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  • 1
    Publication Date: 2024-02-01
    Description: Snake venoms are complex mixtures of toxins that differ on interspecific (between species) \nand intraspecific (within species) levels. Whether venom variation within a group of closely related \nspecies is explained by the presence, absence and/or relative abundances of venom toxins remains \nlargely unknown. Taipans (Oxyuranus spp.) and brown snakes (Pseudonaja spp.) represent medically \nrelevant species of snakes across the Australasian region and provide an excellent model clade \nfor studying interspecific and intraspecific venom variation. Using liquid chromatography with \nultraviolet and mass spectrometry detection, we analyzed a total of 31 venoms covering all species of \nthis monophyletic clade, including widespread localities. Our results reveal major interspecific and \nintraspecific venom variation in Oxyuranus and Pseudonaja species, partially corresponding with their \ngeographical regions and phylogenetic relationships. This extensive venom variability is generated \nby a combination of the absence/presence and differential abundance of venom toxins. Our study \nhighlights that venom systems can be highly dynamical on the interspecific and intraspecific levels \nand underscores that the rapid toxin evolvability potentially causes major impacts on neglected \ntropical snakebites.
    Keywords: snake venom ; venom variation ; evolvability ; liquid chromatography ; mass spectrometry
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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  • 2
    Publication Date: 2024-04-18
    Description: This study provides a new methodology for the rapid analysis of numerous venom samples in an automated fashion. Here, we use LC-MS (Liquid Chromatography–Mass Spectrometry) for venom separation and toxin analysis at the accurate mass level combined with new in-house written bioinformatic scripts to obtain high-throughput results. This analytical methodology was validated using 31 venoms from all members of a monophyletic clade of Australian elapids: brown snakes (Pseudonaja spp.) and taipans (Oxyuranus spp.). In a previous study, we revealed extensive venom variation within this clade, but the data was manually processed and MS peaks were integrated into a time-consuming and labour-intensive approach. By comparing the manual approach to our new automated approach, we now present a faster and more efficient pipeline for analysing venom variation. Pooled venom separations with post-column toxin fractionations were performed for subsequent high-throughput venomics to obtain toxin IDs correlating to accurate masses for all fractionated toxins. This workflow adds another dimension to the field of venom analysis by providing opportunities to rapidly perform in-depth studies on venom variation. Our pipeline opens new possibilities for studying animal venoms as evolutionary model systems and investigating venom variation to aid in the development of better antivenoms.
    Keywords: LC-MS ; snake venom ; high throughput ; data analysis
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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