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  • 1
    Publication Date: 2022-12-09
    Description: Author Posting. © American Meteorological Society, 2022. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 52(7), (2022): 1333-1350, https://doi.org/10.1175/jpo-d-21-0298.1.
    Description: Idealized numerical simulations were conducted to investigate the influence of channel curvature on estuarine stratification and mixing. Stratification is decreased and tidal energy dissipation is increased in sinuous estuaries compared to straight channel estuaries. We applied a vertical salinity variance budget to quantify the influence of straining and mixing on stratification. Secondary circulation due to the channel curvature is found to affect stratification in sinuous channels through both lateral straining and enhanced vertical mixing. Alternating negative and positive lateral straining occur in meanders upstream and downstream of the bend apex, respectively, corresponding to the normal and reversed secondary circulation with curvature. The vertical mixing is locally enhanced in curved channels with the maximum mixing located upstream of the bend apex. Bend-scale bottom salinity fronts are generated near the inner bank upstream of the bend apex as a result of interaction between the secondary flow and stratification. Shear mixing at bottom fronts, instead of overturning mixing by the secondary circulation, provides the dominant mechanism for destruction of stratification. Channel curvature can also lead to increased drag, and using a Simpson number with this increased drag coefficient can relate the decrease in stratification with curvature to the broader estuarine parameter space.
    Description: The research leading to these results was funded by NSF Awards OCE-1634481 and OCE-2123002.
    Description: 2022-12-09
    Keywords: Estuaries ; Mixing ; Secondary circulation ; Fronts ; Tides ; Numerical analysis/modeling
    Repository Name: Woods Hole Open Access Server
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  • 2
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 50(2), (2020): 415-437, doi:10.1175/JPO-D-19-0019.1.
    Description: Results are presented from two dye release experiments conducted in the seasonal thermocline of the Sargasso Sea, one in a region of low horizontal strain rate (~10−6 s−1), the second in a region of intermediate horizontal strain rate (~10−5 s−1). Both experiments lasted ~6 days, covering spatial scales of 1–10 and 1–50 km for the low and intermediate strain rate regimes, respectively. Diapycnal diffusivities estimated from the two experiments were κz = (2–5) × 10−6 m2 s−1, while isopycnal diffusivities were κH = (0.2–3) m2 s−1, with the range in κH being less a reflection of site-to-site variability, and more due to uncertainties in the background strain rate acting on the patch combined with uncertain time dependence. The Site I (low strain) experiment exhibited minimal stretching, elongating to approximately 10 km over 6 days while maintaining a width of ~5 km, and with a notable vertical tilt in the meridional direction. By contrast, the Site II (intermediate strain) experiment exhibited significant stretching, elongating to more than 50 km in length and advecting more than 150 km while still maintaining a width of order 3–5 km. Early surveys from both experiments showed patchy distributions indicative of small-scale stirring at scales of order a few hundred meters. Later surveys show relatively smooth, coherent distributions with only occasional patchiness, suggestive of a diffusive rather than stirring process at the scales of the now larger patches. Together the two experiments provide important clues as to the rates and underlying processes driving diapycnal and isopycnal mixing at these scales.
    Description: Results are presented from two dye release experiments conducted in the seasonal thermocline of the Sargasso Sea, one in a region of low horizontal strain rate (~10−6 s−1), the second in a region of intermediate horizontal strain rate (~10−5 s−1). Both experiments lasted ~6 days, covering spatial scales of 1–10 and 1–50 km for the low and intermediate strain rate regimes, respectively. Diapycnal diffusivities estimated from the two experiments were κz = (2–5) × 10−6 m2 s−1, while isopycnal diffusivities were κH = (0.2–3) m2 s−1, with the range in κH being less a reflection of site-to-site variability, and more due to uncertainties in the background strain rate acting on the patch combined with uncertain time dependence. The Site I (low strain) experiment exhibited minimal stretching, elongating to approximately 10 km over 6 days while maintaining a width of ~5 km, and with a notable vertical tilt in the meridional direction. By contrast, the Site II (intermediate strain) experiment exhibited significant stretching, elongating to more than 50 km in length and advecting more than 150 km while still maintaining a width of order 3–5 km. Early surveys from both experiments showed patchy distributions indicative of small-scale stirring at scales of order a few hundred meters. Later surveys show relatively smooth, coherent distributions with only occasional patchiness, suggestive of a diffusive rather than stirring process at the scales of the now larger patches. Together the two experiments provide important clues as to the rates and underlying processes driving diapycnal and isopycnal mixing at these scales.
    Description: 2020-08-06
    Keywords: Ocean ; Atlantic Ocean ; Diapycnal mixing ; Diffusion ; Dispersion ; Mixing
    Repository Name: Woods Hole Open Access Server
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  • 3
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of the Atmospheric and Oceanic Technology 37(5), (2020): 789-806, doi:10.1175/JTECH-D-18-0244.1.
    Description: Realistic ocean state prediction and its validation rely on the availability of high quality in situ observations. To detect data errors, adequate quality check procedures must be designed. This paper presents procedures that take advantage of the ever-growing observation databases that provide climatological knowledge of the ocean variability in the neighborhood of an observation location. Local validity intervals are used to estimate binarily whether the observed values are considered as good or erroneous. Whereas a classical approach estimates validity bounds from first- and second-order moments of the climatological parameter distribution, that is, mean and variance, this work proposes to infer them directly from minimum and maximum observed values. Such an approach avoids any assumption of the parameter distribution such as unimodality, symmetry around the mean, peakedness, or homogeneous distribution tail height relative to distribution peak. To reach adequate statistical robustness, an extensive manual quality control of the reference dataset is critical. Once the data have been quality checked, the local minima and maxima reference fields are derived and the method is compared with the classical mean/variance-based approach. Performance is assessed in terms of statistics of good and bad detections. It is shown that the present size of the reference datasets allows the parameter estimates to reach a satisfactory robustness level to always make the method more efficient than the classical one. As expected, insufficient robustness persists in areas with an especially low number of samples and high variability.
    Description: This study has been conducted using EU Copernicus Marine Service Information and was supported by the European Union within the EU Copernicus Marine Service In Situ phase-I and phase-II contracts led by Ifremer. The publication was also supported by SOERE CTDO2 in France. The Argo data were collected and made freely available by the International Argo Program and the national programs that contribute to it (see http://www.argo.ucsd.edu, http://argo.jcommops.org). The Argo Program is part of the Global Ocean Observing System (http://doi.org/10.17882/42182). The marine mammal data were collected and made freely available by the International MEOP Consortium and the national programs that contribute to it (see http://www.meop.net; https://doi.org/10.17882/45461). Aleix Gelabert and Dídac Costa were the skippers of the OPOO, sponsored by the Intergovernmental Oceanographic Commission (UNESCO) and Pharmaton. The BWR is a periodic oceanic race organized by the Fundació Navegació Oceànica de Barcelona (FNOB). Reviewer D. Briand provided some useful comments on the final version of the draft paper before submission.
    Description: 2020-11-04
    Keywords: Ocean ; Climatology ; Salinity ; Temperature ; Data quality control ; Oceanic variability
    Repository Name: Woods Hole Open Access Server
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  • 4
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 50(5), (2020): 1245-1263, doi:10.1175/JPO-D-19-0213.1.
    Description: We use laboratory experiments and theoretical modeling to investigate the surface expression of a subglacial discharge plume, as occurs at many fjords around Greenland. The experiments consider a fountain that is released vertically into a homogeneous fluid, adjacent either to a vertical or a sloping wall, that then spreads horizontally at the free surface before sinking back to the bottom. We present a model that separates the fountain into two separate regions: a vertical fountain and a horizontal, negatively buoyant jet. The model is compared to laboratory experiments that are conducted over a range of volume fluxes, density differences, and ambient fluid depths. It is shown that the nondimensionalized length, width, and aspect ratio of the surface expression are dependent on the Froude number, calculated at the start of the negatively buoyant jet. The model is applied to observations of the surface expression from a Greenland subglacial discharge plume. In the case where the discharge plume reaches the surface with negative buoyancy the model can be used to estimate the discharge properties at the base of the glacier.
    Description: We gratefully acknowledge technical assistance from Anders Jensen and thank anonymous reviewers for improving the clarity of the manuscript. CM thanks the Weston Howard Jr. Scholarship for funding. Support to CC was given by NSF project OCE-1434041 and OCE-1658079.
    Description: 2020-10-27
    Keywords: Ocean ; Glaciers ; Ice sheets ; Convection ; Laboratory/physical models
    Repository Name: Woods Hole Open Access Server
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  • 5
    Publication Date: 2022-05-27
    Description: Author Posting. © American Meteorological Society, 2021. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 51(1), (2021): 19-35, https://doi.org/10.1175/JPO-D-19-0233.1.
    Description: In the Beaufort Sea in September of 2015, concurrent mooring and microstructure observations were used to assess dissipation rates in the vicinity of 72°35′N, 145°1′W. Microstructure measurements from a free-falling profiler survey showed very low [O(10−10) W kg−1] turbulent kinetic energy dissipation rates ε. A finescale parameterization based on both shear and strain measurements was applied to estimate the ratio of shear to strain Rω and ε at the mooring location, and a strain-based parameterization was applied to the microstructure survey (which occurred approximately 100 km away from the mooring site) for direct comparison with microstructure results. The finescale parameterization worked well, with discrepancies ranging from a factor of 1–2.5 depending on depth. The largest discrepancies occurred at depths with high shear. Mean Rω was 17, and Rω showed high variability with values ranging from 3 to 50 over 8 days. Observed ε was slightly elevated (factor of 2–3 compared with a later survey of 11 profiles taken over 3 h) from 25 to 125 m following a wind event which occurred at the beginning of the mooring deployment, reaching a maximum of ε= 6 × 10−10 W kg−1 at 30-m depth. Velocity signals associated with near-inertial waves (NIWs) were observed at depths greater than 200 m, where the Atlantic Water mass represents a reservoir of oceanic heat. However, no evidence of elevated ε or heat fluxes was observed in association with NIWs at these depths in either the microstructure survey or the finescale parameterization estimates.
    Description: This work was supported by NSF Grants PLR 14-56705 and PLR-1303791 and by NSF Graduate Research Fellowship Grant DGE-1650112.
    Keywords: Ocean ; Arctic ; Internal waves ; Turbulence ; Diapycnal mixing
    Repository Name: Woods Hole Open Access Server
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  • 6
    Publication Date: 2022-05-27
    Description: Author Posting. © American Meteorological Society, 2021. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 51(1),(2021): 3-17, https://doi.org/10.1175/JPO-D-20-0064.1.
    Description: The strong El Niño of 2014–16 was observed west of the Galápagos Islands through sustained deployment of underwater gliders. Three years of observations began in October 2013 and ended in October 2016, with observations at longitudes 93° and 95°W between latitudes 2°N and 2°S. In total, there were over 3000 glider-days of data, covering over 50 000 km with over 12 000 profiles. Coverage was superior closer to the Galápagos on 93°W, where gliders were equipped with sensors to measure velocity as well as temperature, salinity, and pressure. The repeated glider transects are analyzed to produce highly resolved mean sections and maps of observed variables as functions of time, latitude, and depth. The mean sections reveal the structure of the Equatorial Undercurrent (EUC), the South Equatorial Current, and the equatorial front. The mean fields are used to calculate potential vorticity Q and Richardson number Ri. Gradients in the mean are strong enough to make the sign of Q opposite to that of planetary vorticity and to have Ri near unity, suggestive of mixing. Temporal variability is dominated by the 2014–16 El Niño, with the arrival of depressed isopycnals documented in 2014 and 2015. Increases in eastward velocity advect anomalously salty water and are uncorrelated with warm temperatures and deep isopycnals. Thus, vertical advection is important to changes in heat, and horizontal advection is relevant to changes in salt. Implications of this work include possibilities for future research, model assessment and improvement, and sustained observations across the equatorial Pacific.
    Description: We gratefully acknowledge the support of the National Science Foundation (OCE-1232971, OCE-1233282) and the Ocean Observing and Monitoring Division of the National Oceanographic and Atmospheric Administration (NA13OAR4830216).
    Keywords: Ocean ; Tropics ; Currents ; El Nino ; In situ oceanic observations
    Repository Name: Woods Hole Open Access Server
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  • 7
    Publication Date: 2022-05-27
    Description: Author Posting. © American Meteorological Society, 2021. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of the Atmospheric and Oceanic Technology 38(1), (2021): 3-16, https://doi.org/10.1175/JTECH-D-20-0110.1.
    Description: Airborne expendable bathythermographs (AXBTs) are air-launched, single-use temperature–depth probes that telemeter temperature observations as VHF-modulated frequencies. This study describes the AXBT Real-Time Editing System (ARES), which is composed of two components: the ARES Data Acquisition System, which receives telemetered temperature–depth profiles with no external hardware other than a VHF radio receiver, and the ARES Profile Editing System, which quality controls AXBT temperature–depth profiles. The ARES Data Acquisition System performs fast Fourier transforms on windowed segments of the demodulated signal transmitted from the AXBT. For each segment, temperature is determined from peak frequency and depth from elapsed time since profile start. Valid signals are distinguished from noise by comparing peak signal levels and signal-to-noise ratios to predetermined thresholds. When evaluated using 387 profiles, the ARES Data Acquisition System produced temperature–depth profiles nearly identical to those generated using a Sippican MK-21 processor, while reducing the amount of noise from VHF interference included in those profiles. The ARES Profile Editor applies a series of automated checks to identify and correct common profile discrepancies before displaying the profile on an editing interface that provides simple user controls to make additional corrections. When evaluated against 1177 tropical Atlantic and Pacific AXBT profiles, the ARES automated quality control system successfully corrected 87% of the profiles without any required manual intervention. Necessary future work includes improvements to the automated quality control algorithm and algorithm evaluation against a broader dataset of temperature–depth profiles from around the world across all seasons.
    Description: This work was sponsored by the Office of Naval Research (Grants N000141812819 and N0001420WX00345) and the U.S. Navy’s Civilian Institution Office with the MIT–WHOI Joint Program.
    Keywords: Ocean ; In situ oceanic observations ; Profilers, oceanic
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  • 8
    Publication Date: 2022-09-25
    Description: Author Posting. © American Meteorological Society, 2022. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 52(4), (2022): 597–616, https://doi.org/10.1175/jpo-d-21-0121.1.
    Description: We provide a first-principles analysis of the energy fluxes in the oceanic internal wave field. The resulting formula is remarkably similar to the renowned phenomenological formula for the turbulent dissipation rate in the ocean, which is known as the finescale parameterization. The prediction is based on the wave turbulence theory of internal gravity waves and on a new methodology devised for the computation of the associated energy fluxes. In the standard spectral representation of the wave energy density, in the two-dimensional vertical wavenumber–frequency (m–ω) domain, the energy fluxes associated with the steady state are found to be directed downscale in both coordinates, closely matching the finescale parameterization formula in functional form and in magnitude. These energy transfers are composed of a “local” and a “scale-separated” contributions; while the former is quantified numerically, the latter is dominated by the induced diffusion process and is amenable to analytical treatment. Contrary to previous results indicating an inverse energy cascade from high frequency to low, at odds with observations, our analysis of all nonzero coefficients of the diffusion tensor predicts a direct energy cascade. Moreover, by the same analysis fundamental spectra that had been deemed “no-flux” solutions are reinstated to the status of “constant-downscale-flux” solutions. This is consequential for an understanding of energy fluxes, sources, and sinks that fits in the observational paradigm of the finescale parameterization, solving at once two long-standing paradoxes that had earned the name of “oceanic ultraviolet catastrophe.”
    Description: The authors gratefully acknowledge support from the ONR Grant N00014-17-1-2852. YL gratefully acknowledges support from NSF DMS Award 2009418.
    Description: 2022-09-25
    Keywords: Ocean ; Gravity waves ; Nonlinear dynamics ; Ocean dynamics ; Mixing ; Fluxes ; Isopycnal coordinates ; Nonlinear models
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  • 9
    Publication Date: 2022-09-15
    Description: Author Posting. © American Meteorological Society, 2022. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of the Atmospheric and Oceanic Technology 39(2), (2022): 223–235, https://doi.org/10.1175/JTECH-D-21-0110.1.
    Description: Previous work with simulations of oceanographic high-frequency (HF) radars has identified possible improvements when using maximum likelihood estimation (MLE) for direction of arrival; however, methods for determining the number of emitters (here defined as spatially distinct patches of the ocean surface) have not realized these improvements. Here we describe and evaluate the use of the likelihood ratio (LR) for emitter detection, demonstrating its application to oceanographic HF radar data. The combined detection–estimation methods MLE-LR are compared with multiple signal classification method (MUSIC) and MUSIC parameters for SeaSonde HF radars, along with a method developed for 8-channel systems known as MUSIC-Highest. Results show that the use of MLE-LR produces similar accuracy, in terms of the RMS difference and correlation coefficients squared, as previous methods. We demonstrate that improved accuracy can be obtained for both methods, at the cost of fewer velocity observations and decreased spatial coverage. For SeaSondes, accuracy improvements are obtained with less commonly used parameter sets. The MLE-LR is shown to be able to resolve simultaneous closely spaced emitters, which has the potential to improve observations obtained by HF radars operating in complex current environments.
    Description: This work was supported by the National Science Foundation (NSF) under Grant OCE-1658475. Computing resources were provided by the UCSB Center for Scientific Computing through an NSF MRSEC (DMR-1720256) and NSF CNS-1725797.
    Keywords: Ocean ; Algorithms ; Data quality control ; Radars/radar observations ; Remote sensing ; Surface observations ; Quality assurance/control
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  • 10
    Publication Date: 2022-06-10
    Description: Author Posting. © American Meteorological Society , 2021. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Zippel, S. F., Farrar, J. T., Zappa, C. J., Miller, U., St Laurent, L., Ijichi, T., Weller, R. A., McRaven, L., Nylund, S., & Le Bel, D. Moored turbulence measurements using pulse-coherent doppler sonar. Journal of Atmospheric and Oceanic Technology, 38(9), (2021): 1621–1639, https://doi.org/10.1175/JTECH-D-21-0005.1.
    Description: Upper-ocean turbulence is central to the exchanges of heat, momentum, and gases across the air–sea interface and therefore plays a large role in weather and climate. Current understanding of upper-ocean mixing is lacking, often leading models to misrepresent mixed layer depths and sea surface temperature. In part, progress has been limited by the difficulty of measuring turbulence from fixed moorings that can simultaneously measure surface fluxes and upper-ocean stratification over long time periods. Here we introduce a direct wavenumber method for measuring turbulent kinetic energy (TKE) dissipation rates ϵ from long-enduring moorings using pulse-coherent ADCPs. We discuss optimal programming of the ADCPs, a robust mechanical design for use on a mooring to maximize data return, and data processing techniques including phase-ambiguity unwrapping, spectral analysis, and a correction for instrument response. The method was used in the Salinity Processes Upper-Ocean Regional Study (SPURS) to collect two year-long datasets. We find that the mooring-derived TKE dissipation rates compare favorably to estimates made nearby from a microstructure shear probe mounted to a glider during its two separate 2-week missions for O(10−8) ≤ ϵ ≤ O(10−5) m2 s−3. Periods of disagreement between turbulence estimates from the two platforms coincide with differences in vertical temperature profiles, which may indicate that barrier layers can substantially modulate upper-ocean turbulence over horizontal scales of 1–10 km. We also find that dissipation estimates from two different moorings at 12.5 and at 7 m are in agreement with the surface buoyancy flux during periods of strong nighttime convection, consistent with classic boundary layer theory.
    Description: This work was funded by NASA as part of the Salinity Processes in the Upper Ocean Regional Study (SPURS), supporting field work for SPURS-1 (NASA Grant NNX11AE84G), for SPURS-2 (NASA Grant NNX15AG20G), and for analysis (NASA Grant 80NSSC18K1494). Funding for early iterations of this project associated with the VOCALS project and Stratus 9 mooring was provided by NSF (Awards 0745508 and 0745442). Additional funding was provided by ONR Grant N000141812431 and NSF Award 1756839. The Stratus Ocean Reference Station is funded by the Global Ocean Monitoring and Observing Program of the National Oceanic and Atmospheric Administration (CPO FundRef Number 100007298), through the Cooperative Institute for the North Atlantic Region (CINAR) under Cooperative Agreement NA14OAR4320158. Microstructure measurements made from the glider were supported by NSF (Award 1129646).
    Keywords: Ocean ; Turbulence ; Atmosphere-ocean interaction ; Boundary layer ; Oceanic mixed layer ; In situ oceanic observations
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  • 11
    Publication Date: 2022-06-17
    Description: Author Posting. © American Meteorological Society, 2022. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 52(3), (2022): 363–382, https://doi.org/10.1175/jpo-d-21-0084.1.
    Description: Meltwater from Greenland is an important freshwater source for the North Atlantic Ocean, released into the ocean at the head of fjords in the form of runoff, submarine melt, and icebergs. The meltwater release gives rise to complex in-fjord transformations that result in its dilution through mixing with other water masses. The transformed waters, which contain the meltwater, are exported from the fjords as a new water mass Glacially Modified Water (GMW). Here we use summer hydrographic data collected from 2013 to 2019 in Upernavik, a major glacial fjord in northwest Greenland, to describe the water masses that flow into the fjord from the shelf and the exported GMWs. Using an optimum multi-parameter technique across multiple years we then show that GMW is composed of 57.8% ± 8.1% Atlantic Water (AW), 41.0% ± 8.3% Polar Water (PW), 1.0% ± 0.1% subglacial discharge, and 0.2% ± 0.2% submarine meltwater. We show that the GMW fractional composition cannot be described by buoyant plume theory alone since it includes lateral mixing within the upper layers of the fjord not accounted for by buoyant plume dynamics. Consistent with its composition, we find that changes in GMW properties reflect changes in the AW and PW source waters. Using the obtained dilution ratios, this study suggests that the exchange across the fjord mouth during summer is on the order of 50 mSv (1 Sv ≡ 106 m3 s−1) (compared to a freshwater input of 0.5 mSv). This study provides a first-order parameterization for the exchange at the mouth of glacial fjords for large-scale ocean models.
    Description: This work was partially supported by the Centre for Climate Dynamics (SKD) at the Bjerknes Centre for Climate Research. The authors thank NASA and the OMG consortium for making observational data freely available, and acknowledge M. Morlighem for good support in the early stages of this project. MM and LHS and would also like to thank Ø. Paasche, the ACER project, and the U.S. Norway Fulbright Foundation for the Norwegian Arctic Chair Grant 2019–20 that made the visit to Scripps Institution of Oceanography possible. FS acknowledges support from the DOE Office of Science Grant DE-SC0020073, Heising-Simons Foundation and from NSF and OCE-1756272. DAS acknowledges support from U.K. NERC Grants NE/P011365/1, NE/T011920/1, and NERC Independent Research Fellowship NE/T011920/1. MW was supported by an appointment to the NASA Postdoctoral Program at the Jet Propulsion Laboratory, California Institute of Technology, administered by the Universities Space Research Association under contract with NASA. CSA would like to acknowledge Geocenter Denmark for support to the project “Upernavik Glacier.”
    Keywords: Ocean ; Arctic ; Atlantic Ocean ; Glaciers ; Ice sheets ; Buoyancy ; Entrainment ; In situ oceanic observations ; Annual variations
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  • 12
    Publication Date: 2022-06-13
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Fine, E., MacKinnon, J., Alford, M., Middleton, L., Taylor, J., Mickett, J., Cole, S., Couto, N., Boyer, A., & Peacock, T. Double diffusion, shear instabilities, and heat impacts of a pacific summer water intrusion in the Beaufort Sea. Journal of Physical Oceanography, 52(2), (2022): 189–203, https://doi.org/10.1175/jpo-d-21-0074.1.
    Description: Pacific Summer Water eddies and intrusions transport heat and salt from boundary regions into the western Arctic basin. Here we examine concurrent effects of lateral stirring and vertical mixing using microstructure data collected within a Pacific Summer Water intrusion with a length scale of ∼20 km. This intrusion was characterized by complex thermohaline structure in which warm Pacific Summer Water interleaved in alternating layers of O(1) m thickness with cooler water, due to lateral stirring and intrusive processes. Along interfaces between warm/salty and cold/freshwater masses, the density ratio was favorable to double-diffusive processes. The rate of dissipation of turbulent kinetic energy (ε) was elevated along the interleaving surfaces, with values up to 3 × 10−8 W kg−1 compared to background ε of less than 10−9 W kg−1. Based on the distribution of ε as a function of density ratio Rρ, we conclude that double-diffusive convection is largely responsible for the elevated ε observed over the survey. The lateral processes that created the layered thermohaline structure resulted in vertical thermohaline gradients susceptible to double-diffusive convection, resulting in upward vertical heat fluxes. Bulk vertical heat fluxes above the intrusion are estimated in the range of 0.2–1 W m−2, with the localized flux above the uppermost warm layer elevated to 2–10 W m−2. Lateral fluxes are much larger, estimated between 1000 and 5000 W m−2, and set an overall decay rate for the intrusion of 1–5 years.
    Description: This work was supported by ONR Grant N00014-16-1-2378 and NSF Grants PLR 14-56705 and PLR-1303791, NSF Graduate Research Fellowship Grant DGE-1650112, as well as by the Postdoctoral Scholar Program at Woods Hole Oceanographic Institution, with funding provided by the Weston Howland Jr. Postdoctoral Scholarship.
    Keywords: Arctic ; Diapycnal mixing ; Diffusion ; Fluxes ; Instability ; Mixing ; Turbulence
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  • 13
    Publication Date: 2022-08-05
    Description: Author Posting. © American Meteorological Society, 2022. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of the Atmospheric and Oceanic Technology 39(4), (2022): 491–502, https://doi.org/10.1175/jtech-d-21-0046.1.
    Description: The Air-Launched Autonomous Micro Observer (ALAMO) is a versatile profiling float that can be launched from an aircraft to make temperature and salinity observations of the upper ocean for over a year with high temporal sampling. Similar in dimensions and weight to an airborne expendable bathythermograph (AXBT), but with the same capability as Argo profiling floats, ALAMOs can be deployed from an A-sized (sonobuoy) launch tube, the stern ramp of a cargo plane, or the door of a small aircraft. Unlike an AXBT, however, the ALAMO float directly measures pressure, can incorporate additional sensors, and is capable of performing hundreds of ocean profiles compared to the single temperature profile provided by an AXBT. Upon deployment, the float parachutes to the ocean, releases the air-deployment package, and immediately begins profiling. Ocean profile data along with position and engineering information are transmitted via the Iridium satellite network, automatically processed, and then distributed by the Global Telecommunications System for use by the operational forecasting community. The ALAMO profiling mission can be modified using the two-way Iridium communications to change the profiling frequency and depth. Example observations are included to demonstrate the ALAMO’s utility.
    Description: This work was supported by the National Oceanographic and Atmospheric Administration under Grants NA13OAR4830233 (as part of CINAR Sandy Supplemental funding from the Disaster Relief Appropriations Act of 2013) and NA14OAR4320158 and by Office of Naval Research under Grants N0001416WX01384, N0001416WX01262, and N000141512293. ALAMO floats are commercially available from MRV Systems, LLC (https://www.mrvsys.com).
    Keywords: Ocean ; Hurricanes ; Ocean dynamics ; Mixed layer ; Aircraft observations ; Instrumentation/sensors
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  • 14
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of [publisher] for personal use, not for redistribution. The definitive version was published in Schlundt, M., Farrar, J. T., Bigorre, S. P., Plueddemann, A. J., & Weller, R. A. (2020). Accuracy of wind observations from open-ocean buoys: correction for flow distortion. Journal of Atmospheric and Oceanic Technology, 37(4), 687-703, doi:10.1175/JTECH-D-19-0132.1.
    Description: The comparison of equivalent neutral winds obtained from (i) four WHOI buoys in the subtropics and (ii) scatterometer estimates at those locations reveals a root-mean-square (RMS) difference of 0.56–0.76 m s−1. To investigate this RMS difference, different buoy wind error sources were examined. These buoys are particularly well suited to examine two important sources of buoy wind errors because 1) redundant anemometers and a comparison with numerical flow simulations allow us to quantitatively assess flow distortion errors, and 2) 1-min sampling at the buoys allows us to examine the sensitivity of buoy temporal sampling/averaging in the buoy–scatterometer comparisons. The interanemometer difference varies as a function of wind direction relative to the buoy wind vane and is consistent with the effects of flow distortion expected based on numerical flow simulations. Comparison between the anemometers and scatterometer winds supports the interpretation that the interanemometer disagreement, which can be up to 5% of the wind speed, is due to flow distortion. These insights motivate an empirical correction to the individual anemometer records and subsequent comparison with scatterometer estimates show good agreement.
    Description: We gratefully acknowledge the help of three anonymous reviewers, whose input greatly improved the paper. In particular, one reviewer pointed out a mistake in our initial interpretation of scatterometer stability, which was corrected in the final manuscript. JTF and MS were supported by NASA Grant NNX14AM71G (International Ocean Vector Winds Science Team). The SPURS observations were supported by NASA (Grants NNX11AE84G, NNX15AG20G, and 80NSSC18K1494). The Stratus, NTAS, and WHOTS ocean reference stations (ORS) are long-term surface moorings deployed as part of the OceanSITES (http://www.oceansites.org) component of the Global Ocean Observing System, and are supported by NOAA’s Climate Program Office’s Ocean Observing and Monitoring Division, as are RAW, AJP, and SPB through the Cooperative Institute for the North Atlantic Region (CINAR) under Cooperative Agreement NA14OAR4320158 with NOAA Climate Program Office (CPO) (FundRef No. 100007298). The technical staff of the UOP Group at WHOI and the crews of NOAA and UNOLS vessels have been essential to the successful long-term maintenance of the ORS.
    Keywords: Ocean ; Wind ; Buoy observations ; Remote sensing
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  • 15
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 50(8),(2020): 2203-2226, doi:10.1175/JPO-D-19-0313.1.
    Description: The emerging view of the abyssal circulation is that it is associated with bottom-enhanced mixing, which results in downwelling in the stratified ocean interior and upwelling in a bottom boundary layer along the insulating and sloping seafloor. In the limit of slowly varying vertical stratification and topography, however, boundary layer theory predicts that these upslope and downslope flows largely compensate, such that net water mass transformations along the slope are vanishingly small. Using a planetary geostrophic circulation model that resolves both the boundary layer dynamics and the large-scale overturning in an idealized basin with bottom-enhanced mixing along a midocean ridge, we show that vertical variations in stratification become sufficiently large at equilibrium to reduce the degree of compensation along the midocean ridge flanks. The resulting large net transformations are similar to estimates for the abyssal ocean and span the vertical extent of the ridge. These results suggest that boundary flows generated by mixing play a crucial role in setting the global ocean stratification and overturning circulation, requiring a revision of abyssal ocean theories.
    Description: We acknowledge funding support from National Science Foundation Awards 6932401 and 6936732.
    Keywords: Abyssal circulation ; Bottom currents ; Boundary currents ; Mixing ; Bottom currents/bottom water ; Boundary layer
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  • 16
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    American Meteorological Society
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 50(8),(2020): 2315-2321, doi:10.1175/JPO-D-19-0327.1.
    Description: Low-frequency currents and eddies transport sediment, pathogens, larvae, and heat along the coast and between the shoreline and deeper water. Here, low-frequency currents (between 0.1 and 4.0 mHz) observed in shallow surfzone waters for 120 days during a wide range of wave conditions are compared with theories for generation by instabilities of alongshore currents, by ocean-wave-induced sea surface modulations, and by a nonlinear transfer of energy from breaking waves to low-frequency motions via a two-dimensional inverse energy cascade. For these data, the low-frequency currents are not strongly correlated with shear of the alongshore current, with the strength of the alongshore current, or with wave-group statistics. In contrast, on many occasions, the low-frequency currents are consistent with an inverse energy cascade from breaking waves. The energy of the low-frequency surfzone currents increases with the directional spread of the wave field, consistent with vorticity injection by short-crested breaking waves, and structure functions increase with spatial lags, consistent with a cascade of energy from few-meter-scale vortices to larger-scale motions. These results include the first field evidence for the inverse energy cascade in the surfzone and suggest that breaking waves and nonlinear energy transfers should be considered when estimating nearshore transport processes across and along the coast.
    Description: Funding was provided by a Vannevar Bush Faculty Fellowship [from OUSD(R&E)] and NSF.
    Keywords: Ocean ; Coastlines ; Eddies ; Wave breaking
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  • 17
    Publication Date: 2022-05-26
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Cusack, J. M., Voet, G., Alford, M. H., Girton, J. B., Carter, G. S., Pratt, L. J., Pearson-Potts, K. A., & Tan, S. Persistent turbulence in the Samoan Passage. Journal of Physical Oceanography, 49(12), (2019): 3179-3197, doi: 10.1175/JPO-D-19-0116.1.
    Description: Abyssal waters forming the lower limb of the global overturning circulation flow through the Samoan Passage and are modified by intense mixing. Thorpe-scale-based estimates of dissipation from moored profilers deployed on top of two sills for 17 months reveal that turbulence is continuously generated in the passage. Overturns were observed in a density band in which the Richardson number was often smaller than ¼, consistent with shear instability occurring at the upper interface of the fast-flowing bottom water layer. The magnitude of dissipation was found to be stable on long time scales from weeks to months. A second array of 12 moored profilers deployed for a shorter duration but profiling at higher frequency was able to resolve variability in dissipation on time scales from days to hours. At some mooring locations, near-inertial and tidal modulation of the dissipation rate was observed. However, the modulation was not spatially coherent across the passage. The magnitude and vertical structure of dissipation from observations at one of the major sills is compared with an idealized 2D numerical simulation that includes a barotropic tidal forcing. Depth-integrated dissipation rates agree between model and observations to within a factor of 3. The tide has a negligible effect on the mean dissipation. These observations reinforce the notion that the Samoan Passage is an important mixing hot spot in the global ocean where waters are being transformed continuously.
    Description: The authors thank Zhongxiang Xao and Jody Klymak, who provided earlier setups of the numerical model, and also Arjun Jagannathan for insightful discussions on the subject of flow over topography. We also thank John Mickett and Eric Boget for their assistance in designing, deploying, and recovering the moorings. In addition, we also thank the crew and scientists aboard the R/V Revelle and R/V Thompson, without whom the data presented in this paper could not have been gathered. Ilker Fer and two anonymous reviewers provided thoughtful feedback that improved the paper. This work was supported by the National Science Foundation under Grants OCE-1029268, OCE-1029483, OCE-1657264, OCE-1657795, OCE-1657870, and OCE-1658027.
    Keywords: Gravity waves ; Turbulence ; Abyssal circulation ; Mixing ; Tides
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  • 18
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of the Atmospheric and Oceanic Technology 37(5), (2020): 807-824, doi:10.1175/JTECH-D-19-0054.1.
    Description: Marine mammals are under growing pressure as anthropogenic use of the ocean increases. Ship strikes of large whales and loud underwater sound sources including air guns for marine geophysical prospecting and naval midfrequency sonar are criticized for their possible negative effects on marine mammals. Competent authorities regularly require the implementation of mitigation measures, including vessel speed reductions or shutdown of acoustic sources if marine mammals are sighted in sensitive areas or in predefined exclusion zones around a vessel. To ensure successful mitigation, reliable at-sea detection of animals is crucial. To date, ship-based marine mammal observers are the most commonly implemented detection method; however, thermal (IR) imaging–based automatic detection systems have been used in recent years. This study evaluates thermal imaging–based automatic whale detection technology for its use across different oceans. The performance of this technology is characterized with respect to environmental conditions, and an automatic detection algorithm for whale blows is presented. The technology can detect whales in polar, temperate, and subtropical ocean regimes over distances of up to several kilometers and outperforms marine mammal observers in the number of whales detected. These results show that thermal imaging technology can be used to assist in providing protection for marine mammals against ship strike and acoustic impact across the world’s oceans.
    Description: This work was funded by the Office of Naval Research (ONR) under Award N000141310856, by the Environmental Studies Research Fund (ESRF; esrfunds.org) under Award 2014-03S and by the Alfred-Wegener-Institute Helmholtz Zentrum für Polar- und Meeresforschung. DPZ and OB declare competing financial interests: 1) Patent US8941728B2, DE102011114084B4: A method for automatic real-time marine mammal detection. The patent describes the ideas basic to the automatic whale detection software as used to acquire and process the data presented in this paper. 2) Licensing of the Tashtego automatic whale detection software to the manufacturer of IR sensor. The authors confirm that these competing financial interests did not alter their adherence good scientific practice. We thank P. Abgrall, J. Coffey, K. Keats, B. Mactavish, V. Moulton, and S. Penney-Belbin for data collection or IR image review. We thank S. Besaw, J. Christian, A. Coombs, P. Coombs, W. Costello, T. Elliott, E. Evans, I. Goudie, C. Jones, K. Knowles, R. Martin, A. Murphy, D. and J. Shepherd; and the staffs at the Irish Loop Express, the Myrick Wireless Interpretive Centre, the Mistaken Point Ecological Reserve, and the lighthouse keepers for logistical assistance at our remote field site. We thank D. Boutilier and B. McDonald (DFO) for assisting us in obtaining license to occupy permits for Cape Race. We thank D. Taylor (ESRF Research Manager) for his support.
    Keywords: Ocean ; Instrumentation/sensors ; Remote sensing ; Animal studies ; Field experiments
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  • 19
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 50(6),(2020): 1717-1732, doi:10.1175/JPO-D-19-0273.1.
    Description: Recent measurements and modeling indicate that roughly half of the Pacific-origin water exiting the Chukchi Sea shelf through Barrow Canyon forms a westward-flowing current known as the Chukchi Slope Current (CSC), yet the trajectory and fate of this current is presently unknown. In this study, through the combined use of shipboard velocity data and information from five profiling floats deployed as quasi-Lagrangian particles, we delve further into the trajectory and the fate of the CSC. During the period of observation, from early September to early October 2018, the CSC progressed far to the north into the Chukchi Borderland. The northward excursion is believed to result from the current negotiating Hanna Canyon on the Chukchi slope, consistent with potential vorticity dynamics. The volume transport of the CSC, calculated using a set of shipboard transects, decreased from approximately 2 Sv (1 Sv ≡ 106 m3 s−1) to near zero over a period of 4 days. This variation can be explained by a concomitant change in the wind stress curl over the Chukchi shelf from positive to negative. After turning northward, the CSC was disrupted and four of the five floats veered offshore, with one of the floats permanently leaving the current. It is hypothesized that the observed disruption was due to an anticyclonic eddy interacting with the CSC, which has been observed previously. These results demonstrate that, at times, the CSC can get entrained into the Beaufort Gyre.
    Description: This work was principally supported by the Stratified Ocean Dynamics of the Arctic (SODA) program under ONR Grant N000141612450. S.B. wants to thank Labex iMust for supporting his research. R.S.P. acknowledges U.S. National Science Foundation Grants OPP-1702371, OPP-1733564, and PLR-1303617. P.L. acknowledges National Oceanic and Atmospheric Administration Grant NA14-OAR4320158. M.L. acknowledges National Natural Science Foundation of China Grants 41706025 and 41506018. T.P. thanks ENS de Lyon for travel support funding. The authors gratefully acknowledge the support of Steve Jayne, Pelle Robins, and Alex Ekholm at the Woods Hole Oceanographic Institution for preparation, deployment, and data provision for the ALTO floats. Chanhyung Jeon assisted in preparing and deploying the floats. The invaluable support of the crew of the R/V Sikuliaq is also gratefully acknowledged.
    Keywords: Arctic ; Continental shelf/slope ; Currents ; Mixing
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  • 20
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 50(12), (2020): 3379-3402, https://do.org/10.1175/JPO-D-20-0028.1.
    Description: One of the largest and most persistent features in the Alboran Sea is the Western Alboran Gyre (WAG), an anticyclonic recirculation bounded by the Atlantic Jet (AJ) to the north and the Moroccan coast to the south. Eulerian budgets from several months of a high-resolution model run are used to examine the exchange of water across the Eulerian WAG’s boundary and the processes affecting the salinity, temperature, and vorticity of the WAG. The volume transport across the sides of the WAG is found to be related to vertical isopycnal movement at the base of the gyre. Advection is found to drive a decay in the salinity minimum and anticyclonic vorticity of the Eulerian WAG. Given the large contributions of advection, a Lagrangian analysis is performed, revealing geometric aspects of the exchange that are hidden in an Eulerian view. In particular, stable and unstable manifolds identify a stirring region around the outer reaches of the gyre where water is exchanged with the WAG on a time scale of weeks. Its complement is an inner core that expands with depth and exchanges water with its surroundings on much longer time scales. The 3D evolution of one parcel, or lobe, of water as it enters the WAG is also described, identifying a general Lagrangian subduction pathway.
    Description: This work was supported on DOD (MURI) Grant N000141110087, ONR Grant N000141812417, and NSF Grant OCE-1558806.
    Description: 2021-05-18
    Keywords: Ocean ; Mediterranean Sea ; Fluxes ; Lagrangian circulation/transport ; General circulation models
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  • 21
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 50(7), (2020): 1839-1852, https://doi.org/10.1175/JPO-D-19-0209.1.
    Description: The Lagrangian characteristics of the surface flow field arising when an idealized, anticyclonic, mesoscale, isolated deep-ocean eddy collides with continental slope and shelf topography are explored. In addition to fluid parcel trajectories, we consider the trajectories of biological organisms that are able to navigate and swim, and for which shallow water is a destination. Of particular interest is the movement of organisms initially located in the offshore eddy, the manner in which the eddy influences the ability of the organisms to reach the shelf break, and the spatial and temporal distributions of organisms that do so. For nonswimmers or very slow swimmers, the organisms arrive at the shelf break in distinct pulses, with different pulses occurring at different locations along the shelf break. This phenomenon is closely related to the episodic formation of trailing vortices that are formed after the eddy collides with the continental slope, turns, and travels parallel to the coast. Analysis based on finite-time Lyapunov exponents reveals initial locations of all successful trajectories reaching the shoreline, and provides maps of the transport pathways showing that much of the cross-shelf-break transport occurs in the lee of the eddy as it moves parallel to the shore. The same analysis shows that the onshore transport is interrupted after a trailing vortex detaches. As the swimming speeds are increased, the organisms are influenced less by the eddy and tend to show up en mass and in a single pulse.
    Description: IR and LP were supported by National Science Foundation (NSF) Grant OCE-1558806. DC was supported by NSF U.S. National Science Foundation’s Physical Oceanography program through Grants OCE-1059632 and OCE-1433953 as well as the Academic Programs Office, Woods Hole Oceanographic Institution. We acknowledge high-performance computing support from Yellowstone (http://n2t.net/ark:/85065/d7wd3xhc) provided by NCAR’s Computational and Information Systems Laboratory, sponsored by the National Science Foundation.
    Keywords: Ocean ; Eddies ; Nonlinear dynamics ; Transport
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  • 22
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2021. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Climate 34(5), (2021): 1767-1788, https://doi.org/10.1175/JCLI-D-19-1020.1.
    Description: Marine heatwaves along the coast of Western Australia, referred to as Ningaloo Niño, have had dramatic impacts on the ecosystem in the recent decade. A number of local and remote forcing mechanisms have been put forward; however, little is known about the depth structure of such temperature extremes. Utilizing an eddy-active global ocean general circulation model, Ningaloo Niño and the corresponding cold Ningaloo Niña events are investigated between 1958 and 2016, with a focus on their depth structure. The relative roles of buoyancy and wind forcing are inferred from sensitivity experiments. Composites reveal a strong symmetry between cold and warm events in their vertical structure and associated large-scale spatial patterns. Temperature anomalies are largest at the surface, where buoyancy forcing is dominant, and extend down to 300-m depth (or deeper), with wind forcing being the main driver. Large-scale subsurface anomalies arise from a vertical modulation of the thermocline, extending from the western Pacific into the tropical eastern Indian Ocean. The strongest Ningaloo Niños in 2000 and 2011 are unprecedented compound events, where long-lasting high temperatures are accompanied by extreme freshening, which emerges in association with La Niñas, that is more common and persistent during the negative phase of the interdecadal Pacific oscillation. It is shown that Ningaloo Niños during La Niña phases have a distinctively deeper reach and are associated with a strengthening of the Leeuwin Current, while events during El Niño are limited to the surface layer temperatures, likely driven by local atmosphere–ocean feedbacks, without a clear imprint on salinity and velocity.
    Description: The following support is gratefully acknowledged: the Feodor-Lynen Fellowship by the Alexander von Humboldt Foundation and the WHOI Postdoctoral Scholar program (to SR), the Office of Naval Research under project number N-00014-19-12646 (to GG), the James E. and Barbara V. Moltz Fellowship for Climate-Related Research (to CCU), and IndoArchipel from the Deutsche Forschungsgemeinschaft (DFG) as part of the Special Priority Program (SPP)-1889 “Regional Sea Level Change and Society” (SeaLevel) (for PW).
    Keywords: Ocean ; Australia ; Indian Ocean ; Extreme events ; General circulation models ; Ocean models
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  • 23
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 50(3),(2020): 595-613, doi:10.1175/JPO-D-19-0108.1.
    Description: Small estuaries in Mediterranean climates display pronounced salinity variability at seasonal and event time scales. Here, we use a hydrodynamic model of the Coos Estuary, Oregon, to examine the seasonal variability of the salinity dynamics and estuarine exchange flow. The exchange flow is primarily driven by tidal processes, varying with the spring–neap cycle rather than discharge or the salinity gradient. The salinity distribution is rarely in equilibrium with discharge conditions because during the wet season the response time scale is longer than discharge events, while during low flow it is longer than the entire dry season. Consequently, the salt field is rarely fully adjusted to the forcing and common power-law relations between the salinity intrusion and discharge do not apply. Further complicating the salinity dynamics is the estuarine geometry that consists of multiple branching channel segments with distinct freshwater sources. These channel segments act as subestuaries that import both higher- and lower-salinity water and export intermediate salinities. Throughout the estuary, tidal dispersion scales with tidal velocity squared, and likely includes jet–sink flow at the mouth, lateral shear dispersion, and tidal trapping in branching channel segments inside the estuary. While the estuarine inflow is strongly correlated with tidal amplitude, the outflow, stratification, and total mixing in the estuary are dependent on the seasonal variation in river discharge, which is similar to estuaries that are dominated by subtidal exchange flow.
    Description: We thank two anonymous reviewers for constructive comments, the staff of the South Slough National Estuarine Research Reserve for providing time series data, and Parker MacCready for sharing LiveOcean boundary conditions. This work was partially sponsored by the National Estuarine Research Reserve System Science Collaborative, which supports collaborative research that addresses coastal management problems important to the reserves. The Science Collaborative is funded by the National Oceanic and Atmospheric Administration and managed by the University of Michigan Water Center (NAI4NOS4190145). Computations were performed on the University of Oregon high performance computer Talapas.
    Description: 2020-08-26
    Keywords: Estuaries ; North Pacific Ocean ; Baroclinic flows ; Channel flows ; Dispersion ; Mixing
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  • 24
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Martini, K. I., Murphy, D. J., Schmitt, R. W., & Larson, N. G. Reply to "comments on 'corrections for pumped SBE 41CP CTDs determined from stratified tank experiments'". Journal of Atmospheric and Oceanic Technology, 37(2), (2020): 357-363, doi:10.1175/JTECH-D-19-0171.1.
    Description: The response in Johnson (2020) that the method used to determine cell thermal mass correction coefficients for SBE 41CP CTD data from Argo floats is biased as determined by Martini et al. (2019) is valid. However, the recommendation for correction coefficients should not be followed due to these three errors in Johnson (2020): Alignment is as large a source of dynamic error as cell thermal mass in the SBE 41CP CTD. Order of operations was overlooked, so that cell thermal mass is used to correct for alignment errors caused by the temporal mismatch of temperature and conductivity. The cell thermal mass corrections determined in Johnson et al. (2007) and Johnson (2020) also bias salinity. In this response we will do the following: Detail how the corrections in Johnson (2020) are biased because the optimization procedure does not accurately model physics in the tank and conductivity cell. Verify using in situ data from Argo floats deployed in the ocean that alignment is a significant source of error for the SBE 41CP as shown in Martini et al. (2019). Determine cell thermal mass correction coefficients from the stratified tank experiment merging the methods of Johnson (2020) and Martini et al. (2019) to optimize against a model that better represents the physics in the tank and conductivity cell. Compare the corrections using in situ data using the coefficients determined in Johnson et al. (2007), Martini et al. (2019), Johnson (2020), and this manuscript.
    Description: Thanks to Pelle Robbins for finding the in situ profiles used for this analysis in the vast database of Argo floats, John Gilson showing me how to access that high-resolution data, Ray Schmitt for use of the stratified tank, Susan Wijffels, Breck Owens, and Annie Wong for intellectual support, and Diego Sorrentino and Vlad Simontov for validating the sampling scheme in the SBE 41CP.
    Description: 2020-08-24
    Keywords: Ocean ; Algorithms ; Data processing ; In situ oceanic observations ; Measurements ; Profilers, oceanic
    Repository Name: Woods Hole Open Access Server
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