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    Publication Date: 2012-11-10
    Description:    A genomic DNA library enriched with GA/TC repeats from Camelina sativa variety Calena has been analysed. After sequencing of about 200 randomly selected clones, approximately 60 % of them showed to contain simple or compound microsatellites with a high number of repeats. Among all microsatellite markers analysed 15 primer pairs amplified polymorphic fragments. Forty C. sativa accessions of different origin were genotyped with 15 microsatellite markers that generated 134 alleles with an average of 8.93 alleles per locus . The observed heterozygosity (Ho) among the accessions ranged from 0.0 to 0.15 with an average of 0.0370, whereas the average of expected heterozygosity (He) among accessions was 0.2769. The analysis of the average total heterozygosity (H T  = 0.651), the intrapopulation genetic diversity (H S  = 0.260), the interpopulation genetic diversity (D ST  = 0.391) and the coefficient of genetic differentiation among populations (G ST  = 0.574) demonstrated that 57.4 % of the genetic diversity is among the accessions, while 42.6 % resides within them. Phylogenetic tree of the 40 C. sativa accessions was constructed based on Nei’s genetic distance. The unweighted pair group method with arithmetic mean (UPGMA) dendrogram shows, except for CAM108 and CAM170, a clear discrimination among C. sativa accessions grouping them in five subgroups. ANOVA analysis indicates significant differences in some biochemical and agronomic parameters among the C. sativa accessions grouped according to Nei’s genetic distance. The result of the Tukey HSD test demonstrated that the A4 subgroup showed a significant higher TWS and linoleic acid (LA) content, while the subgroup A1 showed a significant higher linolenic and lower LA content compared to the remaining groups. Content Type Journal Article Category Research Article Pages 1-14 DOI 10.1007/s10722-012-9913-8 Authors Antonella Manca, Istituto di Biologia e Biotecnologia Agraria, IBBA-CNR, Via Bassini 15, 20133 Milan, Italy Paola Pecchia, Istituto di Biologia e Biotecnologia Agraria, IBBA-CNR, Via Bassini 15, 20133 Milan, Italy Sergio Mapelli, Istituto di Biologia e Biotecnologia Agraria, IBBA-CNR, Via Bassini 15, 20133 Milan, Italy Piernicola Masella, Istituto di Biologia e Biotecnologia Agraria, IBBA-CNR, Via Bassini 15, 20133 Milan, Italy Incoronata Galasso, Istituto di Biologia e Biotecnologia Agraria, IBBA-CNR, Via Bassini 15, 20133 Milan, Italy Journal Genetic Resources and Crop Evolution Online ISSN 1573-5109 Print ISSN 0925-9864
    Print ISSN: 0925-9864
    Electronic ISSN: 1573-5109
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Published by Springer
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