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  • Protein Conformation
  • American Association for the Advancement of Science (AAAS)  (17)
  • American Meteorological Society (AMS)
  • American Chemical Society (ACS)
  • 1975-1979  (17)
Collection
Publisher
  • American Association for the Advancement of Science (AAAS)  (17)
  • American Meteorological Society (AMS)
  • American Chemical Society (ACS)
Years
Year
  • 1
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1979-03-30
    Description: Human erythrocytes have been freeze-fractured, and the polypeptides associated with the separate halves of the membrane bilayer have been analyzed by sodium dodecyl sulfate polyacrylamide gel electrophoresis. The transmembrane proteins were differentially separated by the fracture process. Although sialoglycoproteins associated with the outer half of the membrane, the anion transport protein (band 3) mainly remained with the inner half of the membrane. Well-defined fragments of the sialoglycoproteins were produced by the freeze-fracture procedure, indicating that selected covalent bonds of these transmembrane proteins were broken.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Edwards, H H -- Mueller, T J -- Morrison, M -- New York, N.Y. -- Science. 1979 Mar 30;203(4387):1343-6.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/424755" target="_blank"〉PubMed〈/a〉
    Keywords: Erythrocyte Membrane/*ultrastructure ; Erythrocytes/*ultrastructure ; Freeze Fracturing/methods ; Glycoproteins/blood ; Humans ; Macromolecular Substances ; *Membrane Proteins/blood ; Molecular Weight ; Polylysine ; Protein Binding ; Protein Conformation
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  • 2
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1979-11-30
    Description: The tertiary structures of all liganded hemoglobins in the R state differ in detail. Steric hindrance arising from nonbonded ligand-globin interactions affects the binding of ligands such as CO and cyanide which preferentially form linear axial complexes to heme; these ligands bind in a strained off-axis configuration. Ligands such as O2 and NO, which preferentially form bent complexes, encounter less steric hindrance and can bind in their (preferred) unstrained configuration. Linear complexes distort the ligand pockets in the R state (and by inference, in the T state) more than bent complexes. These structural differences between linear and bent complexes are reflected in the kinetic behavior of hemoglobin. Structural interpretation of this kinetic behavior indicates that the relative contributions of nonbonded ligand-globin interactions and nonbonded heme interactions to transition state free energies differ for linear and bent ligands. The relative contributions of these interactions to the free energy of cooperativity may also differ for linear and bent ligands. Thus the detailed molecular mechanism by which the affinity of heme is regulated differs for different ligands.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Moffat, K -- Deatherage, J F -- Seybert, D W -- New York, N.Y. -- Science. 1979 Nov 30;206(4422):1035-42.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/493990" target="_blank"〉PubMed〈/a〉
    Keywords: Allosteric Regulation ; Animals ; Heme/*metabolism ; Hemoglobins/metabolism ; Horses ; Kinetics ; Ligands ; Oxygen/*metabolism ; Oxyhemoglobins/*metabolism ; Protein Conformation ; Stereoisomerism ; Structure-Activity Relationship
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  • 3
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1979-04-27
    Description: Space-filling models of yeast hexokinase, adenylate kinase, and phosphoglycerate kinase drawn by computer clearly portray the bilobal character of these phosphoryl transfer enzymes, and the deep cleft which is formed between the lobes. A dramatic conformational change occurs in hexokinase as glucose binds to the bottom of the cleft, which causes the two lobes of hexokinase to come together. A substrate-induced closing of the active site cleft is postulated to occur in other kinases as well. This change may provide a mechanism by which some of these enzymes reduce their inherent adenosine triphosphatase activity and could be a general requirement of the kinase reaction.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Anderson, C M -- Zucker, F H -- Steitz, T A -- New York, N.Y. -- Science. 1979 Apr 27;204(4391):375-80.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/220706" target="_blank"〉PubMed〈/a〉
    Keywords: Adenylate Kinase ; Binding Sites ; Catalysis ; Hexokinase ; Models, Molecular ; Phosphoglycerate Kinase ; *Phosphotransferases ; Protein Conformation ; Saccharomyces cerevisiae/enzymology ; Structure-Activity Relationship
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  • 4
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1979-04-20
    Description: Infrared absorption of purple membrane reveals an amide I frequency that falls outside the range normally found for alpha helices. This may indicate along with x-ray diffraction the existence of bacteriorhodopsin alpha helices with unusual structure.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Rothschild, K J -- Clark, N A -- New York, N.Y. -- Science. 1979 Apr 20;204(4390):311-2.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/432645" target="_blank"〉PubMed〈/a〉
    Keywords: Amides ; *Bacteriorhodopsins ; *Carotenoids ; Deuterium ; Halobacterium/ultrastructure ; Membrane Proteins ; Protein Conformation ; Spectrophotometry, Infrared
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  • 5
    Publication Date: 1979-07-13
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Blundell, T L -- Hearn, L -- Tickle, I J -- Palmer, R A -- Morgan, B A -- Smith, G D -- Griffin, J F -- New York, N.Y. -- Science. 1979 Jul 13;205(4402):220.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/451597" target="_blank"〉PubMed〈/a〉
    Keywords: Crystallography ; *Endorphins ; *Enkephalins ; Protein Conformation
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  • 6
    Publication Date: 1979-09-21
    Description: The bis-acridine ring system forms the basis for new biophysical probes of novel stereochemistry. Spectral data indicate that certain alkylene bridged bis-9-aminoacridines have a parallel plane conformation of predictable interplane distance. The parallel plane conformation is independent of solvent and thus is different from nucleic acid systems. This stable conformation allows these compounds to be used as sensitive "rulers" for describing binding site geometry in cholinergic enzymes and in the delineation of the mechanism of allosteric control in acetylcholinesterase.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Himel, C M -- Taylor, J L -- Pape, C -- Millar, D B -- Christopher, J -- Kurlansik, L -- New York, N.Y. -- Science. 1979 Sep 21;205(4412):1277-9.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/472743" target="_blank"〉PubMed〈/a〉
    Keywords: *Acetylcholinesterase/metabolism ; *Acridines ; Binding Sites ; Kinetics ; Molecular Conformation ; Phosphorylation ; Protein Conformation ; Spectrophotometry, Ultraviolet
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  • 7
    Publication Date: 1979-01-12
    Description: Human and mouse hypoxanthine-guanine phosphoribosyltransferase subunits combine to form an active heteropolymer. Dimers form the basic subunit structure of the enzymes, yet the dimers can readily associate to form tetramers. The equilibrium between dimers and tetramers is significantly influenced by the ionic strength of the enzyme solvent.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Johnson, G G -- Eisenberg, L R -- Migeon, B R -- New York, N.Y. -- Science. 1979 Jan 12;203(4376):174-6.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/569362" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Cell Line ; Female ; Genetic Linkage ; Humans ; Hybrid Cells/enzymology ; *Hypoxanthine Phosphoribosyltransferase/genetics ; Macromolecular Substances ; Mice ; Molecular Weight ; Protein Conformation ; X Chromosome
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  • 8
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1979-11-02
    Description: The absolute affinities of amino acid side chains for solvent water closely match their relative distributions between the surface and the interior of native proteins and are associated with a remarkable bias in the genetic code.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Wolfenden, R V -- Cullis, P M -- Southgate, C C -- New York, N.Y. -- Science. 1979 Nov 2;206(4418):575-7.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/493962" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acids/*genetics ; *Genetic Code ; Mutation ; Protein Conformation ; Solubility ; Thermodynamics ; Water
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  • 9
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1978-07-21
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Marx, J L -- New York, N.Y. -- Science. 1978 Jul 21;201(4352):243-4.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/663653" target="_blank"〉PubMed〈/a〉
    Keywords: Ferritins ; Hemoglobins ; Ligands ; *Metalloproteins ; Molybdenum ; Nitrogenase ; Oxyhemoglobins ; *Particle Accelerators ; Protein Conformation ; Spectrophotometry, Atomic/methods
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  • 10
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1978-03-10
    Description: Incubation of ribonuclease with 0.1M mercaptoethanol at pH 8.5 can increase the enzyme's hydrolytic activity toward cytidine 2',3'-monophosphate (cyclic CMP) under standard assay conditions. Cation-exchange chromatography of the ribonuclease-thiol reaction mixture revealed seven fractions. The fraction with the highest activity had an approximate tenfold decrease in the apparent Michaelis constant for cyclic CMP with respect to native ribonuclease. The enhanced activity is a metastable property since this fraction reverts back to the control activity and chromatographic behavior of native ribonuclease on standing in solution at room temperature.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Watkins, J B -- Benz, F W -- New York, N.Y. -- Science. 1978 Mar 10;199(4333):1084-7.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/564548" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Cattle ; Disulfides/pharmacology ; Enzyme Activation/drug effects ; Glutathione/pharmacology ; Kinetics ; Mercaptoethanol/*pharmacology ; Oxidation-Reduction ; Pancreas/enzymology ; Protein Conformation ; Ribonucleases/*metabolism ; Structure-Activity Relationship
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  • 11
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1978-06-02
    Description: Biological organization may be viewed as consisting of two stages: biosynthesis and assembly. The assembly process is largely under thermodynamic control; that is, as a first approximation it represents a search by each structural molecule for its state of lowest chemical potential. The hydrophobic effect is a unique organizing force, based on repulsion by the solvent instead of attractive forces at the site of organization. It is responsible for assembly of membranes of cells and intracellular compartments, and the absence of strong attractive forces makes the membranes fluid and deformable. The spontaneous folding of proteins, however, involves directed polar bonds, leading to more rigid structures. Intercellular organization probably involves polar bonds between cell surface proteins.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Tanford, C -- New York, N.Y. -- Science. 1978 Jun 2;200(4345):1012-8.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/653353" target="_blank"〉PubMed〈/a〉
    Keywords: Cell Compartmentation ; Cells/*ultrastructure ; Chemistry, Physical ; Membrane Proteins ; Membranes/ultrastructure ; Micelles ; *Models, Biological ; Phospholipids ; Physicochemical Phenomena ; Protein Conformation ; Solubility ; *Thermodynamics ; Water
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  • 12
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1978-02-03
    Description: Small-angle x-ray and neutron diffraction patterns have been obtained from the annulus fibrosus of porcine intervertebral disk. These show that the collagen in this tissue is modified compared with that in tendon.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Berthet, C -- Hulmes, D J -- Miller, A -- Timmins, P A -- New York, N.Y. -- Science. 1978 Feb 3;199(4328):547-9.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/622556" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Collagen ; Glycosaminoglycans ; Intervertebral Disc/*ultrastructure ; Neutrons ; Protein Conformation ; Proteoglycans ; Scattering, Radiation ; Swine ; X-Ray Diffraction
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  • 13
    Publication Date: 1978-04-28
    Description: Succinyl derivatives of gramicidin were tested for their ability to form channels in planar artificial lipid bilayers. Both N-succinyldeformylgramicidin methyl ester and charged O-succinylgramicidin formed channels, but the channels had markedly different sizes and lifetimes. This implies that gramicidin forms channels by end-to-end association. However, the doubly charged N,O-bissuccinyldeformylgramicidin was inactive, which suggests that only end-to-end association of gramicidin may result in channel formation.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Bradley, R J -- Urry, D W -- Okamoto, K -- Rapaka, R -- New York, N.Y. -- Science. 1978 Apr 28;200(4340):435-7.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/77040" target="_blank"〉PubMed〈/a〉
    Keywords: Electric Conductivity ; *Gramicidin ; Hydrogen Bonding ; Ionophores ; Membranes, Artificial ; Protein Conformation ; Structure-Activity Relationship
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  • 14
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    American Association for the Advancement of Science (AAAS)
    Publication Date: 1978-09-29
    Description: Electrostatic effects dominate many aspects of protein behavior. When polypeptide chains fold up, most polar side chains seek the exterior, where they can be solvated. Water bound in the interior has been found between the domains of enzymes of the chymotrypsin family, and between the subunits of hemoglobin and tobacco mosaic virus protein. Assembly of this protein from disk to virus is triggered by electrostatic interactions between neighboring subunits. Lysozyme stabilizes the constellation of charges involved in the transition state of its substrate by both permanent and induced dipoles. All factors that lower the oxygen affinity of hemoglobin act by strengthening the salt bridges that constrain its quaternary deoxy (T) structure. Enzymes of thermophile bacteria owe their extra stability mostly to additional salt bridges. The rate of denaturation of hemoglobins by alkali is determined by the ionization of internal side chains with pK's of about 12.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Perutz, M F -- New York, N.Y. -- Science. 1978 Sep 29;201(4362):1187-91.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/694508" target="_blank"〉PubMed〈/a〉
    Keywords: Allosteric Regulation ; Amino Acid Sequence ; Catalysis ; Ions ; Macromolecular Substances ; Protein Conformation ; Protein Denaturation ; *Proteins ; Salts ; Structure-Activity Relationship ; Temperature ; Viruses/ultrastructure ; Water
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  • 15
    Publication Date: 1978-01-20
    Description: Application of information derived from a three-dimensional model of vasopressin bound to its antidiuretic receptor has resulted in the design and synthesis of a potent analog, [1-deamino, 2-phenylalanine, 7-(3,4-dehydroproline)]-arginine vasopressin; this analog has a specific antidiuretic activity of 13,000 +/- 1,250 units per milligram; noteworthy at these doses is the absence of any detectable pressor activity. Three modifications based on conformational considerations were introduced into the vasopressin molecule in preparing the analog: (i) to enhance binding, a double bond was introduced into the side chain of an amino acid residue occupying a corner position of a beta turn in the vasopressin conformation, (ii) the hydroxyl moiety was deleted from Tyr2, and (iii) to tighten the backbone structure and to enhance the enzymatic resistance of the analog, the NH2-terminal amino group was deleted.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Smith, C W -- Walter, R -- New York, N.Y. -- Science. 1978 Jan 20;199(4326):297-9.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/619455" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Sequence ; Deamino Arginine Vasopressin/analogs & derivatives ; Diuresis/drug effects ; Heart Rate/drug effects ; Protein Conformation ; Structure-Activity Relationship ; Vasopressins/*analogs & derivatives/pharmacology
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  • 16
    Publication Date: 1978-02-10
    Description: Covalent light chain dimers (L2) and cysteine-blocked L chain monomers readily react with partially reduced heavy (H) chains. A rapid disappearance of these blocked L chain species is followed by the appearance of covalent intermediates-HL, H2, and H2L-leading to fully assembled H2L2. The mechanism of initial disulfide bond formation between heavy and light chains is disulfide interchange.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Kazin, A R -- Beychok, S -- New York, N.Y. -- Science. 1978 Feb 10;199(4329):688-90.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/415360" target="_blank"〉PubMed〈/a〉
    Keywords: Bence Jones Protein/metabolism ; Cysteine/metabolism ; Disulfides ; Humans ; *Immunoglobulin G/biosynthesis ; *Immunoglobulin Heavy Chains/biosynthesis ; *Immunoglobulin Light Chains/biosynthesis ; *Immunoglobulin gamma-Chains/biosynthesis ; *Immunoglobulin kappa-Chains/biosynthesis ; In Vitro Techniques ; Oxidation-Reduction ; Protein Conformation
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  • 17
    Publication Date: 1978-03-17
    Description: The conformation of [Leu5]enkephalin is produced by a Tyr-Gly-Gly-Phe beta bend stabilized by antiparallel hydrogen bonding between tyrosine and phenylalanine. On the basis of a comparison of the observed structure with the structure of known opiate agonists, three hydrophilic and two hydrophobic regions have been identified as contributing to the recognition of the molecule at the opiate receptor site.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Smith, D -- Griffin, J F -- New York, N.Y. -- Science. 1978 Mar 17;199(4334):1214-6.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/204006" target="_blank"〉PubMed〈/a〉
    Keywords: *Endorphins/metabolism ; *Enkephalins/metabolism ; Hydrogen Bonding ; Models, Molecular ; Morphine ; Protein Conformation ; Receptors, Opioid/metabolism ; Structure-Activity Relationship ; X-Ray Diffraction
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