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  • Animal communication
  • National Academy of Sciences  (1)
  • Woods Hole Oceanographic Institution  (1)
  • 1
    Publication Date: 2022-05-25
    Description: Author Posting. © National Academy of Sciences, 2006. This article is posted here by permission of National Academy of Sciences for personal use, not for redistribution. The definitive version was published in Proceedings of the National Academy of Sciences 103 (2006): 3675-3680, doi:10.1073/pnas.0600160103.
    Description: We investigated whether the evolution of electric organs and electric signal diversity in two independently evolved lineages of electric fishes was accompanied by convergent changes on the molecular level. We found that a sodium channel gene (Nav1.4a) that is expressed in muscle in nonelectric fishes has lost its expression in muscle and is expressed instead in the evolutionarily novel electric organ in both lineages of electric fishes. This gene appears to be evolving under positive selection in both lineages, facilitated by its restricted expression in the electric organ. This view is reinforced by the lack of evidence for selection on this gene in one electric species in which expression of this gene is retained in muscle. Amino acid replacements occur convergently in domains that influence channel inactivation, a key trait for shaping electric communication signals. Some amino acid replacements occur at or adjacent to sites at which disease-causing mutations have been mapped in human sodium channel genes, emphasizing that these replacements occur in functionally important domains. Selection appears to have acted on the final step in channel inactivation, but complementarily on the inactivation "ball" in one lineage, and its receptor site in the other lineage. Thus, changes in the expression and sequence of the same gene are associated with the independent evolution of signal complexity.
    Description: This work was funded by National Institutes of Health Grant R01 NS025513 (to H.H.Z. and Y.L.) and National Science Foundation Integrative Graduate Education and Research Traineeship Program DGE-0114387 (to D.J.Z. and D.M.H.).
    Keywords: Animal communication ; Electric organ ; Channel inactivation ; Protein evolution ; Positive selection
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: 1274184 bytes
    Format: application/pdf
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  • 2
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    Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Software tools were designed to characterize the acoustic features of marine animal sounds. These have resulted in a set of calculated measurements that summarize particular aspects of sound sequences. The specificity of these measurements was enhanced by adjusting calculations to compensate for ambient noise. The sound measures included statistics for Aggregate Bandwidth, Intensity, Duration, Amplitude Modulation, Frequency Modulation, Short-term Bandwidth, Center Frequency, and Amplitude Frequency Interaction. The efficacy of noise compensation was tested for each statistic. Then, the sound measures were tested on a subset of 200 sequences of marine animal sounds, including sequences from 20 species: six baleen whales, 13 toothed species, and one seal. The statistics were reviewed for each species and a graphical comparison of all species was generated using principal components analysis. Preliminary results confirm that such sounds can be classified by means of relatively simple statistical algorithms, and we are encouraged to continue toward a system for automatic classification of marine animal sounds.
    Description: Funding was provided by NAVSEA under Contract No. N00140-90-D-1979 and a series of contracts and grants by ONR including Grant N00014-91-J-1445 with supplemental support by NOARL and ORINCON/DARPA.
    Keywords: Animal communication ; Animal sounds
    Repository Name: Woods Hole Open Access Server
    Type: Technical Report
    Format: application/pdf
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