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  • Artikel  (59)
  • 2010-2014  (38)
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  • Artikel  (59)
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  • 1
    Publikationsdatum: 2013-09-24
    Beschreibung: Author(s): R. Fisher, K. Avinash, E. Thomas, R. Merlino, and V. Gupta A surprising observation in dusty plasma experiments is that the dust thermal energy density, P d  ∝  n d T d , is typically much greater than n d T n (where n d and T d are the dust density and temperature, and T n is the neutral temperature), even though the dust particles would be expected to be in thermal eq... [Phys. Rev. E 88, 031101] Published Mon Sep 23, 2013
    Schlagwort(e): Plasma Physics
    Print ISSN: 1539-3755
    Digitale ISSN: 1550-2376
    Thema: Physik
    Standort Signatur Erwartet Verfügbarkeit
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  • 2
    Publikationsdatum: 2012-04-07
    Beschreibung: We present a novel rank-based fully multiple-criteria implementation of the Sobol′ variance-based sensitivity analysis approach that implements an objective strategy to evaluate parameter sensitivity when model evaluation involves several metrics of performance. The method is superior to single-criterion approaches while avoiding the subjectivity observed in “pseudo” multiple-criteria methods. Further, it contributes to our understanding of structural characteristics of a model and simplifies parameter estimation by identifying insensitive parameters that can be fixed to default values during model calibration studies. We illustrate the approach by applying it to the problem of identifying the most influential parameters in the Simple Biosphere 3 (SiB3) model using a network of flux towers in Brazil. We find 27–31 (out of 42) parameters to be influential, most (∼78%) of which are primarily associated with physiology, soil, and carbon properties, and that uncertainties in the physiological properties of the model contribute most to total model uncertainty in regard to energy and carbon fluxes. We also find that the second most important model component contributing to the total output uncertainty varies according to the flux analyzed; whereas morphological properties play an important role in sensible heat flux, soil properties are important for latent heat flux, and carbon properties (mainly associated with the soil respiration submodel) are important for carbon flux (as expected). These distinct sensitivities emphasize the need to account for the multioutput nature of land surface models during sensitivity analysis and parameter estimation. Applied to other similar models, our approach can help to establish which soil-plant-atmosphere processes matter most in land surface models of Amazonia and thereby aid in the design of field campaigns to characterize and measure the associated parameters. The approach can also be used with other sensitivity analysis procedures that compute at least two model performance metrics.
    Print ISSN: 0148-0227
    Thema: Geologie und Paläontologie , Physik
    Publiziert von Wiley im Namen von American Geophysical Union (AGU).
    Standort Signatur Erwartet Verfügbarkeit
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  • 3
    Publikationsdatum: 2012-04-28
    Beschreibung: As vertebrate embryos develop to adulthood, their organs undergo marked changes in size and tissue architecture. The heart acquires muscle mass and matures structurally to fulfil increasing circulatory needs, a process that is incompletely understood. Here we used multicolour clonal analysis to define the contributions of individual cardiomyocytes as the zebrafish heart undergoes morphogenesis from a primitive embryonic structure into its complex adult form. We find that the single-cardiomyocyte-thick wall of the juvenile ventricle forms by lateral expansion of several dozen cardiomyocytes into muscle patches of variable sizes and shapes. As juvenile zebrafish mature into adults, this structure becomes fully enveloped by a new lineage of cortical muscle. Adult cortical muscle originates from a small number of cardiomyocytes--an average of approximately eight per animal--that display clonal dominance reminiscent of stem cell populations. Cortical cardiomyocytes initially emerge from internal myofibres that in rare events breach the juvenile ventricular wall, and then expand over the surface. Our results illuminate the dynamic proliferative behaviours that generate adult cardiac structure, revealing clonal dominance as a key mechanism that shapes a vertebrate organ.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3340018/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3340018/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gupta, Vikas -- Poss, Kenneth D -- HL081674/HL/NHLBI NIH HHS/ -- R01 HL081674/HL/NHLBI NIH HHS/ -- R01 HL081674-07/HL/NHLBI NIH HHS/ -- Howard Hughes Medical Institute/ -- England -- Nature. 2012 Apr 25;484(7395):479-84. doi: 10.1038/nature11045.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Cell Biology and Howard Hughes Medical Institute, Duke University Medical Center, Durham, North Carolina 27710, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22538609" target="_blank"〉PubMed〈/a〉
    Schlagwort(e): Animals ; Cell Lineage ; Clone Cells/cytology ; Heart/anatomy & histology/*embryology/*growth & development ; Heart Injuries/pathology ; Heart Ventricles/anatomy & histology/cytology/embryology/growth & development ; Morphogenesis ; Myocardium/cytology ; Myocytes, Cardiac/*cytology ; Regeneration ; Staining and Labeling ; Zebrafish/anatomy & histology/*embryology/*growth & development
    Print ISSN: 0028-0836
    Digitale ISSN: 1476-4687
    Thema: Biologie , Chemie und Pharmazie , Medizin , Allgemeine Naturwissenschaft , Physik
    Standort Signatur Erwartet Verfügbarkeit
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  • 4
    Publikationsdatum: 2014-02-14
    Beschreibung: In acute myeloid leukaemia (AML), the cell of origin, nature and biological consequences of initiating lesions, and order of subsequent mutations remain poorly understood, as AML is typically diagnosed without observation of a pre-leukaemic phase. Here, highly purified haematopoietic stem cells (HSCs), progenitor and mature cell fractions from the blood of AML patients were found to contain recurrent DNMT3A mutations (DNMT3A(mut)) at high allele frequency, but without coincident NPM1 mutations (NPM1c) present in AML blasts. DNMT3A(mut)-bearing HSCs showed a multilineage repopulation advantage over non-mutated HSCs in xenografts, establishing their identity as pre-leukaemic HSCs. Pre-leukaemic HSCs were found in remission samples, indicating that they survive chemotherapy. Therefore DNMT3A(mut) arises early in AML evolution, probably in HSCs, leading to a clonally expanded pool of pre-leukaemic HSCs from which AML evolves. Our findings provide a paradigm for the detection and treatment of pre-leukaemic clones before the acquisition of additional genetic lesions engenders greater therapeutic resistance.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Shlush, Liran I -- Zandi, Sasan -- Mitchell, Amanda -- Chen, Weihsu Claire -- Brandwein, Joseph M -- Gupta, Vikas -- Kennedy, James A -- Schimmer, Aaron D -- Schuh, Andre C -- Yee, Karen W -- McLeod, Jessica L -- Doedens, Monica -- Medeiros, Jessie J F -- Marke, Rene -- Kim, Hyeoung Joon -- Lee, Kwon -- McPherson, John D -- Hudson, Thomas J -- HALT Pan-Leukemia Gene Panel Consortium -- Brown, Andrew M K -- Yousif, Fouad -- Trinh, Quang M -- Stein, Lincoln D -- Minden, Mark D -- Wang, Jean C Y -- Dick, John E -- CSC-105367/Canadian Institutes of Health Research/Canada -- R21 CA152613/CA/NCI NIH HHS/ -- England -- Nature. 2014 Feb 20;506(7488):328-33. doi: 10.1038/nature13038. Epub 2014 Feb 12.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉1] Princess Margaret Cancer Centre, University Health Network (UHN), Toronto, Ontario M5G 2M9, Canada [2]. ; Princess Margaret Cancer Centre, University Health Network (UHN), Toronto, Ontario M5G 2M9, Canada. ; 1] Princess Margaret Cancer Centre, University Health Network (UHN), Toronto, Ontario M5G 2M9, Canada [2] Department of Medicine, University of Toronto, Toronto, Ontario M5S 2J7, Canada [3] Division of Medical Oncology and Hematology, UHN, Toronto, Ontario M5G 2M9, Canada. ; 1] Princess Margaret Cancer Centre, University Health Network (UHN), Toronto, Ontario M5G 2M9, Canada [2] Department of Medicine, University of Toronto, Toronto, Ontario M5S 2J7, Canada [3] Division of Medical Oncology and Hematology, UHN, Toronto, Ontario M5G 2M9, Canada [4] Department of Medical Biophysics, University of Toronto, Toronto, Ontario M5G 2M9, Canada. ; 1] Princess Margaret Cancer Centre, University Health Network (UHN), Toronto, Ontario M5G 2M9, Canada [2] Radboud University, Nijmegen Medical Centre, Nijmegen 6500 HB, The Netherlands. ; Chonnam National University Hwasun Hospital, Genome Research Center for Hematopoietic Diseases, Gwangju 519-809, South Korea. ; 1] Department of Medical Biophysics, University of Toronto, Toronto, Ontario M5G 2M9, Canada [2] Ontario Institute for Cancer Research, Toronto, Ontario M5G 0A3, Canada. ; 1] Department of Medical Biophysics, University of Toronto, Toronto, Ontario M5G 2M9, Canada [2] Ontario Institute for Cancer Research, Toronto, Ontario M5G 0A3, Canada [3] Department of Molecular Genetics, University of Toronto, Toronto, Ontario M5S 1A8, Canada. ; Ontario Institute for Cancer Research, Toronto, Ontario M5G 0A3, Canada. ; 1] Ontario Institute for Cancer Research, Toronto, Ontario M5G 0A3, Canada [2] Department of Molecular Genetics, University of Toronto, Toronto, Ontario M5S 1A8, Canada. ; 1] Princess Margaret Cancer Centre, University Health Network (UHN), Toronto, Ontario M5G 2M9, Canada [2] Department of Molecular Genetics, University of Toronto, Toronto, Ontario M5S 1A8, Canada.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/24522528" target="_blank"〉PubMed〈/a〉
    Schlagwort(e): Animals ; Cell Differentiation ; Cell Division ; Cell Lineage ; Clone Cells/cytology/metabolism/pathology ; DNA (Cytosine-5-)-Methyltransferase/genetics/metabolism ; Drug Resistance, Neoplasm/drug effects ; Female ; Hematopoiesis ; Hematopoietic Stem Cells/*cytology/drug effects/metabolism/pathology ; Heterografts ; Humans ; Isocitrate Dehydrogenase/genetics ; Leukemia, Myeloid, Acute/diagnosis/drug therapy/genetics/*pathology ; Mice ; Mice, Inbred NOD ; Mice, SCID ; Mutation/genetics ; Neoplasm Transplantation ; Neoplastic Stem Cells/*cytology/drug effects/metabolism/pathology ; Nuclear Proteins/genetics ; Remission Induction ; T-Lymphocytes/metabolism/pathology
    Print ISSN: 0028-0836
    Digitale ISSN: 1476-4687
    Thema: Biologie , Chemie und Pharmazie , Medizin , Allgemeine Naturwissenschaft , Physik
    Standort Signatur Erwartet Verfügbarkeit
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  • 5
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    Unbekannt
    American Physical Society (APS)
    Publikationsdatum: 2013-04-24
    Beschreibung: Author(s): V. Gupta, G. Sánchez-Colón, S. Rajpoot, and H.-C. Wang We mimic the Wolfenstein scheme of quark flavor mixing to describe neutrino oscillations in the standard model. We identify the parameter λ with the experimentally measured value of the mixing element responsible for atmospheric neutrino oscillations. The matrix elements responsible for solar neutri... [Phys. Rev. D 87, 073009] Published Tue Apr 23, 2013
    Schlagwort(e): Electroweak interactions
    Print ISSN: 0556-2821
    Digitale ISSN: 1089-4918
    Thema: Physik
    Standort Signatur Erwartet Verfügbarkeit
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  • 6
    Publikationsdatum: 2013-04-23
    Print ISSN: 1550-7998
    Digitale ISSN: 1550-2368
    Thema: Physik
    Publiziert von American Physical Society
    Standort Signatur Erwartet Verfügbarkeit
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  • 7
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  • 9
    Publikationsdatum: 2005-12-05
    Print ISSN: 0003-6951
    Digitale ISSN: 1077-3118
    Thema: Physik
    Standort Signatur Erwartet Verfügbarkeit
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  • 10
    Publikationsdatum: 2012-05-21
    Print ISSN: 0021-9606
    Digitale ISSN: 1089-7690
    Thema: Chemie und Pharmazie , Physik
    Standort Signatur Erwartet Verfügbarkeit
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