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  • Biomass  (3)
  • Mice  (2)
  • Chemistry
  • Surface physics, nanoscale physics, low-dimensional systems
  • 2005-2009  (5)
  • 2009  (5)
  • 1
    Publication Date: 2009-02-17
    Description: Injury or impaired clearance of apoptotic cells leads to the pathological accumulation of necrotic corpses, which induce an inflammatory response that initiates tissue repair. In addition, antigens present in necrotic cells can sometimes provoke a specific immune response and it has been argued that necrosis could explain adaptive immunity in seemingly infection-free situations, such as after allograft transplantation or in spontaneous and therapy-induced tumour rejection. In the mouse, the CD8alpha+ subset of dendritic cells phagocytoses dead cell remnants and cross-primes CD8+ T cells against cell-associated antigens. Here we show that CD8alpha+ dendritic cells use CLEC9A (also known as DNGR-1), a recently-characterized C-type lectin, to recognize a preformed signal that is exposed on necrotic cells. Loss or blockade of CLEC9A does not impair the uptake of necrotic cell material by CD8+ dendritic cells, but specifically reduces cross-presentation of dead-cell-associated antigens in vitro and decreases the immunogenicity of necrotic cells in vivo. The function of CLEC9A requires a key tyrosine residue in its intracellular tail that allows the recruitment and activation of the tyrosine kinase SYK, which is also essential for cross-presentation of dead-cell-associated antigens. Thus, CLEC9A functions as a SYK-coupled C-type lectin receptor to mediate sensing of necrosis by the principal dendritic-cell subset involved in regulating cross-priming to cell-associated antigens.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2671489/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2671489/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Sancho, David -- Joffre, Olivier P -- Keller, Anna M -- Rogers, Neil C -- Martinez, Dolores -- Hernanz-Falcon, Patricia -- Rosewell, Ian -- Reis e Sousa, Caetano -- A3598/Cancer Research UK/United Kingdom -- Cancer Research UK/United Kingdom -- England -- Nature. 2009 Apr 16;458(7240):899-903. doi: 10.1038/nature07750.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Immunobiology Laboratory, London Research Institute, Lincoln's Inn Fields Laboratories, 44 Lincoln's Inn Fields, London WC2A 3PX, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/19219027" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Antigens, CD8/metabolism ; CD8-Positive T-Lymphocytes/immunology ; Cells, Cultured ; Cross-Priming/immunology ; Dendritic Cells/*immunology/*metabolism ; Humans ; Lectins, C-Type/deficiency/genetics/*metabolism ; Ligands ; Mice ; Necrosis/*immunology/*metabolism ; Phagocytosis ; Receptors, Immunologic/deficiency/genetics/*metabolism ; Receptors, Mitogen/genetics/*metabolism ; Signal Transduction
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2009-12-08
    Description: Phytoplankton--the microalgae that populate the upper lit layers of the ocean--fuel the oceanic food web and affect oceanic and atmospheric carbon dioxide levels through photosynthetic carbon fixation. Here, we show that multidecadal changes in global phytoplankton abundances are related to basin-scale oscillations of the physical ocean, specifically the Pacific Decadal Oscillation and the Atlantic Multidecadal Oscillation. This relationship is revealed in approximately 20 years of satellite observations of chlorophyll and sea surface temperature. Interaction between the main pycnocline and the upper ocean seasonal mixed layer is one mechanism behind this correlation. Our findings provide a context for the interpretation of contemporary changes in global phytoplankton and should improve predictions of their future evolution with climate change.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Martinez, Elodie -- Antoine, David -- D'Ortenzio, Fabrizio -- Gentili, Bernard -- New York, N.Y. -- Science. 2009 Nov 27;326(5957):1253-6. doi: 10.1126/science.1177012.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉UPMC University of Paris 06, UMR 7093, Laboratoire d'Oceanographie de Villefranche (LOV), 06230 Villefranche-sur-Mer, France. martinez@obs-vlfr.fr〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/19965473" target="_blank"〉PubMed〈/a〉
    Keywords: Atlantic Ocean ; Biomass ; Chlorophyll/*analysis ; *Climate ; *Ecosystem ; Global Warming ; Indian Ocean ; Oceans and Seas ; Pacific Ocean ; Phytoplankton/*physiology ; Population Dynamics ; Seasons ; *Seawater/chemistry ; Temperature ; Time Factors
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 3
    Publication Date: 2009-07-25
    Description: A fundamental function of CD4+ helper T (T(H)) cells is the regulation of B cell-mediated humoral immunity. Development of T follicular helper (T(FH)) cells that provide help to B cells is mediated by the cytokines interleukin-6 and interleukin-21 but is independent of TH1, TH2, and TH17 effector cell lineages. Here, we characterize the function of Bcl6, a transcription factor selectively expressed in T(FH) cells. Bcl6 expression is regulated by interleukin-6 and interleukin-21. Bcl6 overexpression induced T(FH)-related gene expression and inhibited other T(H) lineage cell differentiation in a DNA binding-dependent manner. Moreover, Bcl6 deficiency in T cells resulted in impaired T(FH) cell development and germinal center reactions, and altered production of other effector T cell subsets. Our data thus illustrate that Bcl6 is required for programming of T(FH) cell generation.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2857334/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2857334/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Nurieva, Roza I -- Chung, Yeonseok -- Martinez, Gustavo J -- Yang, Xuexian O -- Tanaka, Shinya -- Matskevitch, Tatyana D -- Wang, Yi-Hong -- Dong, Chen -- R01 AI050746/AI/NIAID NIH HHS/ -- R01 AI050746-05/AI/NIAID NIH HHS/ -- R01 AI050761/AI/NIAID NIH HHS/ -- R01 AI050761-05/AI/NIAID NIH HHS/ -- R01 AI050761-06/AI/NIAID NIH HHS/ -- R01 AI050761-07A1/AI/NIAID NIH HHS/ -- R01 AI083761/AI/NIAID NIH HHS/ -- R01 AR050772/AR/NIAMS NIH HHS/ -- R01 AR050772-07/AR/NIAMS NIH HHS/ -- R01 AR050772-08/AR/NIAMS NIH HHS/ -- New York, N.Y. -- Science. 2009 Aug 21;325(5943):1001-5. doi: 10.1126/science.1176676. Epub 2009 Jul 23.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Immunology, M. D. Anderson Cancer Center, Houston, TX 77030, USA. rnurieva@mdanderson.org〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/19628815" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Antibody Formation ; B-Lymphocytes/immunology ; Cell Differentiation ; Cell Lineage ; Cytokines/immunology/metabolism ; DNA-Binding Proteins/deficiency/genetics/*metabolism ; Germinal Center/cytology/*immunology ; Immunoglobulins/biosynthesis ; Interleukin-6/immunology/metabolism ; Interleukins/immunology/metabolism ; Lymphocyte Activation ; Mice ; Mice, Inbred C57BL ; Mice, Transgenic ; Mutation ; RNA, Messenger/genetics/metabolism ; T-Lymphocyte Subsets/cytology/*immunology ; T-Lymphocytes, Helper-Inducer/cytology/*immunology ; Transcription Factors/genetics/*metabolism
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 4
    Publication Date: 2021-05-19
    Description: The occurrence of gurnard Prionotus stephanophrys was studied in the course of a series of fisheries research cruises on the Ecuadorian continental shelf between 1980 and 1985. The species is common in coastal waters south of 1°S . Its abundance is very variable, possibly associated with sea temperatures. Normally densities are between 0.8 and 1.6 t.km-2. The standing stock varies between 13,000 and 150,000 t wich it is estimated can sustain catches of around 4,000 t pet year, and up to 40,000 t in times of great abundance. P. stephanophyrs is found in large shoals on the bottom during the day but a night moves up into mid-water to feed on euphausids. The fish caught had size range of 12 cm to 37 cm, but the majority were between 16 cm and 21 cm in total length. The growth parameters and natural mortality were calculated. The present fisheries catch large quantities of these gurnards, but most is discarded at sea and the small amounts landed are only used for fish meal production. However, the flesh is of good quality and could easily be used for human consumption.
    Description: Published
    Keywords: Biomass ; Catch composition ; Biomass ; Abundance ; Catch composition ; Natural mortality
    Repository Name: AquaDocs
    Type: Journal Contribution
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  • 5
    Publication Date: 2021-05-19
    Description: A survey of demersal fish resources of the Continental Shelf of Ecuador was carried out between October 1980 an July 1985 by the National Fisheries Institute of Ecuador, with British Technical Cooperation. This report deals with the stock assessment part of the work. In the course of seven cruises, 366 valid diurnal hauls were made with a high-opening bottom trawl. The demersal fish resources were estimated by swept area methods and the results are presented. The overall average standing stock of demersal fish was 78 000 t of which 22 000 t was good fish, but 36 000 t were gurnards (Triglidae) and 3 000 t of unusable fish. The main stocks were gurnards, grunts and croakers, sharks and corvinas Cynoscion spp. The southern areas especially the Gulf of Guayaquil had the highest densities of fish (9,6 t.Km-2 or 4,0 t.Km-2 excluding gurnards). There was a massive abundance of the gurnard, Prionotus stephanophys in 1984 and 1985. There was a general decrease and other changes in the demersal stocks due to the effects of the ”El Niño” in 1983.
    Description: Published
    Keywords: Demersal fisheries ; Geographical distribution ; Biomass ; Demersal fisheries ; Geographical distribution ; Abundance ; Biomass
    Repository Name: AquaDocs
    Type: Journal Contribution
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