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  • Journals  (51)
  • Other Sources  (236)
  • American Chemical Society (ACS)
  • Nature Publishing Group (NPG)
  • Oxford Univ. Press
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  • Journals  (51)
  • Articles  (145,411)
  • Other Sources  (236)
Media Type
  • 1
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.2000 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1525-7797
    Electronic ISSN: 1526-4602
    Topics: Chemistry and Pharmacology
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  • 2
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    American Chemical Society (ACS)
    Online: 94.2016 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0009-2347
    Electronic ISSN: 1520-605X , 2474-7408
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
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  • 3
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.2009 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1944-8244
    Electronic ISSN: 1944-8252
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
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  • 4
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    American Chemical Society (ACS)
    Online: 1(1).2015 –
    Publisher: American Chemical Society (ACS)
    Electronic ISSN: 2374-7951
    Topics: Chemistry and Pharmacology
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  • 5
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    American Chemical Society (ACS)
    Online: 1.2006 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1554-8929
    Electronic ISSN: 1554-8937
    Topics: Biology , Chemistry and Pharmacology
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  • 6
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    American Chemical Society (ACS)
    Online: 1.2016 –
    Publisher: American Chemical Society (ACS)
    Electronic ISSN: 2380-8195
    Topics: Energy, Environment Protection, Nuclear Power Engineering
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  • 7
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    American Chemical Society (ACS)
    Online: 1(1).2016 –
    Publisher: American Chemical Society (ACS)
    Electronic ISSN: 2470-1343
    Topics: Chemistry and Pharmacology
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  • 8
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    American Chemical Society (ACS)
    Online: 1.2018 –
    Publisher: American Chemical Society (ACS)
    Electronic ISSN: 2575-9108
    Topics: Chemistry and Pharmacology , Medicine
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  • 9
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    American Chemical Society (ACS)
    Online: 1.1929 –
    Formerly as: Industrial and Engineering Chemistry / Analytical Edition  (1929–1946)
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0003-2700 , 0096-4484
    Electronic ISSN: 1520-6882
    Topics: Chemistry and Pharmacology
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  • 10
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    American Chemical Society (ACS)
    Online: 1.1962 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0006-2960
    Electronic ISSN: 1520-4995
    Topics: Biology , Chemistry and Pharmacology
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  • 11
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    American Chemical Society (ACS)
    Online: 1.1989 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0897-4756
    Electronic ISSN: 1520-5002
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
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  • 12
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    Oxford Univ. Press
    Online: 1.1998 –
    Publisher: Oxford Univ. Press
    Topics: Political Science , Sociology , Economics
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  • 13
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    American Chemical Society (ACS)
    Online: 1(1).2016 –
    Publisher: American Chemical Society (ACS)
    Electronic ISSN: 2379-3694
    Topics: Biology , Chemistry and Pharmacology
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  • 14
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    American Chemical Society (ACS)
    Online: 1.2012 –
    Publisher: American Chemical Society (ACS)
    Electronic ISSN: 2161-5063
    Topics: Biology , Chemistry and Pharmacology
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  • 15
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    Oxford Univ. Press
    Online: 2014 –
    Publisher: Oxford Univ. Press
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
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  • 16
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    American Chemical Society (ACS)
    Online: 1.1987 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0887-0624
    Electronic ISSN: 1520-5029
    Topics: Chemistry and Pharmacology , Energy, Environment Protection, Nuclear Power Engineering , Process Engineering, Biotechnology, Nutrition Technology
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  • 17
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    American Chemical Society (ACS)
    Online: 3(8).2000 – 7(12).2004
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1099-8209
    Electronic ISSN: 1532-4486
    Topics: Chemistry and Pharmacology
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  • 18
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    American Chemical Society (ACS)
    Online: 1.1990 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1043-1802
    Electronic ISSN: 1520-4812
    Topics: Chemistry and Pharmacology
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  • 19
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    American Chemical Society (ACS)
    Online: 30(9).2000 – 31(12).2001
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1531-5339
    Electronic ISSN: 1527-4799
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
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  • 20
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    American Chemical Society (ACS)
    Online: 1.1924 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0009-2665
    Electronic ISSN: 1520-6890
    Topics: Chemistry and Pharmacology
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  • 21
    Formerly as: Journal of Chemical Documentation; Journal of Chemical Information and Computer Sciences  (1961–2004)
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0021-9576 , 0095-2338 , 1549-9596
    Electronic ISSN: 1520-5142 , 1549-960X
    Topics: Chemistry and Pharmacology
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  • 22
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    American Chemical Society (ACS)
    Online: 1.1959 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0022-2623 , 0095-9065
    Electronic ISSN: 1520-4804 , 1943-2992
    Topics: Chemistry and Pharmacology , Medicine
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  • 23
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    American Chemical Society (ACS)
    Online: 1.2001 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1528-7483
    Electronic ISSN: 1528-7505
    Topics: Chemistry and Pharmacology , Geosciences , Physics
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  • 24
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    American Chemical Society (ACS)
    Online: 1.1909 – 62.1970
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0019-7866 , 0095-9014
    Electronic ISSN: 1541-5724 , 1943-2968
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
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  • 25
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    American Chemical Society (ACS)
    Online: 1.1962 – 25.1986
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0196-4305
    Electronic ISSN: 1541-5716
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
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  • 26
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.1962 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0020-1669
    Electronic ISSN: 1520-510X
    Topics: Chemistry and Pharmacology
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  • 27
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    American Chemical Society (ACS)
    Online: 1.2001 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1530-6984
    Electronic ISSN: 1530-6992
    Topics: Chemistry and Pharmacology , Physics
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  • 28
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    American Chemical Society (ACS)
    Online: 1.1982 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0276-7333
    Electronic ISSN: 1520-6041
    Topics: Chemistry and Pharmacology
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  • 29
    Journal cover
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    American Chemical Society (ACS)
    Online: 26.1987 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0888-5885
    Electronic ISSN: 1520-5045
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
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  • 30
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    American Chemical Society (ACS)
    Online: 1.1999 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1523-7060
    Electronic ISSN: 1523-7052
    Topics: Chemistry and Pharmacology
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  • 31
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    American Chemical Society (ACS)
    Online: 1.1985 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0743-7463
    Electronic ISSN: 1520-5827
    Topics: Chemistry and Pharmacology
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  • 32
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    American Chemical Society (ACS)
    Online: 1.2004 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1543-8384
    Electronic ISSN: 1543-8392
    Topics: Chemistry and Pharmacology
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  • 33
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    American Chemical Society (ACS)
    Online: 1(1).1961 – 14(4).1974
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0021-9576
    Electronic ISSN: 1541-5732
    Topics: Chemistry and Pharmacology
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  • 34
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    American Chemical Society (ACS)
    Online: 1.1956 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0021-9568 , 0095-9146
    Electronic ISSN: 1520-5134
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
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  • 35
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    American Chemical Society (ACS)
    Online: 1.1936 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0022-3263
    Electronic ISSN: 1520-6904
    Topics: Chemistry and Pharmacology
    Parallel titles: The Journal of Organic Chemistry
    Acronym: JOC
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  • 36
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    American Chemical Society (ACS)
    Online: 1.1962 – 25.1986
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0196-4313
    Electronic ISSN: 1541-4833
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
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  • 37
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0091-1968 , 0196-4321 , 0536-1079
    Electronic ISSN: 1541-4841 , 1943-2976 , 1943-3026
    Topics: Chemistry and Pharmacology , Process Engineering, Biotechnology, Nutrition Technology
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  • 38
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    American Chemical Society (ACS)
    Online: 9(11).2000 – 13(12).2004
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1062-094X
    Electronic ISSN: 1532-4494
    Topics: Chemistry and Pharmacology
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  • 39
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.2002 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1535-3893
    Electronic ISSN: 1535-3907
    Topics: Chemistry and Pharmacology
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  • 40
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.1968 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0024-9297
    Electronic ISSN: 1520-5835
    Topics: Chemistry and Pharmacology , Physics
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  • 41
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.1967 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0013-936X
    Electronic ISSN: 1520-5851
    Topics: Chemistry and Pharmacology , Energy, Environment Protection, Nuclear Power Engineering
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  • 42
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.2014 –
    Publisher: American Chemical Society (ACS)
    Electronic ISSN: 2328-8930
    Topics: Energy, Environment Protection, Nuclear Power Engineering
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  • 43
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.1953 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0021-8561
    Electronic ISSN: 1520-5118
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition , Process Engineering, Biotechnology, Nutrition Technology
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  • 44
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.2005 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1549-9618
    Electronic ISSN: 1549-9626
    Topics: Chemistry and Pharmacology
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  • 45
    Journal cover
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    American Chemical Society (ACS)
    Online: 101.1997 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1089-5639
    Electronic ISSN: 1520-5215
    Topics: Chemistry and Pharmacology , Physics
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  • 46
    Journal cover
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    American Chemical Society (ACS)
    Online: 101(1).1997 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1089-5647 , 1520-6106
    Electronic ISSN: 1520-5207
    Topics: Chemistry and Pharmacology , Physics
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  • 47
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.2010 –
    Publisher: American Chemical Society (ACS)
    Electronic ISSN: 1948-7185
    Topics: Chemistry and Pharmacology , Physics
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  • 48
    Journal cover
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    American Chemical Society (ACS)
    Online: 111.2007 –
    Publisher: American Chemical Society (ACS)
    Print ISSN: 1932-7447
    Electronic ISSN: 1932-7455
    Topics: Chemistry and Pharmacology
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  • 49
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.1896 – 39.1935
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0022-3654
    Electronic ISSN: 1541-5740
    Topics: Chemistry and Pharmacology , Physics
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  • 50
    Journal cover
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    American Chemical Society (ACS)
    Online: 1.1896 – 100.1996
    Publisher: American Chemical Society (ACS)
    Print ISSN: 0022-3654 , 0092-7023 , 0092-7325
    Electronic ISSN: 1541-5740 , 1943-300X , 1943-3018
    Topics: Chemistry and Pharmacology , Physics
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  • 51
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    Oxford Univ. Press
    Online: 2.1900 – 97.1995
    Publisher: Oxford Univ. Press
    Print ISSN: 0010-5422
    Electronic ISSN: 1938-5129
    Topics: Biology
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  • 52
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    Oxford Univ. Press
    In:  Oxford, Oxford Univ. Press, vol. 7, no. XVI:, pp. 227-235, (ISBN 3-342-00685-4)
    Publication Date: 1989
    Keywords: Inelastic ; Textbook of geophysics ; Physical properties of rocks ; Laboratory measurements ; Textbook of physics
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  • 53
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    Oxford Univ. Press
    In:  Oxford, Oxford Univ. Press, vol. 3, pp. 158, (ISBN 0-444-50968-2)
    Publication Date: 1964
    Keywords: Textbook of physics ; Friction ; Physical properties of rocks ; Fluids
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  • 54
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    Oxford Univ. Press
    In:  Oxford, 3rd Edition, 459 pp., Oxford Univ. Press, vol. 46, no. XVI:, pp. 1-14, (ISBN: 0-387-30752-4)
    Publication Date: 1961
    Keywords: Textbook of mathematics ; Statistical investigations ; Error analysis ; Earthquake hazard
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  • 55
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    Oxford Univ. Press
    In:  New York, 330 pp., Oxford Univ. Press, vol. 1, no. 1, pp. 65-66, (ISBN 0-19-850694-5)
    Publication Date: 2004
    Keywords: Textbook of physics ; critical ; phenomena, ; elementary ; particles, ; phase ; transitions, ; Ising
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  • 56
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    Oxford Univ. Press
    In:  New York, 2nd ed. (1st in 1988), 559 pp., Oxford Univ. Press, vol. 52, no. ALEX(01)-FR-77-01, AFTAC Contract F08606-76-C-0025, pp. 95-104, (ISBN: 0-08-044051-7)
    Publication Date: 2000
    Keywords: Rheology ; Inelastic ; Textbook of engineering ; Textbook of geophysics
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  • 57
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    Oxford Univ. Press
    In:  Cary, NC 27513; 304 pp., Oxford Univ. Press, vol. 1, no. 3, pp. 632 pp., (ISBN 0-19-513895-3)
    Publication Date: 2000
    Keywords: Statistical investigations ; Textbook of geophysics ; Textbook of geology ; Textbook of informatics ; GIS ; Bayesian ; Maximum ; Entropy ; (Boundary Element Method)
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  • 58
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    Oxford Univ. Press
    In:  New York, 230 pp., Oxford Univ. Press, vol. 15, no. Publ. No. 12, pp. 585, (ISBN 0080424309)
    Publication Date: 2000
    Keywords: ethics ; moral ; misconduct ; objectivity ; ideology ; repeatability ; method
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  • 59
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    Oxford Univ. Press
    In:  Oxford, Oxford Univ. Press, vol. 34, no. 1, pp. 65-66, (ISBN: 3-528-02574-3)
    Publication Date: 1990
    Keywords: Textbook of informatics ; FTN90 ; software ; compiler
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  • 60
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    Oxford Univ. Press
    In:  Dordrecht, Oxford Univ. Press, vol. 20, no. Publ. No. 12, pp. 81-89, (ISBN 8189304143)
    Publication Date: 1998
    Keywords: Textbook of geophysics ; Fluids ; PAG
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  • 61
    Publication Date: 2020-07-20
    Description: An investigation was carried out on larvae of the oceanic tropical squid Sthenoteuthis pteropus in the equatorial Atlantic (2°30′N–7°S;12°W –8°30′E) The age of the larvae was calculated from the statolith microstructure of 20 larvae; mortality was estimated from the size structure of 1128 larvae. The larval stage lasts 32–38 days. At ages ranging from 14 to 38 days. the daily relative growth rates of mantle length decrease from 7.5 to 2.8% day −1 and from 14–16 to 5.8% of body weight day −1 At age 12–24 days, mortality rates were estimated using both raw catch data and corrected data accounting for net avoidance. The mean value of raw mortality rates was 0.189, the corrected value was 0.158. During the proboscis division (transformation of the larva into juvenile) at age 25–35 days, a sharp decrease in larval growth rates and a simultaneous increase in mortality rates (raw 0.443, corrected 0.379) were observed.
    Type: Article , PeerReviewed
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  • 62
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    Oxford Univ. Press
    In:  ICES Journal of Marine Science, 52 (1). pp. 127-137.
    Publication Date: 2020-07-29
    Description: A number of reproductive indices were compared with a subjective maturity scale for assessment of Loligo forbesi maturity. The ratio between nidamental gland length and mantle length corresponded well with female maturation, as did the ovary mass-soma mass and nidamental gland mass-soma mass ratios. For males, the ratio between spermatophoric complex mass and somatic mass was found to be the most suitable for maturity assessment. The timing of recruitment and maturation of L. forbesi in Irish waters was described from the size and maturity of squid in commercial landings in the south of Ireland during the years 1991–1993. Immature squid first appeared in commercial catches in July and August, and this represented the main period of recruitment. A second period of recruitment was apparent in December 1991, but was not identified in the 1992–1993 season. Mature females were present in the commercially exploited population between November and April, with a small number also found in the summer. The abundance of egg masses was used to indicate timing of spawning. Egg masses recovered from the Cork coast indicated that peak spawning occurred during the winter months, but continued on a small scale for much of the year.
    Type: Article , PeerReviewed
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  • 63
    Publication Date: 2020-02-06
    Description: The transition from benthos to plankton requires multiple adaptations, yet so far it remains unclear how these are acquired in the course of the transition. To investigate this process, we analyzed the genetic diversity and distribution patterns of a group of foraminifera of the genus Bolivina with a tychopelagic mode of life (same species occurring both in benthos and plankton). We assembled a global sequence data set for this group from single-cell DNA extractions and occurrences in metabarcodes from pelagic environmental samples. The pelagic sequences all cluster within a single monophyletic clade within Bolivina. This clade harbors three distinct genetic lineages, which are associated with incipient morphological differentiation. All lineages occur in the plankton and benthos, but only one lineage exhibits no limit to offshore dispersal and has been shown to grow in the plankton. These observations indicate that the emergence of buoyancy regulation within the clade preceded the evolution of pelagic feeding and that the evolution of both traits was not channeled into a full transition into the plankton. We infer that in foraminifera, colonization of the planktonic niche may occur by sequential cooptation of independently acquired traits, with holoplanktonic species being recruited from tychopelagic ancestors
    Type: Article , PeerReviewed
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  • 64
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    Oxford Univ. Press
    In:  Journal of Plankton Research, 39 (6). pp. 943-961.
    Publication Date: 2020-02-06
    Description: The sea surface microlayer (SML) is the uppermost layer of the water column that links the ocean and atmosphere. It accumulates a variety of biogenic surface-active and buoyant substances, including gelatinous material, such as transparent exopolymer particles (TEP) and Coomassie stainable particles (CSP), potentially affecting air–sea exchange processes. Here, we studied the influence of the annual cycle of phytoplankton production on organic matter (OM) accumulation in the SML relative to the subsurface water (SSW). Sampling was performed monthly from April 2012 to November 2013 at the Boknis Eck Time Series Station (Baltic Sea). For SML sampling, we used the Garrett screen, while SSW samples were collected by Niskin bottles at 1 m depth. Samples were analyzed for carbohydrates, amino acids, TEP, CSP, chlorophyll a (SSW only) and bacterial abundance. Our data showed that the SML reflected the SSW during most parts of the year, with changes mainly responding to bloom formation and decay. OM composition during phytoplankton blooms clearly differed from periods of higher bacterial abundance. Of all components investigated, only the enrichment of total carbohydrates in the SML was inversely related to the wind speed indicating that wind-driven mixing also affected the accumulation of OM in the SML during our study.
    Type: Article , PeerReviewed
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  • 65
    Publication Date: 2021-02-08
    Description: On 25 December 2016, a Mw 7.6 earthquake broke a portion of the Southern Chilean subduction zone south of Chiloé Island, located in the central part of the Mw 9.5 1960 Valdivia earthquake. This region is characterized by repeated earthquakes in 1960 and historical times with very sparse interseismic activity due to the subduction of a young (~15 Ma), and therefore hot, oceanic plate. We estimate the co-seismic slip distribution based on a kinematic finite fault source model, and through joint inversion of teleseismic body waves and strong motion data. The coseismic slip model yields a total seismic moment of 3.94×1020 Nm that occurred over ~30 s, with the rupture propagating mainly downdip, reaching a peak-slip of ~4.2 m. Regional moment tensor inversion of stronger aftershocks reveals thrust type faulting at depths of the plate interface. The fore- and aftershock seismicity is mostly related to the subduction interface with sparse seismicity in the overriding crust. The 2016 Chiloé event broke a region with increased locking and most likely broke an asperity of the 1960 earthquake. The updip limit of the main event, aftershocks, foreshocks and interseismic activity are spatially similar, located ~15 km offshore and parallel to Chiloé Islands west coast. The coseismic slip model of the 2016 Chiloé earthquake suggests a peak slip of 4.2 m that locally exceeds the 3.38 m slip deficit that has accumulated since 1960. Therefore, the 2016 Chiloé earthquake possibly released strain that has built up prior to the 1960 Valdivia earthquake.
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  • 66
    facet.materialart.
    Unknown
    American Chemical Society (ACS)
    In:  Industrial & Engineering Chemistry Research, 53 (17). pp. 6998-7007.
    Publication Date: 2018-01-03
    Description: Structure I methane hydrates are formed in situ from water-in-mineral oil emulsions in a high pressure rheometer cell. Viscosity is measured as hydrates form, grow, change under flow, and dissociate. Experiments are performed at varying water volume fraction in the original emulsion (0–0.40), temperature (0–6 °C), and initial pressure of methane (750–1500 psig). Hydrate slurries exhibit a sharp increase in viscosity upon hydrate formation, followed by complex behavior dictated by factors including continued hydrate formation, shear alignment, methane depletion/dissolution, aggregate formation, and capillary bridging. Hydrate slurries possess a yield stress and are shear-thinning fluids, which are described by the Cross model. Hydrate slurry viscosity and yield stress increased with increasing water volume fraction. As driving force for hydrate formation decreases (increasing temperature, decreasing pressure), hydrate slurry viscosity increases, suggesting that slower hydrate formation leads to larger and more porous aggregates. In total, addition of water to a methane saturated oil can cause more than a fifty-fold increase in viscosity if hydrates form.
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  • 67
    Publication Date: 2021-02-08
    Description: We used a molecular phylogenetic approach to investigate species delimitation and diversification in the northeastern Atlantic and Mediterranean musseldrills of the Ocinebrina aciculata complex, based on molecular data from topotypical material of many of the nominal taxa. The complex is shown to consist of at least five species: Ocinebrina aciculata (Lamarck, 1822) from the Atlantic and western Mediterranean; O. cf. corallina (Scacchi, 1836) from the central Mediterranean Sea; O. reinai Bonomolo & Crocetta, 2012 from the Tyrrhenian Sea; O. corallinoides Pallary, 1912 from the Gulf of Gabès; and O. aegeensis n. sp. currently known from the Aegean Sea only. The new species is differentiated from the other taxa by very subtle morphological diagnostic features, although it is clearly identified by genetic distance and apomorphic DNA-sequence characters. The identity of Murex corallinus Scacchi, 1836 (type species of Ocinebrina Jousseaume, 1880) could not be defined with certainty, pending genetic comparison of specimens of the â €? large Tyrrhenian morphotype' (corresponding to the neotype, but not assayed herein) with the assayed â €? small morphotype'.
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  • 68
    facet.materialart.
    Unknown
    Oxford Univ. Press
    In:  ICES Journal of Marine Science, 49 (2). pp. 199-208.
    Publication Date: 2018-03-19
    Description: In 1988 and 1989 the occurrence of external diseases in fish from the German part of the Wadden Sea was quantified. Thirty-two stations, located along seven transects including four estuaries, were sampled monthly or at 3-month intervals with shrimp trawlers: more than 124 000 fish were studied. Six percent of the seven dominant fish species of 〉 12 cm length were diseased. In fish species which complete their life cycle in the Wadden Sea (gobies, hooknose, eelpout, sea scorpion) the total disease incidence was below 0.4%. In whiting, plaice and sole it was between 0.5 and 2.5%, while 6–8% of smelt, cod, eel, dab and flounder suffered from external lesions. The incidence of most diseases increased with increasing fish length. Similar geographical patterns in prevalence were observed for: (1) two types of skeletal deformities, (2) lymphocystis in dab and flounder, (3) papillomatosis in smelt and dab and (4) several infectious ulcerative diseases. Most of these ulcerative diseases of cod and flounder occurred on central estuarine stations, suggesting an impact of the relatively low, but greatly variable salinity on disease development. Buccal granulomatosis of smelt and papillomatosis of eels showed the highest incidence in the Elbe estuary as the most heavily polluted region of the Wadden Sea. A causal relationship between disease development and pollution, however, is not yet clear and requires experimental evidence. The disease types found are ranked into three priority groups regarding their indicator value for a pollution monitoring on the basis of fish diseases. There is evidence that the total disease load of fish in the Wadden Sea is higher than in other shallow coastal regions outside the North Sea. Little is known of the effects of these diseases on single fish and fish populations. “Yellow pest” of cod, which was recorded for the first time during this survey, and which occurred with an incidence of up to 14% in single estuarine samples, causes the most serious lesions and is supposed to be lethal. In total, however, the effects of a number of pathogenic parasites on fish survival is considered to be more serious than that of deformities and infectious diseases.
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  • 69
    Publication Date: 2021-02-08
    Description: Marine sponges are early-branched metazoans known to harbor dense and diverse microbial communities. Yet the role of the so far uncultivable alphaproteobacterial lineages that populate these sessile invertebrates remains unclear. We applied a sequence composition-dependent binning approach to assemble one Rhodospirillaceae genome from the Spongia officinalis microbial metagenome and contrast its functional features with those of closely related sponge-associated and free-living genomes. Both symbiotic and free-living Rhodospirillaceae shared a suite of common features, possessing versatile carbon, nitrogen, sulfur and phosphorus metabolisms. Symbiotic genomes could be distinguished from their free-living counterparts by the lack of chemotaxis and motility traits, enrichment of genes required for the uptake and utilization of organic sulfur compounds—particularly taurine—, higher diversity and abundance of ABC transporters, and a distinct repertoire of genes involved in natural product biosynthesis, plasmid stability, cell detoxification and oxidative stress remediation. These sessile symbionts may more effectively contribute to host fitness via nutrient exchange, and also host detoxification and chemical defense. Considering the worldwide occurrence and high diversity of sponge-associated Rhodospirillaceae verified here using a tailored in silico approach, we suggest that these organisms are not only relevant to holobiont homeostasis but also to nutrient cycling in benthic ecosystems.
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  • 70
    facet.materialart.
    Unknown
    Oxford Univ. Press
    In:  ICES Journal of Marine Science, 48 . pp. 195-200.
    Publication Date: 2020-07-29
    Description: Earlier work by the second author on the growth of oceanic squids, based on sizefrequency distributions of beaks sampled from sperm whale stomachs and on structural marks on those beaks, showed that these squids apparently had growth rates far in excess of those reported for the fastest-growing fishes, e.g. bluefin tuna. The application of recently developed methods for analysis of length-frequency distributions to some of these earlier data, and new approaches for assessing and comparing the growth performance offish and aquatic invertebrates, suggest the need for a downward revision of these high growth estimates. This is illustrated here with data on Kondakovia longimana (Cephalopoda, Onychoteuthidae) sampled off Durban and Donkergat, South Africa, in the early to mid-1960s.
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  • 71
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    Unknown
    Oxford Univ. Press
    In:  The Auk, 102 (3). pp. 540-549.
    Publication Date: 2020-05-13
    Description: The antarctic krill Euphausia superba forms abundant, well-organized schools in the waters off the Antarctic Peninsula. Mean avian density is 2.6 times greater in waters where krill schools are present than in waters without krill schools. Seabird density is a good predictor of the presence of krill. Seabird density did not correlate with krill density or krill school depth. Disoriented krill routinely were observed swimming near the surface above submerged schools, providing potential prey for surface-feeding birds. Responses of seabird species to the distribution of krill schools varied. The small to medium-size procellariiform species were the best indicators of krill schools; large procellariiforms and coastal species were poor indicators. Pygoscelis penguins occurred at high densities only in the presence of krill schools. These responses are consistent with the constraints imposed by the metabolic requirements and reproductive strategies of each of these groups. Krill schools were detected near the sea surface throughout the day. Correlations between seabird density and the presence of krill during daylight hours suggest that diurnal foraging is important to the seabirds of this region.
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  • 72
    facet.materialart.
    Unknown
    Oxford Univ. Press
    In:  ICES Journal of Marine Science, 51 (3). pp. 299-313.
    Publication Date: 2020-07-29
    Description: Artificial selection processes associated with harvesting may operate over relatively short time scales in short-lived semelparous species. The ommastrephid squid Illex argentinus on the Patagonian Shelf is the target of a major fishery. Recent work has provided new information on the biological characteristics of squid in this fishery. That information has been utilized in the development of a model of the cohort dynamics and some of the within-seasons selective effects considered. The model results are consistent with earlier data from the shelf fisheries, supporting suggestions that the males nature and migrate earlier towards the spawning grounds than the females. Earlier maturation results in a smaller mean size in the spawning stock, while later maturation results in greater exposure to the fishery and a reduced numbers of individuals surviving to spawn. Under the current fishing regime greater egg production and a larger spermatophoric complex mass for the whole cohort is achieved by relatively late maturation. In general, however, the earlier maturation occurs, the earlier is the peak in total egg production. The within-season pattern of effort expenditure in the fishery can affect not only yield from the fishery but also the reproductive potential of the spawning stock. The management policy adopted for this fishery is likely to be conservative in terms of maintenance of a spawning stock, however, the potential for selective effects is larger and this may affect both yield and reproductive potential. The results are discussed in relation to short- and long-term effects in the fishery and the implications for future research requirements.
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  • 73
    Publication Date: 2020-07-20
    Description: Statolith morphology and microstructure were studied in two common species of panktonic cranchiid squids, Belonella borealis [four juveniles with mantle length (ML) 375–450 mm] and Galiteuthis phyllura (13 paralarvae and juveniles, ML 9–235mm), caught near the bottom and in pelagic layers over the continental slope of Siberia in the northwest Bering Sea. The total number of growth increments within the statoliths ranged from 277 to 294 in B.borealis and from 10 to 209 in G.phyllura. Assuming that these increments were produced daily, both species grow rapidly in length (daily growth rate = 1.13mm day−1 during the first 8–10 months of their juvenile phase in the mesopelagic layers, prior to migration into deeper waters for maturation.
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  • 74
    Publication Date: 2021-02-08
    Description: Continental hyperextension during magma-poor rifting at the Deep Galicia Margin is characterised by a complex pattern of faulting, thin continental fault blocks, and the serpentinisation, with local exhumation, of mantle peridotites along the S-reflector, interpreted as a detachment surface. In order to understand fully the evolution of these features, it is important to image seismically the structure and to model the velocity structure to the greatest resolution possible. Travel-time tomography models have revealed the long-wavelength velocity structure of this hyperextended domain, but are often insufficient to match accurately the short-wavelength structure observed in reflection seismic imaging. Here we demonstrate the application of two-dimensional (2D) time-domain acoustic full-waveform inversion to deep water seismic data collected at the Deep Galicia Margin, in order to attain a high resolution velocity model of continental hyperextension. We have used several quality assurance procedures to assess the velocity model, including comparison of the observed and modelled waveforms, checkerboard tests, testing of parameter and inversion strategy, and comparison with the migrated reflection image. Our final model exhibits an increase in the resolution of subsurface velocities, with particular improvement observed in the westernmost continental fault blocks, with a clear rotation of the velocity field to match steeply dipping reflectors. Across the S-reflector there is a sharpening in the velocity contrast, with lower velocities beneath S indicative of preferential mantle serpentinisation. This study supports the hypothesis that normal faulting acts to hydrate the upper mantle peridotite, observed as a systematic decrease in seismic velocities, consistent with increased serpentinisation. Our results confirm the feasibility of applying the full-waveform inversion method to sparse, deep water crustal datasets.
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  • 75
    Publication Date: 2020-02-06
    Description: Processes linked with the genesis, evolution and emplacement of silicic complexes in arcs are still poorly constrained. Of particular interest are the depth of magma production, the relative contribution of crystal fractionation versus crustal partial melting and the timescales involved. The Soufrière Volcanic Complex (SVC) on St Lucia is one of the largest silicic centres in the Lesser Antilles arc. Here we present the results of a detailed mineralogical study, including in situ Sr isotopes in plagioclase and in situ δ18O in dated zircons, of both SVC and Pre-SVC volcanic rocks to place constraints on the processes intrinsic to the development and evolution of the silicic complex. These data suggest that the production of silicic magma in the SVC occurs in two stages. The first stage involves differentiation of mafic magma by crustal assimilation and mineral fractionation in the middle–lower crust of the arc to produce magmas with intermediate compositions. These intermediate magmas are water-rich (∼7 wt %) and have high 87Sr/86Sr, Ba, Sr and La/Sm (∼5) compared with Pre-SVC lavas. Near-constant trace element and isotopic compositions throughout the SVC lifespan indicate that the same process was persistent over the last 600 kyr. In the second stage, the intermediate magmas are transferred to a shallower and more differentiated chamber (∼6 km depth). During ascent, any crystals or xenocrysts residual from stage one in the deeper chamber become fully resorbed and the magma crystallizes calcic amphibole microphenocrysts, followed by anorthite-rich plagioclase close to or at the water saturation depth. During mixing upon recharge within the shallow chamber, anorthite-rich plagioclase from the recharging magma is partially resorbed; so are the crystals in equilibrium with the resident differentiated magma. The recharge event probably causes chamber-wide convection. Mixing is thought to trigger eruption of the silicic complex magmas.
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  • 76
    Publication Date: 2020-02-06
    Description: Eukaryotic phytoplankton exhibit an enormous species richness, displaying a range of phylogenetic, morphological and physiological diversity. Yet, until recently, very little was known about the diversity, genetic variation and evolutionary processes within species and populations. An approach to explore this diversity and to understand evolution of phytoplankton is to use population genetics as a conceptual framework and methodology. Here, we discuss the patterns, processes and questions that population genetic studies have revealed in eukaryotic phytoplankton. First, we describe the main biological processes generating genetic variation. We specifically discuss the importance of life-cycle complexity for genetic and phenotypic diversity and consider how such diversity can be maintained during blooms when rapid asexual proliferation dominates. Next, we explore how genetic diversity is partitioned over time and space, with a focus on the processes shaping this structure, in particular selection and genetic exchange. Our aim is also to show how population genetics can be used to make inferences about realized dispersal and sexual recombination, as these processes are so difficult to study directly. Finally, we highlight important open questions and suggest promising avenues for future studies that will be made possible by new sequencing technologies
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  • 77
    facet.materialart.
    Unknown
    Oxford Univ. Press
    In:  ICES Journal of Marine Science, 74 (1). pp. 102-111.
    Publication Date: 2020-02-06
    Description: Marine spatial planning (MSP) is considered a valuable tool in the ecosystem-based management of marine areas. Predictive modelling may be applied in the MSP framework to obtain spatially explicit information about biodiversity patterns. The growing number of statistical approaches used for this purpose implies the urgent need for comparisons between different predictive techniques. In this study, we evaluated the performance of selected machine learning and regression-based methods that were applied for modelling fish community indices. We hypothesized that habitat features can influence fish assemblage and investigated the effect of environmental gradients on demersal fish diversity (species richness and Shannon–Weaver Index). We used fish data from the Baltic International Trawl Surveys (2001–2014) and maps of six potential predictors: bottom salinity, depth, seabed slope, growth season bottom temperature, seabed sediments and annual mean bottom current velocity. We compared the performance of six alternative modelling approaches: generalized linear models, generalized additive models, multivariate adaptive regression splines, support vector machines, boosted regression trees and random forests. We applied repeated 10-fold cross-validation, using accuracy as the measure of model quality. Finally, we selected random forest as the best performing algorithm and implemented it for the spatial prediction of fish diversity from the Baltic Proper to the Kattegat. To obtain information on the data reliability and confidence of the developed models, which are essential for MSP, we estimated the uncertainty of predictions with standard deviation of predictions obtained from all the trees in the ensemble random forest method. We showed how state-of-the-art predictive techniques, based on easily available data and simple Geographic Information System tools, can be used to obtain reliable spatial information about fish diversity. Our comparative work highlighted the potential of machine learning method to reduce prediction error in modelling of demersal fish diversity in the framework of MSP.
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  • 78
    facet.materialart.
    Unknown
    Oxford Univ. Press
    In:  Geophysical Journal International, 208 (1). pp. 449-467.
    Publication Date: 2020-02-06
    Description: The Mozambique Ridge, a prominent basement high in the southwestern Indian Ocean, consists of four major geomorphological segments associated with numerous phases of volcanic activity in the Lower Cretaceous. The nature and origin of the Mozambique Ridge have been intensely debated with one hypothesis suggesting a Large Igneous Province origin. High-resolution seismic reflection data reveal a large number of extrusion centres with a random distribution throughout the southern Mozambique Ridge and the nearby Transkei Rise. Intrabasement reflections emerge from the extrusion centres and are interpreted to represent massive lava flow sequences. Such lava flow sequences are characteristic of eruptions leading to the formation of continental and oceanic flood basalt provinces, hence supporting a Large Igneous Province origin of the Mozambique Ridge. We observe evidence for widespread post-sedimentary magmatic activity that we correlate with a southward propagation of the East African Rift System. Based on our volumetric analysis of the southern Mozambique Ridge we infer a rapid sequential emplacement between ∼131 and ∼125 Ma, which is similar to the short formation periods of other Large Igneous Provinces like the Agulhas Plateau.
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  • 79
    facet.materialart.
    Unknown
    Oxford Univ. Press
    In:  The Auk, 107 (4). pp. 678-688.
    Publication Date: 2020-05-13
    Description: Gray whales (Eschrichtius robustus) feeding in the northern Bering Sea produce prey-rich mud plumes that provide ephemeral foraging opportunities for seabirds. Approximately 67% of all gray whales were attended by birds. In four whale-associating bird species (Northern Fulmar, Fulmarus glacialis; Red Phalarope, Phalaropus fulicaria; Black-legged Kitti-wake, Rissa tridactyla; and Thick-billed Murre, Uria lomvia), from 17 to 87% of all individuals that we observed on the water or foraging were in the whales' mud plumes. The combined density of these same four species was strongly correlated with whale density over a broad range of spatial scales. The whale-associating seabirds exhibited species-specific patterns of foraging behavior at plumes, including differences in mean group size, mean residence time, and patterns of movement between plumes. Birds tended to form larger groups and to form more mixed-species flocks in association with whales. The association of marine birds with gray whales in the Bering Sea provides a model system for examining seabird interactions at fine-scale oceanographic patches and demonstrates the importance of these patches in shaping patterns of seabird distribution and behavior.
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  • 80
    Publication Date: 2020-02-06
    Description: The Nifonea submarine volcano rises 1000 m above the seafloor of the Vate Trough back-arc basin behind the New Hebrides island arc. This large volcanic edifice has a caldera of ∼8 km diameter and is connected to two ∼20 km long volcanic rift zones in the back-arc basin. We present new chemical and isotope data for volcanic glasses and whole-rocks from both the volcano and its rift zones. Lavas from Nifonea volcano show an evolution towards more incompatible element enrichment, with the most enriched lavas being the youngest eruption products on the caldera floor. These are products of significant fractional crystallization, show minor contamination by hydrothermal fluids (〈0·3%) and reflect mixing of melts derived from depleted upper mantle and melts from an enriched source similar to those occurring in the North Fiji Basin. The enrichment in Nb of these lavas is comparable with that of some lavas from the New Hebrides island arc (e.g. Mota Lava island), where these coexist with typical island arc basalts. The lavas erupted along the rift zones in the Vate Trough back-arc basin are relatively depleted in incompatible elements, indicating melting of depleted upper mantle with a minor addition of a sediment-derived fluid. Our observations suggest that the mantle beneath Vate Trough is heterogeneous on a small scale (〈20 km) and that the occurrence of these enriched and fertile mantle portions has a stronger control on melting processes than the influx from the subducting slab, as all samples were recovered at a similar distance from the trench.
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  • 81
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    Unknown
    Oxford Univ. Press
    In:  Journal of Plankton Research, 39 (5). pp. 772-780.
    Publication Date: 2020-02-06
    Description: The influence of winter on the selection of dominant taxa for the phytoplankton spring bloom was studied in batch culture experiments. Different natural phytoplankton assemblages from different phases of the temperate zone winter were exposed to varying periods of darkness (0, 6/7, 13 and 19 weeks) followed by a re-exposure to saturating light intensity for 14 days to experimentally simulate the onset of spring. The results showed that dark incubation has a strong effect on shaping the phytoplankton community composition. Many taxa disappeared in the absolute darkness. Dark survival ability might be an important contributing factor for the success of diatoms in spring. Different phytoplankton starting assemblages were dominated by the same bloom-forming diatoms, Skeletonema marinoi and Thalassosira spp., after dark incubation for only 6 weeks, irrespective of the high dissimilarities between phytoplankton communities. The growth capacity of surviving phytoplankton is almost unimpaired by darkness. Similar growth rates as that before darkness could be resumed for the surviving taxa with a potential lag time of 1–7 days dependent on taxon and the duration of darkness.
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  • 82
    facet.materialart.
    Unknown
    American Chemical Society (ACS)
    In:  Industrial & Engineering Chemistry Research, 56 (44). pp. 12755-12762.
    Publication Date: 2020-02-06
    Description: The discharges from industrial processes constitute the main source of copper contamination in aqueous ecosystems. In this study we investigated the capacity of different types of biochar (derived from chicken manure, eucalyptus, corncob, olive mill and pine sawdust) to remove copper from aqueous solution in a continuous-flow system. The flow rate of the system strongly influenced the amount of copper retained. The adsorption to the corncob biochar varied from 5.51 to 3.48 mg Cu g-1 as the flux decreased from 13 to 2.5 mL min-1. The physicochemical characteristics of biochar determine the copper retention capacity and the underlying immobilization mechanisms. Biochars with high inorganic contents retain the largest amounts of copper and may be suitable for using in water treatment systems to remove heavy metals. The copper retention capacity of the biochars ranged between ~1.3 and 26 mg g-1 and varied in the following order: chicken manure 〉 olive mill 〉〉 corncob 〉 eucalyptus 〉 sawdust pine.
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  • 83
    facet.materialart.
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    Oxford Univ. Press
    In:  ICES Journal of Marine Science, 74 (7). pp. 1855-1864.
    Publication Date: 2020-02-06
    Description: The general positive effect of warmer winters on the abundance of small-sized zooplankton in the following spring and early summer has been reported from different parts of the Baltic Sea, but the mechanism of this link is not clear. Although causal links cannot be deduced with confidence from observational data, sufficiently detailed analyses can nevertheless provide insights to the potential mechanisms. We present an example of such an analysis, scrutinizing the effects of winter and spring hydroclimate on the abundance of small-sized dominant calanoid copepods (Eurytemora affinis and Acartia spp.), using data from 2080 zooplankton samples collected over 55 years (1957–2012) from a shallow coastal habitat (Pärnu Bay, Gulf of Riga) in the Baltic Sea. Our results indicated that the milder winters brought about higher abundances, and reduced seasonality of small-sized copepods, whereas ambient sea surface temperature (SST) mostly affected the relative abundance of adult stages. The sliding window correlation tests revealed temporal shifts in the effects of controlling variables: with the continuous increase in SST, the effect of winter temperature on the abundance of Acartia spp. weakened. In contrast, E. affinis was consistently affected by SST, but the effect of winter temperature was more pronounced during the period of on average colder winters.
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  • 84
    Publication Date: 2021-02-08
    Description: Overfishing and rapid environmental shifts pose severe challenges to the resilience and viability of marine fish populations. To develop and implement measures that enhance species’ adaptive potential to cope with those pressures while, at the same time, ensuring sustainable exploitation rates is part of the central goal of fisheries management. Here, we argue that a combination of biophysical modelling and population genomic assessments offer ideal management tools to define stocks, their physical connectivity and ultimately, their short-term adaptive potential. To date, biophysical modelling has often been confined to fisheries ecology whereas evolutionary hypotheses remain rarely considered. When identified, connectivity patterns are seldom explored to understand the evolution and distribution of adaptive genetic variation, a proxy for species’ evolutionary potential. Here, we describe a framework that expands on the conventional seascape genetics approach by using biophysical modelling and population genomics. The goals are to identify connectivity patterns and selective pressures, as well as putative adaptive variants directly responding to the selective pressures and, ultimately, link both to define testable hypotheses over species response to shifting ecological conditions and overexploitation.
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  • 85
    Publication Date: 2018-02-20
    Description: Innate immunity is the front line of self-defense against microbial infection. After searching for natural substances that regulate innate immunity using an ex vivo Drosophila culture system, we identified a novel dimeric chromanone, gonytolide A, as an innate immune promoter from the fungus Gonytrichum sp. along with gonytolides B and C. Gonytolide A also increased TNF-α-stimulated production of IL-8 in human umbilical vein endothelial cells.
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  • 86
    facet.materialart.
    Unknown
    Oxford Univ. Press
    In:  Journal of Plankton Research, 15 (7). pp. 867-872.
    Publication Date: 2018-03-05
    Description: Mortality of two dogs, after exposure to water of a brackish lake on the German North Sea coast in 1990, is considered to be caused by a toxic Nodularia spumigena Mertens bloom.
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  • 87
    Publication Date: 2021-02-08
    Description: This study presents a new method (LBB) for the analysis of length frequency data from commercial catches. LBB works for species that grow throughout their lives, such as most commercially-important fish and invertebrates, and requires no input in addition to length frequency data. It estimates asymptotic length, length at first capture, relative natural mortality, and relative fishing mortality. Standard fisheries equations can then be used to approximate current exploited biomass relative to unexploited biomass. In addition, these parameters allow the estimation of length at first capture that would maximize catch and biomass for a given fishing effort, and estimation of a proxy for the relative biomass capable of producing maximum sustainable yields. Relative biomass estimates of LBB were not significantly different from the “true” values in simulated data and were similar to independent estimates from full stock assessments. LBB also presents a new indicator for assessing whether an observed size structure is indicative of a healthy stock. LBB results will obviously be misleading if the length frequency data do not represent the size composition of the exploited size range of the stock or if length frequencies resulting from the interplay of growth and mortality are masked by strong recruitment pulses.
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  • 88
    facet.materialart.
    Unknown
    Oxford Univ. Press
    In:  Journal of Plankton Research, 12 (5). pp. 1045-1057.
    Publication Date: 2020-07-20
    Description: The Rhynchoteuthion larvae of Illex argentinus resulting from summer spawning in North Patagonic shelf waters, its distribution and abundance, are described in this paper. The material was collected in the Argentine Sea (35–55°S) by means of plankton nets. The research cruises were made by the R/V Shinkai Maru and the R/V Walther Herwig during the period April 1978 to April 1979. The most important spawning ground of the summer spawning subpopulation is found in continental-shelf waters (between 43 and 46°S) during the period December-February. This area was established on the basis of both ripe (December) and spent females (February). The larvae which were caught during the same period, especially in March, confirmed the spawning area of this demographic unit. The larvae showed the length of the mantle (ML) to be from 1.2 to 6.5 mm. Tentacles were splitting in specimens from 5.0 to 6.5 mm ML (transition stage). When 7.0 mm ML or more, all specimens were juveniles and had their tentacles completely separated. Larvae were characterized as type C, following the proposal of Sato (1973) and Sato and Sawada (1974) in the Bulletin of the Shizuoka Prefectural Fisheries Experimental Station.
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  • 89
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    Unknown
    Oxford Univ. Press
    In:  ICES Journal of Marine Science, 49 (2). pp. 175-183.
    Publication Date: 2020-07-29
    Description: A joint research cruise (Japan-Argentina-Uruguay) was carried out in the South-western Atlantic during August-September 1989 in order to study the winter-spawning and hatchery areas of Illex argentinus, and also the migration pattern of the juveniles towards the continental shelf. A few Rhynchoteuthion larvae were found in subtropical waters of the Brazil Current, next to the Brazil-Malvinas confluence, and in the frontal zone with shelf water, but never at temperatures below 14°C. Large numbers of juveniles found in subantarctic waters (6–10°C) on the shelf were probably migrating southward from their hatchery grounds following the zooplankton concentrations on which they were feeding.
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  • 90
    facet.materialart.
    Unknown
    Oxford Univ. Press
    In:  ICES Journal of Marine Science, 50 (4). pp. 393-403.
    Publication Date: 2020-07-29
    Description: Ripe egg dimensions in the squid genus Illex are close to the minimum for cephalopods. The average diameter varies significantly depending on species (0.77–0.82 mm in I. coindeti , 0.75–0.88 mm in I. illecebrosus , and 0.96–1.04 mm in I. argentinus ), on geographical distribution intraspecifically, e.g. I. argentinus (0.96–0.97 mm in the shelf groups and 1.04 mm in the slope oceanic group), and between pre-spawning and spawning females of the summer-spawning shelf group of I. argentinus (0.97 and 0.92 mm, respectively). The potential fecundity (PF), defined as total oocyte stock both in the ovary and oviducts, depends on mantle length (ML in each species. It varies from 90 000 (ML = 150–160 mm) to 800 000 (ML = 230–250 mm) in I. coindeti , from 200 000 to 630 000 (ML = 220–280 mm) in I. illecebrosus , and from 75 000 (ML = 150–170 mm) to 1 200 000 (ML = 360–380 mm) in I. argentinus . It is possible to estimate the actual value of PF shortly before vitellogenesis begins and up to a start of spawning, when the diameter of the smallest oocytes exceeds 0.05 mm. The summer-spawning shelf females of I. argentinus release about of 70% of PF. Their spawning is intermittent and ripe egg production decreases over time with only a 50% replacement of the initial stock of vitelline oocytes and a decreasing volume of eggs at each release. Feeding activity decreases and the mantle wall and internal organs shrink once spawning commences. In spent animals, a degeneration of both vitelline and protoplasmic oocytes occurs. The squids genus Illex is one of typical r-strategists among the cephalopods.
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  • 91
    Publication Date: 2020-02-06
    Description: Marine sponges (phylum Porifera) are a diverse, phylogenetically deep-branching clade known for forming intimate partnerships with complex communities of microorganisms. To date, 16S rRNA gene sequencing studies have largely utilised different extraction and amplification methodologies to target the microbial communities of a limited number of sponge species, severely limiting comparative analyses of sponge microbial diversity and structure. Here, we provide an extensive and standardised dataset that will facilitate sponge microbiome comparisons across large spatial, temporal and environmental scales. Samples from marine sponges (n = 3569 specimens), seawater (n = 370), marine sediments (n = 65) and other environments (n = 29) were collected from different locations across the globe. This dataset incorporates at least 269 different sponge species, including several yet unidentified taxa. The V4 region of the 16S rRNA gene was amplified and sequenced from extracted DNA using standardised procedures. Raw sequences (total of 1.1 billion sequences) were processed and clustered with a) a standard protocol using QIIME closed-reference picking resulting in 39,543 Operational Taxonomic Units (OTU) at 97% sequence identity, b) a de novo protocol using Mothur resulting in 518,246 OTUs, and c) a new high-resolution Deblur protocol resulting in 83,908 unique bacterial sequences. Abundance tables, representative sequences, taxonomic classifications and metadata are provided. This dataset represents a comprehensive resource of sponge-associated microbial communities based on 16S rRNA gene sequences that can be used to address overarching hypotheses regarding host-associated prokaryotes, including host-specificity, convergent evolution, environmental drivers of microbiome structure and the sponge-associated rare biosphere.
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  • 92
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    Unknown
    Oxford Univ. Press
    In:  Geophysical Journal International, 212 (1). pp. 333-344.
    Publication Date: 2021-02-08
    Description: In this study, the complex frequency-shifted perfectly matched layer (CFS-PML) in stretching Cartesian coordinates, is successfully applied to three-dimensional (3D) frequency-domain marine controlled-source electromagnetic (CSEM) field modelling. The Dirichlet boundary, which is usually used within the traditional framework of EM modeling algorithms, assumes the electric or magnetic field values are zero at the boundaries. This requires the boundaries be sufficiently far away from the sources in the area of interest. To mitigate the boundary artifacts, a large modelling area may be necessary even though cell sizes are allowed to grow toward the boundaries due to the diffusion of the electromagnetic wave propagation. Compared with the conventional Dirichlet boundary, the PML boundary is preferred as the modelling area of interest could be restricted to the target region and only a few absorbing layers surrounding can effectively depress the artificial boundary effect without losing the numerical accuracy. Furthermore, for joint inversion of seismic and marine CSEM data, if we used the PML for CSEM field simulation instead of the conventional Dirichlet, the modeling area for these two different geophysical data collected from the same survey area could the same, which is convenient for joint inversion grid matching. We apply the CFS-PML boundary to 3D marine CSEM modelling by using the staggered finite-difference (SFD) discretization. Numerical test indicates that the modeling algorithm using the CFS-PML also shows good accuracy compared to the Dirichlet. Furthermore, the modeling algorithm using the CFS-PML shows advantages in computational time and memory saving than that using the Dirichlet boundary. For the 3D example in this study, the memory saving using the PML is nearly 42 % and the time saving is around 48% compared to using the Dirichlet.
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  • 93
    Publication Date: 2018-03-19
    Description: Total biomass and biomass of large taxonomic groups (polychaetes, molluscs, crustaceans, echinoderms) and species diversity of the macrofauna were determined for almost 200 North Sea stations sampled synoptically by seven vessels during Spring 1986 and for 120 additional stations sampled in earlier years by the Marine Laboratory in Aberdeen. There exists a clear and significant decreasing trend in biomass with latitude, both in total biomass and for the different taxonomic groups. Apart from latitude, sediment composition and chlorophyll a content of the sediment also infuence total biomass and biomass of most groups significantly. Biomass increases consistently in finer sediments and sediments with a higher chlorophyll a content. The same trends are found for the results within laboratories. Some interaction exists, indicating weak laboratory and zonal effects. Diversity, as measured by Hill's diversity index N1 = (exp H′) shows a clear and significant trend with latitude. Towards the north of the North Sea diversity increases considerably. The trend is also found for laboratories separately and is everywhere equally strong. Also longitude and depth show an effect on diversity. Sediment variables have no clear influence on diversity. Other diversity measures show the same trend but are more variable than N1,. Total density tends to increase towards the north, but sediment related variables have a larger influence. Mean individual weight becomes considerably smaller towards the northern part of the North Sea.
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  • 94
    Publication Date: 2018-03-21
    Description: In 1986 participants of the Benthos Ecology Working Group of ICES conducted a synoptic mapping of the infauna of the southern and central North Sea. Together with a mapping of the infauna of the northern North Sea by Eleftheriou and Basford (1989) this provides the database for the description of the benthic infauna of the whole North Sea in this paper. Division of the infauna into assemblages by TWINSPAN analysis separated northern assemblages from southern assemblages along the 70 m depth contour. Assemblages were further separated by the 30, 50 m and 100 m depth contour as well as by the sediment type. In addition to widely distributed species, cold water species do not occur further south than the northern edge of the Dogger Bank, which corresponds to the 50 m depth contour. Warm water species were not found north of the 100 m depth contour. Some species occur on all types of sediment but most are restricted to a special sedimentand therefore these species are limited in their distribution. The factors structuring species distributions and assemblages seem to be temperature, the influence of different water masses, e.g. Atlantic water, the type of sediment and the food supply to the benthos. Eleftheriou, A. and Basford, D. J. Journal of the Marine Biological Association of the UK, 69: 123–143.
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  • 95
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    Unknown
    Oxford Univ. Press
    In:  Journal of Plankton Research, 22 . pp. 2015-2038.
    Publication Date: 2018-05-30
    Description: Long-term dynamics (1959–1997) of the copepod species Pseudocalanus elongatus, Temora longicornis, Acartia spp. and Centropages hamatus, as well as the taxonomic group of cladocerans, are described for the open sea areas of the central Baltic Sea. Differences between areas, i.e. Bornholm Basin, Gdansk Deep and Gotland Basin, as well as between 5 year periods, were investigated by means of Analysis of Variance (ANOVA). No significant differences in mesozooplankton biomass between areas were found. On the other hand, clear time-trends could be demonstrated and related to salinity and temperature, with P.elongatus biomass mainly dependent on salinity and T.longicornis, Acartia spp. and cladocerans biomasses dependent, to a large extent, on thermal conditions. Decreasing salinities since the early 1980s due to a lack of major inflows of highly saline water from the North Sea and increased river run-off, both triggered by meteorological conditions, obviously caused a decrease in biomass of P.elongatus. Contrarily, the standing stocks of the other abundant copepod species and cladocerans followed, to a large degree, the temperature development and showed, in general, an increase. The shift in species composition during this period is considered to be a reason for decreasing growth rates of Baltic herring (Clupea harengus) since the early 1980s, and for sprat (Sprattus sprattus) since the early 1990s. Generally, it is suggested that low mesozooplankton biomasses in the 1990s were caused, at least partially, by amplified predation by clupeid fish stocks.
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  • 96
    Publication Date: 2019-01-22
    Description: The present study analyses the distribution of cephalopod paralarvae off the Portuguese coast. The effects of temporal and physical variables on Loligo vulgaris, Octopus vulgaris, sepiolid and ommastrephid abundances are analysed with generalized linear models. Their distribution patterns are discussed in relation to mesoscale features, including currents, thermal fronts and coastal upwelling cross-shelf transport, prevailing in the western Iberia upwelling system. Paralarvae of the neritic species occur during a considerably extended period of the year with two or three abundance peaks within the highly productive upwelling system of the western Portuguese coast and contrasting with the Gulf of Cadiz area. Temperature and upwelling were shown to be the most important variables in modulating seasonality and distribution of these paralarvae. The influence of the physical environment is particularly pronounced for the paralarvae of O. vulgaris, following distinct patterns according to the oceanography of the western Iberia and the Gulf of Cadiz systems. The paralarvae of oceanic species, which in many cases have their northern limit of distribution at these latitudes, were mainly found in the southern part of the sampling area. The distribution of these species indicates that the prevailing oceanographic features of the Gulf of Cadiz system, especially fronts, together with temperature act as boundaries to geographic dispersal, contributing to an area of high cephalopod biodiversity in the southern Portuguese waters.
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  • 97
    Publication Date: 2019-09-23
    Description: Post-collisional magmatism in the southern Iberian and northwestern African continental margins contains important clues for the understanding of a possible causal connection between movements in the Earth's upper mantle, the uplift of continental lithosphere and the origin of circum-Mediterranean igneous activity. Systematic geochemical and geochronological studies (major and trace element, Sr–Nd–Pb-isotope analysis and laser 40Ar/39Ar-age dating) on igneous rocks provide constraints for understanding the post-collisional history of the southern Iberian and northwestern African continental margins. Two groups of magmatic rocks can be distinguished: (1) an Upper Miocene to Lower Pliocene (8·2–4·8 Ma), Si–K-rich group including high-K (calc-alkaline) and shoshonitic series rocks; (2) an Upper Miocene to Pleistocene (6·3–0·65 Ma), Si-poor, Na-rich group including basanites and alkali basalts to hawaiites and tephrites. Mafic samples from the Si–K-rich group generally show geochemical affinities with volcanic rocks from active subduction zones (e.g. Izu–Bonin and Aeolian island arcs), whereas mafic samples from the Si-poor, Na-rich group are geochemically similar to lavas found in intraplate volcanic settings derived from sub-lithospheric mantle sources (e.g. Canary Islands). The transition from Si-rich (subduction-related) to Si-poor (intraplate-type) magmatism between 6·3 Ma (first alkali basalt) and 4·8 Ma (latest shoshonite) can be observed both on a regional scale and in individual volcanic systems. Si–K-rich and Si-poor igneous rocks from the continental margins of southern Iberia and northwestern Africa are, respectively, proposed to have been derived from metasomatized subcontinental lithosphere and sub-lithospheric mantle that was contaminated with plume material. A three-dimensional geodynamic model for the westernmost Mediterranean is presented in which subduction of oceanic lithosphere is inferred to have caused continental-edge delamination of subcontinental lithosphere associated with upwelling of plume-contaminated sub-lithospheric mantle and lithospheric uplift. This process may operate worldwide in areas where subduction-related and intraplate-type magmatism are spatially and temporally associated.
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  • 98
    Publication Date: 2019-02-01
    Description: Ocean acidification is an escalating environmental issue and associated changes in the ocean carbonate system have implications for many calcifying organisms. The present study followed the growth of Sepia officinalis from early-stage embryos, through hatching, to 7-week-old juveniles. Responses of cuttlefish to elevated pCO(2) (hypercapnia) were investigated to test the impacts of near-future and extreme ocean acidification conditions on growth, developmental time, oxygen consumption, and yolk utilization as proxies for individual fitness. We further examined gross morphological characteristics of the internal calcareous cuttlebone to determine whether embryonically secreted shell lamellae are impacted by environmental hypercapnia. Embryonic growth was reduced and hatching delayed under elevated pCO(2), both at environmentally relevant levels (0.14 kPa pCO(2) similar to predicted ocean conditions in 2100) and extreme conditions (0.40 kPa pCO(2)). Comparing various metrics from control and intermediate treatments generally showed no significant difference in experimental measurements. Yet, results from the high pCO(2) treatment showed significant changes compared with controls and revealed a consistent general trend across the three treatment levels. The proportion of animal mass contributed by the cuttlebone increased in both elevated pCO(2) treatments. Gross cuttlebone morphology was affected under such conditions and cuttlebones of hypercapnic individuals were proportionally shorter. Embryonic shell morphology was maintained consistently in all treatments, despite compounding hypercapnia in the perivitelline fluid; however, post-hatching, hypercapnic animals developed denser cuttlebone laminae in shorter cuttlebones. Juvenile cuttlefish in acidified environments thus experience lower growth and yet increased calcification of their internal shell. The results of this study support recent findings that early cuttlefish life stages are more vulnerable towards hypercapnia than juveniles and adults, which may have negative repercussions on the biological fitness of cuttlefish hatchlings in future oceans.
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  • 99
    facet.materialart.
    Unknown
    Oxford Univ. Press
    In:  ICES Journal of Marine Science, 68 (5). pp. 813-822.
    Publication Date: 2019-09-23
    Description: In 1999, marine protected areas (MPAs) were implemented along the west coast of the Big Island of Hawaii, closing ~35% of the coastline to aquarium fishing. Catch per unit effort and total catch of the most commonly targeted fish, yellow tang (Zebrasoma flavescens), have increased since the implementation of the MPAs, yet its abundance has declined by 45% in areas open to aquarium fishing between 1999 and 2007. How effort allocation, harvesting efficiencies, and job satisfaction influence catch productivity and selectivity in West Hawaii’s aquarium fishery are investigated, and how these dynamics explain the discrepancy between catch rates and relative abundance for yellow tang is discussed. Cross-sectional fisher questionnaires, semi-structured fisher interviews, and in situ and ex situ catch analyses were performed. The results indicate that fishers dive deeper when reef fish recruitment is perceived as weak, increase harvest efficiency with larger fishing teams, and intensively harvest “coral-friendly” reef fish to supply the global aquarium fish trade. Experienced fishers were less likely to exit the fishery, and job satisfaction was high despite declining fish stocks. These findings may help explain harvesting efficiencies and fleet investment, underscore the importance for evaluating fisher behaviours, and have potential management implications for other aquarium fisheries.
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  • 100
    Publication Date: 2019-09-23
    Description: The sudden occurrence of the ctenophore Mnemiopsis leidyi has been reported recently from different regions of the Baltic Sea and it has been suggested that the species has invaded the whole basin. Here we provide the first set of quantitative data of seasonal diet composition and life history traits of M. leidyi and its predatory role in the pelagic ecosystem of the Western Baltic Sea. The size structure of the species appeared to be dominated by small size classes and only a few adults were as large as those reported in the native region of the species and in other invaded areas. We show that the species has a high preference for small-sized and slow swimming prey, mainly during the winter low temperature period. Barnacle nauplii appeared to be the main source of carbon for the over-wintering population of M. leidyi. A preference for copepods was only found during August when these prey contributed up to 20% of the gut composition. In summer, planula larvae of the jellyfish Aurelia aurita were the most abundant prey in the gut content (feeding rate of 621 ind. ctenophore−1day−1). We further found that at highest densities of the species, in summer, a significant predation on its larvae occurs, this being the major carbon source of adults. Overall, these results are discussed in the context of trade-offs M. leidyi faces in the new environment and adverse environmental conditions, which are likely forcing the species toward reduced sizes and also probably reducing its potential predatory impact in the Baltic Sea.
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