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  • Nature Publishing Group  (363,504)
Collection
Years
  • 1
    Journal cover
    Unknown
    Shanghai Institute of Materia Medica, Chinese Academy of Sciences | Nature Publishing Group
    Online: 1.1980 – (older than 12 months)
    Publisher: Shanghai Institute of Materia Medica, Chinese Academy of Sciences , Nature Publishing Group
    Print ISSN: 1671-4083
    Electronic ISSN: 0253-9756
    Topics: Chemistry and Pharmacology , Medicine
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  • 2
    Journal cover
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    Nature Publishing Group
    Online: 1.2010 –
    Publisher: Nature Publishing Group
    Electronic ISSN: 2041-4889
    Topics: Biology , Medicine
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  • 3
    Journal cover
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    Nature Publishing Group
    Online: 4(1).1997 –
    Publisher: Nature Publishing Group
    Print ISSN: 1350-9047
    Electronic ISSN: 1476-5403
    Topics: Biology , Medicine
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  • 4
    Journal cover
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    Nature Publishing Group | Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences
    Online: 2015 –
    Publisher: Nature Publishing Group , Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences
    Electronic ISSN: 2056-5968
    Topics: Biology , Medicine
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  • 5
    Journal cover
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    Shanghai Institute of Cell Biology | Nature Publishing Group
    Online: 1(1).1990 –
    Publisher: Shanghai Institute of Cell Biology , Nature Publishing Group
    Print ISSN: 1001-0602
    Electronic ISSN: 1748-7838
    Topics: Biology , Medicine
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  • 6
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    Nature Publishing Group | PubMed Central
    Online: 6.1998 – (older than 12 months)
    Publisher: Nature Publishing Group , PubMed Central
    Print ISSN: 1018-4813
    Electronic ISSN: 1476-5438
    Topics: Biology , Medicine
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  • 7
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    Nature Publishing Group | ISME (International Society for Microbial Ecology), PubMed Central
    Online: 1.2007 – (older than 12 months)
    Publisher: Nature Publishing Group , ISME (International Society for Microbial Ecology), PubMed Central
    Corporation: International Society for Microbial Ecology, ISME
    Print ISSN: 1751-7362
    Electronic ISSN: 1751-7370
    Topics: Biology
    Keywords: Mikrobiologie
    Parallel titles: The ISME Journal
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  • 8
    Journal cover
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    Nature Publishing Group | ChangChun Institute of Optics, Fine Mechanics, and Physics (CIOMP)
    Online: 1.2012 –
    Publisher: Nature Publishing Group , ChangChun Institute of Optics, Fine Mechanics, and Physics (CIOMP)
    Electronic ISSN: 2047-7538
    Topics: Physics
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  • 9
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    Nature Publishing Group
    Online: 1.1869 –
    Print: 289.1981 – 416.2002 (Location: A43, LZ 5-7 Oben)
    Print: 45.1891 – 234.1971 (Location: A62, MOP)
    Print: 173.1954 – 492.2012 (Location: A17, Kompaktmagazin, 49/1 - 51/1)
    Publisher: Nature Publishing Group
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 10
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    Nature Publishing Group
    Online: 2006 – 2012
    Publisher: Nature Publishing Group
    Electronic ISSN: 1756-0357
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Medicine , Natural Sciences in General , Physics
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  • 11
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    Nature Publishing Group
    Online: 2007 – 2009
    Publisher: Nature Publishing Group
    Electronic ISSN: 1754-8705
    Topics: Biology , Medicine
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  • 12
    Journal cover
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    Nature Publishing Group
    Online: 1.1999 –
    Publisher: Nature Publishing Group
    Print ISSN: 1465-7392
    Electronic ISSN: 1476-4679
    Topics: Biology , Medicine
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  • 13
    Journal cover
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    Nature Publishing Group
    Online: 1.1998 –
    Publisher: Nature Publishing Group
    Print ISSN: 1097-6256
    Electronic ISSN: 1546-1726
    Topics: Biology , Medicine
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  • 14
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    Nature Publishing Group
    Online: 1998 –
    Publisher: Nature Publishing Group
    Electronic ISSN: 1744-7933
    Topics: Natural Sciences in General
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  • 15
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    Nature Publishing Group
    Online: 229.1971 – 246.1973
    Publisher: Nature Publishing Group
    Print ISSN: 0300-8746
    Electronic ISSN: 1476-4687
    Topics: Physics
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  • 16
    Journal cover
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    Nature Publishing Group
    Online: 1.2015 –
    Publisher: Nature Publishing Group
    Print ISSN: 2055-026X
    Electronic ISSN: 2055-0278
    Topics: Biology
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  • 17
    Journal cover
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    Nature Publishing Group
    Online: 1.2007 –
    Publisher: Nature Publishing Group
    Print ISSN: 1754-2189
    Electronic ISSN: 1750-2799
    Topics: Natural Sciences in General
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  • 18
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    Nature Publishing Group
    Online: 1.2002 –
    Publisher: Nature Publishing Group
    Print ISSN: 1474-1776
    Electronic ISSN: 1474-1784
    Topics: Chemistry and Pharmacology , Medicine
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  • 19
    Journal cover
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    Nature Publishing Group
    Online: 1.2000 –
    Publisher: Nature Publishing Group
    Print ISSN: 1471-0072
    Electronic ISSN: 1471-0080
    Topics: Biology
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  • 20
    Journal cover
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    Nature Publishing Group
    Online: 1.1994 –
    Formerly as: Nature Structural Biology  (1994–2003)
    Publisher: Nature Publishing Group
    Print ISSN: 1072-8368 , 1545-9993
    Electronic ISSN: 1072-8368 , 1545-9985
    Topics: Biology , Medicine
    Acronym: NSMB
    Abbreviation: Nat Struct Mol Biol
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  • 21
    Journal cover
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    Nature Publishing Group | Tokyo Institute of Technology
    Online: 1(1).2009 –
    Publisher: Nature Publishing Group , Tokyo Institute of Technology
    Print ISSN: 1884-4049
    Electronic ISSN: 1884-4057
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
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  • 22
    Journal cover
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    Nature Publishing Group
    Online: 2015 –
    Publisher: Nature Publishing Group
    Electronic ISSN: 2055-5008
    Topics: Biology
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  • 23
    Journal cover
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    Nature Publishing Group | Biocentury
    Online: 1.2008 – 7.2014
    Publisher: Nature Publishing Group , Biocentury
    Electronic ISSN: 1945-3477
    Topics: Natural Sciences in General
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  • 24
    Journal cover
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    Springer Nature | Nature Publishing Group | PubMed Central
    Online: 1.2011 –
    Publisher: Springer Nature , Nature Publishing Group , PubMed Central
    Electronic ISSN: 2045-2322
    Topics: Natural Sciences in General
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  • 25
    Journal cover
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    Nature Publishing Group
    Online: 4.1997 –
    Publisher: Nature Publishing Group
    Print ISSN: 0969-7128
    Electronic ISSN: 1476-5462
    Topics: Biology , Medicine
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  • 26
    Journal cover
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    Nature Publishing Group | ISME (International Society for Microbial Ecology)
    Online: 1.2007 –
    Publisher: Nature Publishing Group , ISME (International Society for Microbial Ecology)
    Corporation: International Society for Microbial Ecology, ISME
    Print ISSN: 1751-7362
    Electronic ISSN: 1751-7370
    Topics: Biology
    Keywords: Mikrobiologie
    Parallel titles: The ISME Journal
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  • 27
    Journal cover
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    Japan Antibiotics Research Association | Nature Publishing Group
    Online: 58.2005 – (older than 5 years)
    Publisher: Japan Antibiotics Research Association , Nature Publishing Group
    Print ISSN: 0021-8820 , 0368-3532
    Electronic ISSN: 1881-1469
    Topics: Chemistry and Pharmacology , Medicine
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  • 28
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    Nature Publishing Group
    Online: 22.1977 –
    Publisher: Nature Publishing Group
    Print ISSN: 1434-5161
    Electronic ISSN: 1435-232X
    Topics: Biology , Medicine
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  • 29
    Journal cover
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    Nature Publishing Group
    Online: 22.1977 – (older than 5 years)
    Publisher: Nature Publishing Group
    Print ISSN: 1434-5161
    Electronic ISSN: 1435-232X
    Topics: Biology , Medicine
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  • 30
    Journal cover
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    Nature Publishing Group
    Online: 1.2000 –
    Publisher: Nature Publishing Group
    Print ISSN: 1529-2908
    Electronic ISSN: 1529-2916
    Topics: Biology , Medicine
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  • 31
    Journal cover
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    Nature Publishing Group
    Online: 1.2001 –
    Publisher: Nature Publishing Group
    Print ISSN: 1470-269X
    Electronic ISSN: 1473-1150
    Topics: Chemistry and Pharmacology
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  • 32
    Journal cover
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    Nature Publishing Group
    Online: 1.2001 – (older than 5 years)
    Publisher: Nature Publishing Group
    Print ISSN: 1470-269X
    Electronic ISSN: 1473-1150
    Topics: Chemistry and Pharmacology
    Parallel titles: The Pharmacogenomics Journal
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  • 33
    Journal cover
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    Nature Publishing Group
    Online: 2014 –
    Publisher: Nature Publishing Group
    Electronic ISSN: 2052-4463
    Topics: Nature of Science, Research, Systems of Higher Education, Museum Science
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  • 34
    Journal cover
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    Shanghai Institute of Cell Biology | Nature Publishing Group
    Online: 1.1990 – (older than 12 months)
    Publisher: Shanghai Institute of Cell Biology , Nature Publishing Group
    Print ISSN: 1001-0602
    Electronic ISSN: 1748-7838
    Topics: Biology , Medicine
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  • 35
    Journal cover
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    Nature Publishing Group
    Online: 1.1999 – (older than 5 years)
    Publisher: Nature Publishing Group
    Print ISSN: 1466-4879
    Electronic ISSN: 1476-5470
    Topics: Biology , Medicine
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  • 36
    Journal cover
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    Nanjing Agricultural University | Nature Publishing Group
    Online: 1.2014 –
    Publisher: Nanjing Agricultural University , Nature Publishing Group
    Electronic ISSN: 2052-7276
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
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  • 37
    Journal cover
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    Nature Publishing Group
    Online: 1.2000 –
    Publisher: Nature Publishing Group
    Print ISSN: 1471-0056
    Electronic ISSN: 1471-0064
    Topics: Biology , Medicine
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  • 38
    Journal cover
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    Nature Publishing Group
    Online: 1.2016 –
    Publisher: Nature Publishing Group
    Electronic ISSN: 2058-8437
    Topics: Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
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  • 39
    Journal cover
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    Nature Publishing Group
    Online: 1.2003 –
    Publisher: Nature Publishing Group
    Print ISSN: 1740-1526
    Electronic ISSN: 1740-1534
    Topics: Biology , Medicine
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  • 40
    Journal cover
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    Nature Publishing Group
    Online: 1.2005 –
    Publisher: Nature Publishing Group
    Print ISSN: 1552-4450
    Electronic ISSN: 1552-4469
    Topics: Biology , Chemistry and Pharmacology
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  • 41
    Journal cover
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    Nature Publishing Group
    Online: 38(1).2006 –
    Publisher: Nature Publishing Group
    Print ISSN: 0032-3896
    Electronic ISSN: 1349-0540
    Topics: Chemistry and Pharmacology , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
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  • 42
    Journal cover
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    Nature Publishing Group | Cell Death Differentiation Association
    Online: 2015 –
    Publisher: Nature Publishing Group , Cell Death Differentiation Association
    Electronic ISSN: 2058-7716
    Topics: Biology , Medicine
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  • 43
    Journal cover
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    Nature Publishing Group
    Online: 6.1998 –
    Publisher: Nature Publishing Group
    Print ISSN: 1018-4813
    Electronic ISSN: 1476-5438
    Topics: Biology , Medicine
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  • 44
    Journal cover
    Unknown
    Nature Publishing Group
    Online: 4.1997 – (older than 5 years)
    Publisher: Nature Publishing Group
    Print ISSN: 0969-7128
    Electronic ISSN: 1476-5462
    Topics: Biology , Medicine
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  • 45
    Journal cover
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    Nature Publishing Group
    Online: 1.1999 –
    Publisher: Nature Publishing Group
    Print ISSN: 1466-4879
    Electronic ISSN: 1476-5470
    Topics: Biology , Medicine
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  • 46
    Journal cover
    Unknown
    Japan Antibiotics Research Association | Nature Publishing Group
    Online: 58.2005 –
    Publisher: Japan Antibiotics Research Association , Nature Publishing Group
    Print ISSN: 0021-8820 , 0368-3532
    Electronic ISSN: 1881-1469
    Topics: Chemistry and Pharmacology , Medicine
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  • 47
    Journal cover
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    Nature Publishing Group
    Online: 1.1983 –
    Formerly as: Bio-Technology  (1983–1996)
    Publisher: Nature Publishing Group
    Print ISSN: 0733-222X , 1087-0156
    Electronic ISSN: 1546-1696
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
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  • 48
    Journal cover
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    Nature Publishing Group
    Online: 1.2009 –
    Publisher: Nature Publishing Group
    Print ISSN: 1755-4330
    Electronic ISSN: 1755-4349
    Topics: Chemistry and Pharmacology
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  • 49
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    Nature Publishing Group
    Online: 1(1).2010 –
    Publisher: Nature Publishing Group
    Electronic ISSN: 2041-1723
    Topics: Biology , Chemistry and Pharmacology , Natural Sciences in General , Physics
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  • 50
    Journal cover
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    Nature Publishing Group
    Online: 1.1992 –
    Publisher: Nature Publishing Group
    Print ISSN: 1061-4036
    Electronic ISSN: 1546-1718
    Topics: Biology , Medicine
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  • 51
    Journal cover
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    Nature Publishing Group
    Online: 1.2000 –
    Publisher: Nature Publishing Group
    Print ISSN: 1471-003X
    Electronic ISSN: 1471-0048
    Topics: Biology , Medicine
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  • 52
    Journal cover
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    Nature Publishing Group
    Online: 1.2004 –
    Publisher: Nature Publishing Group
    Print ISSN: 1548-7091
    Electronic ISSN: 1548-7105
    Topics: Biology , Medicine
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  • 53
    Journal cover
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    Nature Publishing Group
    Online: 1.2006 –
    Publisher: Nature Publishing Group
    Print ISSN: 1748-3387
    Electronic ISSN: 1748-3395
    Topics: Biology , Chemistry and Pharmacology , Physics
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  • 54
    Journal cover
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    Nature Publishing Group
    Online: 1.1995 –
    Publisher: Nature Publishing Group
    Print ISSN: 1078-8956
    Electronic ISSN: 1546-170X
    Topics: Biology , Medicine
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  • 55
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    Nature Publishing Group
    Online: 229(1).1971 – 246(155).1973
    Publisher: Nature Publishing Group
    Print ISSN: 0090-0028 , 0369-4887
    Electronic ISSN: 1476-4687
    Topics: Biology
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  • 56
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    Nature Publishing Group
    Online: 1.2007 – 4(5).2010
    Publisher: Nature Publishing Group
    Electronic ISSN: 1753-9315
    Topics: Geosciences
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  • 57
    Journal cover
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    Nature Publishing Group | Shanghai Institute of Ceramics of the Chinese Academy of Sciences
    Online: 2015 –
    Publisher: Nature Publishing Group , Shanghai Institute of Ceramics of the Chinese Academy of Sciences
    Electronic ISSN: 2057-3960
    Topics: Computer Science , Mechanical Engineering, Materials Science, Production Engineering, Mining and Metallurgy, Traffic Engineering, Precision Mechanics
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  • 58
    Journal cover
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    Nature Publishing Group
    Online: 2015 –
    Publisher: Nature Publishing Group
    Electronic ISSN: 2373-8065
    Topics: Physics
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  • 59
    Journal cover
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    Nature Publishing Group
    Online: 2015 –
    Publisher: Nature Publishing Group
    Electronic ISSN: 2056-6387
    Topics: Physics
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  • 60
    Journal cover
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    Nature Publishing Group
    Online: 2015 –
    Publisher: Nature Publishing Group
    Electronic ISSN: 2056-7189
    Topics: Biology
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  • 61
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    Nature Publishing Group | JSTOR
    Online: 1(1).1845 –
    Print: 268.1993 – 303(5).2010 (Location: A17, Kompaktmagazin, 64/5-6)
    Print: 270.1994 – 282.2000 (Location: A17, Kompaktmagazin, 64/5-6)
    Publisher: Nature Publishing Group , JSTOR
    Print ISSN: 0036-8733
    Electronic ISSN: 1946-7087
    Topics: Biology , Natural Sciences in General , Physics
    Abbreviation: Sci Am
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  • 62
    Publication Date: 2019-02-01
    Description: Despite the importance of deep-sea corals, our current understanding of their ecology and evolution is limited due to difficulties in sampling and studying deep-sea environments. Moreover, a recent re-evaluation of habitat limitations has been suggested after characterization of deep-sea corals in the Red Sea, where they live at temperatures of above 20 °C at low oxygen concentrations. To gain further insight into the biology of deep-sea corals, we produced reference transcriptomes and studied gene expression of three deep-sea coral species from the Red Sea, i.e. Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus typus. Our analyses suggest that deep-sea coral employ mitochondrial hypometabolism and anaerobic glycolysis to manage low oxygen conditions present in the Red Sea. Notably, we found expression of genes related to surface cilia motion that presumably enhance small particle transport rates in the oligotrophic deep-sea environment. This is the first study to characterize transcriptomes and in situ gene expression for deep-sea corals. Our work offers several mechanisms by which deep-sea corals might cope with the distinct environmental conditions present in the Red Sea As such, our data provide direction for future research and further insight to organismal response of deep-sea coral to environmental change and ocean warming.
    Type: Article , PeerReviewed
    Format: text
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  • 63
    Publication Date: 2019-02-01
    Description: The end-Triassic is characterized by one of the largest mass extinctions in the Phanerozoic, coinciding with major carbon cycle perturbations and global warming. It has been suggested that the environmental crisis is linked to widespread sill intrusions during magmatism associated with the Central Atlantic Magmatic Province (CAMP). Sub-volcanic sills are abundant in two of the largest onshore sedimentary basins in Brazil, the Amazonas and Solimões basins, where they comprise up to 20% of the stratigraphy. These basins contain extensive deposits of carbonate and evaporite, in addition to organic-rich shales and major hydrocarbon reservoirs. Here we show that large scale volatile generation followed sill emplacement in these lithologies. Thermal modeling demonstrates that contact metamorphism in the two basins could have generated 88,000 Gt CO2. In order to constrain the timing of gas generation, zircon from two sills has been dated by the U-Pb CA-ID-TIMS method, resulting in 206Pb/238U dates of 201.477 ± 0.062 Ma and 201.470 ± 0.089 Ma. Our findings demonstrate synchronicity between the intrusive phase and the end-Triassic mass extinction, and provide a quantified degassing scenario for one of the most dramatic time periods in the history of Earth.
    Type: Article , PeerReviewed
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  • 64
    Publication Date: 2018-01-05
    Description: There have been decades, such as 2000–2009, when the observed globally averaged surface-temperature time series shows little increase or even a slightly negative trend1 (a hiatus period). However, the observed energy imbalance at the top-of-atmosphere for this recent decade indicates that a net energy flux into the climate system of about 1 W m−2 (refs 2, 3) should be producing warming somewhere in the system4,5. Here we analyse twenty-first-century climate-model simulations that maintain a consistent radiative imbalance at the top-of-atmosphere of about 1 W m−2 as observed for the past decade. Eight decades with a slightly negative global mean surface-temperature trend show that the ocean above 300 m takes up significantly less heat whereas the ocean below 300 m takes up significantly more, compared with non-hiatus decades. The model provides a plausible depiction of processes in the climate system causing the hiatus periods, and indicates that a hiatus period is a relatively common climate phenomenon and may be linked to La Niña-like conditions.
    Type: Article , PeerReviewed
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  • 65
    Publication Date: 2019-02-01
    Description: Microbes associated with deep-sea corals remain poorly studied. The lack of symbiotic algae suggests that associated microbes may play a fundamental role in maintaining a viable coral host via acquisition and recycling of nutrients. Here we employed 16 S rRNA gene sequencing to study bacterial communities of three deep-sea scleractinian corals from the Red Sea, Dendrophyllia sp., Eguchipsammia fistula, and Rhizotrochus typus. We found diverse, species-specific microbiomes, distinct from the surrounding seawater. Microbiomes were comprised of few abundant bacteria, which constituted the majority of sequences (up to 58% depending on the coral species). In addition, we found a high diversity of rare bacteria (taxa at 〈1% abundance comprised 〉90% of all bacteria). Interestingly, we identified anaerobic bacteria, potentially providing metabolic functions at low oxygen conditions, as well as bacteria harboring the potential to degrade crude oil components. Considering the presence of oil and gas fields in the Red Sea, these bacteria may unlock this carbon source for the coral host. In conclusion, the prevailing environmental conditions of the deep Red Sea (〉20 °C, 〈2 mg oxygen L−1) may require distinct functional adaptations, and our data suggest that bacterial communities may contribute to coral functioning in this challenging environment.
    Type: Article , PeerReviewed
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  • 66
    Publication Date: 2019-02-01
    Description: Mid- to late-Holocene sea-level records from low-latitude regions serve as an important baseline of natural variability in sea level and global ice volume prior to the Anthropocene. Here, we reconstruct a high-resolution sea-level curve encompassing the last 6000 years based on a comprehensive study of coral microatolls, which are sensitive low-tide recorders. Our curve is based on microatolls from several islands in a single region and comprises a total of 82 sea-level index points. Assuming thermosteric contributions are negligible on millennial time scales, our results constrain global ice melting to be 1.5–2.5 m (sea-level equivalent) since ~5500 years before present. The reconstructed curve includes isolated rapid events of several decimetres within a few centuries, one of which is most likely related to loss from the Antarctic ice sheet mass around 5000 years before present. In contrast, the occurrence of large and flat microatolls indicates periods of significant sea-level stability lasting up to ~300 years.
    Type: Article , PeerReviewed
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  • 67
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    Nature Publishing Group
    In:  Nature, 275 (5680). pp. 536-538.
    Publication Date: 2018-01-22
    Description: THE Sierra Leone Rise, located in the east equatorial Atlantic, forms a discontinuous chain of seamounts as shallow as 2 km extending with a general NE–SW trend from near the Sierra Leone coast of Africa, to the St Paul fracture zone near the Mid-Atlantic Ridge (Fig. 1). The origin of this feature has remained a topic of discussion. Sheridan et al.1 have hypothesised that the Sierra Leone Rise is a volcanic structure formed at the beginning of the opening of the Atlantic in the early Cretaceous period. The twin features of the Sierra Leone and the Ceara Rises are probably of oceanic origin and were created 80 Myr ago or later in their present-day position with respect to Africa and South America2. The Atlantic ocean exhibits several similar aseismic structures which appear symmetrically oriented with respect to the mid-oceanic ridge, such as the Walvis–Rio Grande Rise and the Iceland Faeroes–Iceland Greenland Ridges. These structures are volcanic edifices having a composition similar to that found in their associated islands3–7. Deep sea drilling of the Ceara Rise8,9 penetrated a basaltic basement of the upper Cretaceous period (Maestrichtian) (Leg 39, Site 354). Similarly, a DSDP hole (Leg 41, Site 366) on the Sierra Leone Rise, penetrated sediments of the same period, without reaching basement10. We report here the discovery of alkali-rich volcanics in an area of the Sierra Leone Rise. The sediment overlying the rock fragments is aged ∼45 Myr.
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  • 68
    Publication Date: 2019-02-01
    Description: The Kryos Basin is a deep-sea hypersaline anoxic basin (DHAB) located in the Eastern Mediterranean Sea (34.98°N 22.04°E). It is filled with brine of re-dissolved Messinian evaporites and is nearly saturated with MgCl2-equivalents, which makes this habitat extremely challenging for life. The strong density difference between the anoxic brine and the overlying oxic Mediterranean seawater impedes mixing, giving rise to a narrow chemocline. Here, we investigate the microbial community structure and activities across the seawater–brine interface using a combined biogeochemical, next-generation sequencing, and lipid biomarker approach. Within the interface, we detected fatty acids that were distinctly 13C-enriched when compared to other fatty acids. These likely originated from sulfide-oxidizing bacteria that fix carbon via the reverse tricarboxylic acid cycle. In the lower part of the interface, we also measured elevated rates of methane oxidation, probably mediated by aerobic methanotrophs under micro-oxic conditions. Sulfate reduction rates increased across the interface and were highest within the brine, providing first evidence that sulfate reducers (likely Desulfovermiculus and Desulfobacula) thrive in the Kryos Basin at a water activity of only ~0.4 Aw. Our results demonstrate that a highly specialized microbial community in the Kryos Basin has adapted to the poly-extreme conditions of a DHAB with nearly saturated MgCl2 brine, extending the known environmental range where microbial life can persist.
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  • 69
    Publication Date: 2019-02-01
    Description: Understanding micro-seismicity is a critical question for earthquake hazard assessment. Since the devastating earthquakes of Izmit and Duzce in 1999, the seismicity along the submerged section of North Anatolian Fault within the Sea of Marmara (comprising the “Istanbul seismic gap”) has been extensively studied in order to infer its mechanical behaviour (creeping vs locked). So far, the seismicity has been interpreted only in terms of being tectonic-driven, although the Main Marmara Fault (MMF) is known to strike across multiple hydrocarbon gas sources. Here, we show that a large number of the aftershocks that followed the M 5.1 earthquake of July, 25th 2011 in the western Sea of Marmara, occurred within a zone of gas overpressuring in the 1.5–5 km depth range, from where pressurized gas is expected to migrate along the MMF, up to the surface sediment layers. Hence, gas-related processes should also be considered for a complete interpretation of the micro-seismicity (~M 〈 3) within the Istanbul offshore domain.
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  • 70
    Publication Date: 2019-02-01
    Description: Far more species of organisms are found in the tropics than in temperate and polar regions, but the evolutionary and ecological causes of this pattern remain controversial1,2. Tropical marine fish communities are much more diverse than cold-water fish communities found at higher latitudes3,4, and several explanations for this latitudinal diversity gradient propose that warm reef environments serve as evolutionary ‘hotspots’ for species formation5,6,7,8. Here we test the relationship between latitude, species richness and speciation rate across marine fishes. We assembled a time-calibrated phylogeny of all ray-finned fishes (31,526 tips, of which 11,638 had genetic data) and used this framework to describe the spatial dynamics of speciation in the marine realm. We show that the fastest rates of speciation occur in species-poor regions outside the tropics, and that high-latitude fish lineages form new species at much faster rates than their tropical counterparts. High rates of speciation occur in geographical regions that are characterized by low surface temperatures and high endemism. Our results reject a broad class of mechanisms under which the tropics serve as an evolutionary cradle for marine fish diversity and raise new questions about why the coldest oceans on Earth are present-day hotspots of species formation.
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  • 71
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    Nature Publishing Group
    In:  Nature Geoscience, 11 (7). p. 462.
    Publication Date: 2019-02-01
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  • 72
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    Nature Publishing Group
    In:  Nature Geoscience, 11 (7). pp. 467-473.
    Publication Date: 2019-02-01
    Description: Direct observations indicate that the global ocean oxygen inventory is decreasing. Climate models consistently confirm this decline and predict continuing and accelerating ocean deoxygenation. However, current models (1) do not reproduce observed patterns for oxygen changes in the ocean’s thermocline; (2) underestimate the temporal variability of oxygen concentrations and air–sea fluxes inferred from time-series observations; and (3) generally simulate only about half the oceanic oxygen loss inferred from observations. We here review current knowledge about the mechanisms and drivers of oxygen changes and their variation with region and depth over the world’s oceans. Warming is considered a major driver: in part directly, via solubility effects, and in part indirectly, via changes in circulation, mixing and oxygen respiration. While solubility effects have been quantified and found to dominate deoxygenation near the surface, a quantitative understanding of contributions from other mechanisms is still lacking. Current models may underestimate deoxygenation because of unresolved transport processes, unaccounted for variations in respiratory oxygen demand, or missing biogeochemical feedbacks. Dedicated observational programmes are required to better constrain biological and physical processes and their representation in models to improve our understanding and predictions of patterns and intensity of future oxygen change.
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  • 73
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    Nature Publishing Group
    In:  Scientific Reports, 8 (13015).
    Publication Date: 2019-02-01
    Description: What process triggered the Mediterranean Sea restriction remains debated since the discovery of the Messinian Salinity Crisis (MSC). Recent hypotheses infer that the MSC initiated after the closure of the Atlantic-Mediterranean Betic and Rifean corridors, being modulated through restriction at the Gibraltar Strait. These hypotheses however, do not integrate contemporaneous speciation patterns of the faunal exchange between Iberia and Africa and geological features like the evaporite distribution. Exchange of terrestrial biota occurred before, during and after the MSC, and speciation models support an exchange path across the East Alborán basin (EAB) located a few hundreds of km east of the Gibraltar Strait. Yet, a structure explaining jointly geological and biological observations has remained undiscovered. We present new seismic data showing the velocity structure of a well-differentiated 14-17-km thick volcanic arc in the EAB. Isostatic considerations support that the arc-crust buoyancy created an archipelago and filter bridge across the EAB. Sub-aerial erosional unconformities and onlap relationships support that the arc was active between ~10-6 Ma. Progressive arc build-up leading to an archipelago and its later subsidence can explain the extended exchange of terrestrial biota between Iberia and Africa (~7-3 Ma), and agrees with patterns of biota speciation and terrestrial fossil distribution before the MSC (10-6.2 Ma). In this scenario, the West Alboran Basin (WAB) could then be the long-postulated open-marine refuge for the Mediterranean taxa that repopulated the Mediterranean after the MSC, connected to the deep restricted Mediterranean basin through a sill at the Alboran volcanic arc archipelago.
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  • 74
    Publication Date: 2019-02-01
    Description: The island of Bali in Indonesia is home to two active stratovolcanoes, Agung and Batur, but relatively little is known of their underlying magma plumbing systems. Here we define magma storage depths and isotopic evolution of the 1963 and 1974 eruptions using mineral-melt equilibrium thermobarometry and oxygen and helium isotopes in mineral separates. Olivine crystallised from a primitive magma and has average δ18O values of 4.8‰. Clinopyroxene records magma storage at the crust-mantle boundary, and displays mantle-like isotope values for Helium (8.62 RA) and δ18O (5.0–5.8‰). Plagioclase reveals crystallisation in upper crustal storage reservoirs and shows δ18O values of 5.5–6.4‰. Our new thermobarometry and isotope data thus corroborate earlier seismic and InSAR studies that inferred upper crustal magma storage in the region. This type of multi-level plumbing architecture could drive replenishing magma to rapid volatile saturation, thus increasing the likelihood of explosive eruptions and the consequent hazard potential for the population of Bali.
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  • 75
    Publication Date: 2019-02-01
    Description: Proxy-based indicators of past climate change show that current global climate models systematically underestimate Holocene-epoch climate variability on centennial to multi-millennial timescales, with the mismatch increasing for longer periods1,2,3,4,5. Proposed explanations for the discrepancy include ocean–atmosphere coupling that is too weak in models6, insufficient energy cascades from smaller to larger spatial and temporal scales7, or that global climate models do not consider slow climate feedbacks related to the carbon cycle or interactions between ice sheets and climate4. Such interactions, however, are known to have strongly affected centennial- to orbital-scale climate variability during past glaciations8,9,10,11, and are likely to be important in future climate change12,13,14. Here we show that fluctuations in Antarctic Ice Sheet discharge caused by relatively small changes in subsurface ocean temperature can amplify multi-centennial climate variability regionally and globally, suggesting that a dynamic Antarctic Ice Sheet may have driven climate fluctuations during the Holocene. We analysed high-temporal-resolution records of iceberg-rafted debris derived from the Antarctic Ice Sheet, and performed both high-spatial-resolution ice-sheet modelling of the Antarctic Ice Sheet and multi-millennial global climate model simulations. Ice-sheet responses to decadal-scale ocean forcing appear to be less important, possibly indicating that the future response of the Antarctic Ice Sheet will be governed more by long-term anthropogenic warming combined with multi-centennial natural variability than by annual or decadal climate oscillations.
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  • 76
    Publication Date: 2019-02-01
    Description: Prochlorococcus and Synechococcus are the dominant primary producers in marine ecosystems and perform a significant fraction of ocean carbon fixation. These cyanobacteria interact with a diverse microbial community that coexists with them. Comparative genomics of cultivated isolates has helped address questions regarding patterns of evolution and diversity among microbes, but the fraction that can be cultivated is miniscule compared to the diversity in the wild. To further probe the diversity of these groups and extend the utility of reference sequence databases, we report a data set of single cell genomes for 489 Prochlorococcus, 50 Synechococcus, 9 extracellular virus particles, and 190 additional microorganisms from a diverse range of bacterial, archaeal, and viral groups. Many of these uncultivated single cell genomes are derived from samples obtained on GEOTRACES cruises and at well-studied oceanographic stations, each with extensive suites of physical, chemical, and biological measurements. The genomic data reported here greatly increases the number of available Prochlorococcus genomes and will facilitate studies on evolutionary biology, microbial ecology, and biological oceanography.
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  • 77
    Publication Date: 2019-01-10
    Description: Ice sheets are currently ignored in global methane budgets1,2. Although ice sheets have been proposed to contain large reserves of methane that may contribute to a rise in atmospheric methane concentration if released during periods of rapid ice retreat3,4, no data exist on the current methane footprint of ice sheets. Here we find that subglacially produced methane is rapidly driven to the ice margin by the efficient drainage system of a subglacial catchment of the Greenland ice sheet. We report the continuous export of methane-supersaturated waters (CH4(aq)) from the ice-sheet bed during the melt season. Pulses of high CH4(aq) concentration coincide with supraglacially forced subglacial flushing events, confirming a subglacial source and highlighting the influence of melt on methane export. Sustained methane fluxes over the melt season are indicative of subglacial methane reserves that exceed methane export, with an estimated 6.3 tonnes (discharge-weighted mean; range from 2.4 to 11 tonnes) of CH4(aq) transported laterally from the ice-sheet bed. Stable-isotope analyses reveal a microbial origin for methane, probably from a mixture of inorganic and ancient organic carbon buried beneath the ice. We show that subglacial hydrology is crucial for controlling methane fluxes from the ice sheet, with efficient drainage limiting the extent of methane oxidation5 to about 17 per cent of methane exported. Atmospheric evasion is the main methane sink once runoff reaches the ice margin, with estimated diffusive fluxes (4.4 to 28 millimoles of CH4 per square metre per day) rivalling that of major world rivers6. Overall, our results indicate that ice sheets overlie extensive, biologically active methanogenic wetlands and that high rates of methane export to the atmosphere can occur via efficient subglacial drainage pathways. Our findings suggest that such environments have been previously underappreciated and should be considered in Earth’s methane budget.
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  • 78
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    Nature Publishing Group
    In:  Nature Geoscience, 12 . pp. 84-86.
    Publication Date: 2019-01-29
    Description: Atmospheric levels of chloroform, an ozone-depleting substance not part of the Montreal Protocol, have risen. The increase may be attributable to industrial emissions in Eastern China
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  • 79
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    Nature Publishing Group
    In:  The ISME Journal, 9 (3). pp. 735-745.
    Publication Date: 2019-01-17
    Description: Ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) is a key enzyme of the Calvin cycle, which is responsible for most of Earth's primary production. Although research on RubisCO genes and enzymes in plants, cyanobacteria and bacteria has been ongoing for years, still little is understood about its regulation and activation in bacteria. Even more so, hardly any information exists about the function of metagenomic RubisCOs and the role of the enzymes encoded on the flanking DNA owing to the lack of available function-based screens for seeking active RubisCOs from the environment. Here we present the first solely activity-based approach for identifying RubisCO active fosmid clones from a metagenomic library. We constructed a metagenomic library from hydrothermal vent fluids and screened 1056 fosmid clones. Twelve clones exhibited RubisCO activity and the metagenomic fragments resembled genes from Thiomicrospira crunogena. One of these clones was further analyzed. It contained a 35.2 kb metagenomic insert carrying the RubisCO gene cluster and flanking DNA regions. Knockouts of twelve genes and two intergenic regions on this metagenomic fragment demonstrated that the RubisCO activity was significantly impaired and was attributed to deletions in genes encoding putative transcriptional regulators and those believed to be vital for RubisCO activation. Our new technique revealed a novel link between a poorly characterized gene and RubisCO activity. This screen opens the door to directly investigating RubisCO genes and respective enzymes from environmental samples.
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  • 80
    Publication Date: 2019-02-01
    Description: Brachiopod shells are the most widely used geological archive for the reconstruction of the temperature and the oxygen isotope composition of Phanerozoic seawater. However, it is not conclusive whether brachiopods precipitate their shells in thermodynamic equilibrium. In this study, we investigated the potential impact of kinetic controls on the isotope composition of modern brachiopods by measuring the oxygen and clumped isotope compositions of their shells. Our results show that clumped and oxygen isotope compositions depart from thermodynamic equilibrium due to growth rate-induced kinetic effects. These departures are in line with incomplete hydration and hydroxylation of dissolved CO2. These findings imply that the determination of taxon-specific growth rates alongside clumped and bulk oxygen isotope analyses is essential to ensure accurate estimates of past ocean temperatures and seawater oxygen isotope compositions from brachiopods.
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  • 81
    Publication Date: 2019-02-14
    Description: Extratropical volcanic eruptions are commonly thought to be less effective at driving large-scale surface cooling than tropical eruptions. However, recent minor extratropical eruptions have produced a measurable climate impact, and proxy records suggest that the most extreme Northern Hemisphere cold period of the Common Era was initiated by an extratropical eruption in 536 CE. Using ice-core-derived volcanic stratospheric sulfur injections and Northern Hemisphere summer temperature reconstructions from tree rings, we show here that in proportion to their estimated stratospheric sulfur injection, extratropical explosive eruptions since 750 CE have produced stronger hemispheric cooling than tropical eruptions. Stratospheric aerosol simulations demonstrate that for eruptions with a sulfur injection magnitude and height equal to that of the 1991 Mount Pinatubo eruption, extratropical eruptions produce time-integrated radiative forcing anomalies over the Northern Hemisphere extratropics up to 80% greater than tropical eruptions, as decreases in aerosol lifetime are overwhelmed by the enhanced radiative impact associated with the relative confinement of aerosol to a single hemisphere. The model results are consistent with the temperature reconstructions, and elucidate how the radiative forcing produced by extratropical eruptions is strongly dependent on the eruption season and sulfur injection height within the stratosphere.
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  • 82
    Publication Date: 2019-02-26
    Description: A 20-Myr record of creation of oceanic lithosphere is exposed along a segment of the central Mid-Atlantic Ridge on an uplifted sliver of lithosphere. The degree of melting of the mantle that is upwelling below the ridge, estimated from the chemistry of the exposed mantle rocks, as well as crustal thickness inferred from gravity measurements, show oscillations of ∼3–4 Myr superimposed on a longer-term steady increase with time. The time lag between oscillations of mantle melting and crustal thickness indicates that the mantle is upwelling at an average rate of ∼25 mm yr-1, but this appears to vary through time. Slow-spreading lithosphere seems to form through dynamic pulses of mantle upwelling and melting, leading not only to along-axis segmentation but also to across-axis structural variability. Also, the central Mid-Atlantic Ridge appears to have become steadily hotter over the past 20 Myr, possibly owing to north–south mantle flow.
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  • 83
    Publication Date: 2019-02-27
    Description: Predictive species distribution models are mostly based on statistical dependence between environmental and distributional data and therefore may fail to account for physiological limits and biological interactions that are fundamental when modelling species distributions under future climate conditions. Here, we developed a state-of-the-art method integrating biological theory with survey and experimental data in a way that allows us to explicitly model both physical tolerance limits of species and inherent natural variability in regional conditions and thereby improve the reliability of species distribution predictions under future climate conditions. By using a macroalga-herbivore association (Fucus vesiculosus - Idotea balthica) as a case study, we illustrated how salinity reduction and temperature increase under future climate conditions may significantly reduce the occurrence and biomass of these important coastal species. Moreover, we showed that the reduction of herbivore occurrence is linked to reduction of their host macroalgae. Spatial predictive modelling and experimental biology have been traditionally seen as separate fields but stronger interlinkages between these disciplines can improve species distribution projections under climate change. Experiments enable qualitative prior knowledge to be defined and identify cause-effect relationships, and thereby better foresee alterations in ecosystem structure and functioning under future climate conditions that are not necessarily seen in projections based on non-causal statistical relationships alone.
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