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  • Phytoplankton  (2)
  • Plankton  (2)
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  • 1
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Remote Sensing of Environment 135 (2013): 77-91, doi:10.1016/j.rse.2013.03.025.
    Description: Photosynthetic production of organic matter by microscopic oceanic phytoplankton fuels ocean ecosystems and contributes roughly half of the Earth's net primary production. For 13 years, the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) mission provided the first consistent, synoptic observations of global ocean ecosystems. Changes in the surface chlorophyll concentration, the primary biological property retrieved from SeaWiFS, have traditionally been used as a metric for phytoplankton abundance and its distribution largely reflects patterns in vertical nutrient transport. On regional to global scales, chlorophyll concentrations covary with sea surface temperature (SST) because SST changes reflect light and nutrient conditions. However, the ocean may be too complex to be well characterized using a single index such as the chlorophyll concentration. A semi-analytical bio-optical algorithm is used to help interpret regional to global SeaWiFS chlorophyll observations from using three independent, well-validated ocean color data products; the chlorophyll a concentration, absorption by CDM and particulate backscattering. First, we show that observed long-term, global-scale trends in standard chlorophyll retrievals are likely compromised by coincident changes in CDM. Second, we partition the chlorophyll signal into a component due to phytoplankton biomass changes and a component caused by physiological adjustments in intracellular chlorophyll concentrations to changes in mixed layer light levels. We show that biomass changes dominate chlorophyll signals for the high latitude seas and where persistent vertical upwelling is known to occur, while physiological processes dominate chlorophyll variability over much of the tropical and subtropical oceans. The SeaWiFS data set demonstrates complexity in the interpretation of changes in regional to global phytoplankton distributions and illustrates limitations for the assessment of phytoplankton dynamics using chlorophyll retrievals alone.
    Description: The authors would like to acknowledge the NASA Ocean Biology and Biogeochemistry program for its long-term support of satellite ocean color research and the Orbital Sciences Corporation and GeoEye who were responsible for the launch, satellite integration and on-orbit management the SeaWiFS mission.
    Keywords: Ocean color ; SeaWiFS ; Phytoplankton ; Colored dissolved organic matter ; Decadal trends
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 2
    Publication Date: 2022-05-25
    Description: Author Posting. © American Geophysical Union, 2013. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Global Biogeochemical Cycles 27 (2013): 526–540, doi:10.1002/gbc.20050.
    Description: Satellite measurements allow global assessments of phytoplankton concentrations and, from observed temporal changes in biomass, direct access to net biomass accumulation rates (r). For the subarctic Atlantic basin, analysis of annual cycles in r reveals that initiation of the annual blooming phase does not occur in spring after stratification surpasses a critical threshold but rather occurs in early winter when growth conditions for phytoplankton are deteriorating. This finding has been confirmed with in situ profiling float data. The objective of the current study was to test whether satellite-based annual cycles in r are reproduced by the Biogeochemical Element Cycling–Community Climate System Model and, if so, to use the additional ecosystem properties resolved by the model to better understand factors controlling phytoplankton blooms. We find that the model gives a similar early onset time for the blooming phase, that this initiation is largely due to the physical disruption of phytoplankton-grazer interactions during mixed layer deepening, and that parallel increases in phytoplankton-specific division and loss rates during spring maintain the subtle disruption in food web equilibrium that ultimately yields the spring bloom climax. The link between winter mixing and bloom dynamics is illustrated by contrasting annual plankton cycles between regions with deeper and shallower mixing. We show that maximum water column inventories of phytoplankton vary in proportion to maximum winter mixing depth, implying that future reductions in winter mixing may dampen plankton cycles in the subarctic Atlantic. We propose that ecosystem disturbance-recovery sequences are a unifying property of global ocean plankton blooms.
    Description: This work was supported by the National Aeronautics and Space Administration, Ocean Biology and Biogeochemistry Program (grants NNX10AT70G, NNX09AK30G, NNX08AK70G, NNX07AL80G, and NNX08AP36A) and the Center for Microbial Oceanography Research and Education (C-MORE; grant EF-0424599), a National Science Foundation-supported Science and Technology Center.
    Keywords: Phytoplankton ; Bloom ; Atlantic ; Satellite ; Model ; Ecosystems
    Repository Name: Woods Hole Open Access Server
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  • 3
    Publication Date: 2022-05-25
    Description: Author Posting. © John Wiley & Sons, 2009. This is the author's version of the work. It is posted here by permission of John Wiley & Sons for personal use, not for redistribution. The definitive version was published in Marine Ecology 30 (2009): 133-150, doi:10.1111/j.1439-0485.2009.00288.x.
    Description: Climate change will alter turbulence intensity, motivating greater attention to mechanisms of turbulence effects on organisms. Many analytic and analog models used to simulate and assess effects of turbulence on plankton rely on a one-dimensional simplification of the dissipative scales of turbulence, i.e., simple, steady, uniaxial shears, as produced in Couette vessels. There shear rates are constant and spatially uniform, and hence so is vorticity. Studies in such Couette flows have greatly informed, spotlighting stable orientations of nonspherical particles and predictable, periodic, rotational motions of steadily sheared particles in Jeffery orbits that steepen concentration gradients around nutrient-absorbing phytoplankton and other chemically (re)active particles. Over the last decade, however, turbulence research within fluid dynamics has focused on the structure of dissipative vortices in space and time and on spatially and temporally varying 2 vorticity fields in particular. Because steadily and spatially uniformly sheared flows are exceptional, so therefore are stable orientations for particles in turbulent flows. Vorticity gradients, finite net diffusion of vorticity and small radii of curvature of streamlines are ubiquitous features of turbulent vortices at dissipation scales that are explicitly excluded from simple, steady Couette flows. All of these flow components contribute instabilities that cause rotational motions of particles and so are important to simulate in future laboratory devices designed to assess effects of turbulence on nutrient uptake, particle coagulation and predatorprey encounter in the plankton. The Burgers vortex retains these signature features of turbulence and provides a simplified “cartoon” of vortex structure and dynamics that nevertheless obeys the Navier-Stokes equations. Moreover, this idealization closely resembles many dissipative vortices observed in both the laboratory and the field as well as in direct numerical simulations of turbulence. It is simple enough to allow both simulation in numerical models and fabrication of analog devices that selectively reproduce its features. Exercise of such numerical and analog models promises additional insights into mechanisms of turbulence effects on passive trajectories and local accumulations of both living and nonliving particles, into solute exchange with living and nonliving particles and into more subtle influences on sensory processes and swimming trajectories of plankton, including demersal organisms and settling larvae in turbulent bottom boundary layers. The literature on biological consequences of vortical turbulence has focused primarily on the smallest, Kolmogorov-scale vortices of length scale η. Theoretical dissipation spectra and direct numerical simulation, however, indicate that typical dissipative vortices with radii of 7η to 8η, peak azimuthal speeds of order 1 cm s-1 and lifetimes of order 10 s as a minimum (and much longer for moderate pelagic turbulence intensities) deserve new attention in studies of biological effects of turbulence.
    Description: This research was supported by collaborative U.S. National Science Foundation grant (OCE- 0724744) to Jumars and Karp-Boss.
    Keywords: Plankton ; Shear ; Turbulence ; Vortex ; Vorticity
    Repository Name: Woods Hole Open Access Server
    Type: Preprint
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  • 4
    Publication Date: 2022-12-06
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Boss, E., Waite, A., Karstensen, J., Trull, T., Muller-Karger, F., Sosik, H., Uitz, J., Acinas, S., Fennel, K., Berman-Frank, I., Thomalla, S., Yamazaki, H., Batten, S., Gregori, G., Richardson, A., & Wanninkhof, R. Recommendations for plankton measurements on OceanSITES moorings with relevance to other observing sites. Frontiers in Marine Science, 9, (2022): 929436, https://doi.org/10.3389/fmars.2022.929436.
    Description: Measuring plankton and associated variables as part of ocean time-series stations has the potential to revolutionize our understanding of ocean biology and ecology and their ties to ocean biogeochemistry. It will open temporal scales (e.g., resolving diel cycles) not typically sampled as a function of depth. In this review we motivate the addition of biological measurements to time-series sites by detailing science questions they could help address, reviewing existing technology that could be deployed, and providing examples of time-series sites already deploying some of those technologies. We consider here the opportunities that exist through global coordination within the OceanSITES network for long-term (climate) time series station in the open ocean. Especially with respect to data management, global solutions are needed as these are critical to maximize the utility of such data. We conclude by providing recommendations for an implementation plan.
    Description: This work was partially supported from funding to SCOR WG 154 (P-OBS) provided by national committees of the Scientific Committee on Oceanic Research (SCOR) and from a grant to SCOR from the U.S. National Science Foundation (OCE-1840868). FM-K acknowledges the support provided for participation by the Marine Biodiversity Observation Network (MBON) sponsored by NASA, NOAA, ONR, BOEM. HS acknowledges support from the Simons Foundation.
    Keywords: Plankton ; Ocean ; Measurements ; Sensors ; OceanSITES ; Ocean biology
    Repository Name: Woods Hole Open Access Server
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