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  • AWI_Envi; DATE/TIME; Depth, bottom/max; DEPTH, ice/snow; Depth, top/min; East Greenland Ice-core Project; EastGRIP; EGRIP; Greenland; ICEDRILL; Ice drill; Mass spectrometer; MSPEC; Polar Terrestrial Environmental Systems @ AWI; Signals from the Surface Snow: Post-Depositional Processes Controlling the Ice Core Isotopic Fingerprint; snow-air-exchange; SNOWISO; stable water isotopes; surface transect; δ18O, water; δ Deuterium, water  (4)
  • ANT-XXIII/6; AWI_BioOce; Biological Oceanography @ AWI; DIVER; Euphausia superba, larvae, carbon; Euphausia superba, larvae, dry mass; Euphausia superba, larvae, length; Euphausia superba, larvae, lipid; Euphausia superba, larvae, nitrogen; Euphausia superba, larvae, protein; Polarstern; PS69; PS69/498-A; Sampling by diver  (3)
  • Actiniaria sp.; Amblyraja hyperborea; Ascidiacea; Asteroidea spp.; Autonomous underwater vehicle; AUV; AUV Imagery; Bythocaris spp.; Deep-sea Sponge Grounds Ecosystems of the North Atlantic; Demospongiae indeterminata; Depth, bathymetric; Frame height; G. O. Sars (2003); Geodia parva; Gersemia rubiformis; GS16A-202; GS2016109A; GS2016109A-30-AUV-03; Height above sea floor/altitude; Hemigellius sp.; Hexactinellida; Hexadella dedritifera; Identification; Image area; LATITUDE; Lissodendoryx complicata; LONGITUDE; Macrourus berglax; Polymastia thielei; Quadrat area; Reinhardtius hippoglossoides; Schultz Bank; Solaster spp.; Sponges; SponGES; Stelletta rhaphidiophora; Strongylocentrotus sp.; Stylocordyla borealis; Tylaster willei  (2)
  • Baltic Sea; Local adaptation; population genomics; three-spined stickleback; VCF; Whole genome sequencing  (2)
  • PANGAEA  (11)
  • BioMed Central
Collection
Keywords
Publisher
  • PANGAEA  (11)
  • BioMed Central
Years
  • 1
    Publication Date: 2023-01-13
    Description: This vcf file is generated from genomic data of three-spined sticklebacks from Kiel (KIE), Germany and Nynäshamn (NYN), Sweden. The individuals from Kiel are S3, S4, S19, S20, S33, S34, S47, S48, S49, S50, S63, S64, S77, S78, S89, S90. The individuals from NYN are S5, S6, S21, S22, S35, S36, S37, S38, S51, S52, S65, S66, S79, S80, S85, S86. It contains high quality biallelic positions (GQ=20) and is filtered for minor allele frequencies of maf = 0.05, allows 40 % of missing data (13 individuals) and a read depth of 〉=5. Further this vcf file is subset to the inducible differentially methylated sites (DMS) (198sites) in decreasing PSU (_6PSU) with 5 kilobases (kb) before and after DMS. With this file further calculations were performed to estimate the genetic differentiation (i.e. Fst) between the different populations (see manuscript indicated below).
    Keywords: Baltic Sea; Local adaptation; population genomics; three-spined stickleback; VCF; Whole genome sequencing
    Type: Dataset
    Format: application/zip, 1.6 MBytes
    Location Call Number Expected Availability
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  • 2
    Publication Date: 2023-01-13
    Description: This vcf file is generated from genomic data of three-spined sticklebacks from Kiel (KIE) and Sylt (SYL), Germany. The individuals from Kiel are S3, S4, S19, S20, S33, S34, S47, S48, S49, S50, S63, S64, S77, S78, S89, S90. The individuals from SYL are S9, S10, S17, S18, S31, S32, S45, S46, S59, S60, S61, S62, S73, S74, S87, S88. It contains high quality biallelic positions (GQ=20) and is filtered for minor allele frequencies of maf = 0.05, allows 40 % of missing data (13 individuals) and a read depth of 〉=5. Further this vcf file is subset to the inducible differentially methylated sites (DMS) (148sites) in increasing PSU (_33PSU) with 5 kilobases (kb) before and after DMS. With this file further calculations were performed to estimate the genetic differentiation (i.e. Fst) between the different populations (see manuscript indicated below).
    Keywords: Baltic Sea; Local adaptation; population genomics; three-spined stickleback; VCF; Whole genome sequencing
    Type: Dataset
    Format: application/zip, 1.2 MBytes
    Location Call Number Expected Availability
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  • 3
    Publication Date: 2023-07-10
    Keywords: Actiniaria sp.; Amblyraja hyperborea; Ascidiacea; Asteroidea spp.; Autonomous underwater vehicle; AUV; AUV Imagery; Bythocaris spp.; Deep-sea Sponge Grounds Ecosystems of the North Atlantic; Demospongiae indeterminata; Depth, bathymetric; Frame height; G. O. Sars (2003); Geodia parva; Gersemia rubiformis; GS16A-202; GS2016109A; GS2016109A-30-AUV-03; Height above sea floor/altitude; Hemigellius sp.; Hexactinellida; Hexadella dedritifera; Identification; Image area; LATITUDE; Lissodendoryx complicata; LONGITUDE; Macrourus berglax; Polymastia thielei; Quadrat area; Reinhardtius hippoglossoides; Schultz Bank; Solaster spp.; Sponges; SponGES; Stelletta rhaphidiophora; Strongylocentrotus sp.; Stylocordyla borealis; Tylaster willei
    Type: Dataset
    Format: text/tab-separated-values, 11610 data points
    Location Call Number Expected Availability
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  • 4
    Publication Date: 2023-07-10
    Keywords: Actiniaria sp.; Amblyraja hyperborea; Ascidiacea; Asteroidea spp.; Autonomous underwater vehicle; AUV; AUV Imagery; Bythocaris spp.; Deep-sea Sponge Grounds Ecosystems of the North Atlantic; Demospongiae indeterminata; Depth, bathymetric; Frame height; G. O. Sars (2003); Geodia parva; Gersemia rubiformis; GS16A-202; GS2016109A; GS2016109A-30-AUV-03; Height above sea floor/altitude; Hemigellius sp.; Hexactinellida; Hexadella dedritifera; Identification; Image area; LATITUDE; Lissodendoryx complicata; LONGITUDE; Macrourus berglax; Polymastia thielei; Quadrat area; Reinhardtius hippoglossoides; Schultz Bank; Solaster spp.; Sponges; SponGES; Stelletta rhaphidiophora; Strongylocentrotus sp.; Stylocordyla borealis; Tylaster willei
    Type: Dataset
    Format: text/tab-separated-values, 11610 data points
    Location Call Number Expected Availability
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  • 5
    Publication Date: 2024-04-02
    Description: Snow samples were taken on a daily basis along a 100 m wind-parallel transect at the EastGRIP ice core deep drilling site. The snow was collected in the morning at 11 positions with 10 m spacing into four cumulative samples – each for one depth interval. The depth intervals are top 0.5 cm , top 1 cm , top 2 cm and top 5 cm . Each day, undisturbed snow was sampled and the exact sample location marked to avoid sampling disturbed snow during the next sampling event. The samples were shipped frozen to the Alfred-Wegener-Institut and stored at -25°C. Prior to measurements the samples were melted in the sample bags at room temperature. For the measurement of the isotopic composition the instruments Picarro L2120-i and Picarro L2140-i were used. The measurement set-up followed the Van-Geldern Protocol. Each sample was injected four times and the standard deviation is computed. We calculate the average over all the standard deviations as a measure of uncertainty. We find this average to be 0.01 permil for δ18O (with stdev 0.01) and 0.08 permil for δD (stdev 0.1). The maximum standard deviation within the data set was found to be 0.07 for δ18O and 0.9 for δD. As a measure of accuracy the off-set between the defined and measured value of the quality check standard for each measurement run is provided. We calculate the average of this off-set for the whole data set and obtain a value of -0.06 permil for δ18O (stdev 0.02) and -0.69 permil for δD (stdev 0.18). The maximum off-set found within the data set was -0.1 permil for δ18O and -1.12 permil for δD.
    Keywords: AWI_Envi; DATE/TIME; Depth, bottom/max; DEPTH, ice/snow; Depth, top/min; East Greenland Ice-core Project; EastGRIP; EGRIP; Greenland; ICEDRILL; Ice drill; Mass spectrometer; MSPEC; Polar Terrestrial Environmental Systems @ AWI; Signals from the Surface Snow: Post-Depositional Processes Controlling the Ice Core Isotopic Fingerprint; snow-air-exchange; SNOWISO; stable water isotopes; surface transect; δ18O, water; δ Deuterium, water
    Type: Dataset
    Format: text/tab-separated-values, 312 data points
    Location Call Number Expected Availability
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  • 6
    Publication Date: 2024-04-02
    Description: Snow samples were taken on a daily basis along a 100 m wind-parallel transect at the EastGRIP ice core deep drilling site. The snow was collected in the morning at 11 positions with 10 m spacing into four cumulative samples – each for one depth interval. The depth intervals are top 0.5 cm , top 1 cm , top 2 cm and top 5 cm . Each day, undisturbed snow was sampled and the exact sample location marked to avoid sampling disturbed snow during the next sampling event. The samples were shipped frozen to the Alfred-Wegener-Institut and stored at -25°C. Prior to measurements the samples were melted in the sample bags at room temperature. For the measurement of the isotopic composition the instruments Picarro L2120-i and Picarro L2140-i were used. The measurement set-up followed the Van-Geldern Protocol. Each sample was injected four times and the standard deviation is computed. We calculate the average over all the standard deviations as a measure of uncertainty. We find this average to be 0.01 permil for δ18O (with stdev 0.01) and 0.08 permil for δD (stdev 0.1). The maximum standard deviation within the data set was found to be 0.07 for δ18O and 0.9 for δD. As a measure of accuracy the off-set between the defined and measured value of the quality check standard for each measurement run is provided. We calculate the average of this off-set for the whole data set and obtain a value of -0.06 permil for δ18O (stdev 0.02) and -0.69 permil for δD (stdev 0.18). The maximum off-set found within the data set was -0.1 permil for δ18O and -1.12 permil for δD.
    Keywords: AWI_Envi; DATE/TIME; Depth, bottom/max; DEPTH, ice/snow; Depth, top/min; East Greenland Ice-core Project; EastGRIP; EGRIP; Greenland; ICEDRILL; Ice drill; Mass spectrometer; MSPEC; Polar Terrestrial Environmental Systems @ AWI; Signals from the Surface Snow: Post-Depositional Processes Controlling the Ice Core Isotopic Fingerprint; snow-air-exchange; SNOWISO; stable water isotopes; surface transect; δ18O, water; δ Deuterium, water
    Type: Dataset
    Format: text/tab-separated-values, 312 data points
    Location Call Number Expected Availability
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  • 7
    Publication Date: 2024-04-02
    Description: Snow samples were taken on a daily basis along a 100 m wind-parallel transect at the EastGRIP ice core deep drilling site. The snow was collected in the morning at 11 positions with 10 m spacing into four cumulative samples – each for one depth interval. The depth intervals are top 0.5 cm , top 1 cm , top 2 cm and top 5 cm . Each day, undisturbed snow was sampled and the exact sample location marked to avoid sampling disturbed snow during the next sampling event. The samples were shipped frozen to the Alfred-Wegener-Institut and stored at -25°C. Prior to measurements the samples were melted in the sample bags at room temperature. For the measurement of the isotopic composition the instruments Picarro L2120-i and Picarro L2140-i were used. The measurement set-up followed the Van-Geldern Protocol. Each sample was injected four times and the standard deviation is computed. We calculate the average over all the standard deviations as a measure of uncertainty. We find this average to be 0.01 permil for δ18O (with stdev 0.01) and 0.08 permil for δD (stdev 0.1). The maximum standard deviation within the data set was found to be 0.07 for δ18O and 0.9 for δD. As a measure of accuracy the off-set between the defined and measured value of the quality check standard for each measurement run is provided. We calculate the average of this off-set for the whole data set and obtain a value of -0.06 permil for δ18O (stdev 0.02) and -0.69 permil for δD (stdev 0.18). The maximum off-set found within the data set was -0.1 permil for δ18O and -1.12 permil for δD.
    Keywords: AWI_Envi; DATE/TIME; Depth, bottom/max; DEPTH, ice/snow; Depth, top/min; East Greenland Ice-core Project; EastGRIP; EGRIP; Greenland; ICEDRILL; Ice drill; Mass spectrometer; MSPEC; Polar Terrestrial Environmental Systems @ AWI; Signals from the Surface Snow: Post-Depositional Processes Controlling the Ice Core Isotopic Fingerprint; snow-air-exchange; SNOWISO; stable water isotopes; surface transect; δ18O, water; δ Deuterium, water
    Type: Dataset
    Format: text/tab-separated-values, 312 data points
    Location Call Number Expected Availability
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  • 8
    Publication Date: 2024-04-02
    Description: Snow samples were taken on a daily basis along a 100 m wind-parallel transect at the EastGRIP ice core deep drilling site. The snow was collected in the morning at 11 positions with 10 m spacing into four cumulative samples – each for one depth interval. The depth intervals are top 0.5 cm , top 1 cm , top 2 cm and top 5 cm . Each day, undisturbed snow was sampled and the exact sample location marked to avoid sampling disturbed snow during the next sampling event. The samples were shipped frozen to the Alfred-Wegener-Institut and stored at -25°C. Prior to measurements the samples were melted in the sample bags at room temperature. For the measurement of the isotopic composition the instruments Picarro L2120-i and Picarro L2140-i were used. The measurement set-up followed the Van-Geldern Protocol. Each sample was injected four times and the standard deviation is computed. We calculate the average over all the standard deviations as a measure of uncertainty. We find this average to be 0.01 permil for δ18O (with stdev 0.01) and 0.08 permil for δD (stdev 0.1). The maximum standard deviation within the data set was found to be 0.07 for δ18O and 0.9 for δD. As a measure of accuracy the off-set between the defined and measured value of the quality check standard for each measurement run is provided. We calculate the average of this off-set for the whole data set and obtain a value of -0.06 permil for δ18O (stdev 0.02) and -0.69 permil for δD (stdev 0.18). The maximum off-set found within the data set was -0.1 permil for δ18O and -1.12 permil for δD.
    Keywords: AWI_Envi; DATE/TIME; Depth, bottom/max; DEPTH, ice/snow; Depth, top/min; East Greenland Ice-core Project; EastGRIP; EGRIP; Greenland; ICEDRILL; Ice drill; Mass spectrometer; MSPEC; Polar Terrestrial Environmental Systems @ AWI; Signals from the Surface Snow: Post-Depositional Processes Controlling the Ice Core Isotopic Fingerprint; snow-air-exchange; SNOWISO; stable water isotopes; surface transect; δ18O, water; δ Deuterium, water
    Type: Dataset
    Format: text/tab-separated-values, 312 data points
    Location Call Number Expected Availability
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  • 9
    Publication Date: 2024-04-13
    Keywords: ANT-XXIII/6; AWI_BioOce; Biological Oceanography @ AWI; DIVER; Euphausia superba, larvae, carbon; Euphausia superba, larvae, dry mass; Euphausia superba, larvae, length; Euphausia superba, larvae, lipid; Euphausia superba, larvae, nitrogen; Euphausia superba, larvae, protein; Polarstern; PS69; PS69/498-A; Sampling by diver
    Type: Dataset
    Format: text/tab-separated-values, 60 data points
    Location Call Number Expected Availability
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  • 10
    Publication Date: 2024-04-13
    Keywords: ANT-XXIII/6; AWI_BioOce; Biological Oceanography @ AWI; DIVER; Euphausia superba, larvae, carbon; Euphausia superba, larvae, dry mass; Euphausia superba, larvae, length; Euphausia superba, larvae, lipid; Euphausia superba, larvae, nitrogen; Euphausia superba, larvae, protein; Polarstern; PS69; PS69/498-A; Sampling by diver
    Type: Dataset
    Format: text/tab-separated-values, 96 data points
    Location Call Number Expected Availability
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