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  • Springer  (78)
  • American Association for the Advancement of Science  (5)
  • Molecular Diversity Preservation International (MDPI)
  • 1995-1999  (59)
  • 1985-1989  (24)
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  • 1
    ISSN: 0948-5023
    Keywords: γ-turn ; Peptidomimetics ; Similarity indices
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The ability of a series of structures to mimic the geometric and electronic properties of an ideal γ–turn has been studied. Initially, an exhaustive conformational analysis was carried out using the molecular dynamics technique at high temperature followed by minimization. Additionally, each minimum was optimized with the semi–ab initio molecular orbital method SAM1. Then, the unique minima found have been superimposed with ideal γ–turns, classic and inverse, using the SEAL program which takes into account steric and electronic parameters for the superpositions and finally, three molecular similarity indices were determined for each superposition. These indices consider the general steric and electronic characteristics of the structures, as well as, the position of the carbon atoms that correspond to the Cαi and Cαi+2 in the peptide chain.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1573-3904
    Keywords: Restricted NT8−13 analogues ; Molecular modeling ; Diastereomeric 3-oxoindolizidine building blocks ; Affinity for brain NT receptors
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary In order to enforce different spatial orientations in the C-terminal hexapeptide of neurotensin (NT8−13) and to gain information about the importance of the 10–11 peptide bond for binding to NT receptors, the Pro10-Tyr11 fragment has been replaced with (2R,8S,8aR)-, (2S,8S,8aR)-, (2S,8S,8aS)-, (2S,8R,8aS)- and (2R,8R,8aS)-8-amino-2-benzyl-3-oxoindolizidine-2-carboxylic acid. Molecular dynamics calculations and energy minimization studies have shown that, contrarily to the Pro-Tyr moiety, none of these indolizidines display a tendency to adopt type I and III β-turns, but those having (8S,8aR) or (8R,8aS) stereochemistry essentially adopt extended conformations and the (8S,8aS) stereoisomer prefers a nonstandard folding. The four diastereomeric NT8−13 analogues incorporating (8S,8aR) or (8R,8aS) indolizidines displayed binding affinities for the brain NT receptor similar to that of [Ala11]-NT8−13 and only five- to ninefold lower than that of the corresponding analogue, [Phe11]NT8−13. Although this slight decrease could be attributed to differences in conformational behavior between these constrained NT8−13 analogues and [Phe11]NT8−13 or NT8−13, it is not clear whether the β-turn around Pro10-AA11 (AA=Phe, Tyr) is conserved upon receptor binding. An excessive restriction in the motions of the aromatic side chain, imposed by the highly steric constraint of the indolizidine moiety, emerges as an alternative explanation. The findings reported here demonstrate the possibility of replacing the Pro10-Tyr11 dipeptide in NT8−13 with a non-peptide residue without affecting considerably the affinity for brain NT receptors.
    Type of Medium: Electronic Resource
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  • 3
    Publication Date: 1996-03-01
    Print ISSN: 1610-2940
    Electronic ISSN: 0948-5023
    Topics: Chemistry and Pharmacology
    Published by Springer
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  • 4
    Publication Date: 1996-03-01
    Print ISSN: 1610-2940
    Electronic ISSN: 0948-5023
    Topics: Chemistry and Pharmacology
    Published by Springer
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  • 5
    ISSN: 1572-8927
    Keywords: Sodium hexyl sulfate ; sodium octyl sulfate ; sodium decyl sulfate ; sodium dodecyl sulfate ; formamide ; hexanol ; surface tension ; apparent molar volume ; apparent molar heat capacity
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract Density measurements of sodium dodecyl sulfate (SDS), sodium decyl sulfate (SDeS), sodium octyl sulfate(SOS), and sodium hexyl sulfate(SHS) in formamide (FA) as functions of the surfactant concentrations were carried out at 25°C. For SDS in FA, additional density measurements at 35 and 60°C and surface tension and specific heat capacity measurements at 25°C were also performed. From density and specific heat capacity data, the apparent molar volume and heat capacity of the surfactants as functions of concentration were calculated. The surface excess of SDS at the solution–air interface was also determined from the surface tension measurements using the Gibbs adsorption equation. Under our experimental conditions, none of the experimental results evidence micelle formation. In addition, volumetric studies of the hexanol–SDS–FA ternary system at 25°C evidence only interactions between the dispersed surfactant and alcohol.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    Springer
    Coral reefs 5 (1987), S. 197-200 
    ISSN: 1432-0975
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Geosciences
    Notes: Abstract The effects of substratum on the growth of Terpios was demonstrated using experimental and observational data at Guam, Mariana Islands. Terpios growth was measured on live coral, reef rock, and red calcareous algae in the field. In addition, Terpios was transplanted onto live coral, air-blasted (clean) coral, reef rock, and plexiglass plates, and subsequent growth measured. Terpios grows fastest on clean substrata followed by live coral, reef rock and red calcareous algae in decreasing order. Terpios is sometimes overgrown by Montipora, Porites and red calcareous algae. Since Terpios grows fastest when living coral tissue is removed, it is not likely that Terpios ingests coral tissue as previously suggested in the literature. Instead, Terpios is probably an efficient competitor of corals for space. Terpios overgrows most hard, stable reef substrata, and the growth rate on all sample substrata is substantial. Therefore Terpios has a great potential for covering a reef and may be one of the most important causes of disturbance on some coral reefs.
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  • 7
    ISSN: 1432-0983
    Keywords: Yest ; ATPase ; Galactose promoter ; Plasma membrane
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary In order to probe the physiological role of the yeast plasma membrane ATPase we have replaced the constitutive promoter of its gene by a galactose-dependent promoter. The resulting cells stop growing on glucose medium when the preformed ATPase is diluted to 20% of normal. There is a correlation between ATPase activity and both proton efflux from the cells and amino acid transport. A large proportion of growth-arrested cells appear enlarged and with several buds containing nuclei.
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  • 8
    ISSN: 1432-1432
    Keywords: Key words: Lateral gene transfer — UDP-glucose dehydrogenase — Capsular polysaccharides — Pneumococcus
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract. Capsular polysaccharides are important virulence factors both in Gram-positive and Gram-negative bacteria. A similar cluster organization of the genes involved in the synthesis of bacterial exopolysaccharides has been postulated in both cases, suggesting that these clusters evolved by module assembly. Horizontal gene transfer has been postulated to explain the polymorphism found in these cellular polymers. The cap1K and cap3A genes coding for the pneumococcal type 1 and type 3 UDP-glucose dehydrogenases, respectively, have been compared with other UDP-sugar dehydrogenases. We have observed that the evolutionary distance between Cap1K and Cap3A is approximately equal to that found between Cap1K (or Cap3A) and other UDP-GlcDH of families evolutionarily distant like KfiD, the dehydrogenase from Escherichia coli K5. On the basis of comparisons of G + C content, patterns of synonymous and nonsynonymous substitutions, dinucleotide frequencies, and codon usage bias, we conclude that the kfiD gene has been introduced into E. coli from an exogenous source, probably from a streptococcal species.
    Type of Medium: Electronic Resource
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  • 9
    ISSN: 1436-5073
    Keywords: room-temperature phosphorescence ; micelles ; aluminum ; ferron ; metal chelate-triplet state
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract The characteristics of the decay of the triplet state of metal chelates have been investigated in micellar media using room temperature phosphorescence (RTP) measurements of the Al-ferron (7-iodo-8-hydroxyquinoline-5-sulfonic acid) complex in cetyltrimethylammonium bromide (CTAB) micelles. Applications of such decay measurements include discrimination between metal complex species and evaluation of the stoichiometry of phosphorescent metal chelates. A thorough study of the effect of foreign ions (interferences) on the photochemical characteristics of RTP of the aluminum complex leads to a tentative classification of foreign cations. Results are compared with those for the Nb(V)-ferron phosphorescent complex in CTAB micelles and possible reaction mechanisms in the presence of micellar media are outlined in an effort to contribute to basic knowledge of micelle stabilized RTP of such inorganic ions.
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  • 10
    ISSN: 1436-5073
    Keywords: vitamin B12 (cyanocobalamin) ; competitive binding assays ; enzyme-vitamin conjugates ; vitamin tablet analyses
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Abstract A new solid-phase enzyme-linked competitive binding assay for vitamin B12 (cyanocobalamin) is described. The assay is based on the competition between analyte B12 molecules and a glucose-6-phosphate dehydrogenase-vitamin B12 conjugate for a limited number of R-protein binding sites immobilized on sepharose particles. After appropriate incubation and washing steps, the enzyme activity bound to the solid-phase is inversely related to the concentration of B12 in the sample. Under optimized conditions, the method can detect B12 in the range of 3×10−10−1×10−8 M (using 100μl sample) with high selectivity over other biological molecules.
    Type of Medium: Electronic Resource
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