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  • 1
  • 2
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    PANGAEA
    In:  Supplement to: Wessels, Wiebke; Sprungala, Susanne; Watson, Sue-Ann; Miller, David J; Bourne, David G (2017): The microbiome of the octocoral Lobophytum pauciflorum: minor differences between sexes and resilience to short-term stress. FEMS Microbiology Ecology, 93(5), https://doi.org/10.1093/femsec/fix013
    Publication Date: 2024-03-15
    Description: Bacteria associated with marine invertebrates are thought to have a range of important roles that benefit the host including production of compounds that may exclude pathogenic microorganisms and recycling of essential nutrients. This study characterised the microbiome of a gonochoric octocoral, Lobophytum pauciflorum, and investigated whether either sex or environmental stresses influenced the diversity of the associated microbiome through amplicon profiling of the bacterial 16S rRNA gene. Sequences affiliated to Spirochaetaceae and Endozoicimonaceae dominated the microbiome of L. pauciflorum, representing 43% and 21% of the community, respectively. Among the dominant class affiliations, no sex-specific differences were detected, though unassigned sequences were at a 2-fold higher relative abundance in samples from female individuals than from males. These potentially novel sequences contributed to observed differences between sexes as detected by a multivariate analysis at the OTU level. Exposing L. pauciflorum fragments to increased temperature (31°C), decreased pH (7.9) or both stressors simultaneously for 12 days did not significantly alter the microbial community, indicating that the soft coral microbiome is relatively resilient to short-term environmental stress.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Alpha diversity; Alpha diversity, standard deviation; Animalia; Aragonite saturation state; Benthic animals; Benthos; Bicarbonate ion; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Class; Cnidaria; Coast and continental shelf; Community composition and diversity; Containers and aquaria (20-1000 L or 〈 1 m**2); EXP; Experiment; Experiment duration; Family; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Laboratory experiment; Lobophytum pauciflorum; OA-ICC; Ocean Acidification International Coordination Centre; Operational taxonomic unit; Operational taxonomic unit, standard deviation; Orpheus_Pelorus_Island; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, standard deviation; Registration number of species; Salinity; Salinity, standard deviation; Sequence abundance; Sequence abundance, standard error; Shannon Diversity Index; Shannon Diversity Index, standard deviation; Simpson index of diversity; Simpson index of diversity, standard deviation; Single species; South Pacific; Species; Temperature; Temperature, water; Temperature, water, standard deviation; Treatment; Tropical; Type; Uniform resource locator/link to reference
    Type: Dataset
    Format: text/tab-separated-values, 1036 data points
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  • 3
    Publication Date: 2019-07-16
    Description: Arctica islandica is the longest-lived non-colonial animal found so far, and reaches individual ages of 150years in the German Bight (GB) and more than 350years around Iceland (IC). Frequent burrowing and physiological adjustments to low tissue oxygenation in the burrowed state are proposed to lower mitochondrial reactive oxygen species (ROS) formation. We investigated burrowing patterns and shell water partial pressure of oxygen (PO2) in experiments with live A. islandica. Furthermore, succinate accumulation and antioxidant defences were recorded in tissues of bivalves in the normoxic or metabolically downregulated state, as well as ROS formation in isolated gills exposed to normoxia, hypoxia and hypoxia/ reoxygenation. IC bivalves burrowed more frequently and deeper in winter than in summer under in situ conditions, and both IC and GB bivalves remained burrowed for between 1 and 6days in laboratory experiments. Shell water PO2 was 〈5kPa when bivalves were maintained in fully oxygenated seawater, and ventilation increased before animals entered the state of metabolic depression. Succinate did not accumulate upon spontaneous shell closure, although shell water PO2 was 0kPa for over 24h. A ROS burst was absent in isolated gills during hypoxia/reoxygenation, and antioxidant enzyme activities were not enhanced in metabolically depressed clams compared with normally respiring clams. Postponing the onset of anaerobiosis in the burrowed state and under hypoxic exposure presumably limits the need for elevated recovery respiration upon surfacing and oxidative stress during reoxygenation.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 4
    Publication Date: 2019-07-16
    Description: The bivalve Arctica islandica is extremely long lived (〉400 years) and can tolerate long periods of hypoxia and anoxia. European populations differ in maximum life spans from 40 years in the Baltic to 〉400 years around Iceland. Characteristic behavior In their natural environment and under laboratory conditions,of A. islandica performs involves phases of metabolic rate depression (MRD) during which the animals burry into the sediment for several days and which suggested possibly supporting the long life span of some populations. The animals burrow into the sediment for some days an In the buried state d lower shelshell water oxygen concentrations to hypoxic andreaches even anoxic levels. In the present study wWe investigated gene regulation in individuals A. islandica fromof the a longer- lived (MLSP 150years) German Bight population and the a shorter- lived Baltic Sea population, experimentally exposed to different oxygen levels. A new A. islandica transcriptome enabled the identification of genes important during hypoxia/anoxia events and, more generally, gene mining for putative stress response and (anti-) aging genes. Exposed to low oxygen (0 and 2 kPa) conditions, German Bight individuals generally suppress gene transcription, whereas Baltic Sea bivalves enhanced gene transcription under anoxic incubation (0 kPa), and, further, decreased these transcription levels again during 6h of re-oxygenation. Hypoxic and anoxic exposure and subsequent re-oxygenation in Baltic Sea animals did not lead to increased protein oxidation or induction of apoptosis, emphasizing considerable hypoxia/re-oxygenation tolerance of in this species. The data suggest that the energy saving effect of MRD may not be an attribute of Baltic Sea A. islandica chronically exposed to high environmental variability of oxygenation and also temperature and salinity. Contrary, higher physiological flexibility and stress hardening may predispose these animals to perform a pronounced stress response at the expense of life span.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 5
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    Alfred Wegener Institute for Polar and Marine Research
    In:  EPIC3Berichte zur Polar- und Meeresforschung = Reports on polar and marine research, Bremerhaven, Alfred Wegener Institute for Polar and Marine Research, 722, 125 p., ISSN: 1866-3192
    Publication Date: 2018-10-19
    Repository Name: EPIC Alfred Wegener Institut
    Type: "Berichte zur Polar- und Meeresforschung" , notRev
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  • 6
    Publication Date: 2021-08-24
    Description: The ongoing environmental changes in the Southern Ocean may cause a dramatic decrease in habitat quality. Due to its central position in the food web, Antarctic krill (Euphausia superba) is a key species of the marine Antarctic ecosystem. It is therefore crucial to understand how increasing water temperatures affect important krill life-cycle processes. Here, a long-term (August – March) laboratory acclimation experiment at different temperature scenarios (0.5 ◦C, 1.5 ◦C, 2.5 ◦C, 3.5 ◦C, 5 ◦C, 7 ◦C) was performed and the effects of elevated temperatures on whole animal parameters (O2 consumption, body length, length of the digestive gland) were analyzed. The response of krill oxygen consumption to different experimental temperatures differed between acute/short-term and long-term acclimation. After 8 months, krill oxygen consumption remained unchanged up to temperatures of 3.5 ◦C and was significantly higher at temperatures 〉 3.5 ◦C. Krill acclimated to temperatures ≥ 3.5 ◦C were significantly smaller at the end of the experiment. Limited food intake and/or conversion may have contributed to this effect, especially pronounced after the onset of the reproductive period. In addition, the seasonal growth pattern in males differed from that of females. Together, our findings indicate that warming Southern Ocean waters are likely to increase metabolic rate in krill, possibly altering the amount of energy available for other important life-cycle processes, a finding directly related to future population dynamics and fisheries management.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 7
    Publication Date: 2022-07-25
    Description: The pelagic tunicate Salpa thompsoni is recognized as a major metazoan grazer in the Southern Ocean. Long term observations show an increase in this species’ biomass and a southward shift in its distribution both of which are positively correlated with ocean warming and winter sea ice decline around the Antarctic Peninsula. However, our understanding on how salps adapt their life cycle to the extreme seasonality of the Southern Ocean and the putative differences between its two reproductive forms (aggregates, solitaries) is rudimentary. In particular, our current knowledge of whether and how S. thompsoni overwinter is limited, largely due to winter sampling constraints. In this study, we investigated the form-specific gene expression profiles of Salpa thompsoni during the austral autumn and winter. Between the seasons, genes related to translation showed the biggest difference in gene expression. We found more genes were upregulated in solitaries compared to aggregates, indicating a potentially form-specific overwintering strategy. Our data provide first insights into the seasonal and form-specific physiology of salps by considering their complex life cycle, thereby contributing to a more comprehensive understanding of the response of salps to seasonal changes in their environment and to anthropogenic induced global climate change.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , NonPeerReviewed
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  • 8
    Publication Date: 2024-02-29
    Description: Salps have attracted attention as zooplankton organisms that may be able to expand their habitat range and increase their ecological importance in the face of ongoing global warming. Due to their gelatinous nature, unique feeding strategy, and reproductive ecology such changes could have profound impacts on regional marine ecosystems. While their role in the regional carbon cycle is receiving attention, our knowledge of their physiology and life cycle is still limited. This knowledge gap is mainly due to their fragile gelatinous nature, which makes it difficult to capture and maintain intact specimen in the laboratory. We present here a modified kreisel tank system that has been tested onboard a research vessel with the Southern Ocean salp Salpa thompsoni and at a research station with Salpa fusiformis and Thalia democratica from the Mediterranean Sea. Successful maintenance over days to weeks allowed us to obtain relative growth and developmental rates comparable to in situ field samples of S. thompsoni and S. fusiformis, and provided insights into previously unknown features of their life cycle (e.g., testes development). Our results show that traditional methods of estimating growth, such as cohort analysis, may lead to a general overestimation of growth rates and neglect individual strategies (e.g., shrinkage), which can affect the results and conclusions drawn from population dynamic models. By providing a starting point for the successful maintenance of different species, comparable experiments on the physiology of salps is made possible. This will contribute to refining model parameters and improving the reliability of the predictions.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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