ALBERT

Description: Legionella pneumophila is naturally found in fresh water were the bacteria parasitize within protozoa. It also survives planctonically in water or biofilms. Upon aerosol formation via man-made water systems, L. pneumophila can enter the human lung and cause a severe form of pneumonia, called Legionnaires’ disease. The pathogenesis of Legionnaires’ disease is largely due to the ability of L. pneumophila to invade and grow within macrophages. An important characteristic of the intracellular survival strategy is the replication within the host vacuole that does not fuse with endosomes or lysosomes. In recent times a great number of bacterial virulence factors which affect growth of L. pneumophila in both macrophages and protozoa have been identified. The ongoing Legionella genome project and the use of genetically tractable surrogate hosts are expected to significantly contribute to the understanding of bacterium–host interactions and the regulation of virulence traits during the infection cycle. Since person-to-person transmission of legionellosis has never been observed, the measures for disease prevention have concentrated on eliminating the pathogen from water supplies. In this respect detection and analysis of Legionella in complex environmental consortia become increasingly important. With the availability of new molecular tools this area of applied research has gained new momentum.

Description: A PCR protocol for the detection of sulfur-oxidizing bacteria based on soxB genes that are essential for thiosulfate oxidation by sulfur-oxidizing bacteria of various phylogenetic groups which use the 'Paracoccus sulfur oxidation' pathway was developed. Five degenerate primers were used to specifically amplify fragments of soxB genes from different sulfur-oxidizing bacteria previously shown to oxidize thiosulfate. The PCR yielded a soxB fragment of approximately 1000 bp from most of the bacteria. Amino acid and nucleotide sequences of soxB from reference strains as well as from new isolates and environmental DNA from a hydrothermal vent habitat in the North Fiji Basin were compared and used to infer relationships of soxB between sulfur-oxidizing bacteria belonging to various 16S rDNA-based phylogenetic groups. Major phylogenetic lines derived from 16S rDNA were confirmed by soxB phylogeny. Thiosulfate-oxidizing green sulfur bacteria formed a coherent group by their soxB sequences. Likewise, clearly separated branches demonstrated the distant relationship of representatives of alpha-, beta-, and gamma-Proteobacteria including representative species of the former genus Thiobacillus (now Halothiobacillus - gamma-Proteobacteria, Thiobacillus - beta-Proteobacteria and Starkeya - alpha-Proteobacteria). This general picture emerged although apparent evidence for lateral transfer of the soxB gene is indicated and comparison of soxB phylogeny and 16S rDNA phylogeny points to the significance of this gene transfer in hydrothermal vent bacterial communities of the North Fiji Basin.

Description: Modern models for the development and evolution of the geochemical heterogeneity in the Earth's mantle and the genesis of mantle magmas attach much importance to the processes of interaction between deepseated rocks and metasomatic fluids, which are able, when occurring under mantle conditions, to dissolve significant amounts of major and trace elements (see, for example, [1]). Fluorine is one of the major anions of natural fluids and also one of the principal complex-forming ligands of several metals. To evaluate the possible role of fluorine in the processes of mantle magma genesis and to identify the source of this element in natural magmas in various geodynamic environments, it is necessary to know the fluorine concentration in primitive mantle melts. These data are still relatively scarce, particularly for low alkaline magmas [2-4]. The fluorine concentrations in magmas from suprasubduction zones, whose genesis is largely controlled by the interaction between mantle rocks and fluids, remain poorly known and need further refinement. Data presented in this paper are among the first to characterize the concentrations of fluorine in primitive magmas of suprasubduction zones. These data were obtained by secondary ion mass spectrometry of chill glasses from the lava complex of the Troodos ophiolites in Cyprus. Along with information on the concentrations of major and trace elements, H2O, and Cl in the glasses, our results make it possible to utilize the example of the Troodos ophiolites to characterize the main regularities in the geochemistry of fluorine during the origin of magmas above subduction zones and to assay the contributions of various components that participated in the processes of mantle melting. These data are among the first to demonstrate that subduction-related melts became enriched in F relative to LREE.

Description: As offshore petroleum exploration and development move into deeper water, industry must contend increasingly with gas hydrate, a solid compound that binds water and a low-molecular-weight gas (usually methane). Gas hydrate has been long studied in industry from an engineering viewpoint, due to its tendency to clog gas pipelines. However, hydrate also occurs naturally wherever there are high pressures, low temperatures, and sufficient concentrations of gas and water. These conditions prevail in two natural environments, both of which are sites of active exploration: permafrost regions and marine sediments on continental slopes. In this article we discuss seismic detection of gas hydrate in marine sediments. Gas hydrate in deepwater sediments poses both new opportunities and new hazards. An enormous quantity of natural gas, likely far exceeding the global inventory of conventional fossil fuels, is locked up worldwide in hydrates. Ex-traction of this unconventional resource presents unique exploration, engineering, and economic challenges, and several countries, including the United States, Japan, Canada, India, and Korea, have initiated joint industry-academic-governmental programs to begin studying those challenges. Hydrates also constitute a potential drilling hazard. Because hydrates are only stable in a restricted range of pressure and temperature, any activity that sufficiently raises temperature or lowers pressure could destabilize them, releasing potentially large volumes of gas and decreasing the shear strength of the host sediments. Assessment of the opportunities and hazards associated with hydrates requires reliable methods of detecting hydrate and accurate maps of their distribution and concentration. Hydrate may occur only within the upper few hundred meters of deepwater sediment, at any depth between the seafloor and the base of the stability zone, which is controlled by local pressure and temperature. Hydrate is occasionally exposed at the seafloor, where it can be detected either visually or acoustically by strong seismic reflection amplitudes or high backscatter …

Description: Eight planktonic egg masses of the diamond-shaped Thysanoteuthis rhombus observed from 1995 to 2000 are described. Four were found in the western Mediterranean and the others were found off the Canary Islands. The egg masses from the Canary Islands are the first records for the eastern Atlantic. All were found near the surface at the end of summer and the beginning of autumn. The planktonic egg masses were dense, resilient oblong cylinders with rounded tips ranging from 80 to 130 cm in length and between 15 and 20 cm in diameter. Egg capsule dimensions ranged from 2.8 to 3.4 mm and total length of the newly hatched paralarvae was between 2.5 and 2.8 mm. Each egg mass contained an estimated 24 100–43 800 eggs. Some new characters that should help identification of the paralarvae, such as arm formulae, presence of an incipient keel-shaped membrane on some arms, and the type and chromatophore pattern are given. Ecological factors influencing the presence and distribution of these egg masses are discussed.

Description: Scaphitids are heteromorph ammonites exhibiting morphological trends counter to of those of the other main heteromorph ammonite groups. These trends include the shortening of the body chamber, lateral compression of the whorl, closure of the coil, and more regular, spiral coiling. Scaphitid-like morphologies may have appeared in other heteromorphs, but the Scaphitaceae are monophyletic. The most primitive scaphitids are known from the Albian, but an important radiation occurred in the Western Interior Seaway of North America from the Santonian to Maastrichtian, some of which spread to the Old World. The scaphitid morphology is consistent with improved swimming abilities, but scaphitids remained associated with the seafloor and are best considered to have been nektobenthos similar to modern nautiluses.

Description: A bioenergetic model for two narwhal (Monodon monoceros) sub-populations was developed to quantify daily gross energy requirements and estimate the biomass of Greenland halibut (Reinhardtius hippoglossoides) needed to sustain the sub-populations for their 5-month stay on wintering grounds in Baffin Bay. Whales in two separate wintering grounds were estimated to require 700 tonnes (s.e. 300) and 90 tonnes (s.e. 40) of Greenland halibut per day, assuming a diet of 50% Greenland halibut. Mean densities and length distributions of Greenland halibut inside and outside of the narwhal wintering grounds were correlated with predicted whale predation levels based on diving behavior. The difference in Greenland halibut biomass between an area with high predation and a comparable area without whales, approximately 19 000 tonnes, corresponded well with the predicted biomass removed by the narwhal sub-population on a diet of 50–75% Greenland halibut.

Description: King Penguins (Aptenodytes patagonicus) from breeding islands in the Indian Ocean (Crozet and Kerguelen Islands) and the Atlantic Ocean (South Georgia and Falkland Islands) were equipped with global location sensors to compare their foraging patterns during different times of the year. In summer, all birds investigated traveled toward the Antarctic Polar Front (APF), irrespective of whether they bred to the north (Crozet Islands, Falkland Islands), within (Kerguelen Islands) or to the south (South Georgia) of this hydrographic feature. Whereas most birds remained north of the APF and foraged in waters of the Antarctic Polar Frontal Zone, some penguins also traveled, or remained (South Georgia), south of the APF and foraged in Antarctic waters. It appeared that food resources in the vicinity of the APF were sufficiently predictable to warrant travel of several hundred km by King Penguins for foraging. Data collected on the winter distribution of King Penguins indicated at least two different foraging strategies. Birds from the oceanic Crozet Islands foraged beyond the APF in the Antarctic waters, whereas birds from the Falkland Islands relied also on the resources provided by the highly diverse and productive slope of the Patagonian Shelf. However, despite these differences, in both cases minimum distances of sometimes more than 10 000 km were covered. Further research on the foraging habitats of King Penguins over the entire breeding season and the temporal and spatial changes of oceanographic features is necessary to obtain a comprehensive picture on the variability in the foraging ranges of King Penguins.

Description: Age and growth rates of the Mediterranean short-finned squid Illex coindetii (Ommastrephidae) were studied using statoliths from 704 specimens collected during trawl surveys within the Strait of Sicily in April and October–November 1995. In both samples, almost the whole ontogenetic spectrum was present, from juveniles to spent adults. Most of the squid captured in April had hatched between October and December 1994 (autumn–winter hatched group, AW), whereas most captured in October–November had hatched between May and July 1995 with a peak in June (spring–summer hatched group, SS). Age of the AW squid did not exceed 240 days (mainly 200–210 d), while that of the SS squid did not exceed 191 days (mainly 170–180 d). Growth in length and weight was best described by the logistic growth function. In both groups, daily growth rates (DGR) of males decreased at younger ages than in females, and sexual dimorphism in sizes (females larger than males) became evident in maturing and mature adults. The AW squids grew rather slowly during their juvenile and immature phases, which occurred in cool winter and spring seasons. They were characterized by a maximum DGR in mantle length (ML) and body weight (BW) at old ages, a prolonged period of maturation and old ages of mature specimens. AW squids attained large sizes and spawned at ages of 6–7 months in spring–summer. Their progeny (SS group) grew rapidly during the warm summer and autumn seasons and achieved their maximum DGR in ML and BW at younger ages than their AW predecessors. However, their younger age at maturation (5–6 months) reduced their somatic growth during the late ontogenetic stages, resulting in rather small sizes at maturity and early spawning. It is concluded that I. coindetii in the Strait of Sicily produce at least two alternating generations each year, which are adapted to live in different seasonal environmental conditions.

Description: The food habits of the beaked skate were studied utilising 274 individuals obtained from the incidental catches of the Argentine hake (Merluccius hubbsi) fishery. The most important prey were the Argentine hake, the southern cod (Patagonotothen ramsayi), the Argentine shortfin squid (Illex argentinus), the isopod (Serolis schythei), the “raneya” (Raneya brasiliensis , Pisces: Ophidiidae), and the Argentine anchovy (Engraulis anchoita). A total of 45 prey species was identified. No differences in the diet between sexes, but significant differences among size classes and between immature and mature individuals were found. Two size-related dietary shifts previously reported in this species, at around 35 cm and 85 cm total length were confirmed and related to changes in habitat utilisation. The first shift entails a major change from benthic prey (mostly crustaceans) to demersal-benthic prey (mostly fishes) and the second change from demersal-benthic to demersal-pelagic prey (increased consumption of Argentine hake and decreased consumption of southern cod). The second shift coincides with sexual maturation and may reflect a behavioural response to maturation.

Description: Although morphology of firm-bodied shallow-water octopuses resists preservation-linked deformation, preservation and handling of deep-sea specimens of Graneledone are hypothesized to deform specimens by accelerating fluid loss from mantle and arm tissues. Principal components analysis finds that seven of 39 North Pacific specimens of the genus are exceptionally narrow; the remaining specimens show considerable morphological variation, independent of time in preservation. Five exceptionally narrow specimens, including some paratypes of G. pacifica, were collected and preserved by the same trawling study; a single unrecorded factor in their common preservation history may have caused their deformation. The high morphological variation among the remaining specimens, seemingly unique among octopodids, may reflect factors as subtle as how the specimen was stored in the jar. Two types of change with time in preservation are documented. The mantle wall of formalin-fixed specimens thins unpredictably after storage for 30 months in 70% ethanol, consistent with deformation in preservation. Skin tubercles on the dorsal mantle, important taxonomic characters, become more prominent during the first decade in preservation. To maximize the information specimens with fluid-rich tissues convey and to identify the sources of deformation, the full preservation history and measurements made prior to dissection should be permanently recorded.

Description: Fishing can change the biological diversity of an ecosystem substantially, and determining the effects of fishing on marine biodiversity requires a variety of data, chief among them the proper identification of organisms. Because identification of all organisms in an ecosystem is not currently possible, target taxonomic groups (taxa) must be selected. The current status of taxonomic information varies greatly among taxa and among geographic areas within taxa. Problems include nomenclature, diagnoses, and determination of taxonomic relationships. We provide examples of a variety of these problems. We then propose a series of criteria for evaluating available taxonomic information in determining the potential reliability of species identification, including recency and comprehensiveness of revisionary studies, methods used for systematic and phylogenetic studies, adequacy of documentation, and evidence of peer review. When the goal is to explore biodiversity, these criteria must be used differently from when measuring and monitoring biodiversity.

Description: The systematics and distribution of the cirrate octopod genus Grimpoteuthis in the north-east Atlantic are reviewed. Three new species are described and Grimpoteuthis wuelkeri (Grimpe, 1920) is redescribed. A new generic diagnosis is proposed. Five species of Grimpoteuthis are recognized in the north-east Atlantic. The type species, G. umbellata (Fisher, 1883) is known only from the type specimen, which is in such poor condition that comparison with recently captured material was not possible. G. wuelkeri is a large, slope species, caught between 1600 m and 2200 m in the north-east and north-west Atlantic. Of the three new species, both G. boylei and G. challengeri are large abyssal species. G. boylei is found in the north-east Atlantic at the Porcupine Abyssal Plain (PAP) and the Madeira Abyssal Plain and may be found at abyssal depths throughout the north-east Atlantic. G. challengeri is known from the PAP, with a single specimen from the north-west Atlantic. G. discoveryi is a small, lower slope and abyssal species found in the north-east Atlantic. The Grimpoteuthis species can be separated based on shell form, presence of a radula and posterior salivary glands, arrangement of suckers and cirri and gill morphology. Two species, G. megaptera Verrill and G. plena Verrill, have been described from the north-west Atlantic, but the types are either lost (G. megaptera) or in poor condition (G. plena), hindering comparisons. Material examined from the north-west Atlantic included G. wuelkeri, G. challengeri and at least two other species.

Description: The curves of optimum frequencies versus maximum range for active sonar detection under specific sets of assumptions are presented for the more recent expressions for attenuation given by Lovett [J. Acoust. Soc. Am. 58, 620–625 (1975)] for the eastern North Pacific and Thorp [J. Acoust. Soc. Am. 42, 270 (1967)] for the western North Atlantic as corrected at low frequencies by Kibblewhite et al. [J. Acoust. Soc. Am. 60, 1040–1047 (1976)].

Description: in a recent publication von Brandt (1) gives a survey of all determinations of the calcium content of Baltic water hitherto published. He records in all 39 analyses made during the last century, which give us an idea of the order of magnitude of the calcium concentration; they cannot, however, serve for comparative purposes as in many cases chlorine determinations on the same water samples are lacking. Neither have we any clue for judging the accuracy of these analyses, the latest of which date from 1884. Fifty years later, in 1935, Za rin s and O z o 1 ins (8) published an extensive investi­gation of the water in the Bay of Riga and in the Baltic off the Latvian coast, their most westerly station nearly coinciding with the Finnish station F81 (Lat. 57° 22'N., Long. 19°57'E.) above the central depression of the Baltic. Their material comprised about 70 calcium analyses on water from all depths. Finally v o n B r a n d t in the above-mentioned paper publishes nearly 300 analyses of surface water collected in 1935 and 1936 during several voyages from Pillau to Helsingfors and back, and along the German coast as far as Kiel and back. The present material comprises analyses of only 48 samples of surface and bottom water collected during the summer cruise, in July 1935, of the s.s. "Nautilus" from the Gulf of Finland, the Gulf of Bothnia, and the northern half of the Baltic proper. In spite of the smaller number of samples this material is more comprehensive than the two preceding investigations in so far as it covers a greater area of the sea. I t was originally meant as a survey of the calcium content in these parts of the Baltic, but the surprisingly simple relationships between calcium content and chlorinity which it revealed, give the results far more scope than was expected.