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  • 1
    ISSN: 1432-2242
    Keywords: Glutenin ; Wheat ; Amino acid sequences ; Chromosomes 1A, 1B and 1D
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary The nucleotide and deduced amino acid sequences of a high molecular weight glutenin subunit gene derived from chromosome 1B of bread wheat (Triticum aestivum L.) are reported. The encoded protein corresponds to the y-type subunit 1B9. Comparison of the 5′ upstream untranslated regions of this gene and a previously reported silent y-type gene derived from chromosome 1A showed a deletion of 85 bp in the latter. A sequence present in this region of the 1By 9 gene shows homology with part of the “-300 element” which is conserved in the 5′ upstream regions of other prolamin genes from barley, wheat and maize (Forde BG et al. 1985). It is suggested that the absence of this element is responsible for the lack of expression of the 1Ay gene. Comparison of the derived amino acid sequence with those reported previously for the silent 1Ay gene and the expressed x-type (1Dx2) and y-type (1Dy12) genes derived from chromosome 1D showed that the three y-type proteins are closely related. In contrast the x-type subunit (1Dx2) shows clear differences in the N-terminal region and in the number, type and organisation of repeats in the central repetitive domain.
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical and applied genetics 88 (1994), S. 759-763 
    ISSN: 1432-2242
    Keywords: Wheat ; HMW-glutenin genes ; Bread-making quality ; Polymerase ; Chain Reaction(PCR) ; Multigene families
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Good or poor wheat bread-making quality is associated with two allelic pairs at theGlu-D1 complex locus, designated 1Dx5-1Dy10 and 1Dx2-1Dy12, respectively. The polymerase chain reaction (PCR) verified the presence of the HMW-glutenin 1Dx5 gene from genomic DNA extracted from part of the endosperm of a single dry seed, or a small amount of leaf or root tissue, of several bread-wheat cultivars. This easy, quick, and non-destructive PCR-based approach is proposed as a very efficient and safe alternative to standard procedures for selecting bread-wheat genotypes with good bread-making properties.
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical and applied genetics 95 (1997), S. 59-65 
    ISSN: 1432-2242
    Keywords: Key words α-Gliadin ; Microsatellites ; Sequence variation ; Pseudogenes ; Polyglutamine
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The derived amino-acid sequences of all reported α-gliadin clones are compared and analyzed, and the patterns of sequence change within the α-gliadin family are examined. The most variable sequences are two polyglutamine domains. These two domains are characteristic features of the α-gliadin storage proteins and account for most of the variation in protein size of this otherwise highly conserved protein family. In addition, their encoding DNA sequences form microsatellites. Single-base substitutions in the α-gliadin genes show a preponderance of transitions, including the C to T substitution which contributes to the generation of stop codons, and consequently to the observation that approximately 50% of the α-gliadin genes are pseudogenes. In one unusual gene, a microsatellite has expanded to 321 bp as compared to the normal 36–72 bp, and may result from similar mechanisms that produce polyglutamine-associated genetic diseases in humans. A comparison of the 27 reported sequences show several α-gliadin gene subfamilies, at least some of which are genome specific.
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  • 4
    ISSN: 1432-2242
    Keywords: Key words Wheat ; Low-molecular-weight glutenins ; Quality ; Storage protein ; Multigene family
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Although the low-molecular-weight (LMW) glutenin subunits are important for aspects of wheat quality and dough processing, a detailed description of the DNA structure and encoded polypeptides of this multigene family is still lacking. We report progress in obtaining a more thorough description of the LMW-glutenin gene family from a single wheat cultivar (‘Cheyenne’). Six new genomic sequences are reported and compared with other LMW-glutenin DNA sequences. Subfamilies of sequences are identified, and an analysis of the repetitive domain of these polypeptides suggests a simple codon pattern with implications for modes of evolution of these repeat motifs. Southern analysis is used to estimate 30–40 members of this gene family in cv ‘Cheyenne’, and chromosome assignments are made for most restriction fragments, including the six sequenced genes. The known DNA sequences cluster into two groups, and most of the new sequences are tentatively identified as C-type LMW-glutenins. Representatives of the B-genome genes are still lacking.
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  • 5
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical and applied genetics 77 (1989), S. 689-700 
    ISSN: 1432-2242
    Keywords: Triticum ; Homoeoalleles ; Evolution ; Dough ; Gene library
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary Two high-molecular-weight subunit (HMWS) glutenin genes from the A and B genomes of the hexaploid bread wheat Triticum aestivum L. cv Cheyenne have been isolated and sequenced. Both of these genes are of the high Mr class (x-type) of HMW glutenins, and have not been previously reported. The entire set of six HMW genes from cultivar Cheyenne have now been isolated and characterized. An analysis of the Ax and Bx sequences shows that the Ax sequence is similar to the homoeologous gene from the D genome, while the Bx repeat structure is significantly different. The repetitive region of these proteins can be modelled as a series of interspersed copies of repeat modifs of 6, 9, and 15 amino acid residues. The evolution of these genes includes single-base substitutions over the entire coding region, plus insertion/deletions of single or blocks of repeats in the central repetitive domain.
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  • 6
    ISSN: 1432-2242
    Keywords: Key words Wheat ; α-Gliadins ; Storage proteins ; Prolamines ; Gene family ; Sequence conservation ; Southern analysis
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  A detailed study of the organization of the wheat α-gliadin gene family is described. In the first stage of this study recombinant libraries of sufficient size and quality were constructed to allow examination of large, closely-related, gene families. A large number of α-gliadin clones were then isolated in a partial screen of these libraries. A set of these clones were sequenced and ten new gene sequences are now reported. Including these new sequences, 20 of the 27 known α-gliadin genomic and cDNA sequences are from cv Cheyenne, making this cultivar the best studied for gliadin family organization. An analysis of the DNA flanking the coding regions shows divergences which may indicate the functional ends of the α-gliadin genes. High-resolution Southern analyses on DNA from aneuploid and chromosome-substitution lines allow most of the 20 distinct α-gliadin HindIII restriction fragments in cvs Cheyenne and Chinese Spring to be assigned to specific genomes. It is estimated that as many as 150 α-gliadin genes occur in the cultivar Cheyenne, and the limitations of such estimates are discussed.
    Type of Medium: Electronic Resource
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  • 7
    ISSN: 1432-2242
    Keywords: Key words Wheat ; High-molecular-weight glutenin ; Promoter ; Transposon ; Genome evolution
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The high-molecular-weight glutenin (HMW) genes and encoded subunits are known to be critical for wheat quality characteristics and are among the best-studied cereal research subjects. Two lines of experiments were undertaken to further understand the structure and high expression levels of the HMW-glutenin gene promoters. Cross hybridizations of clones of the paralogous x-type and y-type HMW-glutenin genes to a complete set of six genes from a single cultivar showed that each type hybridizes best within that type. The extent of hybridization was relatively restricted to the coding and immediate flanking DNA sequences. Additional DNA sequences were determined for four published members of the HMW-glutenin gene family (encoding subunits Ax2*, Bx7, Dx5, and Dy10) and showed that the flanking DNA of the examined genes diverge at approximately −1200 bp 5′ to the start codon and 200–400 bp 3′ to the stop codon. These divergence sites may indicate the boundaries of sequences important in gene expression. In addition, promoter sequences were determined for alleles of the Bx gene (Glu-B1-1), a gene reported to show higher levels of expression than other HMW-glutenin genes and with variation among cultivars. The sequences of Bx promoters from three cultivars and one wild tetraploid wheat indicated that all Bx alleles had few differences and contained a duplicated portion of the promoter sequence “cereal-box” previously suspected as a factor in higher levels of expression. Thus, the “cereal-box” duplication preceeded the origin of hexaploid wheat, and provides no evidence to explain the variations in Bx subunit synthesis levels. One active Bx allele contained a 185-bp insertion that evidently resulted from a transposition event.
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  • 8
    Electronic Resource
    Electronic Resource
    Springer
    De economist 125 (1977), S. 254-263 
    ISSN: 1572-9982
    Source: Springer Online Journal Archives 1860-2000
    Topics: Economics
    Notes: Summary The purpose of this paper is not to answer a question, but to ask one. Why do time series analysts have to skilfully identify and efficiently estimate time series models? This is time consuming and computationally costly, and with the Box-Jenkins approach apparently requires much expertise and experience. A number of criticisms of the standard methodology are made, and some warnings given. Several practical suggestions are proposed; but the article is intended to be constructive and in no way destructive of a very fine technique. It is felt that difficulties and dangers, honestly acknowledged, are that much the easier to overcome or avoid, respectively.
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  • 9
    ISSN: 1435-926X
    Source: Springer Online Journal Archives 1860-2000
    Topics: Mathematics
    Notes: Summary In this paper we give a simple proof of the result that, for any integer,r, given two processes of orderr, one autoregressive and the other moving average but both with the same parameters, then the generalized variance of all ordersk≥2r, for the autoregressive process, is exactly equal to the infinite order generalized variance for the moving average process.
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  • 10
    Electronic Resource
    Electronic Resource
    Springer
    Metrika 25 (1978), S. 241-245 
    ISSN: 1435-926X
    Keywords: Autocorrelation ; Moving average process
    Source: Springer Online Journal Archives 1860-2000
    Topics: Mathematics
    Notes: Summary A very simple deduction of a recently treated inequality is presented and some variations on this proof, drawing together various properties, are discussed. Closure of moving average processes undermultiplication is also mentioned.
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