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  • 1
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Annals of the New York Academy of Sciences 696 (1993), S. 0 
    ISSN: 1749-6632
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Natural Sciences in General
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Perspectives in drug discovery and design 2 (1994), S. 103-126 
    ISSN: 1573-9023
    Keywords: Cyclosporin ; FK-506 ; Rapamycin ; Cyclophilin ; FKBP ; Calcineurin ; Immunosuppression ; T-cell activation ; NF-AT ; S6 kinase ; PI-3 ; kinase
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology
    Notes: Summary The immunosuppressants cyclosporin A, FK-506, and rapamycin prevent T-cell activation by inhibiting intermediate signal transduction steps. Studies have focused on their mechanisms of action, with the aim of both designing novel immunosuppressants and understanding signal transduction. Biochemical studies first identified the primary drug targets, the immunophilins cyclophilin and FKBP. Genetic studies in yeast demonstrated that the active agents in vivo are toxic protein-drug complexes. The target of cyclophilin-CsA and FKBP12-FK-506, the calcium- and calmodulin-regulated phosphatase calcineurin, regulates nuclear import of a T-cell-specific transcription factor during response to antigen. In yeast, calcineurin is required for recovery from pheromone-induced cell cycle arrest. The challenges ahead are to understand the normal cellular roles of the immunophilins, to biochemically define the direct target of the FKBP12-rapamycin complex, and to translate recent advances into the design of novel immunosuppressants.
    Type of Medium: Electronic Resource
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  • 3
    Publication Date: 2005-11-16
    Description: Despite ongoing success in the treatment of childhood acute lymphoblastic leukemia (ALL), patients harboring translocations involving the genetic locus 11q23 continue to have a poor prognosis. The majority of 11q23 translocations result in the formation of a functional fusion protein consisting of the N-terminus of MLL fused to the C-terminal portion of one of more than 30 fusion partners. This translocation results in a functional chimeric protein critical for leukemogenesis. Recently, our lab has identified an interaction between two common MLL fusion partners, AF4 and AF9. Through a series of mapping experiments we identified a small region of human AF4 to be sufficient for its interaction with AF9. Based on these studies, a synthetic peptide (PFWT) that mimics the AF9 binding site on AF4 was developed. Treatment of leukemia cells that express the MLL-AF4 protein with PFWT results in apoptosis with no observable affects on CD34+ hematopoietic stem cells, suggesting the AF9-AF4 interaction is a promising chemotherapeutic target. To improve upon the therapeutic potential of PFWT, we developed a high-throughput enzyme-linked colorimetric assay to identify peptidomimetics that block the AF9-AF4 interaction. A combinatorial peptide library was synthesized in which each position of the 10-mer sequence was substituted with either the α- or corresponding β-amino acid. β-Amino acids which are similar to α-amino acids but contain an additional carbon in their backbone were chosen because of their resistance to proteases (210= 1024 possible unique sequences). To date, 30 of the peptides screened compare favorably with PFWT for disrupting the AF4-AF9 interaction. Sequencing of the peptides by MS/MS revealed substitutions at the N- and C-terminal ends are well tolerated. In addition, peptides can incorporate as many as three β-amino acids and still retain biological activity. These data are important for establishing a sequence with improved pharmacokinetic properties as compared to PFWT and serve as the first step in our design towards an optimal peptide sequence for drug development. They also validate the utility of a high-throughput assay system for drug screening. Future studies for the identified peptides include determining their biological half-lives, AF9 binding affinities, and ability to induce apoptosis in leukemia cells.
    Print ISSN: 0006-4971
    Electronic ISSN: 1528-0020
    Topics: Biology , Medicine
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  • 4
    Publication Date: 2013-11-15
    Description: Mixed lineage leukemias are characterized by the creation of a chimeric fusion protein where MLL is fused in frame to over 60 different fusion partners, leading to the disruption of HOX gene regulation. AF9 is one of the most common MLL fusion partners, and MLL-AF9 leukemia is acute and aggressive with a poor overall prognosis. The mechanism by which AF9 regulates normal transcription and contributes to dysregulated transcription is poorly understood. We have shown that the C-terminal domain of AF9 binds to four different proteins, two of which (Dot1L – an H3K79 methyltransferase and AF4 – which recruits P-TEFb), are transcriptional activators, whereas the other two (CBX8 – which is a part of the PRC1 repressive complex and BCOR- BCL6 corepressor), are generally transcriptional repressors, suggesting that AF9 acts as a protein signaling hub. We have previously shown that the C-terminal domain of AF9 is an intrinsically disordered protein (IDP) meaning that it is unstructured on its own but undergoes coupled folding and binding upon interacting with its binding partners1. Our goal is to use structure-function studies to further understand AF9 protein interactions and to elucidate which of these interactions with AF9 are critical for MLL-AF9 leukemogenesis. We have determined NMR solution structures of complexes of Dot1L and CBX8 with AF9. Both Dot1L and CBX8 complexes form mixed alpha-beta structures, similar to that of our previously solved AF4-AF9 complex structure where AF4, Dot1L, and CBX8 all have a consensus LXVXIXL sequence and form a ß-strand and an extended ß-turn. Intriguingly, Dot1L contains three separate binding motifs for AF9 interaction, including one repeat motif separated by seven amino acids. Our 15N-1H HSQC NMR experiments show that each of these three binding sites on Dot1L adopts a similar fold with AF9 yet has vastly different binding affinities with AF9. We have created several structure-guided mutations on AF9 that differentially block interactions of its binding partners. A single charge reversal mutation on AF9 that blocks all protein interactions with AF9 was introduced into MLL-AF9 in vitro colony forming assays, and was able to abrogate the serial replating capacity of MLL-AF9. Other mutations that selectively block the interaction of various proteins with AF9, show differential effects in colony forming assays and HOX gene expression suggesting the importance of certain AF9 protein interactions in MLL-AF9 leukemogenesis. 1. Leach, B. I. et al. Leukemia fusion target AF9 is an intrinsically disordered transcriptional regulator that recruits multiple partners via coupled folding and binding. Structure21, 176-183, doi:10.1016/j.str.2012.11.011 (2013). Disclosures: No relevant conflicts of interest to declare.
    Print ISSN: 0006-4971
    Electronic ISSN: 1528-0020
    Topics: Biology , Medicine
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  • 5
    Publication Date: 2011-11-18
    Description: Abstract 3464 Mixed Lineage Leukemia (MLL) fusion proteins disrupt HOX gene regulation through recruitment of transcriptional elongation factors, leading to acute leukemia. AF9 is one of the most common MLL fusion partners and has roles in normal regulation of HOX genes. AF9 has also been shown to interact with multiple transcriptional regulators, including AF4 family proteins which recruit and activate P-TEFb, suggesting a pivotal role in regulation of transcriptional elongation at HOX loci. The mechanism by which AF9 regulates normal transcription and contributes to dysregulated transcription in MLL-AF9 leukemia is poorly understood. We have recently shown that the AF9 ANC1 Homology Domain (AHD), which is retained in MLL fusion proteins, is intrinsically disordered, i.e. it is unstructured on its own, and recruits AF4 family members by coupled folding and binding. In order to further understand this behavior, we have determined the solution structure of the AF9 AHD in complex with AF4 and identified a point mutation which selectively disrupts the AF4-AF9 interaction. Introduction of this mutation into MLL-AF9 results in loss of HOXA9 upregulation and loss of transformation of hematopoietic progenitor cells, establishing the importance of this interaction for MLL-AF9 leukemia. We propose that AF9 functions as a signaling hub which regulates transcriptional elongation by alternative recruitment of transcriptional regulators. Indeed, the AF9 ANC1 homology domain (AHD) has been shown to also bind the H3K79 methyltransferase Dot1L, human polycomb 3 (hPC3), and the BCL6 corepressor, necessitating a carefully orchestrated choreography of binding partners to regulate transcription. Intrinsic disorder may facilitate dynamic exchange between binding partners to mediate rapid changes of HOX gene expression in both normal tissues, as required for specific differentiation programs, and in leukemia. Our results also validate the AF9-AF4 interaction as a potential target for therapeutic development. Disclosures: No relevant conflicts of interest to declare.
    Print ISSN: 0006-4971
    Electronic ISSN: 1528-0020
    Topics: Biology , Medicine
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  • 6
    Publication Date: 2008-11-16
    Description: More than 50% of infants with ALL have leukemic blast cells that contain MLL fusion genes with reciprocal translocation t(4;11)(q21;q23). We have shown that AF4 and AF9 form a stable protein complex in the nucleus and that the mutual interaction domains of the two proteins are present within MLL fusion proteins (Erfurth et al., 2004). Mapping of the protein interaction domains reveals that a small, highly conserved portion of the AF4 molecule is necessary and sufficient to bind AF9. To test the significance of the AF4-AF9 protein interaction, we developed small synthetic peptides capable of interfering with AF4-AF9 binding in vitro. The peptides mimic the amino acid sequence of the AF9 binding domain within AF4 and compete with AF4 to block AF9 binding. We have shown that the synthetic peptide PFWT (P=Penetratin linked to FWT=LWVKIDLDLLSR) disrupts AF4-AF9 protein complexes and kills t(4;11) MV4;11 cells but not MOLT-4 leukemia cells or healthy CD34+ cells in vitro (Srinivasan et al., 2004). We are now developing new strategies for the use of MSC as an alternative to deliver recombinant FWT peptide directly to leukemia cells in an artificial local microrenvironment in vitro. In these new studies we designed HIV-1 based lentiviral vectors encoding FWT peptide (NL-FLAGHA2-FWT-9R) and CXCL12/FWT (NL-CXCL12-FCS-FLAG-HA2-FWT-9R) and examined whether recombinant peptide produced by modified MSC, modulate cell cycle and the growth kinetics of leukemic cells with t(4;11) translocation in vitro. Co-culture systems that promote direct cell-to-cell contact were first established with untransduced MSC or MSC modified to produce recombinant FWT and seeded with MV4;11 leukemia cells (1:1 ratio). MSC transduced with Lentiviral-Control vectors showed 2.8% killing of MV4;11 leukemia cells. The addition of suboptimal concentrations, 5μg/ml, synthetic PFWT peptide, caused 17.4% killing of MV4;11 leukemia cells. Recombinant FWT peptide produced endogenously by FWT-MSC also showed 19.5% killing. When suboptimal concentrations, 5 μg/ml synthetic PFWT peptide was added back to these co-cultures containing FWT-MSC, MV4;11 leukemia cell killing was further markedly enhanced 〉10 fold to 44% showing more than an addetive effect by synthetic PFWT peptide and endogenous recombinant FWT. Endogenous FWT produced by CXCL112/FWT MSC was also able to kill 20% of MV4;11 leukemia cells in the absence of PFWT synthetic peptide. Co-culture studies utilizing the control MOLT-4 leukemia cells that lack the t(4;11) translocation indicated that endogenous FWT produced by FWT transduced MSC or CXCL12/FWT transduced MSC, alone, or with additional 5μg/ml or 25μg/ml synthetic PFWT peptide, showed no significant killing of MOLT-4 leukemia cells. In summary, we have shown that FWT recombinant peptide is synthesized and released from MSC transduced with lentiviral vectors, NL-FLAG-HA2-FWT-9R or NL-CXCL12-FCS-FLAG-HA2-FWT-9R. The data demonstrate sufficient transfer of recombinant FWT peptide from both types of FWT-transduced MSCs to kill leukemic cells in vitro.These studies support the further development of MSC-mediated delivery of recombinant cytotoxic peptides to target leukemia.
    Print ISSN: 0006-4971
    Electronic ISSN: 1528-0020
    Topics: Biology , Medicine
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  • 7
    Publication Date: 2013-07-25
    Print ISSN: 0014-5793
    Electronic ISSN: 1873-3468
    Topics: Biology , Chemistry and Pharmacology
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  • 8
  • 9
    Publication Date: 1999-03-01
    Print ISSN: 0003-2697
    Electronic ISSN: 1096-0309
    Topics: Biology , Chemistry and Pharmacology
    Published by Elsevier
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  • 10
    Publication Date: 2000-01-01
    Print ISSN: 0378-1119
    Electronic ISSN: 1879-0038
    Topics: Biology
    Published by Elsevier
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