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  • DNA dynamics  (2)
  • Analytical Chemistry and Spectroscopy  (1)
  • Eptatretus  (1)
  • 1
    Electronic Resource
    Electronic Resource
    Springer
    European biophysics journal 17 (1989), S. 221-232 
    ISSN: 1432-1017
    Keywords: Cross relaxation ; DNA dynamics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Physics
    Notes: Abstract The conformations and internal dynamics of the deoxyriboses of d(CGTACG)2 have been determined by NMR measurements at 15°C. The conformations of the sugars were determined using coupling constants and time-dependent NOE measurements. The J-splitting patterns of the H1′, H2′ and H2″ resonances show that the sugars exist as mixtures of conformations near C2′ endo (south) and C3′ endo (north). The population of the south conformation was larger for the purines than for the pyrimidines. The overall tumbling time of the molecule in 2H2O was determined from measurements of the cross relaxation rate constant for the H6-H5 vectors of the two cytosine residues. Order parameters were determined for the H1′-H2″, H2′-H2″ and H2′-H3′ vectors from measurements of cross relaxation rate constants, making use of multi-spin analysis of the NOE build up rates. These order parameters are weakly dependent of the base sequence, and except for the terminal Cyt 1 residue, the H2′-H2″ and H2′-H3′ vectors are near unity, indicating the absence of rapid pseudorotation on the nanosecond time scale. However, the order parameter for the H1′-H2″ vector is significantly smaller than expected for rapid pseudorotation indicating the presence of other motions of the sugars. This motion must be about an effective axis parallel to the H2′-H″ vector, and to occur with an angular fluctuation of about 30°. The results show that to obtain highly refined structures for nucleic acids by NMR the effects of spin diffusion and motional averaging cannot be ignored.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1432-1017
    Keywords: Chemical shift anisotropy ; 31P relaxation ; DNA dynamics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Physics
    Notes: Abstract The five phosphates of the deoxynucleotide d(CpGpTpApCpG)2 have been assigned by two-dimensional heteronuclear NMR spectroscopy. The chemical shift anisotropy and correlation time of each phosphate group has been determined from measurements of the spin-lattice, spin-spin relaxation rate constants and the 31P-{1H} nuclear Overhauser enhancement (NOE) at three magnetic field strengths (4.7 T, 9.4 T, and 11.75 T) and two temperatures (288 K and 298 K). As expected, the relaxation data require two mechanisms to account for the observed rate constants, i.e. dipole-dipole and chemical shift anisotropy. At 9.4 T and 11.75 T, the latter mechanism dominates the relaxation, leading to insignificant NOE intensities. The correlation time, chemical shift anisotropy and effective P-H distance were obtained from least-squares fitting to the data. Comparison of the fitted value for the correlation time with that obtained from 1H measurements shows that the molecule behaves essentially as rigid rotor on the nanosecond timescale. Large amplitude motions observed in long segments of DNA are due to bending motions that do not contribute significantly to relaxation in short oligonucleotides.
    Type of Medium: Electronic Resource
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  • 3
    Electronic Resource
    Electronic Resource
    Springer
    Fish physiology and biochemistry 6 (1989), S. 327-331 
    ISSN: 1573-5168
    Keywords: Eptatretus ; hagfish ; heart ; power ; afterload ; stroke volume ; rate
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The maximum power output of isolated perfused ventricles of the hafish (Eptatretus cirrhatus) averaged 0.367±0.031 mW g−1 (n=9), considerably high than estimates for the heart of the Atlantic hagfish (Myxine glutinosa). Maximal minute volumes averaged 21.55±1.28 ml min−1kg−1, with a mean stroke volume of 0.71±0.14 ml kg−1 body weight, values which are similar to those reported for many teleost and elasmobranch hearts. Ventricular output showed the characteristic dependence upon atrial filling pressure up to an optimum filling pressure ofc. 4 mm Hg. At output pressures exceeding 14 mm Hg the stroke volume and power output fell sharply. At these afterloads, the ventral aorta remained distended following semilunar valve closure and so the volume of fluid ejected on ventricular systole was reduced. There was little change in the frequency of the heart as either input or output pressures were varied.
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    Chichester [u.a.] : Wiley-Blackwell
    Journal of Raman Spectroscopy 12 (1982), S. 36-48 
    ISSN: 0377-0486
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The infrared and Raman spectra of methylviologen (1,1′-dimethyl-4,4′-bipyridine dication, MV2+) have been measured from both the solid dichloride and aqueous solutions. The preresonance behaviour of MV2+ Raman bands showed that the absorption at ˜196 nm is mainly responsible for the resonance scattering process in MV2+. In the region below 1700 cm-1, nine polarized (p˜1/3) resonance Raman bands of the methylviologen radical cation, MV+, were assigned to in-plane ring modes. Arguments are given that the chromophore of MV+ may also partially include the methyl groups. The excitation profiles of the MV+fundamentals, measured with laser wavelengths covering the range 350.6-676.4 nm, reveal three main groups of modes, each behaving differently for the excitation in this range. Modes containing largely ν(C—C) ring contributions are mainly coupled with electronic transitions at ˜395, ˜605 and ˜720 nm and yield simple excitation profiles. Modes involving principally the vibrations of the N+—CH3 group show complicated interference peaks in the whole range of the excitation profiles. γ(CCC) is mainly coupled with the absorption at ˜620 nm. Resonance Raman bands of the (MV+)2 dimer have been characterized through studies of the concentration dependence of the spectra.
    Additional Material: 8 Ill.
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