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  • Alexandrium spp.; Alexandrium tamarense; Alexandrium tamutum; CTD/Rosette; CTD-RO; Date/Time of event; DEPTH, water; Event label; HE209; HE209_S10; HE209_S11; HE209_S12; HE209_S13; HE209_S15; HE209_S2; HE209_S4; HE209_S5; HE209_S6; HE209_S7; Heincke; Latitude of event; Longitude of event; Modified liquid chromatography with fluorescence detection (Yu et al 1998); North Sea; Paralytic shellfish poisoning toxins; Quantitative phytoplankton method (Utermöhl, 1958); Real-time quantitative polymerase chain reaction (qPCR); S10; S11; S12; S13; S15; S2; S4; S5; S6; S7; Sample code/label  (1)
  • Arctic  (1)
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  • 1
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    PANGAEA
    In:  Supplement to: Töbe, Kerstin; Alpermann, Tilman J; Tillmann, Urban; Krock, Bernd; Cembella, Allan; John, Uwe (2013): Molecular discrimination of toxic and non-toxic Alexandrium species (Dinophyta) in natural phytoplankton assemblages from the Scottish coast of the North Sea. European Journal of Phycology, 48(1), 12-26, https://doi.org/10.1080/09670262.2012.752870
    Publication Date: 2024-01-12
    Description: Molecular methods provide promising tools for routine detection and quantification of toxic microalgae in plankton samples. To this end, novel TaqMan minor groove binding probes and primers targeting the small (SSU) or large (LSU) ribosomal subunit (rRNA) were developed for two species of the marine dinoflagellate genus Alexandrium (A. minutum, A. tamutum) and for three groups/ribotypes of the A. tamarense species complex: Group I/North American (NA), Group II/Mediterranean (ME) and Group III/Western European (WE). Primers and probes for real-time quantitative PCR (qPCR) were species-specific and highly efficient when tested in qPCR assays for cross-validation with pure DNA from cultured Alexandrium strains. Suitability of the qPCR assays as molecular tools for the detection and estimation of relative cell abundances of Alexandrium species and groups was evaluated from samples of natural plankton assemblages along the Scottish east coast. The results were compared with inverted microscope cell counts (Utermöhl technique) of Alexandrium spp. and associated paralytic shellfish poisoning (PSP) toxin concentrations. The qPCR assays indicated that A. tamarense (Group I) and A. tamutum were the most abundant Alexandrium taxa and both were highly positively correlated with PSP toxin content of plankton samples. Cells of A. tamarense (Group III) were present at nearly all stations but in low abundance. Alexandrium minutum and A. tamarense (Group II) cells were not detected in any of the samples, thereby arguing for their absence from the specific North Sea region, at least at the time of the survey. The sympatric occurrence of A. tamarense Group I and Group III gives further support to the hypothesis that the groups/ribotypes of the A. tamarense species complex are cryptic species rather than variants belonging to the same species.
    Keywords: Alexandrium spp.; Alexandrium tamarense; Alexandrium tamutum; CTD/Rosette; CTD-RO; Date/Time of event; DEPTH, water; Event label; HE209; HE209_S10; HE209_S11; HE209_S12; HE209_S13; HE209_S15; HE209_S2; HE209_S4; HE209_S5; HE209_S6; HE209_S7; Heincke; Latitude of event; Longitude of event; Modified liquid chromatography with fluorescence detection (Yu et al 1998); North Sea; Paralytic shellfish poisoning toxins; Quantitative phytoplankton method (Utermöhl, 1958); Real-time quantitative polymerase chain reaction (qPCR); S10; S11; S12; S13; S15; S2; S4; S5; S6; S7; Sample code/label
    Type: Dataset
    Format: text/tab-separated-values, 404 data points
    Location Call Number Expected Availability
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  • 2
    Publication Date: 2022-05-25
    Description: Author Posting. © The Author(s), 2016. This is the author's version of the work. It is posted here by permission of Inter-Research for personal use, not for redistribution. The definitive version was published in Marine Ecology Progress Series 547 (2016): 33-46, doi:10.3354/meps11660.
    Description: The bloom-forming dinoflagellate Alexandrium fundyense has been extensively studied due its toxin-producing capabilities and consequent impacts to human health and economies. This study investigated the prevalence of resting cysts of A. fundyense in western Greenland and Iceland to assess the historical presence and magnitude of bloom populations in the region, and to characterize environmental conditions during summer, when bloom development may occur. Analysis of sediments collected from these locations showed that Alexandrium cysts were present at low to moderate densities in most areas surveyed, with highest densities observed in western Iceland. Additionally, laboratory experiments were conducted on clonal cultures established from isolated cysts or vegetative cells from Greenland, Iceland, and the Chukchi Sea (near Alaska) to examine the effects of photoperiod interval and irradiance levels on growth. Growth rates in response to the experimental treatments varied among isolates, but were generally highest under conditions that included both the shortest photoperiod interval (16h:8h light:dark) and higher irradiance levels (~146-366 µmol photons m-2 s-1), followed by growth under an extended photoperiod interval and low irradiance level (~37 µmol photons m-2 s-1). Based on field and laboratory data, we hypothesize that blooms in Greenland are primarily derived from advected Alexandrium populations, as low bottom temperatures and limited light availability would likely preclude in situ bloom development. In contrast, the bays and fjords in Iceland may provide more favorable habitat for germling cell survival and growth, and therefore may support indigenous, self-seeding blooms.
    Description: Funding for this study was provided by the James M. and Ruth P. Clark Arctic Research Initiative to Anderson and Richlen, and for the ARCHEMHAB expedition via the Helmholtz Institute initiative Earth and Environment under the PACES Program Topic 2 Coast (Workpackage 3) of the Alfred Wegener Institute. Additional support was provided by the Woods Hole Center for Oceans and Human Health through National Science Foundation (NSF) Grant OCE-1314642 and National Institute of Environmental Health Sciences (NIEHS) Grant 1-P01-ES021923-01.
    Description: 2017-04-07
    Keywords: Arctic ; Alexandrium ; Dinoflagellate ; Cysts ; Harmful algal bloom
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
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