ALBERT

Description: Dissolved free amino acids (DFAA) in seawater are a form of nitrogen (N) available for marine microbes. In oligotrophic environments where N-containing nutrients are the limiting factor for microbial growth, N nutrition from DFAA could be crucial, but as yet it is poorly resolved. Measurements of individual DFAA are challenging as concentrations are typically in the low nmol L− 1 range. Here we report modifications to methodology using o-phthaldialdehyde (OPA) derivatization and reversed phase high performance liquid chromatography (HPLC) that provide a 30-fold improvement in sensitivity enabling the detection of 15 amino acids in seawater with a limit of detection as low as 10 pmol L− 1 with accuracy and precision of better than 10%. This analytical methodology is now suitable for the challenging quantitation of DFAA in oligotrophic seawaters. The method was successfully applied to a suite of seawater samples collected on a cruise crossing the South Atlantic Ocean, where concentrations of DFAAs were generally low (sub nmol L− 1), revealing basin-scale features in the oceanographic distributions of DFAA. This unique dataset implies that DFAAs are an important component of the N cycle in both near-coastal and open oceans. Further calculations suggest that the proportions of organic N originating from DFAA sources were significant, contributing between 0.2 and 200% that of NH4 + and up to 77% that of total inorganic nitrogen in the upper 400 m in some regions of the transect.

Description: Highlights • The Southern Hemisphere mid-latitudes are characterised by obliquity and semi-precession cycles during the Mi-1 deglaciation • The obliquity variability is attributed to polar influence and the semi-precessional variability to tropical influence • Semi-precession cycles do not appear until 23.01 Ma, corresponding to the onset of Antarctic deglaciation • The interaction between polar and tropical influence is related to the position and strength of the westerly wind belt Abstract It is well-known from geologic archives that Pleistocene and Holocene climate is characterised by cyclical variation on a wide range of timescales, and that these cycles of variation interact in complex ways. However, it is rarely possible to reconstruct sub-precessional (〈 20 kyr) climate variations for periods predating the oldest ice-core records (c. 800 ka). Here we present an investigation of orbital to potentially sub-precessional cyclicity from an annually resolved lake sediment core dated to a 100-kyr period in the earliest Miocene (23.03–22.93 Ma) and spanning a period of major Antarctic deglaciation associated with the second half of the Mi-1 event. Principal component analysis (PCA) of sediment bulk density, magnetic susceptibility (MS), and CIELAB L* and b* with a resolution of ~10 years indicates two major environmental processes governing the physical properties records, which we interpret as changes in wind strength and changes in precipitation. Spectral analysis of the principal components indicates that both processes are strongly influenced by obliquity (41 kyr). We interpret this 41-kyr cycle in wind strength and precipitation as related to the changing position and strength of the Southern Hemisphere westerly winds. Precipitation is also influenced by an 11-kyr cycle. The 11-kyr periodicity is potentially related to orbital cyclicity, representing the equatorial semi-precessional maximum insolation cycle. This semi-precession cycle has been identified in a number of records from the Pleistocene and Holocene and has recently been suggested to indicate that insolation in low-latitude regions may be an important driver of millennial-scale climate response to orbital forcing (Feretti et al., 2015). This is the first time this cycle has been identified in a mid-latitude Southern Hemisphere climate archive, as well as the first identification in pre-Pleistocene records. The 11-kyr cycle appears at around 23.01 Ma, which coincides with the initiation of a major phase of Antarctic deglaciation, and strengthens during the subsequent period of rapid ice decay. This pattern suggests that the westerly winds may have expanded north of 50°S at the height of Mi-1, excluding tropical influence from the Foulden Maar site, and subsequently contracted polewards in tandem with warming deep-sea temperatures and Antarctic deglaciation, allowing the advection of tropical waters further south.

Description: Whilst Herpesviridae, which infect higher vertebrates, actively influence host immune responses to ensure viral replication, it is mostly unknown if Alloherpesviridae, which infect lower vertebrates, possess similar abilities. An important antiviral response is clearance of infected cells via apoptosis, which in mammals influences the outcome of infection. Here, we utilise common carp infected with CyHV-3 to determine the effect on the expression of genes encoding apoptosis-related proteins (p53, Caspase 9, Apaf-1, IAP, iNOS) in the pronephros, spleen and gills. The influence of CyHV-3 on CCB cells was also studied and compared to SVCV (a rhabdovirus) which induces apoptosis in carp cell lines. Although CyHV-3 induced iNOS expression in vivo, significant induction of the genetic apoptosis pathway was only seen in the pronephros. In vitro CyHV-3 did not induce apoptosis or apoptosis-related expression whilst SVCV did stimulate apoptosis. This suggests that CyHV-3 possesses mechanisms similar to herpesviruses of higher vertebrates to inhibit the antiviral apoptotic process.

Description: In 2013, high-temperature vent fluids were sampled in the Nifonea vent field. This field is located within the caldera of a large shield-type volcano of the Vate Trough, a young extensional rift in the New Hebrides back-arc. Hydrothermal venting occurs as clear and black smoker fluids with temperatures up to 368 °C, the hottest temperatures measured so far in the western Pacific. The physico-chemical conditions place the fluids within the two-phase field of NaCl–H2O, and venting is dominated by vapour phase fluids with Cl concentrations as low as 25 mM. The fluid composition, which differs between the individual vent sites, is interpreted to reflect the specific geochemical fluid signature of a hydrothermal system in its initial, post-eruptive stage. The strong Cl depletion is accompanied by low alkali/Cl ratios compared to more evolved hydrothermal systems, and very high Fe/Cl ratios. The concentrations of REY (180 nM) and As (21 μM) in the most Cl-depleted fluid are among the highest reported so far for submarine hydrothermal fluids, whereas the inter-element REY fractionation is only minor. The fluid signature, which has been described here for the first time in a back-arc setting, is controlled by fast fluid passage through basaltic volcanic rocks, with extremely high water-rock ratios and only limited water-rock exchange, phase separation and segregation, and (at least) two-component fluid mixing. Metals and metalloids are unexpectedly mobile in the vapour phase fluids, and the strong enrichments of Fe, REY, and As highlight the metal transport capacity of low-salinity, low-density vapours at the specific physico-chemical conditions at Nifonea. One possible scenario is that the fluids boiled before the separated vapour phase continued to react with fresh glassy lavas. The mobilization of metals is likely to occur by leaching from fresh glass and grain boundaries and is supported by the high water/rock ratios. The enrichment of B and As is further controlled by their high volatility, whereas the strong enrichment of REY is also a consequence of the elevated concentrations in the host rocks. However, a direct contribution of metals such as As from magmatic degassing cannot be ruled out. The different fluid end-member composition of individual vent sites could be explained by mixing of vapour phase fluids with another fluid phase of different water/rock interaction history.

Description: Highlights • New and reprocessed seismic data improved structural mapping at the Møre Margin. • Time-structure and thickness maps of the Cretaceous units have been constructed. • Stratigraphy reconstruction of a transect reveals 188 km extension. • Average stretching factor is 2.2–3.6 depending on assumed initial crustal thickness. Abstract Lithospheric stretching is the key process in forming extensional sedimentary basins at passive rifted margins. This study explores the stretching factors, resulting extension, and structural evolution of the Møre segment on the Mid-Norwegian continental margin. Based on the interpretation of new and reprocessed high-quality seismic, we present updated structural maps of the Møre margin that show very thick post-rift sediments in the central Møre Basin and extensive sill intrusion into the Cretaceous sediments. A major shift in subsidence and deposition occurred during mid-Cretaceous. One transect across the Møre continental margin from the Slørebotn Subbasin to the continent-ocean boundary is reconstructed using the basin modelling software TecMod. We test different initial crustal configurations and rifting events and compare our structural reconstruction results to stretching factors derived both from crustal thinning and the classical backstripping/decompaction approach. Seismic interpretation in combination with structural reconstruction modelling does not support the lower crustal bodies as exhumed and serpentinised mantle. Our extension estimate along this transect is ~ 188 ± 28 km for initial crustal thickness varying between 30 and 40 km.

Description: We present whole rock 187Os/188Os data for the most mafic lavas along the Lesser Antilles arc (MgO = 5–17 wt.%) and for the subducting basalt and sediments. 187Os/188Os ratios vary from 0.127 to 0.202 in the arc lavas. Inverse correlations between 187Os/188Os and Os concentrations and between 187Os/188Os and indices of differentiation such as MgO suggests that assimilation, rather than source variation, is responsible for the range of Os isotopic variation observed. 87Sr/86Sr, La/Sm and Sr/Th are also modified by assimilation since they all correlate with 187Os/188Os. The assimilant is inferred to have a MORB-like 87Sr/86Sr with high Sr (〉700 ppm), low light on middle and heavy rare earth elements (L/M-HREE; La/Sm ∼2.5) and 187Os/188Os 〉 0.2. Such compositional features are likely to correspond to a plagioclase-rich early-arc cumulate. Given that assimilation affects lavas that were last stored at more than 5 kbar, assimilation must occur in the middle-lower crust. Only a high MgO picrite from Grenada escaped obvious assimilation (MgO = 17% wt.%) and could reflect mantle source composition. It has a very radiogenic 87Sr/86Sr (0.705) but a 187Os/188Os ratio that overlaps the mantle range (0.127). 187Os/188Os and 87Sr/88Sr ratios of the sediments and an altered basalt from the subducting slab vary from 0.18 to 3.52 and 0.708 to 0.714. We therefore suggest that, unlike Sr, no Os from the slab was transferred to the parental magmas. Os may be either retained in the mantle wedge or even returned to the deep mantle in the subducting slab.

Description: The study area is close to the boundary of three tectonic plates (Anatolian, Arabian, and African plates) and is characterized by important tectonic lineaments, which consist mainly of the Dead Sea Fault (DSF), the Karasu Fault, and the East Anatolian Fault (EAF) systems. To understand the origin of soil gas emanation and its relationships with the tectonics of the Amik Basin (Hatay), a detailed soil gas sampling was systematically performed. Together with CO2 flux measurements, 〉 220 soil gas samples were analyzed for Rn and CO2 concentrations. The distribution of soil Rn (kBq/m3), CO2 concentration (ppm), and CO2 flux (g/m2/day) in the area appears as a point source (spot) and/or diffuses (halo) anomalies along the buried faults/fractures due to crustal leaks. The results revealed that Rn and CO2 concentrations in the soil gas show anomalous values at the specific positions in the Amik Basin. The trace of these anomalous values is coincident with the N-S trending DSF. CO2 is believed to act as a carrier for Rn gas. Based on the Rn and CO2 concentrations of soil gases, at least three gas components are required to explain the observed variations. In addition to the atmospheric component, two other gas sources can be recognized. One is the deep crust component, which exhibits high Rn and CO2 concentrations, and is considered the best indicator for the surface location of fault/fracture zones in the region. The other component is a shallower gas source with high Rn concentration and low CO2 concentration. Moreover, He isotopic compositions of representative samples vary from 0.94 to 0.99 Ra, illustrating that most samples have a soil air component and may have mixed with some crustal component, without significant input of the mantle component. Based on the repeated measurements at a few sites, soil gas concentrations at the same site were observed to be higher in 2014 than in 2013, which may be associated with the activity of the DSF in 2013–2014. This suggests that soil gas variations at fault zone are closely related to the local crustal stress, and hence are suitable for monitoring fault activities.

Description: Climate models are potentially useful tools for addressing human dispersals and demographic change. The Arabian Peninsula is becoming increasingly significant in the story of human dispersals out of Africa during the Late Pleistocene. Although characterised largely by arid environments today, emerging climate records indicate that the peninsula was wetter many times in the past, suggesting that the region may have been inhabited considerably more than hitherto thought. Explaining the origins and spatial distribution of increased rainfall is challenging because palaeoenvironmental research in the region is in an early developmental stage. We address environmental oscillations by assembling and analysing an ensemble of five global climate models (CCSM3, COSMOS, HadCM3, KCM, and NorESM). We focus on precipitation, as the variable is key for the development of lakes, rivers and savannas. The climate models generated here were compared with published palaeoenvironmental data such as palaeolakes, speleothems and alluvial fan records as a means of validation. All five models showed, to varying degrees, that the Arabia Peninsula was significantly wetter than today during the Last Interglacial (130 ka and 126/125 ka timeslices), and that the main source of increased rainfall was from the North African summer monsoon rather than the Indian Ocean monsoon or from Mediterranean climate patterns. Where available, 104 ka (MIS 5c), 56 ka (early MIS 3) and 21 ka (LGM) timeslices showed rainfall was present but not as extensive as during the Last Interglacial. The results favour the hypothesis that humans potentially moved out of Africa and into Arabia on multiple occasions during pluvial phases of the Late Pleistocene.

Description: We have developed a global biogeographic classification of the mesopelagic zone to reflect the regional scales over which the ocean interior varies in terms of biodiversity and function. An integrated approach was necessary, as global gaps in information and variable sampling methods preclude strictly statistical approaches. A panel combining expertise in oceanography, geospatial mapping, and deep-sea biology convened to collate expert opinion on the distributional patterns of pelagic fauna relative to environmental proxies (temperature, salinity, and dissolved oxygen at mesopelagic depths). An iterative Delphi Method integrating additional biological and physical data was used to classify biogeographic ecoregions and to identify the location of ecoregion boundaries or inter-regions gradients. We define 33 global mesopelagic ecoregions. Of these, 20 are oceanic while 13 are ‘distant neritic.’ While each is driven by a complex of controlling factors, the putative primary driver of each ecoregion was identified. While work remains to be done to produce a comprehensive and robust mesopelagic biogeography (i.e., reflecting temporal variation), we believe that the classification set forth in this study will prove to be a useful and timely input to policy planning and management for conservation of deep-pelagic marine resources. In particular, it gives an indication of the spatial scale at which faunal communities are expected to be broadly similar in composition, and hence can inform application of ecosystem-based management approaches, marine spatial planning and the distribution and spacing of networks of representative protected areas