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  • 1
    Publication Date: 2020-05-28
    Description: Exploiting bacteriophage-derived homologous recombination processes has enabled precise, multiplex editing of microbial genomes and the construction of billions of customized genetic variants in a single day. The techniques that enable this, multiplex automated genome engineering (MAGE) and directed evolution with random genomic mutations (DIvERGE), are however, currently limited to a handful of microorganisms for which single-stranded DNA-annealing proteins (SSAPs) that promote efficient recombineering have been identified. Thus, to enable genome-scale engineering in new hosts, efficient SSAPs must first be found. Here we introduce a high-throughput method for SSAP discovery that we call “serial enrichment for efficient recombineering” (SEER). By performing SEER inEscherichia colito screen hundreds of putative SSAPs, we identify highly active variants PapRecT and CspRecT. CspRecT increases the efficiency of single-locus editing to as high as 50% and improves multiplex editing by 5- to 10-fold inE. coli, while PapRecT enables efficient recombineering inPseudomonas aeruginosa, a concerning human pathogen. CspRecT and PapRecT are also active in other, clinically and biotechnologically relevant enterobacteria. We envision that the deployment of SEER in new species will pave the way toward pooled interrogation of genotype-to-phenotype relationships in previously intractable bacteria.
    Print ISSN: 0027-8424
    Electronic ISSN: 1091-6490
    Topics: Biology , Medicine , Natural Sciences in General
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  • 2
    Publication Date: 2019-12-15
    Description: Pyrolysis is a thermochemical process that consists of the degradation of organic polymers and biomass minerals in lignocellulose materials. At low pyrolysis temperature (300–400 °C), primarily carbon is produced during the reaction time. Rapid pyrolysis takes place at temperatures between 500 and 650 °C. If the temperature is higher than 700 °C, the final product is methane, also known as biogas. The pyrolysis generator can be combined with a small power plant (CHP), which is a promising technology because the unit can be installed directly near the biomass production, and electricity can be fed de-centrally to the public utility network, while there are several possibilities for using waste heat in local systems. Carbonaceous ash can be utilized well in the agricultural field, because, in areas with intensive farming, the soil suffers from carbon and mineral deficiencies, and the phenomenon of material defect can be reduced by a proper level of implementation. This study describes the technical content of the biochar pilot project, and then, through a detailed presentation of the experimental results, we interpret the new scientific results. Our aim is to improve the quality of the produced gas by increasing the efficiency of the pyrolysis generator. In order for the pyrolysis unit to operate continuously, with proper efficiency and good gas quality, it is necessary to optimize the operation process. Our review reveals that the use of vibration may be advantageous during pyrolysis, which affects the mass of the pyrolysis carbon in a plane. Accordingly, the application of vibration to the input section of the funnel might enhance the quality of the gas, as well. The study concludes that more accurate dimensioning of the main parts of the gas reactor and a more convenient design of the oxidation and reduction zones enhance the good-quality gas output.
    Electronic ISSN: 2079-9276
    Topics: Energy, Environment Protection, Nuclear Power Engineering
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  • 3
    Publication Date: 2018-10-01
    Description: Heavy metal contamination of natural rivers and wastewaters is a problem for both the environment and human society. The accumulation and adsorption of heavy metals could happen with several organic and inorganic matters, but the most used adsorbents are (biological and chemical) organic compounds. This review article presents the basics of heavy metal adsorption on several organic surfaces. There are many organic matters, which seem to be useful as agents for heavy metal adsorption. All of the cited authors and articles present the adsorption kinetics by the most used isotherm models (such as Langmuir and Freundlich isotherms). By comparing several research results presented by a pre-selected assortment of papers, we would like to give an overview of the microbiological, organic chemical, and other surface adsorption possibilities. We draw conclusions for two new adsorption fields (adsorption with biosorbent and artificial materials). We present an optional possibility to study adsorption kinetics, efficiency and regeneration methods to successfully conclude the heavy metal treatment process, and we make some recommendations about the efficient water usage calculations using the water allowance coefficient (WAC) indicator.
    Electronic ISSN: 2073-4441
    Topics: Energy, Environment Protection, Nuclear Power Engineering
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