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  • 1
    Publication Date: 2021-05-19
    Description: The project of "Assessment of different methods of water treatment on decreasing pathogenic bacteria in shrimp hatcheries" achieved by mean of reviewing the effectiveness of various methods on the water treatment to reduce bacterial load of sea water. The project performed in Bandargah region of Bushehr province in order to checking the effect of different methods on the sea water and bacterial population. This project has been done over a year. In this study a total of 138 samples was collected during seven times and was evaluated as well as 7 treatments. In this study, the comparison of the effect of each factors (sand filter, chlorine, ultra violet ray, chlorine combined with ultra violet ray) was analyzed on the sea water by means of disinfection. During this study, other environmental factors such as water temperature, dissolved oxygen, pH and salinity was measured till we can ensure that they don’t have any negative impact on the treatments. Results showed that the density of total bacteria in sea water (Control) was averagely 5187 CFU/ml, this was done while the total density of bacteria in the sea water, reservation pool sample, sand filter water, water that irradiated with ultraviolet rays, chlorinated water and the water that was influenced by both chlorine and ultra violet ray was respectively 5187 2137, 4449 2042, 2782 1335, 1164 692, 143 104, 87 76 CFU/ml. Therefore, reservation pool, sand filter, ultra violet ray, chlorine, chlorine-ultra violet ray each of them was reduce respectively 14, 46, 77, 97, 98 percent of the density of total bacteria or in other words they reduced 0.06, 0.27, 0.65, 1.56, 1.77 log of the total population of bacteria in water. Moreover, the results from the total count of vibrios showed that reservation pool, sand filter, ultra violet ray, chlorine, chlorine-ultra violet ray each of them was reduce respectively 17, 47, 74, 98, 99 percent of the density of total vibrios or in other words they reduced respectively 0.08, 0.27, 0.59, 1.66, and 1.95 log of the total population of vibrios in sea water. Also the bacteria that isolated from each treatment were identified with the use of biochemical methods that totally were includes a wide range of bacteria, the identified vibrios were: Vibrio alginolyticus, V. costicola, V. fischeri, V. fluvialis I, V. fluvialis II, V. harveyi, V. natriegens, V. nigripulchritudo, V. parahaemolyticus, V. plagius I, V. vulnificus, V. anguilarum I, V. campbellii, V. nereis, V. proteolyticus, V. splendidus, and Unknown V. spp. Other identified bacteria belonging to the following genus: Acinetobacter, Aeromonas, Alcaligenes, Bacillus, Borkholderia, Eschricia, Enteroacter, Flavobacterium, Micococcus, Proteus, Pseudomonas, Serratia, Staphaphylococcus, Streptococcus, and Unknown Bacteria spp. By comparing the results, we concluded that the best result was related to treatment that the sea water had been disinfected after the combined effects of chlorine and ultraviolet ray. It was determined that this process in compared with other treatments, had been reduced the total number of bacteria, the total number of Vibrios, the number of sucrose fermentative vibrios, and the number of non-sucrose fermentative vibrios respectively 98, 99, 98, 99 percent. In other words, the number of bacteria was reduced respectively 1.77, 1.94, 1.82, 2.23 log. So in this study, the applied method was introduced as the most effective way of disinfecting sea water. Meanwhile, none of pathogenic bacteria for shrimp including Vibrio harveyi was isolated by using this treatment. Comparing the results showed that the combined effects of chlorine and ultraviolet radiation is the most effective applied method for disinfecting sea water.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Shrimp ; Water treatment ; Sea water ; Bacteria ; Hatchery ; Assessment ; Population ; Temperature ; Dissolved oxygen ; pH ; Salinity
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 84pp.
    Location Call Number Expected Availability
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  • 2
    Publication Date: 2021-05-19
    Description: Nowadays, white spot virus disease is serious threat for breeding and culture industry of shrimp. In this study was increasing resistance of shrimp against white spot virus by using modern methods such as shrimp vaccination with inactivated viruses and recombinant proteins. The aim of this study were determine the growth and survival rates vaccinated and non-vaccinated of Litopenaeus vannamei (5 to 15 and 12 to 26 day), that were challenged with white spot virus in 40 and 60 day rearing. This study consisted two separate groups were vaccinated and non-vaccinated with 11 treatments experimental and each of replicate was stocked 1000 pieces by post larva of 5 to15 and 12 to 26 day. After vaccination, two groups of post larvae exposed to the white spot virus at 40 and 60 day, one groups no exposure to the virus. Samplings were randomly of shrimp in 40, 60 and 80 days 10 pieces each of treatment experimental and measured mean of weight and length. Also, number of deaths was recorded at morning and evening daily and calculated survival rate at the end of study. The results showed growth rate of post larvae vaccinated (5 to15 day) which exposed to white spot virus at 40 and 60 was significantly lower than non-vaccinated of post larval, while the growth rate of post larval exposed to virus in 60 day was significantly increased. On the other hand, growth rate of post larval vaccination (12 to 26 day) exposed to virus in 60 day compared with post larval vaccination (5 to 15 and 12 to 26) exposed to virus in 40 and 60 days was significantly increased. Hence, growth rate was significantly increased in post larval vaccinated (5 to 15 and 12 to 26) which non-exposed to virus. Although the survival rate was post larval vaccinated (12 to 26 days) exposed to virus Post larvae in 60 day higher than post larval were exposed to virus in 40 and 60, but no significant differences were observed. However, relative mortality of post larval vaccination in 12 to 26 day compared with post larval vaccination in 5 to 15 days exposed to virus were significantly lower. Considering growth and survival index was improved of post larval vaccination can be concluded that the optimum age for vaccination against white spot virus of L.vannamei was 12 to 26 day.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: White spot virus ; Litopenaeus vannamei ; Vaccination ; Growth ; Survival rate
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 45pp.
    Location Call Number Expected Availability
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  • 3
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    Unknown
    Iranian Fisheries Science Research Institute | Tehran, Iran
    In:  http://aquaticcommons.org/id/eprint/25373 | 18721 | 2018-09-14 07:27:49 | 25373 | Iranian Fisheries Science Research Institute
    Publication Date: 2021-07-16
    Description: The project of "Assessment of different methods of water treatment on decreasing pathogenic bacteria in shrimp hatcheries" achieved by mean of reviewing the effectiveness of various methods on the water treatment to reduce bacterial load of sea water. The project performed in Bandargah region of Bushehr province in order to checking the effect of different methods on the sea water and bacterial population. This project has been done over a year. In this study a total of 138 samples was collected during seven times and was evaluated as well as 7 treatments. In this study, the comparison of the effect of each factors (sand filter, chlorine, ultra violet ray, chlorine combined with ultra violet ray) was analyzed on the sea water by means of disinfection. During this study, other environmental factors such as water temperature, dissolved oxygen, pH and salinity was measured till we can ensure that they don’t have any negative impact on the treatments. Results showed that the density of total bacteria in sea water (Control) was averagely 5187 CFU/ml, this was done while the total density of bacteria in the sea water, reservation pool sample, sand filter water, water that irradiated with ultraviolet rays, chlorinated water and the water that was influenced by both chlorine and ultra violet ray was respectively 5187 2137, 4449 2042, 2782 1335, 1164 692, 143 104, 87 76 CFU/ml. Therefore, reservation pool, sand filter, ultra violet ray, chlorine, chlorine-ultra violet ray each of them was reduce respectively 14, 46, 77, 97, 98 percent of the density of total bacteria or in other words they reduced 0.06, 0.27, 0.65, 1.56, 1.77 log of the total population of bacteria in water. Moreover, the results from the total count of vibrios showed that reservation pool, sand filter, ultra violet ray, chlorine, chlorine-ultra violet ray each of them was reduce respectively 17, 47, 74, 98, 99 percent of the density of total vibrios or in other words they reduced respectively 0.08, 0.27, 0.59, 1.66, and 1.95 log of the total population of vibrios in sea water. Also the bacteria that isolated from each treatment were identified with the use of biochemical methods that totally were includes a wide range of bacteria, the identified vibrios were: Vibrio alginolyticus, V. costicola, V. fischeri, V. fluvialis I, V. fluvialis II, V. harveyi, V. natriegens, V. nigripulchritudo, V. parahaemolyticus, V. plagius I, V. vulnificus, V. anguilarum I, V. campbellii, V. nereis, V. proteolyticus, V. splendidus, and Unknown V. spp. Other identified bacteria belonging to the following genus: Acinetobacter, Aeromonas, Alcaligenes, Bacillus, Borkholderia, Eschricia, Enteroacter, Flavobacterium, Micococcus, Proteus, Pseudomonas, Serratia, Staphaphylococcus, Streptococcus, and Unknown Bacteria spp. By comparing the results, we concluded that the best result was related to treatment that the sea water had been disinfected after the combined effects of chlorine and ultraviolet ray. It was determined that this process in compared with other treatments, had been reduced the total number of bacteria, the total number of Vibrios, the number of sucrose fermentative vibrios, and the number of non-sucrose fermentative vibrios respectively 98, 99, 98, 99 percent. In other words, the number of bacteria was reduced respectively 1.77, 1.94, 1.82, 2.23 log. So in this study, the applied method was introduced as the most effective way of disinfecting sea water. Meanwhile, none of pathogenic bacteria for shrimp including Vibrio harveyi was isolated by using this treatment. Comparing the results showed that the combined effects of chlorine and ultraviolet radiation is the most effective applied method for disinfecting sea water.
    Keywords: Aquaculture ; Iran ; Bushehr province ; Bandargah region ; Shrimp ; Water treatment ; Sea Dissolved oxygenwater ; Bacteria ; Hatchery ; Assessment ; Population ; Temperature
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
    Format: 84
    Location Call Number Expected Availability
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  • 4
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    Unknown
    Iranian Fisheries Science Research Institute | Tehran, Iran
    In:  http://aquaticcommons.org/id/eprint/25553 | 18721 | 2018-10-05 16:16:38 | 25553 | Iranian Fisheries Science Research Institute
    Publication Date: 2021-07-16
    Description: Nowadays, white spot virus disease is serious threat for breeding and culture industry of shrimp. In this study was increasing resistance of shrimp against white spot virus by using modern methods such as shrimp vaccination with inactivated viruses and recombinant proteins. The aim of this study were determine the growth and survival rates vaccinated and non-vaccinated of Litopenaeus vannamei (5 to 15 and 12 to 26 day), that were challenged with white spot virus in 40 and 60 day rearing. This study consisted two separate groups were vaccinated and non-vaccinated with 11 treatments experimental and each of replicate was stocked 1000 pieces by post larva of 5 to15 and 12 to 26 day. After vaccination, two groups of post larvae exposed to the white spot virus at 40 and 60 day, one groups no exposure to the virus. Samplings were randomly of shrimp in 40, 60 and 80 days 10 pieces each of treatment experimental and measured mean of weight and length. Also, number of deaths was recorded at morning and evening daily and calculated survival rate at the end of study. The results showed growth rate of post larvae vaccinated (5 to15 day) which exposed to white spot virus at 40 and 60 was significantly lower than non-vaccinated of post larval, while the growth rate of post larval exposed to virus in 60 day was significantly increased. On the other hand, growth rate of post larval vaccination (12 to 26 day) exposed to virus in 60 day compared with post larval vaccination (5 to 15 and 12 to 26) exposed to virus in 40 and 60 days was significantly increased. Hence, growth rate was significantly increased in post larval vaccinated (5 to 15 and 12 to 26) which non-exposed to virus. Although the survival rate was post larval vaccinated (12 to 26 days) exposed to virus Post larvae in 60 day higher than post larval were exposed to virus in 40 and 60, but no significant differences were observed. However, relative mortality of post larval vaccination in 12 to 26 day compared with post larval vaccination in 5 to 15 days exposed to virus were significantly lower. Considering growth and survival index was improved of post larval vaccination can be concluded that the optimum age for vaccination against white spot virus of L.vannamei was 12 to 26 day.
    Keywords: Aquaculture ; Iran ; White spot virus ; Litopenaeus vannamei ; Vaccination ; Growth ; Survival rate
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
    Format: 45
    Location Call Number Expected Availability
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  • 5
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    Unknown
    Iranian Fisheries Science Research Institute | Tehran, Iran
    In:  http://aquaticcommons.org/id/eprint/25779 | 18721 | 2018-10-13 08:34:12 | 25779 | Iranian Fisheries Science Research Institute
    Publication Date: 2021-07-16
    Description: Genetic studies and gene banks preparation can identify guidelines for improving diversity and population structure and estimation, poaching and also the amount of cross breeding and provide genetic classification. In this study, sampling was performed from the important studied species habitats areas for the species such as: Dasyatis bennetti، Netuma thalassina, Netuma bilineata Carcharhinus leucas، Choerodon robustus، Pseudorhombus pentophthalmus ،Pseudorhombus arsius Thunnus tonggol ،Euthynnus affinis and Trichiurus lepturus. Total DNA extraction was performed using phenol - chloroform method which is the most common method for DNA extraction in order to achieve high quality of DNA was performed in the preparation of gene bank in this study. After relevant studies on this gene primers were designed and in use. After editing the sequences, nucleotide BLAST (Basic Local Alignment Search Tool) was performed using NCBI blast main page. The sequences obtained from each sample were aligned and corrected from any ambiguities and assembled using Bio edit program .Trees were generated using maximum parsimony (MP), a character-based algorithm and neighbor joining (NJ) a distance-based algorithm for phenetic analysis. The distance matrix option of MEGA4 was used to calculate genetic distance according to the Kimura 2-parameter model of sequence evolution. Based on the results obtained, the optical density of 260 to 280 nm in the samples was recorded between 1/8 - 2, indicating good quality DNA samples. Optimized PCR reaction to 16SrRNA gene amplification using the gradient between 48 - 60° C showed that the most suitable criteria for binding primers, 54 to 58 Celsius degrees respectively. The project objectives including the identification of the genetic structure of the species, and draw the phylogenetic trees using two genes 16SrRNA, making identification and registration of specified computer storage and regulate the structure and management of mentioned species by focus on genetic resources 10 species of majour commercial and noncommercial fishes in the Persia Gulf and Oman Sea through the creation of an integrated network of aquatic genetic resources in the region to try to identify genetic resources and aquatic gene bank. This type of analysis could be considered as an important tool to be used in broodstock selection in breeding programs. Also identify the species of fish named as Pseudorhombus pentophthalmus with a new haplotype and genetic differences 7% in compare to the samples recorded in the World gene Bank can considered as a major achievements of this research.
    Keywords: Biology ; Iran ; Persian Gulf ; Gene Bank ; mtDNA ; Fish ; Marine ; 16S rRNA ; Dasyatis bennetti ; Netuma thalassina ; Netuma bilineata ; Carcharhinus leucas ; Choerodon robustus ; Pseudorhombus pentophthalmus ; Pseudorhombus arsius ; Thunnus tonggol ; Euthynnus affinis ; Trichiurus lepturus ; Species
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
    Format: 66
    Location Call Number Expected Availability
    BibTip Others were also interested in ...
  • 6
    Publication Date: 2021-05-19
    Description: Genetic studies and gene banks preparation can identify guidelines for improving diversity and population structure and estimation, poaching and also the amount of cross breeding and provide genetic classification. In this study, sampling was performed from the important studied species habitats areas for the species such as: Dasyatis bennetti ، Netuma thalassina, Netuma bilineata Carcharhinus leucas ،Choerodon robustus ، Pseudorhombus pentophthalmus ،Pseudorhombus arsius Thunnus tonggol ،Euthynnus affinis and Trichiurus lepturus. Total DNA extraction was performed using phenol - chloroform method which is the most common method for DNA extraction in order to achieve high quality of DNA was performed in the preparation of gene bank in this study. After relevant studies on this gene primers were designed and in use. After editing the sequences, nucleotide BLAST (Basic Local Alignment Search Tool) was performed using NCBI blast main page.The sequences obtained from each sample were aligned and corrected from any ambiguities and assembled using Bio edit program .Trees were generated using maximum parsimony (MP), a character-based algorithm and neighbor joining (NJ) a distance-based algorithm for phenetic analysis. The distance matrix option of MEGA4 was used to calculate genetic distance according to the Kimura 2-parameter model of sequence evolution. Based on the results obtained, the optical density of 260 to 280 nm in the samples was recorded between 1/8 - 2, indicating good quality DNA samples. Optimized PCR reaction to 16SrRNA gene amplification using the gradient between 48 - 60° C showed that the most suitable criteria for binding primers, 54 to 58 Celsius degrees respectively.The project objectives including the identification of the genetic structure of the species, and draw the phylogenetic trees using two genes 16SrRNA, making identification and registration of specified computer storage and regulate the structure and management of mentioned species by focus on genetic resources 10 species of majour commercial and noncommercial fishes in the Persia Gulf and Oman Sea through the creation of an integrated network of aquatic genetic resources in the region to try to identify genetic resources and aquatic gene bank.This type of analysis could be considered as an important tool to be used in broodstock selection in breeding programs. Also identify the species of fish named as Pseudorhombus pentophthalmus with a new haplotype and genetic differences 7% in compare to the samples recorded in the World gene Bank can considered as a major achievements of this research.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Gene Bank ; mtDNA ; Fish ; Marine ; 16S rRNA ; Dasyatis bennetti ; Netuma thalassina ; Netuma bilineata ; Carcharhinus leucas ; Choerodon robustus ; Pseudorhombus pentophthalmus ; Pseudorhombus arsius ; Thunnus tonggol ; Euthynnus affinis ; Trichiurus lepturus ; Species
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 66pp.
    Location Call Number Expected Availability
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