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  • *Ecosystem
  • Nature Publishing Group (NPG)  (47)
  • American Chemical Society (ACS)
  • 2015-2019  (47)
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  • 1
    Publication Date: 2015-05-29
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Limardo, Alexander J -- Worden, Alexandra Z -- England -- Nature. 2015 Jun 4;522(7554):36-7. doi: 10.1038/nature14530. Epub 2015 May 27.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Ocean Sciences, University of California, Santa Cruz, California 95064, USA, and at the Monterey Bay Aquarium Research Institute, Moss Landing, California. ; 1] Department of Ocean Sciences, University of California, Santa Cruz, California 95064, USA, and at the Monterey Bay Aquarium Research Institute, Moss Landing, California. [2] Canadian Institute for Advanced Research, Toronto, Canada.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26017309" target="_blank"〉PubMed〈/a〉
    Keywords: Diatoms/*metabolism/*microbiology ; *Ecosystem ; Indoleacetic Acids/*metabolism ; Phytoplankton/*metabolism/*microbiology ; Rhodobacteraceae/*metabolism
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2015-05-23
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Zanne, Amy E -- Tank, David C -- Cornwell, William K -- Eastman, Jonathan M -- Smith, Stephen A -- FitzJohn, Richard G -- McGlinn, Daniel J -- O'Meara, Brian C -- Moles, Angela T -- Reich, Peter B -- Royer, Dana L -- Soltis, Douglas E -- Stevens, Peter F -- Westoby, Mark -- Wright, Ian J -- Aarssen, Lonnie -- Bertin, Robert I -- Calaminus, Andre -- Govaerts, Rafael -- Hemmings, Frank -- Leishman, Michelle R -- Oleksyn, Jacek -- Soltis, Pamela S -- Swenson, Nathan G -- Warman, Laura -- Beaulieu, Jeremy M -- England -- Nature. 2015 May 21;521(7552):E6-7. doi: 10.1038/nature14394.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉1] Department of Biological Sciences, George Washington University, Washington DC 20052, USA. [2] Center for Conservation and Sustainable Development, Missouri Botanical Garden, St Louis, Missouri 63121, USA. ; 1] Department of Biological Sciences, University of Idaho, Moscow, Idaho 83844, USA. [2] Institute for Bioinformatics and Evolutionary Studies, University of Idaho, Moscow, Idaho 83844, USA. ; 1] Department of Ecological Sciences, Systems Ecology, de Boelelaan 1085, 1081 HV Amsterdam, The Netherlands. [2] Evolution &Ecology Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales 2052, Australia. ; Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan 48109, USA. ; 1] Department of Zoology and Biodiversity Research Centre, University of British Columbia, Vancouver, British Columbia V6T1Z4, Canada. [2] Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia. ; Department of Biology, College of Charleston, Charleston, South Carolina 29424, USA. ; Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, Tennessee 37996, USA. ; Evolution &Ecology Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales 2052, Australia. ; 1] Department of Forest Resources, University of Minnesota, St Paul, Minnesota 55108, USA. [2] Hawkesbury Institute for the Environment, University of Western Sydney, Penrith, New South Wales 2751, Australia. ; Department of Earth and Environmental Sciences, Wesleyan University, Middletown, Connecticut 06459, USA. ; 1] Department of Biology, University of Florida, Gainesville, Florida 32611, USA. [2] Florida Museum of Natural History, University of Florida, Gainesville, Florida 32611, USA. [3] Genetics Institute, University of Florida, Gainesville, Florida 32611, USA. ; Department of Biology, University of Missouri-St Louis, St Louis, Missouri 63121, USA. ; Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia. ; Department of Biology, Queen's University, Kingston, Ontario K7L 3N6, Canada. ; Department of Biology, College of the Holy Cross, Worcester, Massachusetts 01610, USA. ; Department of Biology, University of Florida, Gainesville, Florida 32611, USA. ; Royal Botanic Gardens, Kew, Richmond TW9 3AB, UK. ; 1] Department of Forest Resources, University of Minnesota, St Paul, Minnesota 55108, USA. [2] Polish Academy of Sciences, Institute of Dendrology, 62-035 Kornik, Poland. ; 1] Florida Museum of Natural History, University of Florida, Gainesville, Florida 32611, USA. [2] Genetics Institute, University of Florida, Gainesville, Florida 32611, USA. ; Department of Plant Biology and Ecology, Evolutionary Biology and Behavior, Program, Michigan State University, East Lansing, Michigan 48824, USA. ; 1] Evolution &Ecology Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, New South Wales 2052, Australia. [2] Institute of Pacific Islands Forestry, USDA Forest Service, Hilo, Hawaii 96720, USA. ; National Institute for Mathematical &Biological Synthesis, University of Tennessee, Knoxville, Tennessee 37996, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25993971" target="_blank"〉PubMed〈/a〉
    Keywords: Angiosperms/*anatomy & histology/*physiology ; *Biological Evolution ; *Cold Climate ; *Ecosystem ; *Freezing ; Xylem/*anatomy & histology
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    Electronic ISSN: 1476-4687
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  • 3
    Publication Date: 2015-02-06
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Pandolfi, John M -- England -- Nature. 2015 Feb 5;518(7537):43-4. doi: 10.1038/nature14196. Epub 2015 Jan 14.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉School of Biological Sciences and the Australian Research Council Centre of Excellence for Coral Reef Studies, University of Queensland, Brisbane, Queensland 4072, Australia.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25652993" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Anthozoa/*growth & development/*physiology ; *Climate Change ; *Coral Reefs ; *Ecosystem
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 4
    Publication Date: 2015-04-10
    Description: Continuing degradation of coral reef ecosystems has generated substantial interest in how management can support reef resilience. Fishing is the primary source of diminished reef function globally, leading to widespread calls for additional marine reserves to recover fish biomass and restore key ecosystem functions. Yet there are no established baselines for determining when these conservation objectives have been met or whether alternative management strategies provide similar ecosystem benefits. Here we establish empirical conservation benchmarks and fish biomass recovery timelines against which coral reefs can be assessed and managed by studying the recovery potential of more than 800 coral reefs along an exploitation gradient. We show that resident reef fish biomass in the absence of fishing (B0) averages approximately 1,000 kg ha(-1), and that the vast majority (83%) of fished reefs are missing more than half their expected biomass, with severe consequences for key ecosystem functions such as predation. Given protection from fishing, reef fish biomass has the potential to recover within 35 years on average and less than 60 years when heavily depleted. Notably, alternative fisheries restrictions are largely (64%) successful at maintaining biomass above 50% of B0, sustaining key functions such as herbivory. Our results demonstrate that crucial ecosystem functions can be maintained through a range of fisheries restrictions, allowing coral reef managers to develop recovery plans that meet conservation and livelihood objectives in areas where marine reserves are not socially or politically feasible solutions.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉MacNeil, M Aaron -- Graham, Nicholas A J -- Cinner, Joshua E -- Wilson, Shaun K -- Williams, Ivor D -- Maina, Joseph -- Newman, Steven -- Friedlander, Alan M -- Jupiter, Stacy -- Polunin, Nicholas V C -- McClanahan, Tim R -- England -- Nature. 2015 Apr 16;520(7547):341-4. doi: 10.1038/nature14358. Epub 2015 Apr 8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉1] Australian Institute of Marine Science, PMB 3 Townsville MC, Townsville, Queensland 4810, Australia [2] Department of Mathematics and Statistics, Dalhousie University, Halifax, Nova Scotia B3H 3J5, Canada [3] Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland 4811, Australia. ; Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland 4811, Australia. ; 1] Department of Parks and Wildlife, Kensington, Perth, Western Australia 6151, Australia [2] Oceans Institute, University of Western Australia, Crawley, Western Australia 6009, Australia. ; Coral Reef Ecosystems Division, NOAA Pacific Islands Fisheries Science Center, Honolulu, Hawaii 96818, USA. ; 1] Australian Research Council Centre of Excellence for Environmental Decisions (CEED), University of Queensland, Brisbane, St Lucia, Queensland 4074, Australia [2] Wildlife Conservation Society, Marine Programs, Bronx, New York 10460, USA. ; School of Marine Science and Technology, Newcastle University, Newcastle upon Tyne NE1 7RU, UK. ; 1] Fisheries Ecology Research Lab, Department of Biology, University of Hawaii, Honolulu, Hawaii 96822, USA [2] Pristine Seas-National Geographic, Washington DC 20036, USA. ; Wildlife Conservation Society, Marine Programs, Bronx, New York 10460, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25855298" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Biodiversity ; Biomass ; Conservation of Natural Resources/*methods/statistics & numerical data/*trends ; *Coral Reefs ; *Ecosystem ; Fisheries/*methods/standards/*statistics & numerical data ; Fishes/*physiology ; Herbivory ; Population Dynamics ; Predatory Behavior ; Time Factors
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  • 5
    Publication Date: 2015-06-13
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Magnan, Alexandre -- Duvat, Virginie -- England -- Nature. 2015 Jun 11;522(7555):156. doi: 10.1038/522156b.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute for Sustainable Development and International Relations (IDDRI), Sciences Po, Paris, France. ; Littoral, Environment and Societies Research Unit (LIENSs, UMR 7266), University of La Rochelle and CNRS, La Rochelle, France.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26062500" target="_blank"〉PubMed〈/a〉
    Keywords: Agriculture ; Animals ; Anthozoa ; *Ecosystem ; Fisheries ; Mining/*legislation & jurisprudence ; Pacific Ocean ; Phosphates/*isolation & purification ; Polynesia
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    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 6
    Publication Date: 2015-01-22
    Description: Climate-induced coral bleaching is among the greatest current threats to coral reefs, causing widespread loss of live coral cover. Conditions under which reefs bounce back from bleaching events or shift from coral to algal dominance are unknown, making it difficult to predict and plan for differing reef responses under climate change. Here we document and predict long-term reef responses to a major climate-induced coral bleaching event that caused unprecedented region-wide mortality of Indo-Pacific corals. Following loss of 〉90% live coral cover, 12 of 21 reefs recovered towards pre-disturbance live coral states, while nine reefs underwent regime shifts to fleshy macroalgae. Functional diversity of associated reef fish communities shifted substantially following bleaching, returning towards pre-disturbance structure on recovering reefs, while becoming progressively altered on regime shifting reefs. We identified threshold values for a range of factors that accurately predicted ecosystem response to the bleaching event. Recovery was favoured when reefs were structurally complex and in deeper water, when density of juvenile corals and herbivorous fishes was relatively high and when nutrient loads were low. Whether reefs were inside no-take marine reserves had no bearing on ecosystem trajectory. Although conditions governing regime shift or recovery dynamics were diverse, pre-disturbance quantification of simple factors such as structural complexity and water depth accurately predicted ecosystem trajectories. These findings foreshadow the likely divergent but predictable outcomes for reef ecosystems in response to climate change, thus guiding improved management and adaptation.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Graham, Nicholas A J -- Jennings, Simon -- MacNeil, M Aaron -- Mouillot, David -- Wilson, Shaun K -- England -- Nature. 2015 Feb 5;518(7537):94-7. doi: 10.1038/nature14140. Epub 2015 Jan 14.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland 4811 Australia. ; 1] Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft NR33 OHT, UK [2] School of Environmental Sciences, University of East Anglia, Norwich NR4 7TJ, UK. ; 1] Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland 4811 Australia [2] Australian Institute of Marine Science, PMB 3 Townsville MC, Townsville, Queensland 4810, Australia. ; 1] Australian Research Council Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland 4811 Australia [2] ECOSYM, UMR CNRS-UM2 5119, Universite Montpellier 2, 34095 Montpellier Cedex, France. ; 1] Department of Parks and Wildlife, Kensington, Perth, Western Australia 6151, Australia [2] School of Plant Biology, Oceans Institute, University of Western Australia, Crawley, Western Australia 6009, Australia.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25607371" target="_blank"〉PubMed〈/a〉
    Keywords: Acclimatization ; Animals ; Anthozoa/*growth & development/*physiology ; Biodiversity ; *Climate Change ; *Coral Reefs ; *Ecosystem ; Fishes/physiology ; Indian Ocean ; Pacific Ocean ; Population Dynamics ; Seawater/analysis ; Seaweed/physiology ; Seychelles ; Symbiosis ; Tropical Climate
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    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 7
    Publication Date: 2015-02-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Di Lorenzo, Emanuele -- England -- Nature. 2015 Feb 19;518(7539):310-1. doi: 10.1038/518310a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉School of Earth and Atmospheric Sciences, Georgia Institute of Technology, Atlanta, Georgia 30332-0340, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25693560" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Climate Change ; *Ecosystem ; *Water Movements
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    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 8
    Publication Date: 2015-03-06
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kotiaho, Janne S -- England -- Nature. 2015 Mar 5;519(7541):33. doi: 10.1038/519033a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉University of Jyvaskyla, Finland.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25739622" target="_blank"〉PubMed〈/a〉
    Keywords: Biodiversity ; Conservation of Natural Resources/*methods/*statistics & numerical data ; *Ecosystem ; Finland ; Forestry/methods/statistics & numerical data ; Forests
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    Electronic ISSN: 1476-4687
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  • 9
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    Nature Publishing Group (NPG)
    Publication Date: 2015-12-04
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Massante, Jhonny Capichoni -- England -- Nature. 2015 Dec 3;528(7580):39. doi: 10.1038/528039c.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Federal University Fluminense, Niteroi, Rio de Janeiro, Brazil.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26632581" target="_blank"〉PubMed〈/a〉
    Keywords: Biodiversity ; Cities ; *Disasters/prevention & control ; *Ecosystem ; Humans ; *Mining ; Rainforest ; Water Pollutants/*adverse effects ; Water Supply
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    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 10
    Publication Date: 2015-05-23
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Edwards, Erika J -- de Vos, Jurriaan M -- Donoghue, Michael J -- England -- Nature. 2015 May 21;521(7552):E5-6. doi: 10.1038/nature14393.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Ecology and Evolutionary Biology, Brown University, 80 Waterman St, Box G-W, Providence, Rhodes Island 02912, USA. ; Department of Ecology and Evolutionary Biology, Yale University, PO Box 208105, New Haven, Connecticut 06520, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25993970" target="_blank"〉PubMed〈/a〉
    Keywords: Angiosperms/*anatomy & histology/*physiology ; *Biological Evolution ; *Cold Climate ; *Ecosystem ; *Freezing ; Xylem/*anatomy & histology
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    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 11
    Publication Date: 2015-04-10
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Dulvy, Nicholas K -- Kindsvater, Holly K -- England -- Nature. 2015 Apr 16;520(7547):304-5. doi: 10.1038/nature14384. Epub 2015 Apr 8.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biological Sciences, Simon Fraser University, Burnaby, British Columbia V5A 1S6, Canada.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25855291" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Conservation of Natural Resources/*methods/*trends ; *Coral Reefs ; *Ecosystem ; Fisheries/*methods/*statistics & numerical data ; Fishes/*physiology
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 12
    Publication Date: 2015-09-04
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cord, Anna F -- Seppelt, Ralf -- Turner, Woody -- England -- Nature. 2015 Sep 3;525(7567):33. doi: 10.1038/525033a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Helmholtz Centre for Environmental Research (UFZ), Leipzig, Germany. ; NASA, Washington DC, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26333459" target="_blank"〉PubMed〈/a〉
    Keywords: Biodiversity ; Biofuels/supply & distribution ; Conservation of Natural Resources/*statistics & numerical data ; Ecology/*methods ; *Ecosystem ; Environmental Monitoring/instrumentation/*methods ; *Goals ; *Spacecraft ; United Nations
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  • 13
    Publication Date: 2015-05-21
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bergstrom, Carl T -- Kerr, Benjamin -- England -- Nature. 2015 May 28;521(7553):431-2.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25992542" target="_blank"〉PubMed〈/a〉
    Keywords: Anti-Bacterial Agents/*biosynthesis/*metabolism ; *Ecosystem ; *Models, Biological ; *Soil Microbiology
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    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 14
    Publication Date: 2015-02-27
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Miao, Xin -- Tang, Yanhong -- Wong, Christina W Y -- England -- Nature. 2015 Feb 26;518(7540):483. doi: 10.1038/518483d.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Harbin Institute of Technology, Harbin, China. ; Northeast Agricultural University, Harbin, China. ; The Hong Kong Polytechnic University, Kowloon, Hong Kong.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25719657" target="_blank"〉PubMed〈/a〉
    Keywords: China ; *Ecosystem ; Environmental Policy/economics/*legislation & jurisprudence ; Environmental Pollution/*analysis/economics/*legislation & ; jurisprudence/prevention & control ; Human Migration ; Industrial Waste/analysis/economics/legislation & jurisprudence ; Industry/*legislation & jurisprudence/trends ; *Poverty
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  • 15
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    Nature Publishing Group (NPG)
    Publication Date: 2015-09-04
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2015 Sep 3;525(7567):5. doi: 10.1038/525005b.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26333434" target="_blank"〉PubMed〈/a〉
    Keywords: Agricultural Irrigation/methods/trends ; Animals ; Birds ; California ; Droughts/*statistics & numerical data ; Ecology/methods/*trends ; *Ecosystem ; Fires ; Fishes ; Groundwater/analysis ; *Water Supply/analysis/statistics & numerical data ; Wetlands
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  • 16
    Publication Date: 2015-04-10
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Neumann, Peter -- England -- Nature. 2015 Apr 9;520(7546):157. doi: 10.1038/520157a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Bee Health, University of Bern, Switzerland.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25855445" target="_blank"〉PubMed〈/a〉
    Keywords: Academies and Institutes ; Agriculture/methods ; Animals ; Bees/drug effects/physiology ; *Ecosystem ; Europe ; Insecticides/*adverse effects ; Pollination ; Receptors, Nicotinic/metabolism ; Risk Assessment
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  • 17
    Publication Date: 2015-02-20
    Description: The timing and strength of wind-driven coastal upwelling along the eastern margins of major ocean basins regulate the productivity of critical fisheries and marine ecosystems by bringing deep and nutrient-rich waters to the sunlit surface, where photosynthesis can occur. How coastal upwelling regimes might change in a warming climate is therefore a question of vital importance. Although enhanced land-ocean differential heating due to greenhouse warming has been proposed to intensify coastal upwelling by strengthening alongshore winds, analyses of observations and previous climate models have provided little consensus on historical and projected trends in coastal upwelling. Here we show that there are strong and consistent changes in the timing, intensity and spatial heterogeneity of coastal upwelling in response to future warming in most Eastern Boundary Upwelling Systems (EBUSs). An ensemble of climate models shows that by the end of the twenty-first century the upwelling season will start earlier, end later and become more intense at high but not low latitudes. This projected increase in upwelling intensity and duration at high latitudes will result in a substantial reduction of the existing latitudinal variation in coastal upwelling. These patterns are consistent across three of the four EBUSs (Canary, Benguela and Humboldt, but not California). The lack of upwelling intensification and greater uncertainty associated with the California EBUS may reflect regional controls associated with the atmospheric response to climate change. Given the strong linkages between upwelling and marine ecosystems, the projected changes in the intensity, timing and spatial structure of coastal upwelling may influence the geographical distribution of marine biodiversity.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wang, Daiwei -- Gouhier, Tarik C -- Menge, Bruce A -- Ganguly, Auroop R -- England -- Nature. 2015 Feb 19;518(7539):390-4. doi: 10.1038/nature14235.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Sustainability and Data Sciences Laboratory, Department of Civil and Environmental Engineering, Northeastern University, Boston, Massachusetts 02115, USA. ; Department of Marine and Environmental Sciences, Marine Science Center, Northeastern University, Nahant, Massachusetts 01908, USA. ; Department of Integrative Biology, Oregon State University, 3029 Cordley Hall, Corvallis, Oregon 97331, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25693571" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Aquatic Organisms/physiology ; Atlantic Ocean ; *Climate Change ; *Ecosystem ; Models, Theoretical ; Pacific Ocean ; Seasons ; Seawater/analysis ; Temperature ; *Water Movements ; Wind
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  • 18
    Publication Date: 2015-05-29
    Description: Interactions between primary producers and bacteria impact the physiology of both partners, alter the chemistry of their environment, and shape ecosystem diversity. In marine ecosystems, these interactions are difficult to study partly because the major photosynthetic organisms are microscopic, unicellular phytoplankton. Coastal phytoplankton communities are dominated by diatoms, which generate approximately 40% of marine primary production and form the base of many marine food webs. Diatoms co-occur with specific bacterial taxa, but the mechanisms of potential interactions are mostly unknown. Here we tease apart a bacterial consortium associated with a globally distributed diatom and find that a Sulfitobacter species promotes diatom cell division via secretion of the hormone indole-3-acetic acid, synthesized by the bacterium using both diatom-secreted and endogenous tryptophan. Indole-3-acetic acid and tryptophan serve as signalling molecules that are part of a complex exchange of nutrients, including diatom-excreted organosulfur molecules and bacterial-excreted ammonia. The potential prevalence of this mode of signalling in the oceans is corroborated by metabolite and metatranscriptome analyses that show widespread indole-3-acetic acid production by Sulfitobacter-related bacteria, particularly in coastal environments. Our study expands on the emerging recognition that marine microbial communities are part of tightly connected networks by providing evidence that these interactions are mediated through production and exchange of infochemicals.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Amin, S A -- Hmelo, L R -- van Tol, H M -- Durham, B P -- Carlson, L T -- Heal, K R -- Morales, R L -- Berthiaume, C T -- Parker, M S -- Djunaedi, B -- Ingalls, A E -- Parsek, M R -- Moran, M A -- Armbrust, E V -- England -- Nature. 2015 Jun 4;522(7554):98-101. doi: 10.1038/nature14488. Epub 2015 May 27.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉1] School of Oceanography, University of Washington, Seattle, Washington 98195, USA [2] Chemistry Faculty, New York University Abu Dhabi, PO Box 129188, Abu Dhabi, United Arab Emirates. ; Department of Microbiology, University of Washington, Seattle, Washington 98195, USA. ; School of Oceanography, University of Washington, Seattle, Washington 98195, USA. ; Department of Microbiology, University of Georgia, Athens, Georgia 30602, USA. ; Department of Marine Science, University of Georgia, Athens, Georgia 30602, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26017307" target="_blank"〉PubMed〈/a〉
    Keywords: Diatoms/cytology/genetics/*metabolism/*microbiology ; *Ecosystem ; Indoleacetic Acids/*metabolism ; Metabolomics ; Molecular Sequence Data ; Oceans and Seas ; Photosynthesis ; Phytoplankton/cytology/genetics/*metabolism/*microbiology ; Rhodobacteraceae/genetics/*metabolism ; Seawater/chemistry ; Transcriptome ; Tryptophan/metabolism
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  • 19
    Publication Date: 2016-02-18
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Huete, Alfredo -- England -- Nature. 2016 Mar 10;531(7593):181-2. doi: 10.1038/nature17301. Epub 2016 Feb 17.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Plant Functional Biology and Climate Change Cluster, University of Technology Sydney, Ultimo, New South Wales 2007, Australia.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26886792" target="_blank"〉PubMed〈/a〉
    Keywords: *Acclimatization ; *Climate Change ; *Ecosystem ; *Geographic Mapping ; *Plant Physiological Phenomena
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  • 20
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    Unknown
    Nature Publishing Group (NPG)
    Publication Date: 2016-04-21
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Caron, David A -- England -- Nature. 2016 Apr 28;532(7600):444-5. doi: 10.1038/nature17892. Epub 2016 Apr 20.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biological Sciences, University of Southern California, Los Angeles, California 90089-0371, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/27096370" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Aquatic Organisms/*metabolism ; *Biomass ; *Biota ; Carbon/*metabolism ; *Ecosystem ; *Oceans and Seas ; Plankton/*metabolism ; Rhizaria/*isolation & purification ; Seawater/*chemistry ; Zooplankton/*isolation & purification
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  • 21
    Publication Date: 2016-05-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Chen, Jihong -- Liu, Xiang -- England -- Nature. 2016 May 18;533(7603):321. doi: 10.1038/533321d.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Shanghai Maritime University, China. ; Rutgers University, Piscataway, New Jersey, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/27193671" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Dissent and Disputes ; *Ecosystem ; *Environmental Monitoring ; *Models, Economic ; *Transportation
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  • 22
    Publication Date: 2016-03-11
    Description: The terrestrial biosphere can release or absorb the greenhouse gases, carbon dioxide (CO2), methane (CH4) and nitrous oxide (N2O), and therefore has an important role in regulating atmospheric composition and climate. Anthropogenic activities such as land-use change, agriculture and waste management have altered terrestrial biogenic greenhouse gas fluxes, and the resulting increases in methane and nitrous oxide emissions in particular can contribute to climate change. The terrestrial biogenic fluxes of individual greenhouse gases have been studied extensively, but the net biogenic greenhouse gas balance resulting from anthropogenic activities and its effect on the climate system remains uncertain. Here we use bottom-up (inventory, statistical extrapolation of local flux measurements, and process-based modelling) and top-down (atmospheric inversions) approaches to quantify the global net biogenic greenhouse gas balance between 1981 and 2010 resulting from anthropogenic activities and its effect on the climate system. We find that the cumulative warming capacity of concurrent biogenic methane and nitrous oxide emissions is a factor of about two larger than the cooling effect resulting from the global land carbon dioxide uptake from 2001 to 2010. This results in a net positive cumulative impact of the three greenhouse gases on the planetary energy budget, with a best estimate (in petagrams of CO2 equivalent per year) of 3.9 +/- 3.8 (top down) and 5.4 +/- 4.8 (bottom up) based on the GWP100 metric (global warming potential on a 100-year time horizon). Our findings suggest that a reduction in agricultural methane and nitrous oxide emissions, particularly in Southern Asia, may help mitigate climate change.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Tian, Hanqin -- Lu, Chaoqun -- Ciais, Philippe -- Michalak, Anna M -- Canadell, Josep G -- Saikawa, Eri -- Huntzinger, Deborah N -- Gurney, Kevin R -- Sitch, Stephen -- Zhang, Bowen -- Yang, Jia -- Bousquet, Philippe -- Bruhwiler, Lori -- Chen, Guangsheng -- Dlugokencky, Edward -- Friedlingstein, Pierre -- Melillo, Jerry -- Pan, Shufen -- Poulter, Benjamin -- Prinn, Ronald -- Saunois, Marielle -- Schwalm, Christopher R -- Wofsy, Steven C -- England -- Nature. 2016 Mar 10;531(7593):225-8. doi: 10.1038/nature16946.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉International Center for Climate and Global Change Research, School of Forestry and Wildlife Sciences, Auburn University, Auburn, Alabama 36849, USA. ; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Iowa 50011, USA. ; Laboratoire des Sciences du Climat et de l'Environnement, 91191 Gif sur Yvette, France. ; Department of Global Ecology, Carnegie Institution for Science, Stanford, California 94305, USA. ; Global Carbon Project, CSIRO Oceans and Atmosphere Research, GPO Box 3023, Canberra, Australian Capital Territory 2601, Australia. ; Department of Environmental Sciences, Emory University, Atlanta, Georgia 30322, USA. ; School of Earth Sciences and Environmental Sustainability, Northern Arizona University, Flagstaff, Arizona 86011, USA. ; School of Life Sciences, Arizona State University, Tempe, Arizona 85287, USA. ; College of Life and Environmental Sciences, University of Exeter, Exeter EX4 4RJ, UK. ; NOAA Earth System Research Laboratory, Global Monitoring Division, Boulder, Colorado 80305, USA. ; Environmental Science Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, USA. ; College of Engineering, Mathematics and Physical Sciences, University of Exeter, Exeter EX4 4QF, UK. ; The Ecosystems Center, Marine Biological Laboratory, Woods Hole, Massachusetts 02543, USA. ; Institute of Ecosystems and Department of Ecology, Montana State University, Bozeman, Montana 59717, USA. ; Center for Global Change Science, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA. ; Woods Hole Research Center, Falmouth, Massachusetts 02540, USA. ; Department of Earth and Planetary Science, Harvard University, 29 Oxford Street, Cambridge, Massachusetts 02138, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26961656" target="_blank"〉PubMed〈/a〉
    Keywords: Agriculture/statistics & numerical data ; Asia ; Atmosphere/*chemistry ; Carbon Dioxide/analysis/*metabolism ; *Ecosystem ; Global Warming/prevention & control/*statistics & numerical data ; Greenhouse Effect/prevention & control/*statistics & numerical data ; Human Activities/statistics & numerical data ; Methane/analysis/*metabolism ; Nitrous Oxide/analysis/*metabolism
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  • 23
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    Unknown
    Nature Publishing Group (NPG)
    Publication Date: 2016-05-27
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Mehrabi, Zia -- England -- Nature. 2016 May 25;533(7604):469. doi: 10.1038/533469c.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉University of British Columbia, Canada.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/27225111" target="_blank"〉PubMed〈/a〉
    Keywords: Conservation of Natural Resources/*methods ; *Ecosystem ; *Wilderness
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  • 24
    Publication Date: 2016-02-11
    Description: The biological carbon pump is the process by which CO2 is transformed to organic carbon via photosynthesis, exported through sinking particles, and finally sequestered in the deep ocean. While the intensity of the pump correlates with plankton community composition, the underlying ecosystem structure driving the process remains largely uncharacterized. Here we use environmental and metagenomic data gathered during the Tara Oceans expedition to improve our understanding of carbon export in the oligotrophic ocean. We show that specific plankton communities, from the surface and deep chlorophyll maximum, correlate with carbon export at 150 m and highlight unexpected taxa such as Radiolaria and alveolate parasites, as well as Synechococcus and their phages, as lineages most strongly associated with carbon export in the subtropical, nutrient-depleted, oligotrophic ocean. Additionally, we show that the relative abundance of a few bacterial and viral genes can predict a significant fraction of the variability in carbon export in these regions.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4851848/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4851848/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Guidi, Lionel -- Chaffron, Samuel -- Bittner, Lucie -- Eveillard, Damien -- Larhlimi, Abdelhalim -- Roux, Simon -- Darzi, Youssef -- Audic, Stephane -- Berline, Leo -- Brum, Jennifer R -- Coelho, Luis Pedro -- Espinoza, Julio Cesar Ignacio -- Malviya, Shruti -- Sunagawa, Shinichi -- Dimier, Celine -- Kandels-Lewis, Stefanie -- Picheral, Marc -- Poulain, Julie -- Searson, Sarah -- Tara Oceans Consortium Coordinators -- Stemmann, Lars -- Not, Fabrice -- Hingamp, Pascal -- Speich, Sabrina -- Follows, Mick -- Karp-Boss, Lee -- Boss, Emmanuel -- Ogata, Hiroyuki -- Pesant, Stephane -- Weissenbach, Jean -- Wincker, Patrick -- Acinas, Silvia G -- Bork, Peer -- de Vargas, Colomban -- Iudicone, Daniele -- Sullivan, Matthew B -- Raes, Jeroen -- Karsenti, Eric -- Bowler, Chris -- Gorsky, Gabriel -- England -- Nature. 2016 Apr 28;532(7600):465-70. doi: 10.1038/nature16942. Epub 2016 Feb 10.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Sorbonne Universites, UPMC Universite Paris 06, CNRS, Laboratoire d'oceanographie de Villefranche (LOV), Observatoire Oceanologique, 06230 Villefranche-sur-Mer, France. ; Department of Oceanography, University of Hawaii, Honolulu, Hawaii 96822, USA. ; Department of Microbiology and Immunology, Rega Institute, KU Leuven, Herestraat 49, 3000 Leuven, Belgium. ; Center for the Biology of Disease, VIB, Herestraat 49, 3000 Leuven, Belgium. ; Department of Applied Biological Sciences, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium. ; Sorbonne Universites, UPMC Univ Paris 06, CNRS, Institut de Biologie Paris-Seine (IBPS), Evolution Paris Seine, F-75005, Paris, France. ; Ecole Normale Superieure, PSL Research University, Institut de Biologie de l'Ecole Normale Superieure (IBENS), CNRS UMR 8197, INSERM U1024, 46 rue d'Ulm, F-75005 Paris, France. ; Sorbonne Universites, UPMC Universite Paris 06, CNRS, Laboratoire Adaptation et Diversite en Milieu Marin, Station Biologique de Roscoff, 29680 Roscoff, France. ; LINA UMR 6241, Universite de Nantes, EMN, CNRS, 44322 Nantes, France. ; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona 85721, USA. ; Structural and Computational Biology, European Molecular Biology Laboratory, Meyerhofstr. 1, 69117 Heidelberg, Germany. ; Directors' Research European Molecular Biology Laboratory Meyerhofstr. 1, 69117 Heidelberg, Germany. ; CEA - Institut de Genomique, GENOSCOPE, 2 rue Gaston Cremieux, 91057 Evry, France. ; Aix Marseille Universite, CNRS, IGS, UMR 7256, 13288 Marseille, France. ; Department of Geosciences, Laboratoire de Meteorologie Dynamique (LMD), Ecole Normale Superieure, 24 rue Lhomond, 75231 Paris CEDEX 05, France. ; Dept of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA. ; School of Marine Sciences, University of Maine, Orono, Maine 04469, USA. ; Institute for Chemical Research, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan. ; PANGAEA, Data Publisher for Earth and Environmental Science, University of Bremen, 28359 Bremen, Germany. ; MARUM, Center for Marine Environmental Sciences, University of Bremen, 28359 Bremen, Germany. ; CNRS, UMR 8030, CP 5706 Evry, France. ; Universite d'Evry, UMR 8030, CP 5706 Evry, France. ; Department of Marine Biology and Oceanography, Institute of Marine Sciences (ICM)-CSIC, Pg. Maritim de la Barceloneta 37-49, Barcelona E0800, Spain. ; Max-Delbruck-Centre for Molecular Medicine, 13092 Berlin, Germany. ; Stazione Zoologica Anton Dohrn, Villa Comunale, 80121 Naples, Italy.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26863193" target="_blank"〉PubMed〈/a〉
    Keywords: Aquatic Organisms/genetics/isolation & purification/*metabolism ; Carbon/*metabolism ; Chlorophyll/metabolism ; Dinoflagellida/genetics/isolation & purification/metabolism ; *Ecosystem ; Expeditions ; Genes, Bacterial ; Genes, Viral ; Geography ; Oceans and Seas ; Photosynthesis ; Plankton/genetics/isolation & purification/*metabolism ; Seawater/*chemistry/microbiology/parasitology ; Synechococcus/genetics/isolation & purification/metabolism/virology
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  • 25
    Publication Date: 2016-05-27
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Breed, Martin F -- Lowe, Andrew J -- Mortimer, Peter E -- England -- Nature. 2016 May 25;533(7604):469. doi: 10.1038/533469d.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉University of Adelaide, Australia. ; Kunming Institute of Botany; and World Agroforestry Centre, Kunming, China.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/27225110" target="_blank"〉PubMed〈/a〉
    Keywords: Conservation of Natural Resources/*methods ; *Ecosystem ; *Wilderness
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  • 26
    Publication Date: 2016-03-17
    Description: Plant respiration results in an annual flux of carbon dioxide (CO2) to the atmosphere that is six times as large as that due to the emissions from fossil fuel burning, so changes in either will impact future climate. As plant respiration responds positively to temperature, a warming world may result in additional respiratory CO2 release, and hence further atmospheric warming. Plant respiration can acclimate to altered temperatures, however, weakening the positive feedback of plant respiration to rising global air temperature, but a lack of evidence on long-term (weeks to years) acclimation to climate warming in field settings currently hinders realistic predictions of respiratory release of CO2 under future climatic conditions. Here we demonstrate strong acclimation of leaf respiration to both experimental warming and seasonal temperature variation for juveniles of ten North American tree species growing for several years in forest conditions. Plants grown and measured at 3.4 degrees C above ambient temperature increased leaf respiration by an average of 5% compared to plants grown and measured at ambient temperature; without acclimation, these increases would have been 23%. Thus, acclimation eliminated 80% of the expected increase in leaf respiration of non-acclimated plants. Acclimation of leaf respiration per degree temperature change was similar for experimental warming and seasonal temperature variation. Moreover, the observed increase in leaf respiration per degree increase in temperature was less than half as large as the average reported for previous studies, which were conducted largely over shorter time scales in laboratory settings. If such dampening effects of leaf thermal acclimation occur generally, the increase in respiration rates of terrestrial plants in response to climate warming may be less than predicted, and thus may not raise atmospheric CO2 concentrations as much as anticipated.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Reich, Peter B -- Sendall, Kerrie M -- Stefanski, Artur -- Wei, Xiaorong -- Rich, Roy L -- Montgomery, Rebecca A -- England -- Nature. 2016 Mar 31;531(7596):633-6. doi: 10.1038/nature17142. Epub 2016 Mar 16.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Forest Resources, University of Minnesota, Minnesota 55108, USA. ; Hawkesbury Institute for the Environment, Western Sydney University, Penrith, New South Wales 2753, Australia. ; State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling 712100, China. ; Smithsonian Environmental Research Center, Edgewater, Maryland 20137, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26982730" target="_blank"〉PubMed〈/a〉
    Keywords: *Acclimatization ; Atmosphere ; Carbon Dioxide/metabolism ; Cell Respiration ; Darkness ; *Ecosystem ; Forests ; *Global Warming ; North America ; Photosynthesis ; Plant Leaves/metabolism ; Seasons ; *Temperature ; Time Factors ; Trees/classification/*metabolism
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  • 27
    Publication Date: 2016-04-15
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kotiaho, Janne S -- ten Brink, Ben -- Harris, Jim -- England -- Nature. 2016 Apr 7;532(7597):37. doi: 10.1038/532037c.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉University of Jyvaskyla, Finland. ; PBL-Netherlands Environmental Assessment Agency, The Netherlands. ; Cranfield University, Bedfordshire, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/27078561" target="_blank"〉PubMed〈/a〉
    Keywords: Biodiversity ; Conservation of Natural Resources/*methods ; *Ecosystem ; Human Activities ; Reference Standards ; *Wilderness
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  • 28
    Publication Date: 2016-02-18
    Description: The identification of properties that contribute to the persistence and resilience of ecosystems despite climate change constitutes a research priority of global relevance. Here we present a novel, empirical approach to assess the relative sensitivity of ecosystems to climate variability, one property of resilience that builds on theoretical modelling work recognizing that systems closer to critical thresholds respond more sensitively to external perturbations. We develop a new metric, the vegetation sensitivity index, that identifies areas sensitive to climate variability over the past 14 years. The metric uses time series data derived from the moderate-resolution imaging spectroradiometer (MODIS) enhanced vegetation index, and three climatic variables that drive vegetation productivity (air temperature, water availability and cloud cover). Underlying the analysis is an autoregressive modelling approach used to identify climate drivers of vegetation productivity on monthly timescales, in addition to regions with memory effects and reduced response rates to external forcing. We find ecologically sensitive regions with amplified responses to climate variability in the Arctic tundra, parts of the boreal forest belt, the tropical rainforest, alpine regions worldwide, steppe and prairie regions of central Asia and North and South America, the Caatinga deciduous forest in eastern South America, and eastern areas of Australia. Our study provides a quantitative methodology for assessing the relative response rate of ecosystems--be they natural or with a strong anthropogenic signature--to environmental variability, which is the first step towards addressing why some regions appear to be more sensitive than others, and what impact this has on the resilience of ecosystem service provision and human well-being.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Seddon, Alistair W R -- Macias-Fauria, Marc -- Long, Peter R -- Benz, David -- Willis, Kathy J -- England -- Nature. 2016 Mar 10;531(7593):229-32. doi: 10.1038/nature16986. Epub 2016 Feb 17.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, University of Bergen, Allegaten 41, N-500 Bergen, Norway. ; School of Geography and the Environment, South Parks Road, University of Oxford, Oxford OX1 3QY, UK. ; Long-Term Ecology Laboratory, Biodiversity Institute, Oxford Martin School, Department of Zoology, South Parks Road, University of Oxford, Oxford OX1 3PS, UK. ; Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26886790" target="_blank"〉PubMed〈/a〉
    Keywords: *Acclimatization ; Americas ; Arctic Regions ; Asia ; Australia ; *Climate Change ; *Ecosystem ; Environmental Monitoring ; *Geographic Mapping ; Human Activities ; Models, Theoretical ; *Plant Physiological Phenomena ; Rainforest ; Temperature ; Time Factors ; Trees ; Water/analysis
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  • 29
    Publication Date: 2015-10-16
    Description: It remains unclear whether biodiversity buffers ecosystems against climate extremes, which are becoming increasingly frequent worldwide. Early results suggested that the ecosystem productivity of diverse grassland plant communities was more resistant, changing less during drought, and more resilient, recovering more quickly after drought, than that of depauperate communities. However, subsequent experimental tests produced mixed results. Here we use data from 46 experiments that manipulated grassland plant diversity to test whether biodiversity provides resistance during and resilience after climate events. We show that biodiversity increased ecosystem resistance for a broad range of climate events, including wet or dry, moderate or extreme, and brief or prolonged events. Across all studies and climate events, the productivity of low-diversity communities with one or two species changed by approximately 50% during climate events, whereas that of high-diversity communities with 16-32 species was more resistant, changing by only approximately 25%. By a year after each climate event, ecosystem productivity had often fully recovered, or overshot, normal levels of productivity in both high- and low-diversity communities, leading to no detectable dependence of ecosystem resilience on biodiversity. Our results suggest that biodiversity mainly stabilizes ecosystem productivity, and productivity-dependent ecosystem services, by increasing resistance to climate events. Anthropogenic environmental changes that drive biodiversity loss thus seem likely to decrease ecosystem stability, and restoration of biodiversity to increase it, mainly by changing the resistance of ecosystem productivity to climate events.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Isbell, Forest -- Craven, Dylan -- Connolly, John -- Loreau, Michel -- Schmid, Bernhard -- Beierkuhnlein, Carl -- Bezemer, T Martijn -- Bonin, Catherine -- Bruelheide, Helge -- de Luca, Enrica -- Ebeling, Anne -- Griffin, John N -- Guo, Qinfeng -- Hautier, Yann -- Hector, Andy -- Jentsch, Anke -- Kreyling, Jurgen -- Lanta, Vojtech -- Manning, Pete -- Meyer, Sebastian T -- Mori, Akira S -- Naeem, Shahid -- Niklaus, Pascal A -- Polley, H Wayne -- Reich, Peter B -- Roscher, Christiane -- Seabloom, Eric W -- Smith, Melinda D -- Thakur, Madhav P -- Tilman, David -- Tracy, Benjamin F -- van der Putten, Wim H -- van Ruijven, Jasper -- Weigelt, Alexandra -- Weisser, Wolfgang W -- Wilsey, Brian -- Eisenhauer, Nico -- England -- Nature. 2015 Oct 22;526(7574):574-7. doi: 10.1038/nature15374. Epub 2015 Oct 14.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Ecology, Evolution and Behavior, University of Minnesota Twin Cities, Saint Paul, Minnesota 55108, USA. ; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany. ; Institute of Biology, Leipzig University, Johannisallee 21, 04103 Leipzig, Germany. ; Ecological and Environmental Modelling Group, School of Mathematics and Statistics, University College Dublin, Dublin 4, Ireland. ; Centre for Biodiversity Theory and Modelling, Experimental Ecology Station, Centre National de la Recherche Scientifique, Moulis 09200, France. ; Institute of Evolutionary Biology and Environmental Studies, University of Zurich, 8057 Zurich, Switzerland. ; Department of Biogeography, BayCEER, University of Bayreuth, 95440 Bayreuth, Germany. ; Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), PO Box 50, 6700 AB Wageningen, The Netherlands. ; Department of Agronomy, Iowa State University, Ames, Iowa 50011, USA. ; Institute of Biology, Martin Luther University Halle-Wittenberg, 06108 Halle, Germany. ; Institute of Ecology, Friedrich Schiller University Jena, Dornburger Strasse 159, 07743 Jena, Germany. ; Department of Biosciences, Swansea University, Singleton Park, Swansea SA28PP, UK. ; USDA FS, Eastern Forest Environmental Threat Assessment Center, RTP, North Carolina 27709, USA. ; Ecology and Biodiversity Group, Department of Biology, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. ; Department of Plant Sciences, University of Oxford, Oxford OX1 3RB, UK. ; Disturbance Ecology, BayCEER, University of Bayreuth, 95440 Bayreuth, Germany. ; Institute of Botany and Landscape Ecology, Ernst-Moritz-Arndt University Greifswald, D-17487 Greifswald, Germany. ; Department of Botany, Faculty of Science, University of South Bohemia, Branisovska 31, 37005 Ceske Budejovice, Czech Republic. ; Institute for Plant Sciences, University of Bern, CH-3013 Bern, Switzerland. ; Department of Ecology and Ecosystem Management, School of Life Sciences Weihenstephan, Technische Universitat Munchen, 85354 Freising, Germany. ; Graduate School of Environment and Information Sciences, Yokohama National University, 79-7 Tokiwadai, Hodogaya, Yokohama, Kanagawa, 240-8501, Japan. ; Department of Ecology, Evolution, and Environmental Biology, Columbia University, New York, New York 10027, USA. ; US Department of Agriculture Agricultural Research Service, Grassland, Soil and Water Research Laboratory, Temple, Texas 76502, USA. ; Department of Forest Resources, University of Minnesota Twin Cities, Saint Paul, Minnesota 55108 USA. ; Hawkesbury Institute for the Environment, University of Western Sydney, Penrith, New South Wales 2753, Australia. ; UFZ Helmholtz Centre for Environmental Research, Community Ecology, 06120 Halle, Germany. ; Graduate Degree Program in Ecology and Department of Biology, Colorado State University, Fort Collins, Colorado 80523, USA. ; Bren School of Environmental Science and Management, University of California, Santa Barbara, California 93106 USA. ; Crop and Soil Environmental Sciences, Smyth Hall 0404, Virginia Tech, Blacksburg, Virginia 24061, USA. ; Laboratory of Nematology, Wageningen University and Research Centre, PO Box 8123, 6700 ES Wageningen, The Netherlands. ; Nature Conservation and Plant Ecology Group, Wageningen University, PO Box 47, 6700 AA Wageningen, The Netherlands. ; Department of Ecology, Evolution and Organismal Biology, Iowa State University, Ames, Iowa 50011, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26466564" target="_blank"〉PubMed〈/a〉
    Keywords: *Biodiversity ; *Climate ; Climate Change/statistics & numerical data ; Conservation of Natural Resources ; Disasters/statistics & numerical data ; Droughts ; *Ecosystem ; Grassland ; Human Activities ; *Plant Physiological Phenomena
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  • 30
    Publication Date: 2016-02-06
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Ji, Weihong -- Aryal, Achyut -- Su, Junhu -- England -- Nature. 2016 Feb 4;530(7588):33. doi: 10.1038/530033c.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Massey University, Auckland, New Zealand; and Gansu Agricultural University, China. ; Gansu Agricultural University, China.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26842048" target="_blank"〉PubMed〈/a〉
    Keywords: Agriculture/instrumentation/legislation & jurisprudence ; Animal Migration ; Animals ; Animals, Wild/genetics/*physiology ; Conservation of Natural Resources/*legislation & jurisprudence/*methods ; *Ecosystem ; Environmental Policy/*legislation & jurisprudence ; Motor Vehicles ; Railroads ; Tibet
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  • 31
    Publication Date: 2016-03-17
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Thingstad, T Frede -- Bratbak, Gunnar -- England -- Nature. 2016 Mar 24;531(7595):454-5. doi: 10.1038/nature17303. Epub 2016 Mar 16.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, University of Bergen, 5020 Bergen, Norway.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26982732" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Anthozoa/*virology ; *Ecosystem ; *Host-Pathogen Interactions ; Viruses/*pathogenicity
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  • 32
    Publication Date: 2016-03-17
    Description: Microbial viruses can control host abundances via density-dependent lytic predator-prey dynamics. Less clear is how temperate viruses, which coexist and replicate with their host, influence microbial communities. Here we show that virus-like particles are relatively less abundant at high host densities. This suggests suppressed lysis where established models predict lytic dynamics are favoured. Meta-analysis of published viral and microbial densities showed that this trend was widespread in diverse ecosystems ranging from soil to freshwater to human lungs. Experimental manipulations showed viral densities more consistent with temperate than lytic life cycles at increasing microbial abundance. An analysis of 24 coral reef viromes showed a relative increase in the abundance of hallmark genes encoded by temperate viruses with increased microbial abundance. Based on these four lines of evidence, we propose the Piggyback-the-Winner model wherein temperate dynamics become increasingly important in ecosystems with high microbial densities; thus 'more microbes, fewer viruses'.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Knowles, B -- Silveira, C B -- Bailey, B A -- Barott, K -- Cantu, V A -- Cobian-Guemes, A G -- Coutinho, F H -- Dinsdale, E A -- Felts, B -- Furby, K A -- George, E E -- Green, K T -- Gregoracci, G B -- Haas, A F -- Haggerty, J M -- Hester, E R -- Hisakawa, N -- Kelly, L W -- Lim, Y W -- Little, M -- Luque, A -- McDole-Somera, T -- McNair, K -- de Oliveira, L S -- Quistad, S D -- Robinett, N L -- Sala, E -- Salamon, P -- Sanchez, S E -- Sandin, S -- Silva, G G Z -- Smith, J -- Sullivan, C -- Thompson, C -- Vermeij, M J A -- Youle, M -- Young, C -- Zgliczynski, B -- Brainard, R -- Edwards, R A -- Nulton, J -- Thompson, F -- Rohwer, F -- England -- Nature. 2016 Mar 24;531(7595):466-70. doi: 10.1038/nature17193. Epub 2016 Mar 16.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Biology, San Diego State University, 5500 Campanile Drive, San Diego, California 92182, USA. ; Biology Institute, Rio de Janeiro Federal University, Av. Carlos Chagas Filho 373, Rio de Janeiro, Rio de Janeiro 21941-599, Brazil. ; Department of Mathematics and Statistics, San Diego State University, 5500 Campanile Drive, San Diego, California 92182, USA. ; Hawaii Institute of Marine Biology, University of Hawaii at Manoa, 46-007 Lilipuna Road, Kaneohe, Hawaii 96744, USA. ; Computational Science Research Center, San Diego State University, 5500 Campanile Drive, San Diego, California 92182, USA. ; Rainbow Rock, Ocean View, Hawaii 96737, USA. ; Radboud University Medical Centre, Radboud Institute for Molecular Life Sciences, Centre for Molecular and Biomolecular Informatics, 6525HP Nijmegen, The Netherlands. ; Viral Information Institute, San Diego State University, 5500 Campanile Drive, San Diego, California 92182, USA. ; Scripps Institution of Oceanography, 8622 Kennel Way, La Jolla, California 92037, USA. ; Department of Biology, University of California San Diego, 9500 Gilman Drive, La Jolla, California 92093, USA. ; Marine Sciences Department, Sao Paulo Federal University - Baixada Santista, Av. Alm. Saldanha da Gama, 89, Santos, Sao Paulo 11030-400, Brazil. ; National Geographic Society, 1145 17th St NW, Washington D.C. 20036, USA. ; CARMABI Foundation, Piscaderabaai z/n, Willemstad, Curacao, Netherlands Antilles. ; Aquatic Microbiology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, 1098XH Amsterdam, The Netherlands.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26982729" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Anthozoa/physiology/*virology ; Bacteriophages/pathogenicity/physiology ; Coral Reefs ; *Ecosystem ; Genes, Viral/genetics ; *Host-Pathogen Interactions ; Lysogeny ; Models, Biological ; Virulence/genetics ; Viruses/genetics/isolation & purification/*pathogenicity
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  • 33
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    Nature Publishing Group (NPG)
    Publication Date: 2016-04-30
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Rodriguez, Barbra -- England -- Nature. 2016 Apr 21;532(7599):403-4.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/27127819" target="_blank"〉PubMed〈/a〉
    Keywords: Adaptation, Physiological ; Animal Migration ; Animals ; Biodiversity ; Climate Change/economics/*statistics & numerical data ; Ecology/economics/manpower/*methods/*trends ; *Ecosystem ; Plants ; Research/economics/manpower/*trends ; *Research Design ; Research Personnel ; *Uncertainty ; Ursidae ; *Weather
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  • 34
    Publication Date: 2016-05-07
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Davis, Andrew R -- Broad, Allison -- England -- Nature. 2016 May 5;533(7601):36. doi: 10.1038/533036a.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉University of Wollongong, Australia.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/27147022" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Aquatic Organisms ; Biodiversity ; Conservation of Natural Resources/*methods/trends ; *Ecosystem ; Ships/*methods
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  • 35
    Publication Date: 2016-04-01
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Doherty, Tim S -- Maron, Martine -- England -- Nature. 2016 Mar 31;531(7596):580. doi: 10.1038/531580b.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Deakin University, Victoria, Australia. ; The University of Queensland, Brisbane, Australia.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/27029269" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Australia ; *Ecosystem ; Endangered Species ; *Financing, Government ; *Fires/economics/statistics & numerical data ; Forests ; *Global Warming/economics/statistics & numerical data ; Leadership ; Politics ; Research/*economics/trends
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  • 36
    Publication Date: 2016-02-19
    Description: Resilience, a system's ability to adjust its activity to retain its basic functionality when errors, failures and environmental changes occur, is a defining property of many complex systems. Despite widespread consequences for human health, the economy and the environment, events leading to loss of resilience--from cascading failures in technological systems to mass extinctions in ecological networks--are rarely predictable and are often irreversible. These limitations are rooted in a theoretical gap: the current analytical framework of resilience is designed to treat low-dimensional models with a few interacting components, and is unsuitable for multi-dimensional systems consisting of a large number of components that interact through a complex network. Here we bridge this theoretical gap by developing a set of analytical tools with which to identify the natural control and state parameters of a multi-dimensional complex system, helping us derive effective one-dimensional dynamics that accurately predict the system's resilience. The proposed analytical framework allows us systematically to separate the roles of the system's dynamics and topology, collapsing the behaviour of different networks onto a single universal resilience function. The analytical results unveil the network characteristics that can enhance or diminish resilience, offering ways to prevent the collapse of ecological, biological or economic systems, and guiding the design of technological systems resilient to both internal failures and environmental changes.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gao, Jianxi -- Barzel, Baruch -- Barabasi, Albert-Laszlo -- England -- Nature. 2016 Feb 18;530(7590):307-12. doi: 10.1038/nature16948.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Center for Complex Network Research, Department of Physics, Northeastern University, Boston, Massachusetts 02115, USA. ; Department of Mathematics, Bar-Ilan University, Ramat-Gan 52900, Israel. ; Center for Cancer Systems Biology, Dana-Farber Cancer Institute, Harvard University, Boston, Massachusetts 02215, USA. ; Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts 02115, USA. ; Center for Network Science, Central European University, Budapest 1051, Hungary.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26887493" target="_blank"〉PubMed〈/a〉
    Keywords: Adaptation, Physiological ; *Ecosystem ; Gene Expression Regulation ; Gene Regulatory Networks/*genetics ; *Models, Biological
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  • 37
    Publication Date: 2015-12-18
    Description: Understanding how ecological communities are organized and how they change through time is critical to predicting the effects of climate change. Recent work documenting the co-occurrence structure of modern communities found that most significant species pairs co-occur less frequently than would be expected by chance. However, little is known about how co-occurrence structure changes through time. Here we evaluate changes in plant and animal community organization over geological time by quantifying the co-occurrence structure of 359,896 unique taxon pairs in 80 assemblages spanning the past 300 million years. Co-occurrences of most taxon pairs were statistically random, but a significant fraction were spatially aggregated or segregated. Aggregated pairs dominated from the Carboniferous period (307 million years ago) to the early Holocene epoch (11,700 years before present), when there was a pronounced shift to more segregated pairs, a trend that continues in modern assemblages. The shift began during the Holocene and coincided with increasing human population size and the spread of agriculture in North America. Before the shift, an average of 64% of significant pairs were aggregated; after the shift, the average dropped to 37%. The organization of modern and late Holocene plant and animal assemblages differs fundamentally from that of assemblages over the past 300 million years that predate the large-scale impacts of humans. Our results suggest that the rules governing the assembly of communities have recently been changed by human activity.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lyons, S Kathleen -- Amatangelo, Kathryn L -- Behrensmeyer, Anna K -- Bercovici, Antoine -- Blois, Jessica L -- Davis, Matt -- DiMichele, William A -- Du, Andrew -- Eronen, Jussi T -- Faith, J Tyler -- Graves, Gary R -- Jud, Nathan -- Labandeira, Conrad -- Looy, Cindy V -- McGill, Brian -- Miller, Joshua H -- Patterson, David -- Pineda-Munoz, Silvia -- Potts, Richard -- Riddle, Brett -- Terry, Rebecca -- Toth, Aniko -- Ulrich, Werner -- Villasenor, Amelia -- Wing, Scott -- Anderson, Heidi -- Anderson, John -- Waller, Donald -- Gotelli, Nicholas J -- England -- Nature. 2016 Jan 7;529(7584):80-3. doi: 10.1038/nature16447. Epub 2015 Dec 16.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Paleobiology, National Museum of Natural History, Smithsonian Institution, Washington DC 20013, USA. ; Department of Environmental Science and Biology, The College at Brockport - SUNY, Brockport, New York 14420, USA. ; School of Natural Sciences, University of California, Merced, 5200 North Lake Road, Merced, California 95343, USA. ; Department of Geology and Geophysics, Yale University, New Haven, Connecticut 06520, USA. ; Hominid Paleobiology Doctoral Program, Center for the Advanced Study of Hominid Paleobiology, Department of Anthropology, George Washington University, Washington DC 20052, USA. ; Department of Geosciences and Geography, University of Helsinki, PO Box 64, 00014 University of Helsinki, Finland. ; School of Social Science, The University of Queensland, Brisbane, Queensland 4072, Australia. ; Department of Vertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington DC 20013, USA. ; Center for Macroecology, Evolution and Climate, University of Copenhagen, Copenhagen 2100, Denmark. ; Biological Sciences Graduate Program, University of Maryland, College Park, Maryland 20742, USA. ; Florida Museum of Natural History, University of Florida, Gainsville, Florida 32611, USA. ; Department of Entomology, University of Maryland College Park, College Park, Maryland 20742, USA. ; Key Lab of Insect Evolution and Environmental Changes, Capital Normal University, Beijing 100048, China. ; Department of Integrative Biology and Museum of Paleontology, University of California Berkeley, Berkeley, California 94720, USA. ; School Biology and Ecology &Sustainability Solutions Initiative, University of Maine, Orono, Maine 04469, USA. ; Department of Geology, University of Cincinnati, Cincinnati, Ohio 45221, USA. ; Department of Biological Sciences, Macquarie University, Sydney, New South Wales 2109, Australia. ; Department of Anthropology, Human Origins Program, National Museum of Natural History, Smithsonian Institution, Washington DC 20013, USA. ; School of Life Sciences, University of Nevada-Las Vegas, Las Vegas, Nevada 89154, USA. ; Department of Integrative Biology, Oregon State University, Corvallis, Oregon 97331, USA. ; Chair of Ecology and Biogeography, Nicolaus Copernicus University, Lwowska 1, 87-100 Torun, Poland. ; Evolutionary Studies Institute, University of the Witwatersrand, Jorissen Street, Braamfontein, Johannesburg 2001, South Africa. ; Department of Botany, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA. ; Department of Biology, University of Vermont, Burlington, Vermont 05405, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26675730" target="_blank"〉PubMed〈/a〉
    Keywords: Agriculture/*history ; Animals ; *Ecosystem ; History, Ancient ; Human Activities/*history ; Humans ; North America ; *Plant Physiological Phenomena ; Population Dynamics ; Time Factors
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  • 38
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    Nature Publishing Group (NPG)
    Publication Date: 2015-05-15
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Lunshof, Jeantine -- England -- Nature. 2015 May 14;521(7551):127. doi: 10.1038/521127a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25971471" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Animals, Laboratory/genetics ; Animals, Wild/*genetics ; Bioengineering/ethics/legislation & jurisprudence ; Biohazard Release/legislation & jurisprudence/*prevention & control ; CRISPR-Cas Systems/*genetics ; Directed Molecular Evolution ; Drosophila melanogaster/genetics/physiology ; *Ecosystem ; Embryo Research/ethics/legislation & jurisprudence ; Genetic Engineering/ethics/*legislation & jurisprudence ; Genome, Insect/genetics ; Germ-Line Mutation/genetics ; Humans
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  • 39
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    Nature Publishing Group (NPG)
    Publication Date: 2015-08-28
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cressey, Daniel -- England -- Nature. 2015 Aug 27;524(7566):399-400. doi: 10.1038/524399a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26310747" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Cities ; Congresses as Topic ; Conservation of Natural Resources/trends ; Disasters/prevention & control/statistics & numerical data ; Ecology/*trends ; *Ecosystem ; *Human Activities ; Humans ; New York City ; Rivers/chemistry/microbiology ; Urbanization/trends
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  • 40
    Publication Date: 2015-01-17
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Cressey, Daniel -- England -- Nature. 2015 Jan 15;517(7534):255-6. doi: 10.1038/517255a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25592514" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; DNA Barcoding, Taxonomic ; Ecology/*methods ; *Ecosystem ; Humans ; Laboratories ; Models, Biological ; Pacific Ocean ; Polynesia ; *Research ; *Tropical Climate ; *User-Computer Interface
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  • 41
    Publication Date: 2015-08-28
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Gewin, Virginia -- England -- Nature. 2015 Aug 27;524(7566):396. doi: 10.1038/nature.2015.18218.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26310744" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Conservation of Natural Resources/*methods ; Decision Making ; *Ecosystem ; Fisheries/legislation & jurisprudence/*methods ; Fishes/*physiology ; *Hot Temperature ; Pacific Ocean ; Population Density ; *Seawater/analysis
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  • 42
    Publication Date: 2015-05-21
    Description: A major challenge in theoretical ecology is understanding how natural microbial communities support species diversity, and in particular how antibiotic-producing, -sensitive and -resistant species coexist. While cyclic 'rock-paper-scissors' interactions can stabilize communities in spatial environments, coexistence in unstructured environments remains unexplained. Here, using simulations and analytical models, we show that the opposing actions of antibiotic production and degradation enable coexistence even in well-mixed environments. Coexistence depends on three-way interactions in which an antibiotic-degrading species attenuates the inhibitory interactions between two other species. These interactions enable coexistence that is robust to substantial differences in inherent species growth rates and to invasion by 'cheating' species that cease to produce or degrade antibiotics. At least two antibiotics are required for stability, with greater numbers of antibiotics enabling more complex communities and diverse dynamic behaviours ranging from stable fixed points to limit cycles and chaos. Together, these results show how multi-species antibiotic interactions can generate ecological stability in both spatially structured and mixed microbial communities, suggesting strategies for engineering synthetic ecosystems and highlighting the importance of toxin production and degradation for microbial biodiversity.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4551410/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4551410/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kelsic, Eric D -- Zhao, Jeffrey -- Vetsigian, Kalin -- Kishony, Roy -- R01 GM081617/GM/NIGMS NIH HHS/ -- R01GM081617/GM/NIGMS NIH HHS/ -- England -- Nature. 2015 May 28;521(7553):516-9.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25992546" target="_blank"〉PubMed〈/a〉
    Keywords: Anti-Bacterial Agents/*biosynthesis/*metabolism ; Biodiversity ; *Ecosystem ; *Models, Biological ; *Soil Microbiology
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  • 43
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    Nature Publishing Group (NPG)
    Publication Date: 2015-05-01
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉England -- Nature. 2015 Apr 30;520(7549):585-6. doi: 10.1038/520585b.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25925436" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Aquatic Organisms ; *Conservation of Natural Resources ; *Ecology ; *Ecosystem ; Great Britain ; *Oceans and Seas
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 44
    Publication Date: 2015-05-15
    Description: Riverine export of particulate organic carbon (POC) to the ocean affects the atmospheric carbon inventory over a broad range of timescales. On geological timescales, the balance between sequestration of POC from the terrestrial biosphere and oxidation of rock-derived (petrogenic) organic carbon sets the magnitude of the atmospheric carbon and oxygen reservoirs. Over shorter timescales, variations in the rate of exchange between carbon reservoirs, such as soils and marine sediments, also modulate atmospheric carbon dioxide levels. The respective fluxes of biospheric and petrogenic organic carbon are poorly constrained, however, and mechanisms controlling POC export have remained elusive, limiting our ability to predict POC fluxes quantitatively as a result of climatic or tectonic changes. Here we estimate biospheric and petrogenic POC fluxes for a suite of river systems representative of the natural variability in catchment properties. We show that export yields of both biospheric and petrogenic POC are positively related to the yield of suspended sediment, revealing that POC export is mostly controlled by physical erosion. Using a global compilation of gauged suspended sediment flux, we derive separate estimates of global biospheric and petrogenic POC fluxes of 157(+74)(-50) and 43(+61)(-25) megatonnes of carbon per year, respectively. We find that biospheric POC export is primarily controlled by the capacity of rivers to mobilize and transport POC, and is largely insensitive to the magnitude of terrestrial primary production. Globally, physical erosion rates affect the rate of biospheric POC burial in marine sediments more strongly than carbon sequestration through silicate weathering. We conclude that burial of biospheric POC in marine sediments becomes the dominant long-term atmospheric carbon dioxide sink under enhanced physical erosion.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Galy, Valier -- Peucker-Ehrenbrink, Bernhard -- Eglinton, Timothy -- England -- Nature. 2015 May 14;521(7551):204-7. doi: 10.1038/nature14400.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Woods Hole Oceanographic Institution, Department of Marine Chemistry and Geochemistry, 360 Woods Hole Road, Woods Hole, Massachusetts 02543, USA. ; 1] Woods Hole Oceanographic Institution, Department of Marine Chemistry and Geochemistry, 360 Woods Hole Road, Woods Hole, Massachusetts 02543, USA [2] Geological Institute, Department of Earth Sciences, Sonneggstrasse 5, Eidgenossische Technische Hochschule, 8092 Zurich, Switzerland.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/25971513" target="_blank"〉PubMed〈/a〉
    Keywords: Atmosphere/chemistry ; Carbon/*analysis ; *Carbon Cycle ; Carbon Dioxide/analysis ; Carbon Sequestration ; *Ecosystem ; Geologic Sediments/*chemistry ; Oxygen/analysis ; Particulate Matter/analysis ; Rivers/*chemistry ; Soil/*chemistry
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 45
    Publication Date: 2015-12-18
    Description: The fossil record provides striking case studies of biodiversity loss and global ecosystem upheaval. Because of this, many studies have sought to assess the magnitude of the current biodiversity crisis relative to past crises-a task greatly complicated by the need to extrapolate extinction rates. Here we challenge this approach by showing that the rarity of previously abundant taxa may be more important than extinction in the cascade of events leading to global changes in the biosphere. Mass rarity may provide the most robust measure of our current biodiversity crisis relative to those past, and new insights into the dynamics of mass extinction.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Hull, Pincelli M -- Darroch, Simon A F -- Erwin, Douglas H -- England -- Nature. 2015 Dec 17;528(7582):345-51. doi: 10.1038/nature16160.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Geology and Geophysics, Yale University, New Haven, Connecticut 06520-8109, USA. ; Department of Paleobiology, National Museum of Natural History, Washington, DC 20013-7012, USA. ; Department of Earth and Environmental Sciences, Vanderbilt University, Nashville, Tennessee 37235-1805, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26672552" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Biodiversity ; Biological Evolution ; Classification ; Conservation of Natural Resources ; Ecology/methods ; *Ecosystem ; *Extinction, Biological ; Fossils ; Population Density
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 46
    Publication Date: 2015-09-04
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉McCrary, Jeffrey K -- England -- Nature. 2015 Sep 3;525(7567):33. doi: 10.1038/525033b.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Nicaraguan Foundation for Integral Community Development, Managua, Nicaragua.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26333461" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Dissent and Disputes ; *Ecosystem ; *Environmental Monitoring ; *Models, Economic ; *Transportation
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 47
    Publication Date: 2015-09-17
    Description: Understanding how species respond to climate change is critical for forecasting the future dynamics and distribution of pests, diseases and biological diversity. Although ecologists have long acknowledged species' direct physiological and demographic responses to climate, more recent work suggests that these direct responses can be overwhelmed by indirect effects mediated via other interacting community members. Theory suggests that some of the most dramatic impacts of community change will probably arise through the assembly of novel species combinations after asynchronous migrations with climate. Empirical tests of this prediction are rare, as existing work focuses on the effects of changing interactions between competitors that co-occur today. To explore how species' responses to climate warming depend on how their competitors migrate to track climate, we transplanted alpine plant species and intact plant communities along a climate gradient in the Swiss Alps. Here we show that when alpine plants were transplanted to warmer climates to simulate a migration failure, their performance was strongly reduced by novel competitors that could migrate upwards from lower elevation; these effects generally exceeded the impact of warming on competition with current competitors. In contrast, when we grew the focal plants under their current climate to simulate climate tracking, a shift in the competitive environment to novel high-elevation competitors had little to no effect. This asymmetry in the importance of changing competitor identity at the leading versus trailing range edges is best explained by the degree of functional similarity between current and novel competitors. We conclude that accounting for novel competitive interactions may be essential to predict species' responses to climate change accurately.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Alexander, Jake M -- Diez, Jeffrey M -- Levine, Jonathan M -- England -- Nature. 2015 Sep 24;525(7570):515-8. doi: 10.1038/nature14952. Epub 2015 Sep 16.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Integrative Biology, ETH Zurich, Universitatstrasse 16, 8092 Zurich, Switzerland. ; Department of Botany and Plant Sciences, University of California Riverside, 900 University Avenue, Riverside, California 92521, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26374998" target="_blank"〉PubMed〈/a〉
    Keywords: *Altitude ; *Ecosystem ; *Global Warming ; *Plant Physiological Phenomena ; Switzerland ; *Temperature
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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