ripan S -- Chatters, James C -- New York, N.Y. -- Science. 2015 Feb 20;347(6224):835. doi: 10.1126/science.1261188.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Anthropology and School of Biological Sciences, Washington State University, Pullman, WA 99164, USA. paleosci@gmail.com bmkemp@wsu.edu. ; Department of Anthropology, University of Illinois, Urbana, IL 61801, USA. ; Department of Anthropology and Population Research Center, University of Texas at Austin, Austin, TX 78712, USA. ; Department of Anthropology, University of Illinois, Urbana, IL 61801, USA. Institute for Genomic Biology, University of Illinois, Urbana, IL 61801, USA. ; Applied Paleoscience and DirectAMS, 10322 Northeast 190th Street, Bothell, WA 98011, USA. paleosci@gmail.com bmkemp@wsu.edu.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25700511" target="_blank"〉PubMed〈/a〉
    Keywords: *Biological Evolution ; Humans ; Indians, North American/*genetics ; *Skeleton
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 7
    Publication Date: 2018-04-27
    Keywords: Genetics, Sociology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 8
    ISSN: 1432-1351
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Summary With the aid of a microspectrophotometer the visual pigments and oil globules in the retina of the emu (Dromiceius novae-hollandiae), the brushland tinamou (Nothoprocta c. cinerascens) and the Chilean tinamou (Nothoprocta perdicaria sanborni) were characterized. All three of these palaeognathous birds contain in their rods a typical rhodopsin with λmax near 500 nm. Each of these birds has cones containing iodopsin-like visual pigments with λmax in the 560–570 nm spectral region. No unequivocal evidence was obtained for the presence of cone pigments other than this iodopsin-like pigment, although one cell thought to be a cone, and containing a visual pigment with λmax near 498 nm, was observed in the retina of the brushland tinamou. The oil globule systems of the three palaeognathous species are identical to each other and are much simpler than is typical for neognathous birds in that only two different types of globule are present, one with λT50 at 508 nm and another with λT50 at 568 nm. Comparison of the data with observations made on neognathous species indicates (1) that palaeognathous birds probably have poorer color discrimination capabilities than neognathous birds and (2) that the tinamou is more closely related to the ratites than to the galliform species.
    Type of Medium: Electronic Resource
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  • 9
    Publication Date: 2018-04-20
    Description: To systematically explore complex genetic interactions, we constructed ~200,000 yeast triple mutants and scored negative trigenic interactions. We selected double-mutant query genes across a broad spectrum of biological processes, spanning a range of quantitative features of the global digenic interaction network and tested for a genetic interaction with a third mutation. Trigenic interactions often occurred among functionally related genes, and essential genes were hubs on the trigenic network. Despite their functional enrichment, trigenic interactions tended to link genes in distant bioprocesses and displayed a weaker magnitude than digenic interactions. We estimate that the global trigenic interaction network is ~100 times as large as the global digenic network, highlighting the potential for complex genetic interactions to affect the biology of inheritance, including the genotype-to-phenotype relationship.
    Keywords: Genetics, Online Only
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 10
    Publication Date: 2013-05-10
    Description: Although loss of short-wavelength-sensitive (SWS) cones and dichromatic color vision in mammals has traditionally been linked to a nocturnal lifestyle, recent studies have identified variation in selective pressure for the maintenance of the OPN1SW opsin gene (and thus, potentially dichromacy) among nocturnal mammalian lineages. These studies hypothesize that purifying selection to retain SWS cones may be associated with a selective advantage for nocturnal color vision under certain ecological conditions. In this study, we explore the effect of nocturnal light environment on OPN1SW opsin gene evolution in a diverse sample of nocturnal lemurs (106 individuals, 19 species, and 5 genera). Using both phylogenetic and population genetic approaches, we test whether species from closed canopy rainforests, which are impoverished in short-wavelength light, have experienced relaxed selection compared with species from open canopy forests. We identify clear signatures of differential selection on OPN1SW by habitat type. Our results suggest that open canopy species generally experience strong purifying selection to maintain SWS cones. In contrast, closed canopy species experience weaker purifying selection or a relaxation of selection on OPN1SW . We also found evidence of nonfunctional OPN1SW genes in all Phaner species and in Cheirogaleus medius , implying at least three independent losses of SWS cones in cheirogaleids. Our results suggest that the evolution of color vision in nocturnal lemurs has been influenced by nocturnal light environment.
    Print ISSN: 0737-4038
    Electronic ISSN: 1537-1719
    Topics: Biology
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