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  • Other Sources  (12)
  • Elsevier  (7)
  • Wiley  (5)
  • Molecular Diversity Preservation International
  • 2020-2022
  • 2015-2019  (12)
  • 1
    Publication Date: 2020-02-06
    Description: Oceanographic observations from the Eurasian Basin north of Svalbard collected between January and June 2015 from the N-ICE2015 drifting expedition are presented. The unique winter observations are a key contribution to existing climatologies of the Arctic Ocean, and show a ∼100 m deep winter mixed layer likely due to high sea ice growth rates in local leads. Current observations for the upper ∼200 m show mostly a barotropic flow, enhanced over the shallow Yermak Plateau. The two branches of inflowing Atlantic Water are partly captured, confirming that the outer Yermak Branch follows the perimeter of the plateau, and the inner Svalbard Branch the coast. Atlantic Water observed to be warmer and shallower than in the climatology, is found directly below the mixed layer down to 800 m depth, and is warmest along the slope, while its properties inside the basin are quite homogeneous. From late May onwards, the drift was continually close to the ice edge and a thinner surface mixed layer and shallower Atlantic Water coincided with significant sea ice melt being observed.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 2
    Publication Date: 2019-02-01
    Description: Time-series studies of arctic marine ecosystems are rare. This is not surprising since polar regions are largely only accessible by means of expensive modern infrastructure and instrumentation. In 1999, the Alfred Wegener Institute, Helmholtz-Centre for Polar and Marine Research (AWI) established the LTER (Long-Term Ecological Research) observatory HAUSGARTEN crossing the Fram Strait at about 79° N. Multidisciplinary investigations covering all parts of the open-ocean ecosystem are carried out at a total of 21 permanent sampling sites in water depths ranging between 250 and 5500 m. From the outset, repeated sampling in the water column and at the deep seafloor during regular expeditions in summer months was complemented by continuous year-round sampling and sensing using autonomous instruments in anchored devices (i.e., moorings and free-falling systems). The central HAUSGARTEN station at 2500 m water depth in the eastern Fram Strait serves as an experimental area for unique biological in situ experiments at the seafloor, simulating various scenarios in changing environmental settings. Long-term ecological research at the HAUSGARTEN observatory revealed a number of interesting temporal trends in numerous biological variables from the pelagic system to the deep seafloor. Contrary to common intuition, the entire ecosystem responded exceptionally fast to environmental changes in the upper water column. Major variations were associated with a Warm-Water-Anomaly evident in surface waters in eastern parts of the Fram Strait between 2005 and 2008. However, even after 15 years of intense time-series work at HAUSGARTEN, we cannot yet predict with complete certainty whether these trends indicate lasting alterations due to anthropologically-induced global environmental changes of the system, or whether they reflect natural variability on multiyear time-scales, for example, in relation to decadal oscillatory atmospheric processes.
    Type: Article , PeerReviewed
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  • 3
    Publication Date: 2020-02-06
    Description: Highlights • The upper headwall region of Sahara Slide is mapped for the first time. • The upper headwall region comprises multiple slope failures. • Slope failure occurred on pronounced glide planes at different stratigraphic levels. • Failure is young (~ 2 ka) contradicting the hypotheses of a relatively stable continental margin at present. • This young age requires a reassessment of slope instability and associated risks off NW Africa. Abstract The Sahara Slide Complex in Northwest Africa is a giant submarine landslide with an estimated run-out length of ~ 900 km. We present newly acquired high-resolution multibeam bathymetry, sidescan sonar, and sub-bottom profiler data to investigate the seafloor morphology, sediment dynamics and the timing of formation of the upper headwall area of the Sahara Slide Complex. The data reveal a ~ 35 km-wide upper headwall opening towards the northwest with multiple slide scarps, glide planes, plateaus, lobes, slide blocks and slide debris. The slide scarps in the study area are formed by retrogressive failure events, which resulted in two types of mass movements, translational sliding and spreading. Three different glide planes (GP I, II, and III) can be distinguished approximately 100 m, 50 m and 20 m below the seafloor. These glide planes are widespread and suggest failure along pronounced, continuous weak layers. Our new data suggest an age of only about 2 ka for the failure of the upper headwall area, a date much younger than derived for the landslide deposits on the lower reaches of the Sahara Slide Complex, which are dated at 50–60 ka. The young age of the failure contradicts the postulate of a stable slope off Northwest Africa during times of relative stable sea-level highstands. Such an observation suggests that submarine-landslide risk along the continental margin of Northwest Africa should be reassessed based on a robust dating of proximal and distal slope failures.
    Type: Article , PeerReviewed
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  • 4
    Publication Date: 2019-09-23
    Description: Highlights • Sub-basalt imaging improvement on the Vøring Margin • Definition of a new seismic facies unit: the Lower Series Flows • Significant organic carbon content within the melting crustal segment • Apectodinium augustum marker for the PETM is reworked into the Lower Series Flows • The Lower Series Flows, early Eocene in age, predate the Vøring Margin breakup Abstract Improvements in sub-basalt imaging combined with petrological and geochemical observations from the Ocean Drilling Program (ODP) Hole 642E core provide new constraints on the initial breakup processes at the Vøring Margin. New and reprocessed high quality seismic data allow us to identify a new seismic facies unit which we define as the Lower Series Flows. This facies unit is seismically characterized by wavy to continuous subparallel reflections with an internal disrupted and hummocky shape. Drilled lithologies, which we correlate to this facies unit, have been interpreted as subaqueous flows extruding and intruding into wet sediments. Locally, the top boundary of this facies unit is defined as a negative in polarity reflection, and referred as the K-Reflection. This reflection can be correlated with the spatial extent of pyroclastic deposits, emplaced during transitional shallow marine to subaerial volcanic activities during the rift to drift transition. The drilled Lower Series Flows consist of peraluminous, cordierite bearing peperitic basaltic andesitic to dacitic flows interbedded with thick volcano-sedimentary deposits and intruded sills. The peraluminous geochemistry combined with available C (from calcite which fills vesicles and fractures), Sr, Nd, and Pb isotopes data point towards upper crustal rock-mantle magma interactions with a significant contribution of organic carbon rich pelagic sedimentary material during crustal anatexis. From biostratigraphic analyses, Apectodinium augustum was found in the The Lower Series Flows. This species is a marker for the Paleocene – Eocene Thermal Maximum (PETM). However, the absence of very low carbon isotope values (from bulk organic matter), that characterize the PETM, imply that A.augustum was reworked into the early Eocene sediments of this facies unit which predate the breakup time of the Vøring Margin. Finally, a plausible conceptual emplacement model for the Lower Series Flows facies unit is proposed. This model comprises several stages: (1) the emplacement of subaqueous peperitic basaltic andesitic flows intruding and/or extruding wet sediments; (2) a subaerial to shallow marine volcanism and extrusion of dacitic flows; (3) a proto-breakup phase with intense shallow marine to subaerial explosive volcanism responsible for pyroclastic flow deposits which can be correlated with the seismic K-Reflection and (4) the main breakup stage with intense transitional tholeiitic MORB-type volcanism and large subsidence concomitant with the buildup of the Seaward Dipping Reflector wedge.
    Type: Article , PeerReviewed
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  • 5
    Publication Date: 2019-02-01
    Description: Animal locomotory morphology, i.e. morphological features involved in locomotion, is under the influence of a diverse set of ecological and behavioral factors. In teleost fish, habitat choice and foraging strategy are major determinants of locomotory morphology. In this study, we assess the influence of habitat use and foraging strategy on important locomotory traits, namely the size of the pectoral and caudal fins and the weight of the pectoral fin muscles, as applied to one of the most astonishing cases of adaptive radiation: the species flock of cichlid fishes in East African Lake Tanganyika. We also examine the course of niche partitioning along two main habitat axes, the benthic vs. limnetic and the sandy vs. rocky substrate axis. The results are then compared with available data on the cichlid adaptive radiation of neighbouring Lake Malawi. We find that pectoral fin size and muscle weight correlate with habitat use within the water column, as well as with substrate composition and foraging strategies. Niche partitioning along the benthic–limnetic axis in Lake Tanganyikan cichlids seems to follow a similar course as in Lake Malawi, while the course of habitat use with respect to substrate composition appears to differ between the cichlid assemblages of these two lakes.
    Type: Article , PeerReviewed
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  • 6
  • 7
    Publication Date: 2020-07-27
    Description: Non-ribosomal peptide synthetases are complex multimodular biosynthetic machines that assemble various important and medically relevant peptide antibiotics. An interesting subgroup comprises the cyclodepsipeptide synthetases from fungi synthesizing cyclohexa- and cyclo-octadepsipeptides with antibacterial, anthelmintic, insecticidal, and anticancer properties; some are marketed drugs. We exploit the modularity of these highly homologous synthetases by fusing the hydroxy-acid-activating module of PF1022 synthetase with the amino-acid-activating modules of enniatin and beauvericin synthetase, thus yielding novel hybrid synthetases. The artificial synthetases expressed in Escherichia coli and the fungus Aspergillus niger yielded new cyclodepsipeptides, thus paving the way for the exploration of these derivatives for their bioactivity.
    Type: Article , PeerReviewed
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  • 8
    Publication Date: 2018-11-09
    Description: Highlights: • We provide a new phylogeny for Lake Tanganyika cichlids using 42 nuclear makers. • Data concatenation and a Bayesian concordance analysis lead to congruent results. • Gene tree discordance hints to past hybridization or incomplete lineage sorting. • The Lamprologini are the sister-group to the ‘H-lineage’. • The Eretmodini are nested within the ‘H-lineage’. Abstract: The species-flocks of cichlid fishes in the East African Great Lakes Victoria, Malawi and Tanganyika constitute the most diverse extant adaptive radiations in vertebrates. Lake Tanganyika, the oldest of the lakes, harbors the morphologically and genetically most diverse assemblage of cichlids and contains the highest number of endemic cichlid genera of all African lakes. Based on morphological grounds, the Tanganyikan cichlid species have been grouped into 12–16 distinct lineages, so-called tribes. While the monophyly of most of the tribes is well established, the phylogenetic relationships among the tribes remain largely elusive. Here, we present a new tribal level phylogenetic hypothesis for the cichlid fishes of Lake Tanganyika that is based on the so far largest set of nuclear markers and a total alignment length of close to 18 kb. Using next-generation amplicon sequencing with the 454 pyrosequencing technology, we compiled a dataset consisting of 42 nuclear loci in 45 East African cichlid species, which we subjected to maximum likelihood and Bayesian inference phylogenetic analyses. We analyzed the entire concatenated dataset and each marker individually, and performed a Bayesian concordance analysis and gene tree discordance tests. Overall, we find strong support for a position of the Oreochromini, Boulengerochromini, Bathybatini and Trematocarini outside of a clade combining the substrate spawning Lamprologini and the mouthbrooding tribes of the ‘H-lineage’, which are both strongly supported to be monophyletic. The Eretmodini are firmly placed within the ‘H-lineage’, as sister-group to the most species-rich tribe of cichlids, the Haplochromini. The phylogenetic relationships at the base of the ‘H-lineage’ received less support, which is likely due to high speciation rates in the early phase of the radiation. Discordance among gene trees and marker sets further suggests the occurrence of past hybridization and/or incomplete lineage sorting in the cichlid fishes of Lake Tanganyika.
    Type: Article , PeerReviewed
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  • 9
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    Elsevier
    In:  Trends in Microbiology, 26 (6). pp. 538-554.
    Publication Date: 2020-01-02
    Description: Since the onset of microbiology in the late 19th century, scientists have been growing microorganisms almost exclusively as pure cultures, resulting in a limited and biased view of the microbial world. Only a paradigm shift in cultivation techniques – from axenic to mixed cultures – can allow a full comprehension of the (chemical) communication of microorganisms, with profound consequences for natural product discovery, microbial ecology, symbiosis, and pathogenesis, to name a few areas. Three main technical advances during the last decade are fueling the realization of this revolution in microbiology: microfluidics, next-generation 3D-bioprinting, and single-cell metabolomics. These technological advances can be implemented for large-scale, systematic cocultivation studies involving three or more microorganisms. In this review, we present recent trends in microbiology tools and discuss how these can be employed to decode the chemical language that microorganisms use to communicate.
    Type: Article , PeerReviewed
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  • 10
    Publication Date: 2021-01-08
    Description: Microplastic pollution within the marine environment is of pressing concern globally. Accordingly, spatial monitoring of microplastic concentrations, composition and size distribution may help to identify sources and entry pathways, and hence allow initiating focused mitigation. Spatial distribution patterns of microplastics were investigated in two compartments of the southern North Sea by collecting sublittoral sediment and surface water samples from 24 stations. Large microplastics (500−5000 μm) were detected visually and identified using attenuated total reflection (ATR) Fourier transform infrared (FTIR) spectroscopy. The remaining sample was digested enzymatically, concentrated onto filters and analyzed for small microplastics (11−500 μm) using Focal Plane Array (FPA) FTIR imaging. Microplastics were detected in all samples with concentrations ranging between 2.8 and 1188.8 particles kg−1 for sediments and 0.1–245.4 particles m−3 for surface waters. On average 98% of microplastics were 〈100 μm in sediments and 86% in surface waters. The most prevalent polymer types in both compartments were polypropylene, acrylates/polyurethane/varnish, and polyamide. However, polymer composition differed significantly between sediment and surface water samples as well as between the Frisian Islands and the English Channel sites. These results show that microplastics are not evenly distributed, in neither location nor size, which is illuminating regarding the development of monitoring protocols.
    Type: Article , PeerReviewed
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