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  • **45Ca incorporation; Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Benthic animals; Benthos; Bicarbonate ion; Bicarbonate ion, standard deviation; Calcification/Dissolution; Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, partial pressure, standard deviation; Carbon dioxide, standard deviation; Cladocora caespitosa; Cnidaria; CO2 vent; Coast and continental shelf; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Field experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gross calcification rate of calcium carbonate; Identification; Measured; Mediterranean Sea Acidification in a Changing Climate; MedSeA; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Salinity; Single species; Species; Temperate; Temperature; Temperature, standard deviation; Temperature, water  (1)
  • Acidification  (1)
  • Acropora millepora; Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Benthic animals; Benthos; Bicarbonate ion; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gene expression; Gene expression, fold change, relative; Gene expression (incl. proteomics); Gene name; Genetic sequence; Identification; Laboratory experiment; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Potentiometric; Replicates; Salinity; Single species; South Pacific; Species; Temperature, water; Temperature, water, standard deviation; Treatment; Tropical  (1)
  • Algae species; Aquarium number; Aristotle's lantern length/test diameter ratio; Asnaghi-etal_2013; Carbon dioxide, partial pressure; EXP; Experiment; Mediterranean Sea; Replicate  (1)
  • Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Bicarbonate ion; Calcite saturation state; Calculated using CO2 1.1 (M. Frankignoulle); Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chlorophyll a; Chlorophyll a, standard deviation; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Experiment day; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Identification; Laboratory experiment; Mollusca; Mytilus edulis; Mytilus edulis, D-larvae hatching rate success; Mytilus edulis, D-larvae hatching rate success, standard deviation; Mytilus edulis, D-larvae shell length; Mytilus edulis, D-larvae shell length, standard deviation; Mytilus edulis, shell length; Mytilus edulis, shell length, standard deviation; Mytilus edulis, shell thickness; Mytilus edulis, shell thickness, standard deviation; Mytilus edulis, standard deviation; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Oxygen, standard deviation; Oxygen saturation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; pH meter (Metrohm electrodes); Reproduction; Salinity; Salinity, standard deviation; Single species; Temperate; Temperature, standard deviation; Temperature, water; Zooplankton  (1)
  • 2010-2014  (5)
Collection
Keywords
Years
  • 2010-2014  (5)
Year
  • 1
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2007. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 34 (2007): L18608, doi:10.1029/2006GL027288.
    Keywords: Carbon dioxide ; Acidification ; Ocean pH
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
    Location Call Number Expected Availability
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  • 2
    Publication Date: 2023-08-28
    Keywords: Algae species; Aquarium number; Aristotle's lantern length/test diameter ratio; Asnaghi-etal_2013; Carbon dioxide, partial pressure; EXP; Experiment; Mediterranean Sea; Replicate
    Type: Dataset
    Format: text/tab-separated-values, 120 data points
    Location Call Number Expected Availability
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  • 3
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    PANGAEA
    In:  Supplement to: Moya, Aurélie; Huisman, L; Ball, E E; Hayward, D C; Grasso, L C; Chua, C M; Woo, H N; Gattuso, Jean-Pierre; Forêt, S; Miller, David J (2012): Whole transcriptome analysis of the coral Acropora millepora reveals complex responses to CO2-driven acidification during the initiation of calcification. Molecular Ecology, 21(10), 2440-2454, https://doi.org/10.1111/j.1365-294X.2012.05554.x
    Publication Date: 2024-03-15
    Description: The impact of ocean acidification (OA) on coral calcification, a subject of intense current interest, is poorly understood in part because of the presence of symbionts in adult corals. Early life history stages of Acropora spp. provide an opportunity to study the effects of elevated CO(2) on coral calcification without the complication of symbiont metabolism. Therefore, we used the Illumina RNAseq approach to study the effects of acute exposure to elevated CO(2) on gene expression in primary polyps of Acropora millepora, using as reference a novel comprehensive transcriptome assembly developed for this study. Gene ontology analysis of this whole transcriptome data set indicated that CO(2) -driven acidification strongly suppressed metabolism but enhanced extracellular organic matrix synthesis, whereas targeted analyses revealed complex effects on genes implicated in calcification. Unexpectedly, expression of most ion transport proteins was unaffected, while many membrane-associated or secreted carbonic anhydrases were expressed at lower levels. The most dramatic effect of CO(2) -driven acidification, however, was on genes encoding candidate and known components of the skeletal organic matrix that controls CaCO(3) deposition. The skeletal organic matrix effects included elevated expression of adult-type galaxins and some secreted acidic proteins, but down-regulation of other galaxins, secreted acidic proteins, SCRiPs and other coral-specific genes, suggesting specialized roles for the members of these protein families and complex impacts of OA on mineral deposition. This study is the first exhaustive exploration of the transcriptomic response of a scleractinian coral to acidification and provides an unbiased perspective on its effects during the early stages of calcification.
    Keywords: Acropora millepora; Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Benthic animals; Benthos; Bicarbonate ion; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gene expression; Gene expression, fold change, relative; Gene expression (incl. proteomics); Gene name; Genetic sequence; Identification; Laboratory experiment; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Potentiometric; Replicates; Salinity; Single species; South Pacific; Species; Temperature, water; Temperature, water, standard deviation; Treatment; Tropical
    Type: Dataset
    Format: text/tab-separated-values, 2489 data points
    Location Call Number Expected Availability
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  • 4
    Publication Date: 2024-03-15
    Keywords: **45Ca incorporation; Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Animalia; Aragonite saturation state; Aragonite saturation state, standard deviation; Benthic animals; Benthos; Bicarbonate ion; Bicarbonate ion, standard deviation; Calcification/Dissolution; Calcite saturation state; Calcite saturation state, standard deviation; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, partial pressure, standard deviation; Carbon dioxide, standard deviation; Cladocora caespitosa; Cnidaria; CO2 vent; Coast and continental shelf; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Field experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gross calcification rate of calcium carbonate; Identification; Measured; Mediterranean Sea Acidification in a Changing Climate; MedSeA; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Salinity; Single species; Species; Temperate; Temperature; Temperature, standard deviation; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 1584 data points
    Location Call Number Expected Availability
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  • 5
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    Unknown
    PANGAEA
    In:  Supplement to: Gazeau, Frédéric; Gattuso, Jean-Pierre; Dawber, Caroline F; Pronker, A E; Peene, F; Peene, J; Heip, Carlo H R; Middelburg, Jack J (2010): Effect of ocean acidification on the early life stages of the blue mussel Mytilus edulis. Biogeosciences, 7(7), 2051-2060, https://doi.org/10.5194/bg-7-2051-2010
    Publication Date: 2024-03-15
    Description: Several experiments have shown a decrease of growth and calcification of organisms at decreased pH levels. There is a growing interest to focus on early life stages that are believed to be more sensitive to environmental disturbances such as hypercapnia. Here, we present experimental data, acquired in a commercial hatchery, demonstrating that the growth of planktonic mussel (Mytilus edulis) larvae is significantly affected by a decrease of pH to a level expected for the end of the century. Even though there was no significant effect of a 0.25-0.34 pH unit decrease on hatching and mortality rates during the first 2 days of development nor during the following 13-day period prior to settlement, final shells were respectively 4.5±1.3 and 6.0±2.3% smaller at pHNBS~7.8 (pCO2~1100-1200 µatm) than at a control pHNBS of ~8.1 (pCO2~460-640 µatm). Moreover, a decrease of 12.0±5.4% of shell thickness was observed after 15d of development. More severe impacts were found with a decrease of ~0.5 pHNBS unit during the first 2 days of development which could be attributed to a decrease of calcification due to a slight undersaturation of seawater with respect to aragonite. Indeed, important effects on both hatching and D-veliger shell growth were found. Hatching rates were 24±4% lower while D-veliger shells were 12.7±0.9% smaller at pHNBS~7.6 (pCO2~1900 µatm) than at a control pHNBS of ~8.1 (pCO2~540 µatm). Although these results show that blue mussel larvae are still able to develop a shell in seawater undersaturated with respect to aragonite, the observed decreases of hatching rates and shell growth could lead to a significant decrease of the settlement success. As the environmental conditions considered in this study do not necessarily reflect the natural conditions experienced by this species at the time of spawning, future studies will need to consider the whole larval cycle (from fertilization to settlement) under environmentally relevant conditions in order to investigate the potential ecological and economical losses of a decrease of this species fitness in the field.
    Keywords: Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Bicarbonate ion; Calcite saturation state; Calculated using CO2 1.1 (M. Frankignoulle); Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chlorophyll a; Chlorophyll a, standard deviation; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Experiment day; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Identification; Laboratory experiment; Mollusca; Mytilus edulis; Mytilus edulis, D-larvae hatching rate success; Mytilus edulis, D-larvae hatching rate success, standard deviation; Mytilus edulis, D-larvae shell length; Mytilus edulis, D-larvae shell length, standard deviation; Mytilus edulis, shell length; Mytilus edulis, shell length, standard deviation; Mytilus edulis, shell thickness; Mytilus edulis, shell thickness, standard deviation; Mytilus edulis, standard deviation; North Atlantic; OA-ICC; Ocean Acidification International Coordination Centre; Oxygen, standard deviation; Oxygen saturation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH, standard deviation; pH meter (Metrohm electrodes); Reproduction; Salinity; Salinity, standard deviation; Single species; Temperate; Temperature, standard deviation; Temperature, water; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 552 data points
    Location Call Number Expected Availability
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