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  • Articles  (85)
  • QnAs  (63)
  • Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature  (22)
  • National Academy of Sciences  (85)
  • Blackwell Publishing Ltd
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  • 1980-1984
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  • Articles  (85)
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  • National Academy of Sciences  (85)
  • Blackwell Publishing Ltd
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  • 2010-2014  (85)
  • 1980-1984
  • 1925-1929
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  • 1
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    National Academy of Sciences
    Publication Date: 2013-09-11
    Description: In a classic psychological experiment performed in the late 1960s, animals in one group could stop administered shocks by pressing a lever, whereas those in another group could not stop the shocks despite pressing the lever. Later, when the powerless animals were eventually presented with a working lever, they didn’t...
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  • 2
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    National Academy of Sciences
    Publication Date: 2013-06-12
    Description: The factors underlying obesity are multifaceted, but recent research suggests that the brain’s melanocortin circuits, which play a key role in controlling the balance between energy consumption and use, lie at the heart of obesity. According to Roger D. Cone, elected to the National Academy of Sciences in 2010 and...
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  • 3
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    National Academy of Sciences
    Publication Date: 2011-06-08
    Description: Molecular biologist Leroy Hood says a transformation in medicine is gingerly afoot. The change, which he calls P4 medicine (predictive, preventive, personalized, and participatory), could turn today’s reactive approach to medicine into a proactive one in the future. Hood, president of the Institute for Systems Biology in Seattle, Washington, is no stranger to scientific revolutions. In the 1980s Hood helped invent automated DNA and protein synthesizers and sequencers, which made the Human Genome Project possible. Those technological feats snagged Hood many laurels, including the Kyoto Prize and the Lemelson-MIT Prize for Invention and Innovation. Hood tells PNAS how systems biology—the...
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  • 4
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    National Academy of Sciences
    Publication Date: 2011-08-03
    Description: Insects and plants often share a complicated relationship, and University of Illinois, Urbana–Champaign entomologist May Berenbaum has a fine understanding of its chemistry. Berenbaum, a member of the National Academy of Sciences, has long studied how insects and plants evolve chemical arsenals to survive together, pitting cunning defense against toxic offense. Author of a number of popular science books on coevolution, Berenbaum won the 2011 Tyler Prize for Environmental Achievement for her contributions to entomology. Among her many pursuits is an exploration of the likely cause of honey bee die-offs across the United States, an affliction called colony collapse disorder....
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  • 5
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    National Academy of Sciences
    Publication Date: 2013-01-16
    Description: The moment a bacterium invades a human cell, the immune system triggers a series of events meant to destroy the pathogen and display the remnants like victory flags on the cell’s surface. National Academy of Sciences member Ralph R. Isberg, a professor of molecular biology and microbiology at Tufts University...
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  • 6
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    National Academy of Sciences
    Publication Date: 2012-10-03
    Description: Expertise, transparency, impartiality, appropriateness, confidentiality, and integrity: Those are the guiding principles of scientific merit review espoused by a recent global summit hosted by the National Science Foundation (NSF). Led by the federal agency’s director Subra Suresh, former dean of engineering at Massachusetts Institute of Technology and a newly elected...
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  • 7
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    National Academy of Sciences
    Publication Date: 2012-08-22
    Description: As an aspiring young biologist in the 1960s, Baldomero Olivera left Stanford University to return to his native Philippines, finding a laboratory devoid of equipment. While applying for research funding, Olivera decided to study something local and inexpensive, recalling from his childhood that certain cone snails use a harpoon-like tooth to inject prey with a deadly paralyzing venom. On a whim, Olivera decided to purify cone snail venom to see how it works. That off-the-cuff decision spawned a surprisingly successful career. Olivera, now a distinguished professor of biology at the University of Utah (Salt Lake City, UT) and recently elected...
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  • 8
    Publication Date: 2012-09-12
    Description: Charles F. Stevens applies the methods of theoretical physics, molecular biology, and anatomy to answer fundamental questions about the brain. A professor of neurobiology at the Salk Institute for Biological Studies and a member of the National Academy of Sciences since 1982, Stevens has helped unravel the molecular details of...
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  • 9
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    National Academy of Sciences
    Publication Date: 2012-06-20
    Description: Shu Chien is one of only 13 scholars to belong jointly to the National Academy of Sciences, the National Academy of Engineering, and the Institute of Medicine—a testament to his expertise in biology, medicine, and engineering and his ability to fuse the three fields in his research. A professor of bioengineering and medicine at the University of California, San Diego (UCSD) and Director of the UCSD Institute of Engineering in Medicine, Chien received the 2011 National Medal of Science, the highest honor bestowed to scientists and engineers by the United States government. His research has contributed greatly to our understanding...
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  • 10
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    National Academy of Sciences
    Publication Date: 2012-06-27
    Description: For his strident advocacy of people-centered conservation, aimed at striking a balance between economic and ecological interests, Peter Kareiva has been often cast as a maverick among environmentalists. Thanks to a growing infusion of science into conservation efforts in the 21st century, Kareiva, elected in 2011 to the National Academy of Sciences, says the environmental movement has come a long way since its birth two centuries ago. As chief scientist at The Nature Conservancy, a bastion for environmental interests, Kareiva helped launch a collaborative endeavor called the Natural Capital Project in 2006 to develop scientific tools to evaluate the costs...
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  • 11
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    National Academy of Sciences
    Publication Date: 2012-05-30
    Description: Nearly half of the world’s population relies on fuels such as wood or dung for cooking and heating. In the 1980s, Kirk R. Smith, a member of the National Academy of Sciences and a professor of global health at the University of California at Berkeley, sounded the alarm that these fuels, when burned in open fires or traditional cook stoves, produce high levels of indoor air pollution that prematurely kill about 2 million people each year—more than either malaria or tuberculosis, according to Smith. Cleaner alternatives to traditional cook stoves exist, but convincing funding agencies and decision makers to invest...
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  • 12
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    National Academy of Sciences
    Publication Date: 2012-06-06
    Description: Rising global demand for food, biofuels, and agricultural commodities such as soybeans and oil palm has driven the clearing of vast swaths of tropical forests to make way for cattle ranches and cropland. According to Columbia University geographer and National Academy of Sciences member Ruth DeFries, intensive high-yield farming is an often-proposed solution to simultaneously conserve tropical forests, increase food production, and reduce greenhouse gas emissions from forest clearing. But whether this strategy works remains unclear. DeFries has long used satellite imagery to examine human transformation of the planet’s landscape. Here, DeFries shares her recent counterintuitive findings from a study...
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  • 13
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    National Academy of Sciences
    Publication Date: 2012-04-25
    Description: The interplay of light and matter has long preoccupied Stanford University physical chemist W. E. Moerner. As a scientist at IBM Research during the late 1980s, Moerner developed then-novel techniques to configure holograms by altering the light-refracting properties of a polymer. Today, Moerner uses the power of light to probe how individual biological molecules behave within and without the seeming clutter of living cells. Moerner was elected to the National Academy of Sciences in recognition of his work, in particular the optical detection and spectroscopy of single molecules. Those studies opened a window into the nanoscale world of cells, offering...
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  • 14
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    National Academy of Sciences
    Publication Date: 2011-11-30
    Description: Like good and bad cholesterol, human body fat comes in two varieties: white fat cells, which store excess calories, and brown fat cells, which burn energy to generate body heat. Less well known outside the scientific community, brown fat cells have long been a fascination for National Academy of Sciences member Bruce Spiegelman, a professor of cell biology at Dana–Farber Cancer Institute and Harvard Medical School. Spiegelman’s work on fat metabolism is far-reaching: From finding ways to stimulate brown fat development in the body to unraveling the activity of drugs against diabetes, he has shown how understanding the genetics of...
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  • 15
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    National Academy of Sciences
    Publication Date: 2012-02-29
    Description: In the late 1950s, biochemist Christian Anfinsen demonstrated that the sequence of amino acids in a protein contains all of the information required for the protein to acquire its functional shape. In recent years, researchers have found that many newly minted proteins make an important stop on their journey to the native shape: they bind to one or more helper proteins called molecular chaperones, which prevent the proteins’ exposed surfaces from sticking to one another. Such undesirable molecular association can lead to protein aggregation, a hallmark of many human diseases. Together, German biochemist F. Ulrich Hartl and Yale University geneticist...
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  • 16
    Publication Date: 2012-03-07
    Description: The work of National Academy of Sciences (NAS) member Porter W. Anderson, Jr. has benefitted millions of people around the globe: Anderson has spent his career developing vaccines against some of the leading causes of infection in children. For his contributions to the development and commercialization of the Haemophilus influenzae type b (Hib) vaccine—which has virtually eradicated one of the leading causes of meningitis in preschool-aged children—Anderson shared the 1996 Albert Lasker Clinical Medical Research Award with the late David Smith, Rachel Schneerson, and NAS member John Robbins. Since retiring from the University of Rochester in the late 1990s, Anderson...
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  • 17
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    National Academy of Sciences
    Publication Date: 2011-09-21
    Description: In late November 2011, the National Aeronautics and Space Administration (NASA) plans to launch its robotic explorer to scour Mars for signs of the planet’s ability to support life. The Mars Science Laboratory (MSL) spacecraft is scheduled to lift off from Cape Canaveral Air Force Station in Florida, shuttling Curiosity, an SUV-sized rover with a hefty scientific payload, to the red planet’s surface. John Grotzinger, a member of the National Academy of Sciences and professor of geology at the California Institute of Technology, helps oversee the mission. He became involved in the quest after studying how changes in the Earth’s...
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  • 18
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    National Academy of Sciences
    Publication Date: 2011-03-09
    Description: At Albert Einstein College of Medicine of Yeshiva University in New York City, Vern Schramm, a professor of biochemistry, devises ways to block cellular enzymes. Those enzymes, which catalyze a range of reactions at the heart of normal physiology, might hold keys to treating psoriasis, autoimmune disease, and some forms of cancer. Schramm’s studies on the mechanism of enzyme-catalyzed reactions have led to a handful of drugs now being tested in clinical trials. In 2009, he developed a test for ricin, a deadly toxin found in castor beans, which has the potential to be used by bioterrorists. Schramm tells PNAS...
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  • 19
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    National Academy of Sciences
    Publication Date: 2011-03-30
    Description: Gary King, a professor of social science at Harvard University and a member of the National Academy of Sciences, fashions tools that harness the power of statistics, machine learning, and informatics to make sense of the numbers that matter to society. From evaluating the efficacy of a Mexican health policy reform to predicting the fate of the US Social Security trust fund, King’s sophisticated number crunching has important practical implications for disciplines as diverse as social, political, and health sciences. King tells PNAS how quantitative social science research can extend from academic journals into real-world scenarios.PNAS:You designed a health policy...
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  • 20
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    National Academy of Sciences
    Publication Date: 2011-03-16
    Description: Of the world’s mathematicians, Gilbert Strang is possibly the most visible—or at least among the most frequently viewed. Millions of students from the Americas, Africa, China, Europe, India, and Singapore have watched Strang’s lectures on linear algebra courtesy of Massachusetts Institute of Technology (MIT)’s OpenCourseWare Web site (1), and many have e-mailed him to ask for one-on-one help. A former president of the Society for Industrial and Applied Mathematics (SIAM), author of several textbooks (2–9), and 2009 electee to the National Academy of Sciences, Strang wrote the book on linear algebra—and his text has changed how the material is taught....
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  • 21
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    National Academy of Sciences
    Publication Date: 2011-04-06
    Description: As the director of the Rosenstiel Basic Medical Sciences Research Center at Brandeis University in Waltham, MA, James Haber seeks to understand how cells repair damaged DNA—and what happens when the process goes awry, triggering the onset of cancer and other devastating diseases. Haber’s work on yeast genetics has earned him some of the highest honors in science, including the Thomas Hunt Morgan Medal for lifetime contributions in genetics and election to the National Academy of Sciences in 2010. Haber recently spoke with PNAS about the technologies his laboratory has used to explore a form of DNA damage known as...
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  • 22
    Publication Date: 2011-04-27
    Description: “Organic synthesis” is a compound-creating activity often focused on biologically active small molecules. This special issue of PNAS explores innovations and trends in the field that are enabling the synthesis of new types of small-molecule probes and drugs. This perspective article frames the research described in the special issue but also explores how these modern capabilities can both foster a new and more extensive view of basic research in the academy and promote the linkage of life-science research to the discovery of novel types of small-molecule therapeutics [Schreiber SL (2009) Chem Bio Chem 10:26–29]. This new view of basic research aims to bridge the chasm between basic scientific discoveries in life sciences and new drugs that treat the root cause of human disease—recently referred to as the “valley of death” for drug discovery. This perspective article describes new roles that modern organic chemistry will need to play in overcoming this challenge.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 23
    Publication Date: 2011-04-27
    Description: In Biology Oriented Synthesis the scaffolds of biologically relevant compound classes inspire the synthesis of focused compound collections enriched in bioactivity. This criterion is met by the structurally complex scaffolds of natural products (NPs) selected in evolution. The synthesis of NP-inspired compound collections approaching the complexity of NPs calls for the development of efficient synthetic methods. We have developed a one pot 4–7 step synthesis of mono-, bi-, and tricyclic oxepanes that resemble the core scaffolds of numerous NPs with diverse bioactivities. This sequence entails a ring-closing ene-yne metathesis reaction as key step and makes productive use of polymer-immobilized scavenger reagents. Biological profiling of a corresponding focused compound collection in a reporter gene assay monitoring for Wnt-signaling modulation revealed active Wntepanes. This unique class of small-molecule activators of the Wnt pathway modulates the van-Gogh-like receptor proteins (Vangl), which were previously identified in noncanonical Wnt signaling, and acts in synergy with the canonical activator protein (Wnt-3a).
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 24
    Publication Date: 2011-04-27
    Description: Amphotericin B is the archetype for small molecules that form transmembrane ion channels. However, despite extensive study for more than five decades, even the most basic features of this channel structure and its contributions to the antifungal activities of this natural product have remained unclear. We herein report that a powerful series of functional group-deficient probes have revealed many key underpinnings of the ion channel and antifungal activities of amphotericin B. Specifically, in stark contrast to two leading models, polar interactions between mycosamine and carboxylic acid appendages on neighboring amphotericin B molecules are not required for ion channel formation, nor are these functional groups required for binding to phospholipid bilayers. Alternatively, consistent with a previously unconfirmed third hypothesis, the mycosamine sugar is strictly required for promoting a direct binding interaction between amphotericin B and ergosterol. The same is true for cholesterol. Synthetically deleting this appendage also completely abolishes ion channel and antifungal activities. All of these results are consistent with the conclusion that a mycosamine-mediated direct binding interaction between amphotericin B and ergosterol is required for both forming ion channels and killing yeast cells. The enhanced understanding of amphotericin B function derived from these synthesis-enabled studies has helped set the stage for the more effective harnessing of the remarkable ion channel-forming capacity of this prototypical small molecule natural product.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 25
    Publication Date: 2011-04-27
    Description: The search for novel therapeutic interventions for viral disease is a challenging pursuit, hallmarked by the paucity of antiviral agents currently prescribed. Targeting of viral proteins has the inextricable challenge of rise of resistance. Safe and effective vaccines are not possible for many viral pathogens. New approaches are required to address the unmet medical need in this area. We undertook a cell-based high-throughput screen to identify leads for development of drugs to treat respiratory syncytial virus (RSV), a serious pediatric pathogen. We identified compounds that are potent (nanomolar) inhibitors of RSV in vitro in HEp-2 cells and in primary human bronchial epithelial cells and were shown to act postentry. Interestingly, two scaffolds exhibited broad-spectrum activity among multiple RNA viruses. Using the chemical matter as a probe, we identified the targets and identified a common cellular pathway: the de novo pyrimidine biosynthesis pathway. Both targets were validated in vitro and showed no significant cell cytotoxicity except for activity against proliferative B- and T-type lymphoid cells. Corollary to this finding was to understand the consequences of inhibition of the target to the host. An in vivo assessment for antiviral efficacy failed to demonstrate reduced viral load, but revealed microscopic changes and a trend toward reduced pyrimidine pools and findings in histopathology. We present here a discovery program that includes screen, target identification, validation, and druggability that can be broadly applied to identify and interrogate other host factors for antiviral effect starting from chemical matter of unknown target/mechanism of action.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 26
    Publication Date: 2011-04-27
    Description: Structurally diverse libraries of novel small molecules represent important sources of biologically active agents. In this paper we report the development of a diversity-oriented synthesis strategy for the generation of diverse small molecules based around a common macrocyclic peptidomimetic framework, containing structural motifs present in many naturally occurring bioactive compounds. Macrocyclic peptidomimetics are largely underrepresented in current small-molecule screening collections owing primarily to synthetic intractability; thus novel molecules based around these structures represent targets of significant interest, both from a biological and a synthetic perspective. In a proof-of-concept study, the synthesis of a library of 14 such compounds was achieved. Analysis of chemical space coverage confirmed that the compound structures indeed occupy underrepresented areas of chemistry in screening collections. Crucial to the success of this approach was the development of novel methodologies for the macrocyclic ring closure of chiral α-azido acids and for the synthesis of diketopiperazines using solid-supported N methylmorpholine. Owing to their robust and flexible natures, it is envisaged that both new methodologies will prove to be valuable in a wider synthetic context.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 27
    Publication Date: 2011-04-27
    Description: Fragment-based drug discovery (FBDD) has proven to be an effective means of producing high-quality chemical ligands as starting points for drug-discovery pursuits. The increasing number of clinical candidate drugs developed using FBDD approaches is a testament of the efficacy of this approach. The success of fragment-based methods is highly dependent on the identity of the fragment library used for screening. The vast majority of FBDD has centered on the use of sp2-rich aromatic compounds. An expanded set of fragments that possess more 3D character would provide access to a larger chemical space of fragments than those currently used. Diversity-oriented synthesis (DOS) aims to efficiently generate a set of molecules diverse in skeletal and stereochemical properties. Molecules derived from DOS have also displayed significant success in the modulation of function of various “difficult” targets. Herein, we describe the application of DOS toward the construction of a unique set of fragments containing highly sp3-rich skeletons for fragment-based screening. Using cheminformatic analysis, we quantified the shapes and physical properties of the new 3D fragments and compared them with a database containing known fragment-like molecules.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 28
    Publication Date: 2011-04-27
    Description: The synthesis of γ-lactams that are unsubstituted at the 1-position (nitrogen) as well as their subsequent N-functionalization is reported. A recently discovered four-component reaction (4CR) is employed with either an ammonia precursor or a protected form of ammonia that can be deprotected in a subsequent synthetic step. These methods represent the first multicomponent assembly of complex lactam structures that are unsubstituted at nitrogen. In addition, two methods for the introduction of nitrogen substituents that are not possible through the original 4CR are reported. X-ray crystallographic analysis of representative structures reveals conformational changes in the core structure that will enable future deployment of this chemistry in the design and synthesis of diverse collections of lactams suitable for the discovery of new biological probes.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 29
    Publication Date: 2011-04-27
    Description: Using a diverse collection of small molecules we recently found that compound sets from different sources (commercial; academic; natural) have different protein-binding behaviors, and these behaviors correlate with trends in stereochemical complexity for these compound sets. These results lend insight into structural features that synthetic chemists might target when synthesizing screening collections for biological discovery. We report extensive characterization of structural properties and diversity of biological performance for these compounds and expand comparative analyses to include physicochemical properties and three-dimensional shapes of predicted conformers. The results highlight additional similarities and differences between the sets, but also the dependence of such comparisons on the choice of molecular descriptors. Using a protein-binding dataset, we introduce an information-theoretic measure to assess diversity of performance with a constraint on specificity. Rather than relying on finding individual active compounds, this measure allows rational judgment of compound subsets as groups. We also apply this measure to publicly available data from ChemBank for the same compound sets across a diverse group of functional assays. We find that performance diversity of compound sets is relatively stable across a range of property values as judged by this measure, both in protein-binding studies and functional assays. Because building screening collections with improved performance depends on efficient use of synthetic organic chemistry resources, these studies illustrate an important quantitative framework to help prioritize choices made in building such collections.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 30
    Publication Date: 2011-04-27
    Description: Reported biological activities of Stemona natural products, such as antitussive activity, inspired the development of synthetic methods to access several alkaloids within this family and in so doing develop a general route to the core skeleta shared by the class of natural products. The chemistry was subsequently adapted to afford a series of analogue sets bearing simplified, diverse Stemona-inspired skeleta. Over 100 of these analogues were subjected to general G protein-coupled receptor profiling along with the known antitussive compound, neostenine; this led to the identification of hit compounds targeting several receptor types. The particularly rich hit subset for sigma receptors was expanded with two focused library sets, which resulted in the discovery of a fully synthetic, potent chemotype of sigma ligands. This collaborative effort combined the development of synthetic methods with extensive, flexible screening resources and exemplifies the role of natural products in bioactivity mining.
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  • 31
    Publication Date: 2011-04-27
    Description: Buruli ulcer is a severe and devastating skin disease caused by Mycobacterium ulcerans infection, yet it is one of the most neglected diseases. The causative toxin, referred to as mycolactone A/B, was isolated and characterized as a polyketide-derived macrolide in 1999. The current status of the mycolactone chemistry is described, highlighting the stereochemistry assignment of mycolactone A/B; total synthesis; the structure determination of mycolactone congeners from the human pathogen M. ulcerans, the frog pathogen Mycobacterium liflandii, and the fish pathogen Mycobacterium marinum; the structural diversity in the mycolactone class of natural products; the highly sensitive detection/structure-analysis of mycolactones; and some biological activity.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 32
    Publication Date: 2011-04-27
    Description: In an effort to expand the stereochemical and structural complexity of chemical libraries used in drug discovery, the Center for Chemical Methodology and Library Development at Boston University has established an infrastructure to translate methodologies accessing diverse chemotypes into arrayed libraries for biological evaluation. In a collaborative effort, the NIH Chemical Genomics Center determined IC50’s for Plasmodium falciparum viability for each of 2,070 members of the CMLD-BU compound collection using quantitative high-throughput screening across five parasite lines of distinct geographic origin. Three compound classes displaying either differential or comprehensive antimalarial activity across the lines were identified, and the nascent structure activity relationships (SAR) from this experiment used to initiate optimization of these chemotypes for further development.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 33
    Publication Date: 2011-04-27
    Description: Modern drug discovery efforts rely, to a large extent, on lead compounds from two classes of small organic molecules; namely, natural products (i.e., secondary metabolites) and designed compounds (i.e., synthetic molecules). In this article, we demonstrate how these two domains of lead compounds can be merged through total synthesis and molecular design of analogs patterned after the targeted natural products, whose promising biological properties provide the motivation. Specifically, the present study targeted the naturally occurring biyouyanagins A and B and their analogs through modular chemical synthesis and led to the discovery of small organic molecules possessing anti-HIV and anti-arenavirus properties.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 34
    Publication Date: 2011-04-27
    Description: The endothelium plays a critical role in promoting inflammation in cardiovascular disease and other chronic inflammatory conditions, and many small-molecule screens have sought to identify agents that prevent endothelial cell activation. Conversely, an augmented immune response can be protective against microbial pathogens and in cancer immunotherapy. Yet, small-molecule screens to identify agents that induce endothelial cell activation have not been reported. In this regard, a bioassay was developed that identifies activated endothelium by its capacity to trigger macrophage inflammatory protein 1 beta from primary monocytes. Subsequently, a 642-compound library of 39 distinctive scaffolds generated by a diversity-oriented synthesis based on the nucleophilic phosphine catalysis was screened for small molecules that activated the endothelium. Among the active compounds identified, the major classes were synthesized through the sequence of phosphine-catalyzed annulation, Tebbe reaction, Diels–Alder reaction, and in some cases, hydrolysis. Ninety-six analogs of one particular class of compounds, octahydro-1,6-naphthyridin-4-ones, were efficiently prepared by a solid-phase split-and-pool technique and by solution phase analog synthesis. Structure-function analysis combined with transcriptional profiling of active and inactive octahydro-1,6-naphthyridin-4-one analogs identified inflammatory gene networks induced exclusively by the active compound. The identification of a family of chemical probes that augment innate immunity through endothelial cell activation provides a framework for understanding gene networks involved in endothelial inflammation as well as the development of novel endothelium-driven immunotherapeutic agents.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 35
    Publication Date: 2011-04-27
    Description: In conjunction with the construction of a diversity-oriented synthesis library of 10-membered ring “natural product-like” macrolides, the design, synthesis, and validation of a unique class of bifunctional linchpins, uniting benzyne reactivity initiated by type II anion relay chemistry (ARC) has been achieved, permitting access to diverse [2+2], [3+2], and [4+2] cycloadducts.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 36
    Publication Date: 2011-04-27
    Description: Unique chemical methodology enables the synthesis of innovative and diverse scaffolds and chemotypes and allows access to previously unexplored “chemical space.” Compound collections based on such new synthetic methods can provide small-molecule probes of proteins and/or pathways whose functions are not fully understood. We describe the identification, characterization, and evolution of two such probes. In one example, a pathway-based screen for DNA damage checkpoint inhibitors identified a compound, MARPIN (ATM and ATR pathway inhibitor) that sensitizes p53-deficient cells to DNA-damaging agents. Modification of the small molecule and generation of an immobilized probe were used to selectively bind putative protein target(s) responsible for the observed activity. The second example describes a focused library approach that relied on tandem multicomponent reaction methodologies to afford a series of modulators of the heat shock protein 70 (Hsp70) molecular chaperone. The synthesis of libraries based on the structure of MAL3-101 generated a collection of chemotypes, each modulating Hsp70 function, but exhibiting divergent pharmacological activities. For example, probes that compromise the replication of a disease-associated polyomavirus were identified. These projects highlight the importance of chemical methodology development as a source of small-molecule probes and as a drug discovery starting point.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 37
    Publication Date: 2011-04-27
    Description: Modern methods for the identification of therapeutic leads include chemical or virtual screening of compound libraries. Nature’s library represents a vast and diverse source of leads, often exhibiting exquisite biological activities. However, the advancement of natural product leads into the clinic is often impeded by their scarcity, complexity, and nonoptimal properties or efficacy as well as the challenges associated with their synthesis or modification. Function-oriented synthesis represents a strategy to address these issues through the design of simpler and therefore synthetically more accessible analogs that incorporate the activity-determining features of the natural product leads. This study illustrates the application of this strategy to the design and synthesis of functional analogs of the bryostatin marine natural products. It is specifically directed at exploring the activity-determining role of bryostatin A-ring functionality on PKC affinity and selectivity. The resultant functional analogs, which were prepared by a flexible, modular synthetic strategy, exhibit excellent affinity to PKC and differential isoform selectivity. These and related studies provide the basic information needed for the design of simplified and thus synthetically more accessible functional analogs that target PKC isoforms, major targets of therapeutic interest.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 38
    Publication Date: 2011-04-27
    Description: Many first-line cancer drugs are natural products or are derived from them by chemical modification. The trioxacarcins are an emerging class of molecules of microbial origin with potent antiproliferative effects, which may derive from their ability to covalently modify duplex DNA. All trioxacarcins appear to be derivatives of a nonglycosylated natural product known as DC-45-A2. To explore the potential of the trioxacarcins for the development of small-molecule drugs and probes, we have designed a synthetic strategy toward the trioxacarcin scaffold that enables access to both the natural trioxacarcins and nonnatural structural variants. Here, we report a synthetic route to DC-45-A2 from a differentially protected precursor, which in turn is assembled in just six steps from three components of similar structural complexity. The brevity of the sequence arises from strict adherence to a plan in which strategic bond-pair constructions are staged at or near the end of the synthetic route.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 39
    Publication Date: 2011-04-27
    Description: Complexity and the presence of stereogenic centers have been correlated with success as compounds transition from discovery through the clinic. Here we describe the synthesis of a library of pyran-containing macrocycles with a high degree of structural complexity and up to five stereogenic centers. A key feature of the design strategy was to use a modular synthetic route with three fragments that can be readily interchanged or “shuffled” to produce subtly different variants with distinct molecular shapes. A total of 352 macrocycles were synthesized ranging in size from 14- to 16-membered rings. In order to facilitate the generation of stereostructure-activity relationships, the complete matrix of stereoisomers was prepared for each macrocycle. Solid-phase assisted parallel solution-phase techniques were employed to allow for rapid analogue generation. An intramolecular nitrile-activated nucleophilic aromatic substitution reaction was used for the key macrocyclization step.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 40
    Publication Date: 2011-04-27
    Description: Alkaloid and terpenoid natural products display an extensive array of chemical frameworks and biological activities. However such scaffolds remain underrepresented in current screening collections and are, thus, attractive targets for the synthesis of natural product-based libraries that access underexploited regions of chemical space. Recently, we reported a systematic approach to the stereoselective synthesis of multiple alkaloid/terpenoid-like scaffolds using transition metal-mediated cycloaddition and cyclization reactions of enyne and diyne substrates assembled on a tert-butylsulfinamide lynchpin. We report herein the synthesis of a 190-membered library of alkaloid/terpenoid-like molecules using this synthetic approach. Translation to solid-phase synthesis was facilitated by the use of a tert-butyldiarylsilyl (TBDAS) linker that closely mimics the tert-butyldiphenysilyl protecting group used in the original solution-phase route development work. Unexpected differences in stereoselectivity and regioselectivity were observed in some reactions when carried out on solid support. Further, the sulfinamide moiety could be hydrolyzed or oxidized efficiently without compromising the TBDAS linker to provide additional amine and sulfonamide functionalities. Principal component analysis of the structural and physicochemical properties of these molecules confirmed that they access regions of chemical space that overlap with bona fide natural products and are distinct from areas addressed by conventional synthetic drugs and drug-like molecules. The influences of scaffolds and substituents were also evaluated, with both found to have significant impacts on location in chemical space and three-dimensional shape. Broad biological evaluation of this library will provide valuable insights into the abilities of natural product-based libraries to access similarly underexploited regions of biological space.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 41
    Publication Date: 2011-04-27
    Description: We have developed an efficient strategy to a skeletally diverse chemical library, which entailed a sequence of enyne cycloisomerization, [4 + 2] cycloaddition, alkene dihydroxylation, and diol carbamylation. Using this approach, only 16 readily available building blocks were needed to produce a representative 191-member library, which displayed broad distribution of molecular shapes and excellent physicochemical properties. This library further enabled identification of a small molecule, which effectively suppressed glycolytic production of ATP and lactate in CHO-K1 cell line, representing a potential lead for the development of a new class of glycolytic inhibitors.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 42
    Publication Date: 2011-04-27
    Description: National Institutes of Health (NIH)-sponsored screening centers provide academic researchers with a special opportunity to pursue small-molecule probes for protein targets that are outside the current interest of, or beyond the standard technologies employed by, the pharmaceutical industry. Here, we describe the outcome of an inhibitor screen for one such target, the enzyme protein phosphatase methylesterase-1 (PME-1), which regulates the methylesterification state of protein phosphatase 2A (PP2A) and is implicated in cancer and neurodegeneration. Inhibitors of PME-1 have not yet been described, which we attribute, at least in part, to a dearth of substrate assays compatible with high-throughput screening. We show that PME-1 is assayable by fluorescence polarization-activity-based protein profiling (fluopol-ABPP) and use this platform to screen the 300,000+ member NIH small-molecule library. This screen identified an unusual class of compounds, the aza-β-lactams (ABLs), as potent (IC50 values of approximately 10 nM), covalent PME-1 inhibitors. Interestingly, ABLs did not derive from a commercial vendor but rather an academic contribution to the public library. We show using competitive-ABPP that ABLs are exquisitely selective for PME-1 in living cells and mice, where enzyme inactivation leads to substantial reductions in demethylated PP2A. In summary, we have combined advanced synthetic and chemoproteomic methods to discover a class of ABL inhibitors that can be used to selectively perturb PME-1 activity in diverse biological systems. More generally, these results illustrate how public screening centers can serve as hubs to create spontaneous collaborative opportunities between synthetic chemistry and chemical biology labs interested in creating first-in-class pharmacological probes for challenging protein targets.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 43
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    National Academy of Sciences
    Publication Date: 2014-01-22
    Description: From the rust-brown sediments of long-dried streams that once rumbled through the rugged terrain of Canada’s Ellesmere Island, a team of paleontologists unearthed in 2004 fossils of a 375 million-year-old species of fish that may have nearly crossed an evolutionary Rubicon. Named Tiktaalik roseae, the now-extinct animal has come to...
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  • 44
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    National Academy of Sciences
    Publication Date: 2013-12-11
    Description: As electrical signals course through brain cells, a stepwise process of information transfer ensures that the signals are relayed across junctions called synapses. Orchestrating the process on either side of the synaptic gulf is a suite of proteins found on neuronal membranes and on tiny vesicles that ferry signaling molecules,...
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  • 45
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    National Academy of Sciences
    Publication Date: 2013-10-09
    Description: William Bialek works at the interface of physics and biology, searching for predictive mathematical theories that can quantify and explain diverse biological phenomena. A member of the National Academy of Sciences, Bialek is the John Archibald Wheeler/Battelle Professor in Physics at Princeton University, a member of Princeton’s multidisciplinary Lewis-Sigler Institute...
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  • 46
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    National Academy of Sciences
    Publication Date: 2013-10-23
    Description: Much of our everyday behavior is guided by habits. By studying the electrical activity in the brains of animals as they acquire a habit, Ann M. Graybiel, a neuroscientist at the Massachusetts Institute of Technology and a National Academy of Sciences member, uncovers the neurobiological basis of how habits form...
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  • 47
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    National Academy of Sciences
    Publication Date: 2014-02-26
    Description: In his 1933 inaugural address to the American people, President Franklin Roosevelt attempted to rouse the nation out of the stultifying Depression with his famous aphorism on fear as a self-fulfilling end. Decades later, a scientific understanding of fear continues to remain elusive, despite the unraveling of brain circuits triggered...
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  • 48
    Publication Date: 2012-02-22
    Description: Richard Durrett’s work lies at the interface of mathematics and biology, where the tools of probability theory are used to study problems in ecology, genetics, and cancer biology. Durrett, a professor of mathematics at Duke University and a recently elected member of the National Academy of Sciences, has devoted his career to developing models for biological questions ranging from the behavior of populations in ecological systems to the effects of mutations and natural selection on genomes. Durrett talks to PNAS about his recent work on the development and spread of cancer and how mathematical approaches can be applied to biological...
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  • 49
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    National Academy of Sciences
    Publication Date: 2011-07-06
    Description: National Academy of Sciences member Peter Gleick is cofounder and president of the Pacific Institute for Studies in Development, Environment, and Security in Oakland, California, where he explores new ways of thinking about water issues. His creative insights have resulted in the biennial book series The World’s Water, a MacArthur Fellowship award in 2003, multiple appearances as an expert witness before Congress and the courts, and the 2010 book Bottled and Sold: The Story Behind Our Obsession with Bottled Water. Peak water, the concept introduced in his PNAS Inaugural Article (1), became one of the New York Times’ “Words of...
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  • 50
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    National Academy of Sciences
    Publication Date: 2011-07-13
    Description: This year marks the 10th anniversary of the sequencing of the human genome. More than two decades after the launch of the Human Genome Project, researchers have made remarkable inroads into unraveling human biology, evolution, and disease. As the tools of genome sequencing and analysis grow more sophisticated, insights into the human genome will slowly shift the terrain in the treatment of disease. To be sure, the shift has already begun. Eric Lander, founding director of the Broad Institute of Harvard and Massachusetts Institute of Technology and a member of the National Academy of Sciences, offers PNAS readers his perspectives...
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  • 51
    Publication Date: 2011-09-14
    Description: Migrastatin is a biologically active natural product isolated from Streptomyces that has been shown to inhibit tumor cell migration. Upon completion of the first total synthesis of migrastatin, a number of structurally simplified analogs were prepared. Following extensive in vitro screening, a new generation of analogs was identified that demonstrates substantially higher levels of in vitro inhibitory activity, stability and synthetic accessibility when compared to the parent natural product. Herein, we describe two promising ether-derivative analogs, the migrastatin core ether (ME) and the carboxymethyl-ME (CME), which exhibit high efficacy in blocking tumor cell migration and metastasis in lung cancer. These compounds show an in vitro migration inhibition in the micromolar range (IC50: ME 1.5 to 8.2 μM, CME 0.5 to 5 μM). In a human small-cell lung carcinoma (SCLC) primary xenograft model, ME and CME compounds were found to be highly potent in inhibiting overall metastasis even at the lowest dosage used (degree of inhibition: 96.2% and 99.3%, respectively). Together these very encouraging findings suggest that these analogs have promise as potent antimetastatic agents in lung cancer.
    Keywords: Organic Synthesis Toward Small-Molecule Probes and Drugs Special Feature
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  • 52
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    National Academy of Sciences
    Publication Date: 2011-12-14
    Description: Prions defy molecular biology’s central dogma. Misfolded proteins that self-perpetuate, prions were first isolated in the early 1980s as the cause of a fatal sheep disease called scrapie. Since then, prions have been implicated in human neurodegenerative diseases, composing a rogue’s gallery of deadly disease agents. Susan Lindquist, a member of the National Academy of Sciences and a professor of biology at the Massachusetts Institute of Technology’s Whitehead Institute for Biomedical Research, has found that prions may have a little-appreciated positive side. Lindquist casts these seeming biochemical misfits in a surprising evolutionary role: Her studies have revealed that prions might...
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  • 53
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    National Academy of Sciences
    Publication Date: 2011-12-21
    Description: At the age of 37, David Baltimore accomplished what many researchers dream of but few achieve: reversing an entrenched dogma, eventually leading to a new view of life. In the early 1970s, Baltimore, a member of the National Academy of Sciences and a professor of biology at the California Institute of Technology, discovered reverse transcriptase—an enzyme found in some tumor viruses whose genetic code is written in the RNA alphabet. He found that reverse transcriptase can copy RNA into DNA, indicating that some viruses replicate via a DNA intermediate. The finding, which won Baltimore and others the 1975 Nobel Prize...
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  • 54
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    National Academy of Sciences
    Publication Date: 2011-12-21
    Description: On November 1, 2011, Inder Verma, a professor of molecular biology at the Salk Institute for Biological Studies in La Jolla, California and a member of the National Academy of Sciences since 1997, took the reins of PNAS as Editor-in-Chief. Verma succeeds University of California, Berkeley cell biologist Randy Schekman as leader of the journal. Verma received a PhD from the Weizmann Institute of Science in Israel and performed postdoctoral research in the laboratory of Nobel Laureate David Baltimore. Long recognized in the scientific community for his work in cancer genetics and gene therapy, Verma was most recently honored with...
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  • 55
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    National Academy of Sciences
    Publication Date: 2011-10-12
    Description: For more than a decade, developmental biologist Cynthia Kenyon has sought the essence of youth in the soil-dwelling roundworm Caenorhabditis elegans. Through her studies on genes that control aging in the worm, Kenyon, a member of the National Academy of Sciences and a professor of biochemistry at the University of California, San Francisco, joined the quest for immortality that has tickled the imagination of thinkers since time immemorial. Kenyon’s work has uncovered aging-related genes that affect physiological processes like metabolism, respiration, and reproduction. Contradictory reports of experimental compounds purported to extend life or delay aging in animals have often roiled...
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  • 56
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    National Academy of Sciences
    Publication Date: 2012-01-12
    Description: Nature is full of curves. So it is only natural that manmade devices meant to interact with nature emulate its elements of design. That is the line of reasoning behind the innovations of John Rogers, a member of the National Academy of Engineering and a professor of materials science at the University of Illinois, Urbana-Champaign. Rogers’ innovations have inspired an array of approaches to render supple rigid surfaces found in electronic devices. From stretchable electronic sensors that can be slapped onto human skin like removable tattoos to digital cameras that mimic the retina to create pin-sharp images, Rogers has attempted...
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  • 57
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    National Academy of Sciences
    Publication Date: 2012-02-01
    Description: The first carcinogenic virus was discovered in chickens in 1911. More than 70 years later, Harald zur Hausen demonstrated that human papillomavirus (HPV) can cause cervical cancer, for which he garnered the 2008 Nobel Prize in Medicine or Physiology. A professor emeritus at the German Cancer Research Center and recently elected member of the National Academy of Sciences, zur Hausen’s contributions to the field of virology have reshaped our understanding of the connections between infectious and chronic diseases. PNAS recently spoke with the Nobel laureate about HPV, undercooked beef, and scientific “dogma.”pnas;109/5/1378/UNFIG01F1unfig01Harald zur Hausen.PNAS:In general, how do viruses cause cancer?zur...
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  • 58
    Publication Date: 2014-11-26
    Description: DNA sequences called telomeres, located at the ends of chromosomes, fold into compact structures called G-quadruplexes. These structures are named for the four repeated sequences of the nucleotide guanine that characterize telomeric DNA and shape the folding of the quadruplex. Cynthia J. Burrows, a chemist at the University of Utah...
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  • 59
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    National Academy of Sciences
    Publication Date: 2014-09-03
    Description: Machines that can precisely recognize and decode human speech remain a largely unrealized challenge facing scientists and engineers. Yet infants below the age of one recognize and attempt to imitate the sounds of human speech even before they begin to grasp the meaning of words or produce them. Around 12...
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  • 60
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    National Academy of Sciences
    Publication Date: 2014-09-10
    Description: With the advent of rapid genome sequencing, the view of the human genome as a vast desert dotted with far-flung oases of functional genes has contended with a growing appreciation of the role of regulatory sequences in shaping gene expression. The fraction of the human genome’s noncoding component that can...
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  • 61
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    National Academy of Sciences
    Publication Date: 2014-10-15
    Description: The announcement in March 2014 that a telescope near the South Pole had detected possible evidence of gravitational waves brought renewed attention to inflationary theory, which describes the earliest moments of the universe. According to inflationary theory, exotic matter present at the birth of the universe exerted repulsive gravitational effects,...
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  • 62
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    National Academy of Sciences
    Publication Date: 2011-10-05
    Description: Experiences bridge brain circuitry with behavior, affecting our ability to learn and remember. By influencing the nature of neurotransmission across synapses—junctions between nerve cells—experiences can physically shape the mind. Those influences, collectively termed synaptic plasticity, have been a focus of study for neuroscientist Robert Malenka for more than two decades. Malenka, a member of the National Academy of Sciences, has uncovered molecular mechanisms underlying synaptic plasticity. Along the way, he has pinpointed changes in a raft of synaptic proteins that can alter the efficacy of neurotransmission across synapses. An offshoot of his studies on synaptic plasticity, Malenka’s work on how...
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  • 63
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    National Academy of Sciences
    Publication Date: 2014-06-04
    Description: When it comes to uncovering how the brain develops across the human lifespan, “change” may be the key word. Mounting evidence from molecular atlases of brain development suggests that the midgestational human brain markedly differs from the adult brain, undergoing wholesale transformation over time by tuning the timing and location...
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  • 64
    Publication Date: 2014-02-05
    Description: The scientific community is often overshadowed by competing interests when it comes to gaining public attention. As a result, scientific findings are sometimes not given due prominence, hindering their ability to inform and shape public opinion and public policy, say Davis Masten and Peter Zandan, members of the Presidents’ Circle...
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    National Academy of Sciences
    Publication Date: 2014-04-23
    Description: On July 1, 2014, Victor Dzau, the current chancellor of health affairs at Duke University, will relinquish his position at the university to begin the first day of his six-year term as President of the Institute of Medicine (IOM) of the United States National Academies. Dzau is a prominent figure...
    Keywords: QnAs
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    National Academy of Sciences
    Publication Date: 2014-07-02
    Description: If humans have a defensible claim of supremacy in the animal kingdom, it might lie in our superior cognitive abilities, which have endowed our species with unparalleled powers to probe our world. Those fundamental abilities—some shared with other species—help us make sense of space and number, use language, and forge...
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  • 67
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    National Academy of Sciences
    Publication Date: 2013-11-27
    Description: More than five decades after superconductivity was discovered, John Clarke’s graduate adviser, Brian Pippard, at Cambridge University proposed a novel device to measure minute voltages. Clarke, now a Professor of the Graduate School in the Department of Physics at the University of California, Berkeley, constructed such an ultrasensitive voltmeter based...
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    National Academy of Sciences
    Publication Date: 2013-07-31
    Description: Lynn M. Riddiford may not have become a developmental biologist had she not stumbled across an article in Seventeen magazine as a teenager. She read that the Roscoe B. Jackson Memorial Laboratory in Bar Harbor, Maine—1,500 miles from her parents’ farm in Illinois—had a summer research program for high school...
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    National Academy of Sciences
    Publication Date: 2014-11-19
    Description: In 2005, Hurricane Katrina, a massive Category 3 storm, slammed into New Orleans, destroying levees, flooding most of the city, and forcing the relocation of thousands of residents. Some of these residents had been participating in a study of the effects of community college on low-income parents. Katrina proved the...
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  • 70
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    National Academy of Sciences
    Publication Date: 2013-07-24
    Description: In May 2012 Arthur Beaudet, a geneticist at Baylor College of Medicine, Houston, TX, and a member of the National Academy of Sciences, reported a preliminary link between the deficiency of a gene that helps cells synthesize a biomolecule called carnitine and the risk of autism in some boys. Beaudet’s...
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    National Academy of Sciences
    Publication Date: 2012-10-31
    Description: Adrian Raftery has a penchant for probability. Over a three-decade career spanning several disciplines, Raftery, a professor of statistics and sociology at the University of Washington, Seattle, and a recently elected member of the National Academy of Sciences, has used statistical tools to unravel uncertainty in all manner of projections....
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  • 72
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    National Academy of Sciences
    Publication Date: 2013-07-10
    Description: In his scientific career, National Academy of Sciences member Detlef Weigel has gone from studying how fruit flies and flowers develop to investigating how plants adapt to different environments and the genomic variation that allows them to do so. Director of the Department of Molecular Biology at the Max Planck...
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    National Academy of Sciences
    Publication Date: 2012-04-04
    Description: Michael Gazzaniga began his career in neuroscience by studying how the human brain’s left and right hemispheres are specialized for different tasks. Over the years, those insights into brain function have fueled his interest in how the brain influences the mind. Gazzaniga, a professor of psychology at the University of California, Santa Barbara and a recently elected member of the National Academy of Sciences, has served on the US President’s Council on Bioethics and has authored several popular books that explore the links between the brain, behavior, and the law. As those links continue to burgeon, evidence based on neuroscience...
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    Publication Date: 2013-03-20
    Description: As a young resident doctor at France’s Hôpitaux de Paris in the 1970s, Philippe Sansonetti saw a lot of patients with infectious diseases, such as typhoid, whooping cough, and leprosy. Sansonetti and his colleagues treated those patients with antibiotics. By that point, however, the first signs of antibiotic resistance were...
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    National Academy of Sciences
    Publication Date: 2013-05-22
    Description: Psychologist Randolph Blake has been fascinated for most of his career by a form of perceptual magic called binocular rivalry: Dissimilar images presented simultaneously one to each eye take turns perceptually disappearing and reappearing unpredictably. Furthermore, it is impossible to hold just one of those images in conscious awareness indefinitely....
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    National Academy of Sciences
    Publication Date: 2014-05-07
    Description: The 2008 global financial crisis starkly demonstrated the breakdown of a large, complex system. Although the consequences were widespread, the crisis stemmed from the decisions of individuals within the system. For more than 40 years, National Academy of Sciences member Simon A. Levin, an ecologist at Princeton University, has studied...
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    National Academy of Sciences
    Publication Date: 2014-07-23
    Description: Over long years, neuroscientists have attempted to trace in cartographic detail the neural circuitry underlying goal-oriented movements, such as reaching, grasping, and handling objects. The modularity, precision, and smoothness of such movements arise from motor commands that descend from the brain to muscles, triggering rapid and continual feedback, which in...
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    National Academy of Sciences
    Publication Date: 2012-08-01
    Description: Most people can tell when their bodies are in the throes of an infection, but Bruce Beutler is on a mission to determine where and how this recognition actually begins, at the level of microbe-sensing immune cell molecules. A professor of immunology at the University of Texas Southwestern and a recently elected member of the National Academy of Sciences, Beutler shared the 2011 Nobel Prize in Physiology or Medicine for demonstrating an infection-sensing role for the mammalian immune cell-surface receptor, TLR4. This protein activates the innate immune response—the body’s primary line of defense against pathogens—upon detecting LPS, a structural component...
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    National Academy of Sciences
    Publication Date: 2012-08-08
    Description: Kendall Houk, a recently elected member of the National Academy of Sciences and the Winstein Chair in Organic Chemistry at the University of California, Los Angeles, uses computational and theoretical chemistry to illuminate the underlying rules of organic and synthetic chemistry. By understanding how basic chemical reactions work, Houk can design molecules and enzymes to catalyze increasingly complex reactions. In his Inaugural Article, Houk uses molecular dynamics techniques to study the intricate underpinnings of the Diels-Alder reaction, a classic organic chemistry phenomenon first described in the 1920s. Here, he describes how theoretical and computational chemistry, bolstered by major advances in...
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    National Academy of Sciences
    Publication Date: 2013-01-04
    Description: When Benjamin Santer began studying the Earth’s climate in the late 1970s, he simply wanted to understand the links between human behavior and global climate change. Computer models and statistical analysis enabled him to measure this relationship. By developing “fingerprints” that distinguish between human and natural influences on climate, Santer,...
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    National Academy of Sciences
    Publication Date: 2012-12-27
    Description: The mutations linking animal form and function almost always have intriguing back stories, says Leif Andersson, a professor of functional genomics at Uppsala University, Sweden and a recently elected foreign associate of the National Academy of Sciences. Andersson’s research explores the genetic changes underlying phenotypic diversity in horses, pigs, dogs,...
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    National Academy of Sciences
    Publication Date: 2013-09-04
    Description: Ronald DePinho has spent most of his waking hours trying to unlock the genetic secrets of aging and cancer. Over the years, DePinho, president of the University of Texas M.D. Anderson Cancer Center in Houston, TX, and a recently elected member of the National Academy of Sciences, has come to...
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    National Academy of Sciences
    Publication Date: 2013-08-21
    Description: The science of human decision-making has long been a stronghold of psychologists. Among the voices that abound in the literature on how people make choices, one scholarly voice has remained strident through several decades. By studying human behavior through the lens of economics, Princeton University psychologist Daniel Kahneman has shown...
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    National Academy of Sciences
    Publication Date: 2014-01-29
    Description: Chemical ecologist Ian T. Baldwin has devoted his career to understanding the traits that allow plants to survive in the wild. The founding director of the Max Planck Institute for Chemical Ecology in Jena, Germany, and current head of its department of molecular ecology, Baldwin has developed a molecular toolbox...
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    National Academy of Sciences
    Publication Date: 2013-12-04
    Description: Since time immemorial, the fallibility of human memory has fascinated intellectuals in many fields of human endeavor. In his book The Seven Sins of Human Memory, a popular tome of scholarly work aimed at a general audience, Harvard University psychologist Daniel Schacter, a recently elected member of the National Academy...
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