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  • Articles  (1,580)
  • Organic Chemistry  (714)
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  • Atomic, Molecular and Optical Physics  (291)
  • 1980-1984  (1,580)
  • 1981  (1,580)
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  • Articles  (1,580)
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  • 1980-1984  (1,580)
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  • 1
    ISSN: 0886-1544
    Keywords: videomicroscopy ; differential interference microscopy ; streaming ; reticulopodial motility ; Allogromia ; microtubules ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: A new method called Allen Video-enhanced Contrast, Differential Interference Contrast (AVEC-DIC) microscopy is shown to be sufficiently sensitive to detect several new features of microtubule-related motility in the reticulopodial network of the foraminifer, Allogromia. The method takes advantage of the variable gain and offset features of a binary video camera to operate the DIC microscope under conditions highly favorable for video imaging, but in which the optical image is virtually invisible to the eye yet retains its full information when viewed by a suitable video camera. The improvements are made possible by setting a dé Senarmont compensator to λ/9-λ/4 at maximal working aperture of internally corrected planapochromatic objectives. Under these conditions, the offset feature of the video camera can reject so much stray light from the instrument and specimen that contrast compares favorably with that observed in high-extinction images, and polarizing rectifiers offer scarcely any advantage. Freed from the constraints of the light-limited conditions of DIC microscopy, video images can be recorded 60 times per second, or over 1,000 times the rate of photomicrographs at comparable magnifications under high-extinction conditions.Application of this method to the reticulopodial network of Allogromia has shown that cytoplasmic organelles are translocated only in contact with single microtubules or bundles of microtubules, and that these organelles fail to move when separated from microtubules. Microtubules themselves undergo both axial translatory (“sliding”) and lateral “zipping and unzipping” movements that have been suggested to occur during mitosis and other biological processes.
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  • 2
    Electronic Resource
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    Cell Motility and the Cytoskeleton 1 (1981), S. 329-347 
    ISSN: 0886-1544
    Keywords: actin ; microfilaments ; heavy meromyosin ; mammary gland ; secretion ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Cytochalasin B, a microfilament-altering drug, inhibits lactose synthesis in lactating guinea pig mammary gland [Biochim. Biophys. Acta 392:20, 1975] but not primarily by inhibiting glucose transport [Eur. J. Cell Biol. 20:150, 1979]. In order to study the possible role of microfilaments in lactose synthesis and secretion, we isolated both the alveolar (milk-secreting) and myoepithelial (contractile) cells from lactating mammary gland. Light microscopy shows that the alveolar cell fraction (viability approximately 71%) is homogenous and that the cells retain strong polarity of secretory structures in the apical region. Two proteins were extracted from the alveolar cell fraction. One (mol wt 42,000) comigrates with skeletal muscle actin on SDS-PAGE gels. The other, a high-molecular-weight (180,000) protein (HMWP) may be analogous to actin-binding protein or clathrin. An extract from the myoepithelial cell fraction also contains a protein that comigrates with actin but no HMWP. Whole tissue extract contains the 42K protein, and a 185K HMWP. Examination of the alveolar cell extract by electron microscopic (EM) negative staining revealed meshworks of multistranded, interconnecting filaments, with attached globular structures (100-200 A) (possibly the HMWP) and single filaments (40-60 A diameter) branching off. To localize these filamentous structures in situ, whole tissue was glycerinated and incubated with rabbit skeletal muscle heavy meromyosin (HMM). Masses of filaments in myoepithelial cells served as convenient standards for HMM decoration. Decorated filaments have cross-arms or projections, unlike the narrow, smooth filaments of control tissue. Decorated filaments in alveolar cells are located beneath the plasma membrane, in close association with secretory vacuoles, and near the Golgi apparatus; filaments near the latter two are often oriented perpendicular to the plasma membrane. Microvesicles are embedded in meshworks under the plasmalemma and near the Golgi apparatus. Intermediate-sized (85-115 A diameter), non-decorated filaments diverge from the meshworks of decorated filaments. Microvesicles are associated with intermediate-sized filaments as well. The association of actin-like filaments with secretory vacuoles and microvesicles and their location in areas of the cell concerned with biosynthetic activities suggest a possible function in the intracellular transport of secretory products.
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  • 3
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    Cell Motility and the Cytoskeleton 1 (1981), S. 455-468 
    ISSN: 0886-1544
    Keywords: intercellular bridge ; intercellular communication ; cytokinesis ; squid ; ultrastructure ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Incomplete cytokinesis followed by the disappearance of the midbody and spindle remnant results in intercellular bridges between the cells of the blastoderm of the squid embryo. An electron microscope study of the morphology of the stages of development of the intercellular bridge is presented. Cytokinesis ceased as the furrow base reached a diameter slightly larger than the midbody. As furrowing stopped, a dense material accumulated to form a cylindrical sheath 50 nm thick, lining the inner surface of the furrow base. Proteolytic enzymes showed this material to have a significant protein component. As the midbody broke down, vesicles lined the inner surface of the bridge sheath. In this configuration, there was cyto-plasmic continuity between the cells, and organelles appeared to pass through the bridge.The intercellular bridge could become temporarily closed. Vesicles entered the channel and fused with the vesicles lining the inner surface of the sheath. The vesicles enlarged until the channel became occluded with a series of transverse cisternae, the edges of which were embedded in the material of the sheath. When the bridge reopened, the transverse cisterna appeared to dissociate from the sheath, move out of the channel, and break down. Occasionally bridges were seen in which the bridge wall appeared distorted into lobes. It is suggested that such bridges might be in the porcess of breaking down, resulting in the final separation of the cells.
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  • 4
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    Cell Motility and the Cytoskeleton 1 (1981), S. 469-483 
    ISSN: 0886-1544
    Keywords: microtubules ; nucleation ; mitosis ; nocodazole ; immunocytochemistry ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: The reassembly of microtubules is described in mitotic cells after release from nocodazole-induced block. The formation of microtubules was followed by light microscopic immunocytochemical staining using the PAP method, combined with to-luidine blue staining of the chromatin. The light microscopic observations on whole cells were compared with ultrastructural observations on thin sections. This step is essential to ascertain complete destruction of microtubules during the nocodazole treatment and to correlate immunocytochemical staining with the presence of microtubules.Removal of nocodazole (10 or 1 μg/ml) after a sufficiently long incubation to induce a complete disappearance of microtubules resulted in the appearance of tubulin staining specifically associated with the centromeres and with one or two isolated points in the cytoplasm. Electron microscopy confirmed that the staining was due to the massive accumulation of small microtubules at the kinetochores and centrosomes. Kinetochore nucleation was seen only in association with condensed metaphase-stage chromosomes and not with the less-condensed prophase chromosomes.In a second type of experiment cells were allowed to enter mitosis in the presence of an incompletely active concentration of nocodazole (0.1 μg/ml). The construction of the mitotic spindle was arrested; however, short microtubules were assembled at the kinetochores and centrosomes.These experiments demonstrate that in living mitotic PTK2 cells the kinetochores, as well as the centrosomes, exert a nucleating action on tubulin assembly.The further elongation of microtubules after removal of nocodazole was seen to occur preferentially along axes between the centrosomes and the kinetochores. This resulted in the construction of normal metaphases that evolved through anaphase and telophase. We have attempted to formulate a hypothesis that may explain the oriented assembly that seems to be essential in the construction of the spindle.
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  • 5
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    Cell Motility and the Cytoskeleton 1 (1981), S. 485-497 
    ISSN: 0886-1544
    Keywords: actin ; tubulin ; nucleotides ; polymerization ; microfilaments ; microtubules ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Both actin and tubulin, the major proteins of the cytoskeleton, bind nucleotide triphosphate (NTP) and exhibit the phenomenon of “polymerization-coupled” NTP hydrolysis. In this report I review the nature of polymerization-coupled NTP hydrolysis, and its possible role in the cellular function of actin and tubulin. Polymerization-coupled hydrolysis may be viewed as simply reflecting differences in the NTPase activity of free subunit as compared to polymer. Making assumptions concerning the values of various rate constants, it is possible to write expressions for the effects of NTP hydrolysis on the kinetics of polymerization. The role of NTP hydrolysis may be viewed in at least three different ways: (1) Hydrolysis alters the kinetics of assembly and disassembly. This leads to a consideration of the role of subunit flow in microtubule and microfilament function. (2) Hydrolysis is an essentially irreversible step that separates the assembly and disassembly reactions. This suggests a role of NTP in the regulation of polymer content during cellular cycles of assembly and disassembly. (3) NTP may allow transient stabilization of intersubunit bonds. This suggests a role of NTP in nucleation and possible regulation of nonequilibrium states of assembly.
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  • 6
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    Cell Motility and the Cytoskeleton 1 (1981), S. 499-515 
    ISSN: 0886-1544
    Keywords: dynein ; tubulin ; axonemes ; microtubules ; microtubule-associated proteins ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Microtubule-associated proteins (MAPs), isolated from brain tubulin, bound to and saturated outer fibers of Chlamydomonas flagella. MAPs present on these microtubules prevented the subsequent recombination of dynein. MAPs also bound to intact axonemes and thus did not specifically bind to the dynein binding sites on the A subfiber. A molar ratio of 1 mole MAP2 per 27 moles tubulin dimers at saturation of the outer fibers with MAP2 suggested that MAPs could effectively interfere with dynein recombination only if the MAPs were near the dynein binding sites to sterically prevent binding. However, electron microscopic observations indicated that MAPs were not localized but, instead, were dispersed around the outer fibers. In addition, MAP2 present at saturating amounts on in vitro assembled brain microtubules had no significant effect on dynein binding. Dynein-decorated microtubules contained clusters of arms suggesting that there may be cooperative interaction between the arms during dynein binding. Because the A subfiber of axonemes contains sites to which dynein preferentially attaches, MAPs may prevent recombination by interfering with cooperative binding to these specific sites. Dynein presumably binds with equal affinity to any protofilament on in vitro assembled microtubules, and, therefore, the MAPs may not be capable of effectively interfering with cooperative binding of dynein to these microtubules.
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  • 7
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    Cell Motility and the Cytoskeleton 1 (1981), S. 167-178 
    ISSN: 0886-1544
    Keywords: nerve growth ; actin ; tubulin ; antibodies ; immunofluorescence ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Embryonic chick nerve cells, from dissociated dorsal root ganglia, were cultured on polylysine substrata and examined for tubulin and actin distribution by indirect immunofluorescence.Antibodies generated against chick brain tubulin produced specific fluorescence in growth cones, neurites, and cell bodies without revealing distribution differences or substructure in the nerve cells. However, at reduced antitubulin concentrations, differences were resolved. Tubulin fluorescence remained uniform and intense in neurites and cell bodies, but exhibited reduced intensity and patterning in growth cones. Nonneuronal cells in the reduced intensity and patterning in growth cones. Nonneuronal cells in the cultures served as controls for typical cytoplasmic tubulin fluorescence distribution. Straining controls demonstrated that fluorescence resulted from tubulin-antitubulin binding.Analogous studies, using antibodies generated against chick brain actin, demonstrated distribution differences at reduced antiactin concentrations, including “hot spots” of intense fluorescence in growth cones and a paucity of fluorescence in neurites.
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  • 8
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    Cell Motility and the Cytoskeleton 1 (1981), S. 237-245 
    ISSN: 0886-1544
    Keywords: centrioles ; symmetry ; triplet blades ; thermal fluctuations ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: The paper suggests several principles of construction of a microscopically small device for locating the directions of signal sources in microscopic dimensions. It appears that the simplest and smallest device that is compatible with the scrambling influence of thermal fluctuations as are demonstrated by Brownian motion is a pair of cylinders oriented at right angles to each other. Nine equally spaced blades run in a pitched fashion along the mantle of each cylinder. The blades have a concave cross-section and bend around the circumference of the cylinder in a certain rotational pattern. Considering the striking similarity of this hypothetical device with centrioles, the paper puts forward the conjecture that centrioles locate the direction of hypothetical signals inside cells.
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  • 9
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    Cell Motility and the Cytoskeleton 1 (1981), S. 247-260 
    ISSN: 0886-1544
    Keywords: cilia ; trachea ; ATP-reactivation ; ciliary activity ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Evidence for active sliding of microtubules during ciliary activity has been demonstrated in a number of organisms: sea urchin sperm flagella, protozoan cilia, and mollusc gill cilia. Although there is evidence that active sliding also occurs in mammalian sperm flagella, there is little or no information on whether active sliding of microtubules also occurs in the short (5-μm) cilia of the mammalian trachea or oviduct. Since these cilia are important in tracheobronchial clearance and ovum transport, respectively, it has been important to demonstrate that microtubule sliding is also involved in the activity of somatic cilia. Ciliated apical portions (cortices) and cilia were isolated from rabbit trachea and oviduct, using Triton X-100 to demembranate the cilia. Most of the ciliated cortices reactivated upon addition of ATP, whereas isolated cilia reactivated to a lesser extent. When preparations of cilia were digested with trypsin before or after ATP addition, disintegration of axonemal doublets occurred with about the same frequency as reactivation. These events were recorded using Nomarski optics and dark-field microscopy. When isolated cilia which had been digested by trypsin and exposed to ATP were also prepared for electron microscopy by negative staining, telescoping of doublet microtubules from axonemes could be shown. These results demonstrate that mammalian somatic ciliary doublet microtubules actively slide in a manner similar to that described for invertebrate cilia.
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  • 10
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    Cell Motility and the Cytoskeleton 1 (1981), S. 269-272 
    ISSN: 0886-1544
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
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  • 11
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    Cell Motility and the Cytoskeleton 1 (1981), S. 261-268 
    ISSN: 0886-1544
    Keywords: Tetrahymena ; chemotaxis ; temporal-gradient sensing ; modulation of turning frequency ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: The motility pattern of Tetrahymena thermophila in a homogeneous attractant field consists of successive “runs” and “turns.” The turning frequency decreases or increases upon an abrupt increase in attractant or repellent concentration, respectively. The dose-response curve for leucine and methionine yields a saturation curve with half maximum modulation of the turning frequency at a concentration of 15 μM and 2 μM, respectively. The turning frequency is modulated at a threshold concentration of 0.02 μM and 0.50 μM for leucine and methionine, respectively. The decrease (increase) in turning frequency in the presence of an attractant (repellent) jump reverts to prestimulus frequency in a time proportional to the concentration jump. Hence, Tetrahymena seem to employ temporal-gradient sensing for chemotaxis. Spatial-gradient taxis is thus exerted by random walk, which is biased in the direction of the gradient.
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  • 12
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    Cell Motility and the Cytoskeleton 1 (1981), S. 273-273 
    ISSN: 0886-1544
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
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  • 13
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    Cell Motility and the Cytoskeleton 1 (1981) 
    ISSN: 0886-1544
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
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  • 14
    ISSN: 0886-1544
    Keywords: videomicroscopy ; polarization microscopy ; streaming ; reticulopodial motility ; Allogromia ; microtubules ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: A new method is described for recording rapid processes of cell motility in polarized light. The Allen video-enhanced contrast (AVEC-POL) method of polarization microscopy achieves significant improvements in resolution, contrast, and the visibility of fine detail by a combination of novel adjustments to a standard (unrectified) polarizing microscope and video camera. Using the full working aperture of a high-power planapochromatic objective lens and compensator setting of λ/9-λ/4, visible images appear lacking in contrast. However, the same images viewed with an appropriate video camera equipped with an electronic offset adjustment can be made to appear with as much contrast as desired, revealing a significantly greater amount of fine detail in the image than can be seen by high extinction visual microscopy alone. At bias retardations between one-ninth and one-quarter wave, the diffraction anomaly observed near extinction disappears. Consequently, polarizing rectifiers are not required with the AVEC-POL method, and images previously requiring photographic exposures of around 20 seconds are sufficiently bright to be registered on the video monitor in 1/60 second. Using an intensity monitor, quantitative measurements of cellular birefringence can be retrieved from live or videotaped images displaying a linear relationship between contrast and phase retardation due to birefringence. The AVEC-POL method also renders accessible to polarized light analysis a number of objects that scatter or depolarize too much light to be studied by high extinction methods. The method is demonstrated on model objects and applied to the highly motile reticulopodial network of Allogromia laticollaris. Rapid motion in close association with microtubules can now be analyzed in greater detail at a significant reduction in the cost of recording.
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  • 15
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    Cell Motility and the Cytoskeleton 1 (1981), S. 303-327 
    ISSN: 0886-1544
    Keywords: cilia ; microtubules ; ATPase ; vanadate ; geometry of sliding ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: A dynein arm attachment cycle produces sliding between adjacent doublet microtubules (N and N + 1) of cilia. In intact axonemes, in the absence of ATP, almost all arms appear attached at both ends (rigor). When ATP is added, most arms detach from doublet N + 1. In ATP and vanadate, the arms do not return to rigor, suggesting that ATP hydrolysis is required for re-extension and reattachment of the dynein arm, but not for detachment. Using solutions containing dynein to decorate dynein-less axonemal doublets, we confirm this interpretation. In the absence of ATP, both sides of each doublet decorate with arms. Addition of ATP, ATP and vanadate or AMP-PNP causes immediate arm detachment, but only in the first instance, where extensive ATP hydrolysis can occur, does decoration eventually reappear. Dynein decorates heterologous axonemal doublets and brain microtubules, as well as homologous doublets, suggesting that this mechanochemical cycle may have general applicability in microtubule-based cell motility.
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  • 16
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    Cell Motility and the Cytoskeleton 1 (1981), S. 433-443 
    ISSN: 0886-1544
    Keywords: Physarum ; acellular slime mold ; calcium ion ; calcium-ionophore ; cytoplasmic contraction ; oscillation ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Calcium is now generally thought to play a key role in regulating a variety of cellular movements. When the plasmodium of Physarum polycephalum was treated with the calcium-ionophore A23187 or the quasi-ionophore amphotericin B, Ca2+ leaked out. Ca2+ efflux into the ambient solution from the plasmodial strand segment was measured by the luminescence of a photoprotein aequorin, and the tensile force production was recorded simultaneously. Ca2+ efflux oscillated with the same period as the cycle of tension generation in the strand, but the phase of cyclic changes in Ca2+ efflux was opposite to that of tension generation. That is, Ca2+ efflux fell in the increasing tension phase and rose in the decreasing tension phase. Cyclic changes in efflux of Ca2+ are provisionally interpreted as reflecting corresponding changes in concentrations of free Ca2+ in the cytoplasm.
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  • 17
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    Cell Motility and the Cytoskeleton 1 (1981), S. 445-454 
    ISSN: 0886-1544
    Keywords: taxol ; microtubules ; polymerization ; tubulin ; mitotic inhibitor ; protein self-assembly ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Dissociated bovine brain microtubule protein has been shown to reassemble at 0°C in the presence of the drug taxol. Tubulin polymerization was monitored both by electron microscopy of the polymeric structures and by incorporation of tritiated GTP into filterable polymeric structures. Most of the labeled guanine nucleotide uptake into tubulin polymeric structures occurred in the first 30 minutes of incubation with the drug. The initial polymerization event results in the formation of protofilamentous tubulin ribbons. The first microtubules were noted after 1 hour of incubation with the drug. After 20 hours of incubation at 0°C with taxol, the bulk of the polymerized tubulin appeared to be in the form of microtubules. Cold-stable tubulin rings with a mean diameter of 34 nm were present in the reaction mixture before the addition of taxol and throughout the 20-hour incubation. Most of the rings were apparantly not involved in the taxol-induced microtubule assembly. The results are consistant with a model whereby taxol induces an initial formation of protofilamentous ribbon structures, mostly from free tubulin dimers, and a slower subsequent folding of the ribbon structures into microtubules.
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  • 18
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    Cell Motility and the Cytoskeleton 1 (1981), S. 179-192 
    ISSN: 0886-1544
    Keywords: actin ; echinoderm ; fascin ; filopodia ; actin cross-linking protein ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Echinoderm coelomocytes transform from petaloid cells with large motile lamellipodia to filopodial forms. During this morphological transformation, actin filaments extensively reorganize from a random meshwork into tight bundles, which become the skeletons or cores of the filopodia. Antibody localization procedures show that fascin, a 58,000 dalton actin cross-linking protein, becomes incorporated into the filament bundles as they form. Isolated filopodial cores have a pronounced transverse striping pattern, which has been previously identified with fascin crosslinks, and gel electrophoresis identifies a protein in the cores that co-migrates with purified egg fascin. A few of the core fragments also have a distinctive “cap,” which we presume is the membrane insertion site for actin filaments.We have developed a radioimmunoassay for fascin and have used it to study the redistribution of this protein during transformation. Data from the assay indicate that fascin constitutes about 5% of the total cell protein and that substantially more fascin, approximately 1.5-2 times more, is found in the Triton-insoluble cytoskeletons of the filopodial cells than in the petaloid cells. Actin, measured by the DNAase I inhibition assay accounts for approximately 10% of the total cell protein. Approximately 65% of this actin is in a soluble non-filamentous form in the petaloid cells. Our results show that actin polymerization must occur during the cell shape change, since we find approximately 25% more actin in the filopodial cytoskeleton than in the petaloid cytoskeleton. The results show a preferential incorporation of fascin into the cytoskeleton as the cells form filopodia.
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  • 19
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    Cell Motility and the Cytoskeleton 1 (1981), S. 193-203 
    ISSN: 0886-1544
    Keywords: polygonal network ; rat aortic smooth muscle cell ; cell culture ; electron microscopy ; amino acid analysis ; elastin ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Cultured rat aortic smooth muscle cells (SMC) were examined by electron microscopy and found to contain polygonal networks of 75 A° thin myofilament bundles. The cells also had large bundles of longitudinally aligned thin myofilaments with periodically spaced dense bodies. Abundant plasmalemmal vesicles were present at the cell periphery, and the cells were connected by desmosomes. Intercellular spaces contained sparse amounts of elastic fibers, a material generally present in SMC cultures. Analyses of amino acids by automated column-chromatography showed that isodesmosine and desmosine, two amino acid residues unique for elastin, were present. Accordingly, it was concluded that polygonal networks, previously detected solely in cultured nonmuscle cells, were present in SMC.Other findings suggest (1) a change in myofilament arrangement takes place during cell migration, and (2) rat aortic SMC grown in tissue culture flasks is an important experimental tool in the study of cell motility since such myofilament rearrangements were observed to occur up to fourteen days in first passage.
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  • 20
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    Cell Motility and the Cytoskeleton 1 (1981), S. 205-235 
    ISSN: 0886-1544
    Keywords: capping of receptors ; cell locomotion ; cell-surface interactions ; frictional force ; membrane flow ; polymorphonuclear leukocytes ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: As a cell moves over a surface, the distribution of membrane proteins that adhere to the surface will be changed relative to the distribution of these molecules on a static cell. Observations of this redistribution offer, in principle, evidence as to the mechanisms of membrane dynamics during cell locomotion. Toward extracting such information we present and analyze a mathematical model of receptor transport in the membrane by diffusion and convection, as affected by the making and breaking of the bonds between the receptors and the surface as the cell moves.We show that the disruption of receptor-surface bonds at the tail of the cell provides a mechanism by which the frictional force opposing a cell's motion is exerted, and calculate the magnitude of this force as a function of cell velocity. Assuming this to be the major contribution to the frictional force, we show that when the shear force on a cell is above a critical value it is no longer possible for the cell to slide across the surface. For such large forces, it is still possible for the cell to roll; alternatively the cell can be torn free of the surface.Our analysis of existing data on movement of polymorphonuclear leukocytes indicates that cell motion is not accompanied by a bulk flow of membrane from the front to the back of the cell. The data also indicate that cells do not tend to roll as they move over a surface under normal conditions. The data are most consistent with a model where the membrane as a whole is stationary but where receptors that bind to the surface become coupled to sub-membrane contractile proteins.
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  • 21
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    Cell Motility and the Cytoskeleton 1 (1981), S. 387-397 
    ISSN: 0886-1544
    Keywords: birefringence ; polarizing microscope ; sea urchin egg ; cortex ; mitosis ; cleavage ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Birefringence (BR) at the cell surface of fertilized eggs of the sand-dollar, Clypeaster japonicus, during mitosis and cleavage was determined with a photoelectric BR detection apparatus [Hiramoto et al, 1981a]. The cortex of about 2 μm thickness is birefringent positive with respect to the normal to the cell surface. The hyaline layer is negatively birefringent. The halo-layer consisting of a row of microvilli surrounding the egg is positively birefringent in normal Ca-free sea water, while it is negatively birefringent in Ca-free sea water with high refractive index. The BR of the cortex gradually increases over the entire surface during mitosis until the onset of cleavage. The BR of the cortex at the polar region reaches a maximum shortly after the onset of cleavage and then decreases, while the BR of the cortex at the equatorial region begins to decrease shortly before the onset of cleavage, reaches a minimum shortly after the cleavage starts, and then increases again as the cleavage furrow advances. The coefficient of birefringence of the cortex is about 2.5 × 10-5 at the maximum. The BR change of the cortex during mitosis and cleavage is interpreted as a passive deformation caused by the constriction of the contractile ring as well as an active structural change of the cortex occurring in the dividing cell.
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    Cell Motility and the Cytoskeleton 1 (1981) 
    ISSN: 0886-1544
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
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  • 23
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    Cell Motility and the Cytoskeleton 1 (1981), S. 417-431 
    ISSN: 0886-1544
    Keywords: spindle poles ; centrioles ; cell center ; scaffold ; electron microscopy ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: I have used fluorescence microscopy and antibodies to 10nm filaments and tubulin labelled with contrasting fluorochromes to compare the distribution of these proteins in endothelial cells during cell division. During interphase the two filament systems have entirely different distributions: The bulk of the 10nm filaments form a ring that surrounds the cell center and nucleus and remains parallel to the substrate, while the microtubules radiate from the cell center to the cell's border. When the mitotic spindle replaces the radial microtubule pattern in mitosis, the spindle poles remain within - and in close proximity to - the ring of 10nm filaments. This was confirmed by electron microscopy which showed the ring and centrioles in the same plane separated by a distance of 300-400 nm.
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    Cell Motility and the Cytoskeleton 1 (1981), S. 399-416 
    ISSN: 0886-1544
    Keywords: myosin heavy chain ; avian muscular dystrophy ; adult and embryonic fast white fibers ; slow red fiber ; rod ; subfragment-1 ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Avian muscular dystrophy is characterized by the degeneration of fast white skeletal muscle fibers, with onset during development. Using a one-dimensional peptide mapping technique, we have detected two forms of the myosin heavy chain in the fast white fibers of adult domestic chickens, one form characteristic of birds homozygous for muscular dystrophy, the other of their normal controls. Four dystrophic strains carrying the same gene for muscular dystrophy were examined.No differences were detected in the embryonic heavy chain peptide maps of normal and dystrophic chickens, consistent with the developmental onset of the condition. Differences were also absent from the peptide maps of heavy chains from slow red fibers, which are unaffected in dystrophy. No dystrophy-specific peptide map differences were detected in the three light chains. Analysis of peptide maps of rod and the heavy chain component of subfragment-1 from normal and dystrophic heavy chains indicates the presence of amino acid sequence differences in the two proteins.
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    Cell Motility and the Cytoskeleton 1 (1981) 
    ISSN: 0886-1544
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
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    Cell Motility and the Cytoskeleton 1 (1981), S. 349-362 
    ISSN: 0886-1544
    Keywords: Ca2+ ; flagella ; symmetry ; vanadate ; spermatozoa ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Increased Ca2+ concentration causes a reversible increase in asymmetry of the flagellar bending waves of “potentially symmetric” demembranated sea urchin spermatozoa. When these flagella are immobilized with 5 μM vanadate, increased Ca2+ concentration causes a reversible increase in the total bend angle between the tip and the base of the immobilized flagella. These effects of Ca2+, and the movement which can be activated by CaATP2-, can be inhibited by vanadate, but in both cases, high concentrations of vanadate, of the order of 100 μM, are required. These observations suggest that ATP, possibly in the form of CaATP2-, is required for the Ca2+-induced change in shape of the flagella, but other observations suggest that the magnitudes of asymmetry and total bend angle are more closely related to Ca2+ concentration than to CaATP2- concentration.
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    Cell Motility and the Cytoskeleton 1 (1981), S. 363-370 
    ISSN: 0886-1544
    Keywords: Ca2+ ; Mg2+ ; symmetry ; flagella ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Potentially asymmetric spermatozoa are obtained when spermatozoa are demembranated in the presence of a low Ca2+/Mg2+ ion concentration ratio. They swim with asymmetric bending waves even when reactivated at low Ca2+ concentrations, and become more asymmetric when Ca2+ is increased. Potentially symmetric spermatozoa, which swim with symmetric bending waves at low Ca2+ and become asymmetric as the Ca2+ is increased, can be obtained by exposing the flagella to a high Ca2+/Mg2+ ratio, either during or subsequent to demembranation. The rate of this conversion is an increasing function of temperature and Triton concentration. Potentially symmetric spermatozoa can be reconverted to potential asymmetry, if the exposure to high Ca2+/Mg2+ is brief, and is terminated by addition of EGTA and Mg2+ before diluting the spermatozoa. The conversion to potential symmetry may involve removal of a labile component from the axoneme.
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    Cell Motility and the Cytoskeleton 1 (1981), S. 371-385 
    ISSN: 0886-1544
    Keywords: rotating filaments ; cytoplasmic streaming ; Nitella ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Notes: Our knowledge about the actin-containing characean filaments on the basis of light and electron microscopical investigations is reviewed. Dynamic filamentous networks, known already from isolated droplets, were detected in Nitella rhizoidal cells using light microscopical techniques. Earlier light microscopic observations in cytoplasmic droplets are confirmed and complemented by new model experiments with rotating helices. The motile phenomena occurring at the filament bundles (ring formation, wave propagation, particle translocation, net dynamics, rolling motions, formation of side arms) can, in this way, be imitated in detail. Thus, the concept of cytoplasmic streaming as a translocation along bundles of rapidly rotating helical filaments is supported. In order to explain unidirectional cytoplasmic streaming, a periodic winding up and unwinding of fine filaments is postulated by which ions are periodically bound and displaced. The formation of side arms which is favored during unwinding results in a screw-mechanical different behavior of the filaments in the two directions of rotation and therefore causes permanent particle transport in one direction.
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    International Journal of Quantum Chemistry 19 (1981), S. 293-300 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The mapping between the local one-body potential and the ground state density is discussed. The role of degenerate ground states, which form a set of measure zero in potential space, is shown to be amplified by the unitary transformation between degenerate densities, forming a space filling set in density space. A numerical experiment demonstrating these features is carried out. No indication of non-V representable densities is encountered.
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    International Journal of Quantum Chemistry 19 (1981), S. 283-291 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper we present a simple method within the coupled Hartree-Fock framework to calculate the 1s2s 3S state of helium and heliumlike ions. The results are in very good agreement with those obtained by the use of multiterm correlated wave functions. Some interesting observations associated with the wave function are presented.
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    International Journal of Quantum Chemistry 19 (1981), S. 319-335 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A scheme for obtaining approximate solutions of the electronic Schrödinger equation is formulated within the context of the method of moments. The flexibility of the method of moments is utilized in the construction of a model based on an antisymmetric product of geminals (APG). This APG model is compared with a model based on an antisymmetric product of strongly orthogonal geminals (APSG). As a test example the advocated APG model is applied to the ground state of ammonia. Our best APG function recovers 37% of the total molecular correlation energy to be compared with an estimated 31% for the best APSG function.
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    International Journal of Quantum Chemistry 19 (1981), S. 301-318 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The shape of correlation holes in many-electron systems is at present scarcely known, even where correlated wave functions are available. We investigate here the kind of electron correlation brought about by configuration interaction (CI), within a given basis set, in the wavefunction of a polyatomic system. The model ring system H6 (in two different bonding circumstances) and H14 have been chosen for a detailed study, because of their paradigmatic importance. We set out the equal-spin and different-spin correlation holes as obtained from complete CI calculations in H6 and partial ct in H14, both within a minimal basis set. We basically find the spinless correlation as being short range, while the spin-dependent correlation holes show long-range oscillations of antiferromagnetic character. We also present a natural spin-geminal analysis of the two-body reduced density matrices in these systems; we find a peculiarity possibly related to the long-range correlation discussed above. Finally, we compare the electron correlation as given from our CI wavefunction to other pictures of electron correlation, as obtained essentially from alternant molecular orbital wave functions and from the electron-gas literature.
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    International Journal of Quantum Chemistry 19 (1981), S. 337-359 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Some physical and chemical properties of the metabolites of the cancerostat cyclophosphamide (trade name: ENDOXAN) have been calculated with an appropriately prepared CNDO/S-CI method. The ground state properties (e.g., charge densities and free valences) do not indicate a significant change, compared with the results of cyclophosphamide, and the same fact is also true for the energy levels of the two lowest excited singlet and triplet states. With respect to the dipole transition moments only the metabolite N-mustard-diamido-phosphoric acid (Friedman acid) differs drastically from cyclophosphamide and the other metabolites. The chemical reactivity has been considered under the aspect of singlet-triplet transitions between quasidegenerate singlet and triplet states. Again Friedman acid behaves quite differently from the other compounds, and only this metabolite exhibits the remarkable ability to act as an alkylating agent via splitting off chloride ions.
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    International Journal of Quantum Chemistry 19 (1981), S. 361-372 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A new convenient and efficient finite-difference (FD) method is developed for solving the pair radial equations (PRE) of many electron perturbation theory (MPT). This method can be interpreted as the FD analog of the well-known Fourier method. The method is used to solve PRE arising in the second order of MPT based on the hydrogenic and Hartree-Fock (HF) zero approximations. Being very simple programmed our method gives results comparable with the most accurate variational calculations.
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    International Journal of Quantum Chemistry 19 (1981) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 19 (1981), S. 373-376 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Static dipole and quadrupole polarizability (αd and αq, respectively) values of coupled Hartree-Fock quality have been calculated for the alkaline earth atoms Be(2s), Mg(3s), Ca(4s), and Sr(5s) using a method based on the many-body perturbation theory. The present values of αd and αq for Be and αd for Mg are in excellent agreement with the other available results of similar accuracy. The CHF calculations of αd for Sr and αq for Mg, Ca, and Sr are being reported for the first time.
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    International Journal of Quantum Chemistry 19 (1981), S. 379-381 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The time-independent Schrödinger equation for a one-dimensional square step potential with impenetrable walls was solved to prove the suitability as an oscillator potential. The mathematical structure of the eigenvalue conditions and the number of eigenstates within one potential step are discussed.
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    International Journal of Quantum Chemistry 19 (1981), S. 611-635 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A direct method for calculating resonant states in reactive scattering is suggested, permitting us to obtain the characteristics of multichannel resonances (partial width amplitudes). The method is based on the construction of a Laurent expansion of the scattering matrix S(∊ -iΓ/2) in the complex plane. The position of the poles of the S matrix are derived by solving the dynamical problem with complex energy values. The residue at the pole gives all the information concerning the partial widths. The method is applied to a linear triatomic reactive scattering problem. The properties of the resonant states in the H + H2 system are calculated as an example. Two broad resonances are found which have not been reported in previous calculations. The interference of overlapping resonances is shown to have a profound effect on the energy dependence of the transition probabilities.
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    International Journal of Quantum Chemistry 19 (1981), S. 649-654 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The amount of work needed to evaluate the matrix elements in a configuration interaction calculation can be very large. This is especially true if the phase associated with bringing determinants into maximum coincidence is evaluated at the determinant level. A method is presented which allows the phase to be determined at the occupation level for arbitrarily coupled configuration state functions.
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    International Journal of Quantum Chemistry 19 (1981), S. 719-720 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
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    International Journal of Quantum Chemistry 19 (1981) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 19 (1981), S. 711-718 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Comparison of the molecular Q-optimized and molecular gradient optimized carbon basis sets for CH4 showed that molecular Q optimization is an excellent substitute to the more expensive molecular gradient optimization. The parameter Q of the Q optimization is related to the population (i.e., net charge) on the atom.
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    International Journal of Quantum Chemistry 19 (1981), S. 891-900 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
    Notes: Based on the all-valence ZDO SCF approximation a procedure for estimating the basis set superposition error (BSSE) in semiempirical CNDO/INDO methods has been proposed. The results of the calculation show that the BSSE effect may improve the results obtained from the standard CNDO/INDO supermolecule calculation. The estimated BSSE effect enables one to explain some recently reported artificial structures for water and ethylene dimers.
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    International Journal of Quantum Chemistry 19 (1981), S. 929-955 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An approach based on the topological distance matrix is used for algebraic characterization of bridged polycyclic compounds. The classical bridged structures which have external bridges between cycles were examined together with the more complicated three-dimensional polycyclic systems regarded as containing internal bridges. Thirteen rules are given for characterizing the main types of structural rearrangements in these compounds. The important topological characteristic of (poly)cyclic systems, the molecular cyclicity, is examined in the polycyclic condensed, spiro- and bridged structures, respectively.
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    International Journal of Quantum Chemistry 19 (1981), S. 907-927 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The accuracy of a new effective one-body potential is assessed by the study of the electronic structure of atoms from He to Kr. The exchange part of this potential is obtained from a local approximation. Several simplified representations of the electronic density which lead to analytic Coulomb potentials are tested. It is shown that the introduction of the shell structure of the density is necessary, at least for third row atoms. The screening parameters of the potential are variationally optimized with respect to the total energy of the atom. With the most elaborate form of the Coulomb potential which contains one screening parameter for each shell, the comparison of the results with exact Hartree-Fock calculations is very promising. The relative difference is on the order of 10-5 for the total energy and on the order of 10-2 for the orbital energies. Multiplet splitting is reproduced accurately and F- is predicted to be stable (in contrast some others local potentials) by an amount of 0.046 a.u., compared with 0.050 a.u. for an exact Hartree-Fock calculation.
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    International Journal of Quantum Chemistry 19 (1981), S. 969-969 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 19 (1981) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 19 (1981), S. 977-977 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 19 (1981), S. 991-1000 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The nature of problems connected with binding which arise in the everyday work of experimental physicists and material scientists is illustrated by reference to two different experimental studies. (i) Sliding in crystals of group V elements is found to take place not only along planes cutting the quasimetallic bonds, but also along planes apparently cutting their “covalent” bonds, thus suggesting that a more elaborate picture of the two types of bonds and of their interrelation is necessary. (ii) The physisorption of linear pentatriacontane on alkali chlorides indicates alignment of the paraffin molecules along the [110] directions. This may be associated with polarization of methylene groups by ions in the substrate. This hypothesis must be substantiated by suitable quantum-theoretical calculations, which in turn must be based on an adequate description of the adsorption bond.
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    International Journal of Quantum Chemistry 19 (1981), S. 1003-1010 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The point of view of chemical engineers concerning the possible contributions of fundamental research to their work is briefly illustrated by reference to catalyst design. Specific questions on which the author is working are mentioned. The growing importance of zeolites and their challenge for fundamental research is also pointed out.
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    International Journal of Quantum Chemistry 19 (1981), S. 1011-1016 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Which information on the properties of the adsorption complex can be obtained from the application of the standard methods in experimental surface science is discussed. None of the methods gives all the information necessary for a complete description of the chemisorption bond so that the results delivered by as many methods as possible should be taken into account.
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    International Journal of Quantum Chemistry 19 (1981), S. 1031-1041 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: It is the intent of this article to illustrate certain aspects of the present status of electrochemistry as regards theoretical interpretations. First a brief critical review of classical electrochemical kinetics is given and the directions are indicated in which improvement in theoretical treatments are hardly needed. Next, experimental results on the cathodic discharge of tin in darkness and in light are presented, and a tentative explanation based on the assumption that adatoms (and not adions) diffuse on the electrode surface as a result of stabilization by light is presented.
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    International Journal of Quantum Chemistry 20 (1981), S. 179-183 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Electrostatic interaction energy has been studied for the DNA base pair-RNA base complexes inside the deep groove of the DNA. The allowed region has been continuously scanned in order to find out a minimum energy configuration for each complex. A comparative study of the interactiion energy values and the site of association has been carried out. It has been found that the Watson-Crick G—C base pair shows a definite specificity similar to the model proposed by Zubay or Riley, while for the A—T pair, no specificity can be assigned on the basis of the interaction energy studies alone. Instead, an assumption for a hypothetical backbone directed by the G—C pair specificity, has been adopted to assign a specificity to the A—T pair. As a consequence of these studies, a model for transcription without unwinding of the DNA double helix has been developed.
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    International Journal of Quantum Chemistry 20 (1981), S. 199-209 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The three dimensional structure of human carbonic anhydrase-B has been model fitted to electron density maps in an interactive graphics display and improved by real space refinement and restrained least-squares refinement. The crystallographic R factor for the 5 to 3 Å data dropped from 41.5% to 36.5% after four cycles of least-squares refinement. The important residues involved in the function of the enzyme showed improved positional parameters after the refinement. Thus GLU106 and THR199 oxygen atoms are within hydrogen bond distance of each other after the refinement. Whereas they were very close to each other before the refinement. The procedures involved in the refinement and the implication of the structure to the mechanism of action of the enzyme are brought out.
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    International Journal of Quantum Chemistry 20 (1981), S. 211-230 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Introducing the concept of the “dinucleotide” as the helical repeat, theoretical attempts have been made to determine possible single and double stranded helical structures by using helical parameter calculations and model building investigations. By virtue of its flexible framework, the dinucleotide repeat offers a much greater scope of finding new secondary structural forms for nucleic acids. Considering only those conformations which show tendency for at least partial base overlap as does the dinucleotide helical repeat, it has been possible to predict poly(dinucleotide) helical models in which successive phosphodiesters as well as nucleotide conformations alternate. More important, the recently found left-handed Z-type polynucleotide helix is characterized rather uniquely on the helical parameter plot. The results further suggest the possibility of other Z-type helices obtainable by alternative conformations for the exocyclic C4'-C5' bond and sugar pucker. Near neighbor long range conformational correlations between the dinucleotide repeat and the phosphodiester linking them have been established similar to poly(mononucleotide) helices. Need for considering higher repeats such as trinucleotide has been suggested to obtain models for looped out helical conformations.
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  • 56
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    International Journal of Quantum Chemistry 20 (1981), S. 259-272 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A procedure for calculating the molecular electrostatic potentials on surface envelopes surrounding macromolecules is presented. This new representation of potential is employed in studying B-DNA double helices and, from the results, deductions are drawn on the interaction specificities of B-DNA with electrophiles.
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  • 57
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    International Journal of Quantum Chemistry 20 (1981), S. 357-367 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: PCILO computations have been carried out on the conformation of 3'-deoxyadenosine (cordycepin) and 3'-amino-3'-deoxyadenosine. These nucleoside antibiotics results as a consequence of modification in the sugar part of adenosine. Both C(2')-endo and C(3')-endo sugar puckerings have been considered in the computations and the results obtained indicate that these nucleoside antibiotics have very similar conformational preferences as compared to those of the parent nucleoside adenosine. This similarity which is quite marked in aqueous solution has important biological significance.
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    International Journal of Quantum Chemistry 20 (1981), S. 377-383 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In traditional quantum electrodynamic derivation of a intermolecular van der Waals force, the molecules are assumed to be localized clusters of electrons. In this paper we have assumed the molecules to be localized clusters of bosons and have shown that the expression of the potential remains formally the same. This vindicates, through a microscopic derivation, the established concept that the van der Waals interaction is essentially a macroscopic phenomenon.
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  • 59
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    International Journal of Quantum Chemistry 20 (1981), S. 543-554 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Infrared spectroscopy has been employed to study possible base pair interactions, in nonpolar media, between O6-methylguanine and uracil, cytosine and adenine; and between derivatives of N4-hydroxycytosine and adenine. The association constants of O6-methylguanine with uracil, cytosine, and adenine are well below 1M-1, whereas those for interaction of 1-methyl-N4-methoxycytosine and its 5-methyl derivative with adenine are identical, K = 14M-1. The significance of the latter finding is discussed in relation to the conformation of the exocyclic N4-methoxy group. Quantum chemical calculations, with the aid of the perturbation method, were carried out for the interaction of O6-methylguanine with uracil, cytosine, and adenine, to establish the most energetically favoured configurations for interactions of the free bases, and of the same base pairs in the B form of DNA. The role of the conformation of the exocyclic  - OCH3 group in O6-methylguanine is discussed. The relevance of both the experimental and theoretical results to mutagenesis by O6-methylguanine and N4-hydroxycytosine is examined.
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    International Journal of Quantum Chemistry 20 (1981), S. 589-590 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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  • 61
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    International Journal of Quantum Chemistry 20 (1981) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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  • 62
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    International Journal of Quantum Chemistry 20 (1981), S. 601-612 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
    Notes: Possibilities of improving individual contributions to the statistical interaction energy (kinetic and exchange) are examined. A new method of calculating statistical interaction energies is proposed. The exchange term is calculated using a suitably modified second-order gradient correction. For the kinetic contribution the accurate formula corresponding to the first-order perturbation theory is applied. The calculations have been carried out for several pairs of noble gas atoms.
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    International Journal of Quantum Chemistry 20 (1981), S. 623-632 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: New theoretical developments based upon hypervirial analysis of enclosed systems are given. Systems which obey unsymmetrical boundary conditions are analyzed. Several results which were given by the authors in two previous communications are generalized.
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    International Journal of Quantum Chemistry 20 (1981), S. 633-644 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The calculus of the overlap integral for two states represented by the vibrational wave functions ψν′a and ψν″b is reduced to that of the Franck-Condon integral ℒ(0, x) = ∫0x ψν′aψν″b (t) dt. It is proved that for “numerical potentials” (as well as for a Dunham potential), this integral is given on each interval by a simple analytic expression in terms of the two potentials. The Franck-Condon factors are well determined by “coupling constants” related uniquely to the coordinates of the turning points of the potentials. An application to the band system BII—XΣ of Nα2 is compared with the usual numerical methods.
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    International Journal of Quantum Chemistry 20 (1981), S. 655-667 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
    Notes: The CASSCF method has been applied to some excited states of the BO molecule. Only portions of the full potential curves could be obtained with the help of the usual two-step procedure. It was possible to complete the curves and to consider other excited states by using an averaged field technique. In this approach the energies were computed with orbitals that were self-consistently determined with first- and second-order density matrices averaged over several states.
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    Topics: Chemistry and Pharmacology
    Notes: Ab initio MODPOT/VRDDO/MERGE calculations were carried out on carcinogenic 3-methylcholanthrene (3-MCA) and its metabolites. The results for 3-MCA were compared to our earlier similar calculations for carcinogenic benzo(a)pyrene (BP). Both compounds 3-MCA and BP are carcinogenic and are metabolically activated by similar mechanisms but in different positions. Both the calculated wave functions for 3-MCA and BP and the electrostatic molecular potential contour maps generated from these wave functions correctly reflect the similarity of mechanisms of metabolic activation and the differences in position. Our calculated results both for BP and for 3-MCA reflect accurately their experimentally observed behavior. Thus this combination of theoretical techniques can be used with confidence to describe the behavior of the polycyclic aromatic hydrocarbons (PAH's) and their metabolites. The ab initio MODPOT/VRDDO method incorporates two very desirable options into our fast ab initio Gaussian programs: MODPOT-ab initio effective core model potentials - and a charge-conserving integral prescreening approximation which we named VRDDO (variable retention of diatomic differential overlap). For orbital energies and population analysis the MODPOT/VRDDO results agree to essentially three decimal places with completely ab initio calculations using the same valence atomic basis set. For this series of very closely related congeners our recent MERGE technique which allows reuse of integrals from a common skeletal fragment was used. The ab initio MODPOT/VRDDO/MERGE calculations were carried out for 3-MCA, 3-MCA oxides, 3-MCA dihydrodiols, and 3-MCA dihydrodiolepoxides. The metabolites investigated were 3-MCA 9,10-oxide; 3-MCA 7,8-oxide; 3-MCA 9,10-dihydrodiol [trans(axial, axial); trans(equatorial, equatorial); cis(axial, equatorial); cis(equatorial, axial)]; and 3-MCA 9,10-dihydrodiol-7,8-epoxide [for both conformations A and B of the dihydrodiol and for all stereoisomers of the dihydrodiolepoxides relative to below and above the plane: ααα, and ααβ αβα αββ βαα βαβ ββα and βββ (most stable)]. Calculations were also carried out for opening of the C7—O—C8 epoxide ring both towards C7 and C8 for the most stable isomer Aβββ (above the ring). Opening the epoxide ring between C7 and O leads to a more stable intermediate than opening the epoxide ring between C8 and O. Again, however, as with opening the epoxide ring in BP 7,8-dihydrodiol-9,10-epoxide there is no buildup of positive charge on C7 in the 3-MCA metabolites as postulated by some cancer researchers, but rather the C7 becomes slightly more negative. Nor is there a buildup of negative charge on the O atom, but rather it becomes slightly more positive. As the epoxide ring is opened further than 90° for the O—C7—C8 or O—C8—C7 angles, there appears to be a possible mixing of configurations that is being investigated further.
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    Notes: The single excited doublet states of some small molecule cations calculated by CI method in the framework of semiempirical CNDO and INDO models are correlated with the photoelectron spectra of the parent molecules. The purity of the Koopmans transitions is used to discuss the one-particle interpretation of photoelectron bands by comparison with nonempirical many-body calculations. Furthermore, empirical relations are applied with respect to the evaluation of shake-up energies.
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    International Journal of Quantum Chemistry 20 (1981), S. 717-745 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
    Notes: Calculations of Kato's equations have been carried out as a function of the coordinates of the system using a number of approximate wave functions in order to determine the effects of the energy, electron density, constraints, and the functional form of the wave functions on how well Kato's equations are obeyed. It is shown that by putting constraints on the functional form of some wave functions, the wave functions will give the exact value of Kato's equations.
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    International Journal of Quantum Chemistry 20 (1981), S. 705-715 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The ab initio valence bond method has been used to study the ground and the lowest vertical valence ionized states of pyridine. On the basis of our calculations the first two ionization potentials are assigned to π and n electron removals, respectively. The final wave functions have been interpreted in terms of valence bond structures by means of an appropriate population analysis.
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    International Journal of Quantum Chemistry 20 (1981), S. 747-753 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Both short-range and long-range intermolecular interaction energies between two prophin molecules, both in their ground state, separated by a range of interplanar distances from 3 to 4.5 Å, are estimated using the standard perturbation theory. The results indicate that a 60° rotated sandwich structure is the most stable conformation for the dimer. Certain translated as well as the perfect sandwich forms are other favoured structures. The stability of the dimer is mainly due to the van der Waals interactions with no significant contribution from the charge-transfer interactions. Biochemical implications of these findings are discussed.
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    International Journal of Quantum Chemistry 20 (1981), S. 755-762 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
    Notes: Proton affinities, geometries with optimized parameters, and net atomic charges are reported for guanidine-, methyl-, amino-, and fluoro-substituted guanidines. The results are obtained using the ab initio SCF method as implemented by the GAUSSIAN-70 computer program with a 6-31G basis set. Basicity is discussed in terms of electron distribution and intramolecular attraction forces.
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    International Journal of Quantum Chemistry 20 (1981), S. 775-776 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 20 (1981), S. 763-774 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The Racah method, proposed for the evaluation of coefficients of fractional parentage (CFP) for single shell configurations, is generalized for the cases of two and more than two shells. On the basis of the generalized Racah method, we have evaluated one-particle CFP for all states of svpμ electronic configurations. Two-particle CFP are expressed through one-particle CFP and Racah coefficients.
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    International Journal of Quantum Chemistry 20 (1981), S. 777-778 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 20 (1981), S. 779-780 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 20 (1981) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 20 (1981), S. 781-783 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
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    International Journal of Quantum Chemistry 20 (1981), S. 785-792 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A formalism for the determination of the most favored sites of monohydration and the orientation of water molecules around a solute by means of electrostatic potentials is suggested. The results of this method may serve as starting point for explicit supermolecule calculations. The hydration schemes determined in this way for the tautomeric forms of 2- and 4-hydroxypyridine can be used as a basis for the evaluation of the displacement of the lactam-lactim equilibrium under the influence of the water environment.
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    Topics: Chemistry and Pharmacology
    Notes: Second order MCSCF theory is presented in a unitary group formulation for any multiplicity without spin projection. Its reduction to lower order theory is discussed, as well as its extension through the use of effective Hamiltonians.
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    International Journal of Quantum Chemistry 20 (1981), S. 887-889 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
    Notes: The limiting of the 〈r12-1〈/〈r1-1〈 ratio in the He sequence is critically examined at different levels of approximations leading to some interesting results.
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    International Journal of Quantum Chemistry 20 (1981), S. 891-896 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We report on the band structure and wave functions of positrons, annihilating with electrons, from the thermalized state k+ = 0. We find that the bottom of the band to which the positron thermalizes in this metal is definitely nonambiguous. It is also found that even though the first few Bloch terms in the wave function can give the gross shape of the positron annihilation curve for this metal, the higher momentum components of high orders are definitely important if one is to assay the fine details of the curve.
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    International Journal of Quantum Chemistry 20 (1981), S. 897-908 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The Silverstone-Stuebing variational principle for the discontinuous wave functions of one-electron systems is generalized for many-electron systems. The variational functional of energy takes real or complex value. The condition that it is real is given. Using the generalized variational principle, a multiconfiguration SCF theory for the composite molecular wave function is formulated. According to the theory, we may divide the whole space into space-filling cells, solve the SCF equations in each cell and build up the wave functions of the system by gathering the wave functions obtained in the cells. For use in the basis-set expansion method, the SCF equations are rewritten as matrix forms in which only one- and two-center integrals appear if an expansion center is located in each cell.
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    International Journal of Quantum Chemistry 20 (1981), S. 955-1065 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
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    International Journal of Quantum Chemistry 20 (1981), S. 1073-1076 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Generalized oscillator strengths and integrated cross sections from threshold to 1 keV are calculated in the Born approximation for the electron impact excitation of O II.
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    International Journal of Quantum Chemistry 20 (1981), S. 1067-1071 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: One-electron properties may be evaluated by configuration interaction methods using analytical differentiation of the total energy with respect to an external perturbation parameter. Dipole moments are reported using such a method for CO and H2CO. Inclusion of single substitutions does not change calculated dipole moments appreciably with this method. The differences between this method and the direct evaluation of an expectation value are discussed.
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    International Journal of Quantum Chemistry 20 (1981), S. 1127-1139 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Theoretical aspects of the MS Xα method are analyzed. It is shown that real field self-consistency is not achieved in an MS Xα calculation and some consequences of this fact are discussed. The approximations involved in the use of the transition-state procedure to evaluate ionization and excitation energies from a MS Xα calculation are presented in some detail and commented.
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    International Journal of Quantum Chemistry 20 (1981) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 20 (1981), S. 1165-1177 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A recently proposed orthonormality constrained orbital optimization technique is operationally modified further by coupling it to a gradient biased method, namely the steepest descent procedure of McWeeny. The hybrid technique developed in this way is shown to have better convergence properties in closed and unrestricted open-shell calculations. The technique can be adapted to MCSCF procedures as well. The important role played by "orbital symmetries" in the operation of the method is analysed. Similarities and differences of the present method with the orthogonal gradient method are pointed out. Possible avenues of circumventing convergence difficulty that one may encounter in pathological cases, particularly in ab initio calculations involving extended basis set, are suggested.
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    International Journal of Quantum Chemistry 20 (1981), S. 1179-1199 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: For arbitrary k, the separation of spin variables is performed in the reduced density matrix of the kth order (RDM-k) on the basis of the Fock coordinate function method. The independent spatial components of RDM-k are analyzed. For RDM-k of the total spin eigenstate, their number is proved never to exceed its spin multiplicity 2s + 1. Integral and other nontrivial interrelations between spatial components are established which turn out to be the necessary and sufficient conditions of spin purity of a wavefunction corresponding to a given RDM-k. It is shown that the r-rank k-particle spin distribution matrix Fkr, defined as a spatial coefficient at the spin-tensorial operator of rank r in the RDM-k expansion, can be obtained by reduction of the (k + r)-particle charge density matrix Fk+r0. In particular, all spatial components of RDM-2 are explicitly expressed in terms of the four-electron charge density matrix only. This allows us to purpose some approximative formulas for the McWeeny-Mizuno spin-orbit and spin-spin coupling functions in the case of the weak spin contamination.
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  • 90
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    International Journal of Quantum Chemistry 20 (1981), S. 1217-1224 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Formulas can be automatically generated for all two-center Coulomb integrals over Slater-type orbitals by means of the “C-matrix” single-center expansion method with use of “computer algebra.” The formula coefficients may be stored in two-dimensional arrays.
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  • 91
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The conditions for instability of solutions of Hartree-Fock and projected Hartree-Fock equations are derived in a form involving finite real symmetric matrices. These conditions are also expressed in terms of the Fock-Dirac density matrix, both at the spin-orbital and at the orbital level. The particular variations which give rise to the so-called singlet and triplet instabilities are described.
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  • 92
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    International Journal of Quantum Chemistry 20 (1981), S. 1225-1231 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Interactions of catecholamines with acidic sites in the biophase are likely to be involved in the control of the receptors activity as well as in storage and transport mechanisms. In view of the importance of the phenomena a model study of ethanolamine-phosphate complexes was made. The electrostatic interaction energy surface was calculated in the charge density multipole expansion approximation with terms up to quadrupole. The consecutive minimal energy conformation shows the importance for the interaction with the biophase of the catechol ring steric and electronic relation to the side chain.
    Additional Material: 3 Ill.
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  • 93
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    International Journal of Quantum Chemistry 20 (1981), S. 1233-1241 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The well-known Hausdorff similarity transformation is used to derive a number of identities for exponential operators. The method does not give new results, but is shown to be a simple alternative to Feynman disentangling, parameter differentiation-differential equation, coherent states, and Lie-algebraic-matrix techniques.
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  • 94
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    International Journal of Quantum Chemistry 20 (1981), S. 1243-1253 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The connections between open shell Brillouin-Wigner perturbation theory and the Van Vleck unitary transformation formalisms for generating effective Hamiltonians are explored. An explicit expression is obtained relating the generator Ŝ of the unitary transformation eiŝ with the amplitudes to be found from perturbation theory. The “renormalization effects” needed to produce the explicit “orthogonal-Hermitian” form of the effective Hamiltonian in perturbation theory are related directly to the generator of the unitary transformation. The conclusions reached previously by Jørgensen and Brandow regarding the identity of the effective Hamiltonians of the formalisms are explicitly verified for the case that the generator Ŝ satisfied the Kemble condition. The procedure suggests how the powerful techniques of perturbation theory can be used within the unitary transformation framework to guarantee properly renormalized wave functions.
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  • 95
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 20 (1981), S. 1255-1271 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Symmetry simplifications are introduced in configuration interaction (CI) by reducing the number of symmetry-allowed space types if there is degeneracy in some of the molecular orbitals by constructing the unique space types. A new symmetry group which we call the configuration symmetry group is defined and is shown to be expressible as a generalized wreath product group. Generating functions are derived for enumerating the equivalence classes of space types. A double coset method is expounded which constructs the representatives of all equivalence classes of space types using the cycle index of generalized wreath product and the double cosets of label subgroup with generalized wreath product in the symmetric group Sn, if n is twice the number of occupied and virtual orbitals. Method is illustrated with CI using the localized orbitals of polyenes, CI in benzene, and atomic CI for several reference states.
    Additional Material: 2 Tab.
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  • 96
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    International Journal of Quantum Chemistry 20 (1981), S. 1273-1284 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Several useful “redefined zero-order Hamiltonian” variants of the Rayleigh-Schrödinger perturbation theory are derived by exploiting the freedom of choice for the orthogonality integral between zero- and first-order wavefunctions. It is found that the more common Hamiltonian repartitioning schemes follow quite naturally, as a consequence of certain consistency requirements. The strategy adopted may as well be employed to derive various newer and profitable zero-order Hamiltonians depending on the nature of the problems. This implication is strengthened by demonstrating the calculational success of one such derived scheme. Feenberg's “scale-changed” Hamiltonian approach is also reinterpreted in the present context.
    Additional Material: 3 Tab.
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  • 97
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    International Journal of Quantum Chemistry 20 (1981), S. 1285-1300 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The exponential transformation of the molecular orbitals, that has been previously used to achieve a process with a convergence of quadratic quality in SCF closed-shell calculations [J. Chem. Phys. 72, 1452 (1980)] has been extended to UHF determinantal wave functions built from different orbitals for different spins. Explicit formulas are given for the first and second derivatives of the energy to be varied. The method is illustrated by UHF calculations for systems described as standard singlets (Li2 and F2) or triplets (NH) at the RHF approximation level, as well as for CH, CH2, CH3 molecular fragments in their valence states.
    Additional Material: 5 Tab.
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  • 98
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    International Journal of Quantum Chemistry 20 (1981), S. 1333-1333 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 99
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 20 (1981), S. 1332-1332 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 100
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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