ALBERT

Beschreibung: Autism spectrum disorders (ASDs) are highly heritable, yet relatively few associated genetic loci have been replicated. Copy number variations (CNVs) have been implicated in autism; however, the majority of loci contribute to 〈1% of the disease population. Therefore, independent studies are important to refine associated CNV regions and discover novel susceptibility genes. In this study, a genome-wide SNP array was utilized for CNV detection by two distinct algorithms in a European ancestry case–control data set. We identify a significantly higher burden in the number and size of deletions, and disrupting more genes in ASD cases. Moreover, 18 deletions larger than 1 Mb were detected exclusively in cases, implicating novel regions at 2q22.1, 3p26.3, 4q12 and 14q23. Case-specific CNVs provided further evidence for pathways previously implicated in ASDs, revealing new candidate genes within the GABAergic signaling and neural development pathways. These include DBI , an allosteric binder of GABA receptors, GABARAPL1 , the GABA receptor-associated protein, and SLC6A11 , a postsynaptic GABA transporter. We also identified CNVs in COBL , deletions of which cause defects in neuronal cytoskeleton morphogenesis in model vertebrates, and DNER , a neuron-specific Notch ligand required for cerebellar development. Moreover, we found evidence of genetic overlap between ASDs and other neurodevelopmental and neuropsychiatric diseases. These genes include glutamate receptors ( GRID1 , GRIK2 and GRIK4 ), synaptic regulators ( NRXN3 , SLC6A8 and SYN3 ), transcription factor (ZNF804A) and RNA-binding protein FMR1 . Taken together, these CNVs may be a few of the missing pieces of ASD heritability and lead to discovering novel etiological mechanisms.

Beschreibung: Shiga toxin (Stx) 2e of Stx-producing Escherichia coli (STEC) represents the major virulence factor responsible for the pig edema disease which is characterized by hemorrhagic lesions, neurological disorders and often fatal outcomes. Stx2e-producing strains from the intestine of slaughtered pigs ( n  = 3), feces of piglets with postweaning diarrhea or edema disease ( n  = 12) and feces of humans with asymptomatic infections or mild diarrhea ( n  = 13) were comparatively analyzed for the binding specificities of Stx2e to glycosphingolipids (GSLs) of the globo-series. Besides equivalent binding towards globotriaosylceramide (Gb3Cer) and globotetraosylceramide (Gb4Cer), we could demonstrate specific interaction of Stx2e preparations from human and porcine STEC isolates with Forssman GSL. Notably, Forssman GSL was recognized neither by structurally closely related Stx2 nor by Stx1 derived from human STEC isolates conferring Stx2e a unique recognition feature. Noteworthy, 7 (54%) of the 13 human and 8 (53%) of the 15 pig Stx2e samples exhibited cytotoxic action towards human brain microvascular endothelial cells. Our findings provide a basis for further exploring the functional role of the promiscuous receptor repertoire of Stx2e and the exact nature of the mechanisms that underlie different pathological outcomes of Stx2e-producing STEC in humans and pigs.

Beschreibung: Carbonatite and silicate rocks occurring within a single magmatic complex may originate through liquid immiscibility. We thus experimentally determined carbonatite/silicate melt partition coefficients ( D carbonate melt/silicate melt , hereafter D ) for 45 elements to understand their systematics as a function of melt composition and to provide a tool for identifying the possible conjugate nature of silicate and carbonatite magmas. Static and, when necessary, centrifuging piston cylinder experiments were performed at 1–3 GPa, 1150–1260°C such that two well-separated melts resulted. Bulk compositions had Na K, Na ~ K, and Na K; for the latter we also varied bulk H 2 O (0–4 wt %) and SiO 2 contents. Oxygen fugacities were between iron–wüstite and slightly below hematite–magnetite and were not found to exert significant control on partitioning. Under dry conditions alkali and alkaline earth elements partition into the carbonatite melt, as did Mo and P ( D Mo 〉8, D P = 1·6–3·3). High field strength elements (HFSE) prefer the silicate melt, most strongly Hf ( D Hf = 0·04). The REE have partition coefficients around unity with D La/Lu = 1·6–2·3. Transition metals have D 〈 1 except for Cu and V ( D Cu ~ 1·3, D V = 0·95–2). The small variability of the partition coefficients in all dry experiments can be explained by a comparable width of the miscibility gap, which appears to be flat-topped in our dry bulk compositions. For all carbonatite and silicate melts, Nb/Ta and Zr/Hf fractionate by factors of 1·3–3·0, in most cases much more strongly than in silicate–oxide systems. With the exception of the alkalis, partition coefficients for the H 2 O-bearing systems are similar to those for the anhydrous ones, but are shifted in favour of the carbonatite melt by up to an order of magnitude. An increase of bulk silica and thus SiO 2 in the silicate melt (from 35 to 69 wt %) has a similar effect. Two types of trace element partitioning with changing melt composition can be observed. The magnitude of the partition coefficients increases for the alkalis and alkaline earths with the width of the miscibility gap, whereas partition coefficients for the REE shift by almost two orders of magnitude from partitioning into the silicate melt ( D La = 0·47) to strongly partitioning into the carbonatite melt ( D La = 38), whereas D La / D Lu varies by only a factor of three. The partitioning behavior can be rationalized as a function of ionic potential ( Z / r ). Alkali and alkaline earth elements follow a trend, the slope of which depends on the K/Na ratio and H 2 O content. Contrasting the sodic and potassic systems, alkalis have a positive correlation in D vs Z / r space in the potassic case and Cs to K partition into the silicate melt in the presence of H 2 O. For the divalent third row transition metals on the one hand and for the tri- and tetravalent REE and HFSE on the other, two trends of negative correlation of D vs Z / r can be defined. Nevertheless, the highest ionic strength network-modifying cations (V, Nb, Ta, Ti and Mo) do not follow any trend; understanding their behavior would require knowledge of their bonding environment in the carbonatite melt. Strong partitioning of REE into the carbonatite melt ( D REE = 5·8–38·0) occurs only in H 2 O-rich compositions for which carbonatites unmix from evolved alkaline melts with the conjugate silicate melt being siliceous. We thus speculate that upon hydrous carbonatite crystallization, the consequent saturation in fluids may lead to hydrothermal systems concentrating REE in secondary deposits.

Beschreibung: Recent genome-wide association studies identified 11 single nucleotide polymorphisms (SNPs) associated with breast cancer (BC) risk. We investigated these and 62 other SNPs for their prognostic relevance. Confirmed BC risk SNPs rs17468277 ( CASP8 ), rs1982073 ( TGFB1 ), rs2981582 ( FGFR2 ), rs13281615 (8q24), rs3817198 ( LSP1 ), rs889312 ( MAP3K1 ), rs3803662 ( TOX3 ), rs13387042 (2q35), rs4973768 ( SLC4A7 ), rs6504950 ( COX11 ) and rs10941679 (5p12) were genotyped for 25 853 BC patients with the available follow-up; 62 other SNPs, which have been suggested as BC risk SNPs by a GWAS or as candidate SNPs from individual studies, were genotyped for replication purposes in subsets of these patients. Cox proportional hazard models were used to test the association of these SNPs with overall survival (OS) and BC-specific survival (BCS). For the confirmed loci, we performed an accessory analysis of publicly available gene expression data and the prognosis in a different patient group. One of the 11 SNPs, rs3803662 ( TOX3 ) and none of the 62 candidate/GWAS SNPs were associated with OS and/or BCS at P 〈0.01. The genotypic-specific survival for rs3803662 suggested a recessive mode of action [hazard ratio (HR) of rare homozygous carriers=1.21; 95% CI: 1.09–1.35, P =0.0002 and HR=1.29; 95% CI: 1.12–1.47, P =0.0003 for OS and BCS, respectively]. This association was seen similarly in all analyzed tumor subgroups defined by nodal status, tumor size, grade and estrogen receptor. Breast tumor expression of these genes was not associated with prognosis. With the exception of rs3803662 (TOX3), there was no evidence that any of the SNPs associated with BC susceptibility were associated with the BC survival. Survival may be influenced by a distinct set of germline variants from those influencing susceptibility.

Beschreibung: Palmitoylation, the dynamic post-translational addition of the lipid, palmitate, to proteins by Asp-His-His-Cys-containing palmitoyl acyltransferase (PAT) enzymes, modulates protein function and localization and plays a key role in the nervous system. Huntingtin-interacting protein 14 (HIP14), a well-characterized neuronal PAT, has been implicated in the pathogenesis of Huntington disease (HD), a fatal neurodegenerative disease associated with motor, psychiatric and cognitive symptoms, caused by a CAG expansion in the huntingtin gene ( HTT ). Mice deficient for Hip14 expression develop neuropathological and behavioural features similar to HD, and the catalytic activity of HIP14 is impaired in HD mice, most likely due to the reduced interaction of HIP14 with HTT. Huntingtin-interacting protein 14-like (HIP14L) is a paralog of HIP14, with identical domain structure. Together, HIP14 and HIP14L are the major PATs for HTT. Here, we report the characterization of a Hip14l -deficient mouse model, which develops adult-onset, widespread and progressive neuropathology accompanied by early motor deficits in climbing, impaired motor learning and reduced palmitoylation of a novel HIP14L substrate: SNAP25. Although the phenotype resembles that of the Hip14 –/– mice, a more progressive phenotype, similar to that of the YAC128 transgenic mouse model of HD, is observed. In addition, HIP14L interacts less with mutant HTT than the wild-type protein, suggesting that reduced HIP14L-dependent palmitoylation of neuronal substrates may contribute to the pathogenesis of HD. Thus, both HIP14 and HIP14L may be dysfunctional in the disease.

Beschreibung: We report observations of four weak absorption lines of the interstellar CN A 2 -X 2 + (3,0) band: R 1 (0) 6951.8 Å, R Q 21 (0) 6927.3 Å, R 2 (1)+ R Q 1 (1) 6926.7 Å, Q R 12 (1)+Q 1 (1) 6953.6 Å, and show that they provide reasonable information on column densities in sightlines towards early-type stars. The (3,0) band is always very weak and thus the saturation effect is negligible, which is particularly useful for the sightlines where the near UV-range CN bands are very strong, i.e. saturated.