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  • 1
    Electronic Resource
    Electronic Resource
    Springer
    Journal of computer aided molecular design 5 (1991), S. 335-356 
    ISSN: 1573-4951
    Keywords: Fentanyl ; AM1 ; CHARMm ; Molecular dynamics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary An extensive conformational search of the potent opioid analgesic, fentanyl, was performed using the semiempirical quantum mechanical method AM1 and the CHARMm potential energy function. A combination of two procedures was used to search the conformational space for fentanyl, which included nested dihedral scans, geometry optimization and molecular dynamics simulation at different temperatures. In addition, the effect of a continuum solvent environment was taken into account by use of appropriate values for the dielectric constant in the CHARMm computations. The results of the conformational search allowed the determination of the probable conformation of fentanyl in polar and nonpolar solvents and of three candidate conformers for its bioactive form.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 44 (1992), S. 235-250 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A pharmacophore for μ-opioid receptor recognition based on a study of the fentanyl class of opioids has recently been characterized in our laboratories. To validate this pharmacophore, we have extended our theoretical studies to include four opiate analogs from structurally different classes and with high affinity but varying selectivity for the μ-opiate receptor. An extensive conformational search of the flexible regions of these compounds has been carried out at two levels of approximations, using the CHARMm force field and the semiempirical molecular orbital method AM1. In a subsequent step, we have determined a series of structural, environmental, and electronic properties for each low-energy conformer of the analogs studied. All four analogs studied can assume a low-energy conformation in which at least three of the four stereoelectronic properties identified as modulators of recognition in the fentanyls are present in the same spatial arrangement. These results provide additional evidence for the plausibility of the proposed pharmacophore for μ-opioid receptor recognition. © 1992 John Wiley & Sons, Inc.
    Additional Material: 8 Ill.
    Type of Medium: Electronic Resource
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