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  • 1
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    transcript Verlag - Bielefeld University Press
    Publication Date: 2021-12-16
    Description: The rise of the term "environment" to describe the present marks the influence that reflection on environmental relations and the possibility of engineering artificial environments have gained since the mid-nineteenth century. In closed artificial worlds such as space stations or artificial ecosystems, the entanglement of the "environment" with the surrounding organisms becomes the subject of a biopolitics that today opens up new spaces in autonomous environmental control technologies. Florian Sprenger pursues this transformation of ecological environmental knowledge with the aim of better understanding current technologies, making the term understandable and highlighting the biopolitical dimension of each ecology.
    Description: Der Aufstieg des Begriffs »Environment« zur Beschreibung der Gegenwart markiert den Einfluss, den das Nachdenken über Umgebungsrelationen und die Möglichkeit der technischen Gestaltung künstlicher Umgebungen seit Mitte des 19. Jahrhunderts gewonnen haben. In geschlossenen artifiziellen Welten wie Raumstationen oder künstlichen Ökosystemen wird die Verschränkung des »Environments« mit den umgebenen Organismen zum Gegenstand einer Biopolitik, die heute in autonomen Technologien der Umgebungskontrolle neue Räume erschließt. Florian Sprenger verfolgt diese Transformation ökologischen Umgebungswissens mit dem Ziel, gegenwärtige Technologien besser zu verstehen, den Begriff unselbstverständlich zu machen und die biopolitische Dimension jeder Ökologie herauszuarbeiten.
    Keywords: Media ; Technology ; Ecology ; Environment ; Biopolitics ; Surrounding ; Artificiality ; Organism ; Environmental Knowledge ; Science ; Media Theory ; History of Science ; Media Studies ; Medien ; Technik ; Ökologie ; Environment ; Biopolitik ; Umgebung ; Künstlichkeit ; Organismus ; Autonome Technologie ; Umgebungswissen ; Wissenschaft ; Medientheorie ; Wissenschaftsgeschichte ; Medienwissenschaft ; bic Book Industry Communication::J Society & social sciences::JF Society & culture: general::JFD Media studies
    Language: German
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  • 2
    Publication Date: 2021-05-19
    Description: Sponges are very primitive multicellular organisms that belong to phylum Porifera; they are sessile and live attached to different types of hard and soft substrates. Sponges have different shapes and colours and very varied sizes, from a few millimetres to more than 2 m in height. They inhabit mainly in the marine environment at different depths. This chapter describes the general biological characteristics of sponges, their properties, uses and applications. Moreover, this study discusses a commercial fishery analysis of this natural resource in Cuba during the period 1970–2017, as well as the different characteristics of their natural populations subjected to commercial extraction. The applied techniques for aquaculture, harvest and postharvest processing are reviewed, including those procedures adapted from other countries or locally developed by Cuban fishermen. Finally, this study examines the challenges and perspectives of this productive activity with a long-term eco-sustainable approach.
    Description: Published
    Keywords: Sponges ; Ecology ; Aquaculture ; Production
    Repository Name: AquaDocs
    Type: Book Section , Refereed
    Format: 15pp.
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  • 3
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 43 no. 1, pp. i-ii
    Publication Date: 2024-01-12
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Fusarium
    Repository Name: National Museum of Natural History, Netherlands
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  • 4
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 43 no. 1, pp. 186-221
    Publication Date: 2024-01-12
    Description: The Fusarium incarnatum-equiseti species complex (FIESC) is a phylogenetically species-rich complex \nthat includes over 30 cryptic phylogenetic species, making identification based on phenotypic characters problematic. Several established Fusarium species known to reside in the FIESC lack type material, further complicating \nthe use of Latin binomials for this complex. To overcome this problem, an informal classification system based \non a haplotype nomenclature was introduced to improve communication between researchers in various fields. \nHowever, some conflicts in the application of this nomenclature system have arisen. To date, 16 phylo-species in \nthe FIESC have been provided with Latin binomials with approximately 18 FIESC phylo-species still lacking Latin \nbinomials, the majority of which reside in the Incarnatum clade. The aim of this study is to introduce Latin binomials for the unnamed FIESC phylo-species based on phylogenetic inference supported by phenotypic characters. \nThe three-gene (calmodulin, RNA polymerase II second largest subunit and translations elongation factor 1-alpha) \nphylogenetic inference resolved 47 lineages, of which 44 belonged to the FIESC. The F. camptoceras species \ncomplex (FCAMSC) is introduced here for three lineages that are distinct from the FIESC. Epitypes are designated \nfor F. compactum, F. incarnatum and F. scirpi, and a neotype for F. camptoceras. Latin binomials are provided for \n20 of these newly resolved phylo-species in the FIESC.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; morphology ; new taxa ; phylogenetic species ; phylogeny
    Repository Name: National Museum of Natural History, Netherlands
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  • 5
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 43 no. 1, pp. 90-185
    Publication Date: 2024-01-12
    Description: The genus Neocosmospora (Fusarium solani species complex) contains saprobes, plant endophytes \nand pathogens of major economic significance as well as opportunistic animal pathogens. Advances in biological \nand phylogenetic species recognition revealed a rich species diversity which has largely remained understudied. \nMost of the currently recognised species lack formal descriptions and Latin names, while the taxonomic utility of old \nnames is hampered by the lack of nomenclatural type specimens. Therefore, to stabilise the taxonomy and nomenclature of these important taxa, we examined type specimens and representative cultures of several old names by \nmeans of morphology and phylogenetic analyses based on rDNA (ITS and LSU), rpb2 and tef1 sequences. Sixtyeight species are accepted in Neocosmospora, 29 of them described herein as new; while 13 new combinations \nare made. Eleven additional phylogenetic species are recognized, but remain as yet undescribed. Lectotypes are \nproposed for eight species, seven species are epitypified and two species are neotypified. Notes on an additional \n17 doubtful or excluded taxa are provided.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Fusarium ; new taxa ; systematics ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 6
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    American Society of Parasitologists
    In:  Journal of Parasitology vol. 105 no. 1, pp. 45-51
    Publication Date: 2024-01-12
    Description: In this paper 4 species of bat ectoparasites are recorded from the island of Sint Eustatius, Dutch Caribbean. One species of true bug (Hemiptera: Polyctenidae) as well as 3 species of bat flies (Diptera: Hippoboscidae: Streblinae) are recorded. All species are photographed. The first DNA barcodes for 3 bat ectoparasite species (Trichobius frequens, Trichobius intermedius, and Hesperoctenes fumarius) have been posted to the BOLD database; DNA barcode sequences for a fourth species (Megistopoda aranea) are the first from a Caribbean island.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Parasitology
    Repository Name: National Museum of Natural History, Netherlands
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  • 7
    Publication Date: 2024-04-02
    Description: Novel species of fungi described in this study include those from various countries as follows: Antarctica, Apenidiella antarctica from permafrost, Cladosporium fildesense from an unidentified marine sponge. Argentina, Geastrum wrightii on humus in mixed forest. Australia, Golovinomyces glandulariae on Glandularia aristigera, Neoanungitea eucalyptorum on leaves of Eucalyptus grandis, Teratosphaeria corymbiicola on leaves of Corymbia ficifolia, Xylaria eucalypti on leaves of Eucalyptus radiata. Brazil, Bovista psammophila on soil, Fusarium awaxy on rotten stalks of Zea mays, Geastrum lanuginosum on leaf litter covered soil, Hermetothecium mikaniae-micranthae (incl. Hermetothecium gen. nov.) on Mikania micrantha, Penicillium reconvexovelosoi in soil, Stagonosporopsis vannaccii from pod of Glycine max. British Virgin Isles, Lactifluus guanensis on soil. Canada, Sorocybe oblongispora on resin of Picea rubens. Chile, Colletotrichum roseum on leaves of Lapageria rosea. China, Setophoma caverna from carbonatite in Karst cave. Colombia, Lareunionomyces eucalypticola on leaves of Eucalyptus grandis. Costa Rica, Psathyrella pivae on wood. Cyprus, Clavulina iris on calcareous substrate. France, Chromosera ambigua and Clavulina iris var. occidentalis on soil. French West Indies, Helminthosphaeria hispidissima on dead wood. Guatemala, Talaromyces guatemalensis in soil. Malaysia, Neotracylla pini (incl. Tracyllales ord. nov. and Neotracylla gen. nov.) and Vermiculariopsiella pini on needles of Pinus tecunumanii. New Zealand, Neoconiothyrium viticola on stems of Vitis vinifera, Parafenestella pittospori on Pittosporum tenuifolium, Pilidium novae-zelandiae on Phoenix sp. Pakistan, Russula quercus-floribundae on forest floor. Portugal, Trichoderma aestuarinum from saline water. Russia, Pluteus liliputianus on fallen branch of deciduous tree, Pluteus spurius on decaying deciduous wood or soil. South Africa, Alloconiothyrium encephalarti, Phyllosticta encephalarticola and Neothyrostroma encephalarti (incl. Neothyrostroma gen. nov.) on leaves of Encephalartos sp., Chalara eucalypticola on leaf spots of Eucalyptus grandis × urophylla, Clypeosphaeria oleae on leaves of Olea capensis, Cylindrocladiella postalofficium on leaf litter of Sideroxylon inerme, Cylindromonium eugeniicola (incl. Cylindromonium gen. nov.) on leaf litter of Eugenia capensis, Cyphellophora goniomatis on leaves of Gonioma kamassi, Nothodactylaria nephrolepidis (incl. Nothodactylaria gen. nov. and Nothodactylariaceae fam. nov.) on leaves of Nephrolepis exaltata, Falcocladium eucalypti and Gyrothrix eucalypti on leaves of Eucalyptus sp., Gyrothrix oleae on leaves of Olea capensis subsp. macrocarpa, Harzia metrosideri on leaf litter of Metrosideros sp., Hippopotamyces phragmitis (incl. Hippopotamyces gen. nov.) on leaves of Phragmites australis, Lectera philenopterae on Philenoptera violacea, Leptosillia mayteni on leaves of Maytenus heterophylla, Lithohypha aloicola and Neoplatysporoides aloes on leaves of Aloe sp., Millesimomyces rhoicissi (incl. Millesimomyces gen. nov.) on leaves of Rhoicissus digitata, Neodevriesia strelitziicola on leaf litter of Strelitzia nicolai, Neokirramyces syzygii (incl. Neokirramyces gen. nov.) on leaf spots of Syzygium sp., Nothoramichloridium perseae (incl. Nothoramichloridium gen. nov. and Anungitiomycetaceae fam. nov.) on leaves of Persea americana, Paramycosphaerella watsoniae on leaf spots of Watsonia sp., Penicillium cuddlyae from dog food, Podocarpomyces knysnanus (incl. Podocarpomyces gen. nov.) on leaves of Podocarpus falcatus, Pseudocercospora heteropyxidicola on leaf spots of Heteropyxis natalensis, Pseudopenidiella podocarpi, Scolecobasidium podocarpi and Ceramothyrium podocarpicola on leaves of Podocarpus latifolius, Scolecobasidium blechni on leaves of Blechnum capense, Stomiopeltis syzygii on leaves of Syzygium chordatum, Strelitziomyces knysnanus (incl. Strelitziomyces gen. nov.) on leaves of Strelitzia alba, Talaromyces clemensii from rotting wood in goldmine, Verrucocladosporium visseri on Carpobrotus edulis. Spain, Boletopsis mediterraneensis on soil, Calycina cortegadensisi on a living twig of Castanea sativa, Emmonsiellopsis tuberculata in fluvial sediments, Mollisia cortegadensis on dead attached twig of Quercus robur, Psathyrella ovispora on soil, Pseudobeltrania lauri on leaf litter of Laurus azorica, Terfezia dunensis in soil, Tuber lucentum in soil, Venturia submersa on submerged plant debris. Thailand, Cordyceps jakajanicola on cicada nymph, Cordyceps kuiburiensis on spider, Distoseptispora caricis on leaves of Carex sp., Ophiocordyceps khonkaenensis on cicada nymph. USA, Cytosporella juncicola and Davidiellomyces juncicola on culms of Juncus effusus, Monochaetia massachusettsianum from air sample, Neohelicomyces melaleucae and Periconia neobrittanica on leaves of Melaleuca styphelioides × lanceolata, Pseudocamarosporium eucalypti on leaves of Eucalyptus sp., Pseudogymnoascus lindneri from sediment in a mine, Pseudogymnoascus turneri from sediment in a railroad tunnel, Pulchroboletus sclerotiorum on soil, Zygosporium pseudomasonii on leaf of Serenoa repens. Vietnam, Boletus candidissimus and Veloporphyrellus vulpinus on soil. Morphological and culture characteristics are supported by DNA barcodes.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; ITS nrDNA barcodes ; LSU ; new taxa ; systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 8
    Publication Date: 2024-04-02
    Description: Novel species of fungi described in this study include those from various countries as follows: Australia, Chaetomella pseudocircinoseta and Coniella pseudodiospyri on Eucalyptus microcorys leaves, Cladophialophora eucalypti, Teratosphaeria dunnii and Vermiculariopsiella dunnii on Eucalyptus dunnii leaves, Cylindrium grande and Hypsotheca eucalyptorum on Eucalyptus grandis leaves, Elsinoe salignae on Eucalyptus saligna leaves, Marasmius lebeliae on litter of regenerating subtropical rainforest, Phialoseptomonium eucalypti (incl. Phialoseptomonium gen. nov.) on Eucalyptus grandis × camaldulensis leaves, Phlogicylindrium pawpawense on Eucalyptus tereticornis leaves, Phyllosticta longicauda as an endophyte from healthy Eustrephus latifolius leaves, Pseudosydowia eucalyptorum on Eucalyptus sp. leaves, Saitozyma wallum on Banksia aemula leaves, Teratosphaeria henryi on Corymbia henryi leaves. Brazil, Aspergillus bezerrae, Backusella azygospora, Mariannaea terricola and Talaromyces pernambucoensis from soil, Calonectria matogrossensis on Eucalyptus urophylla leaves, Calvatia brasiliensis on soil, Carcinomyces nordestinensis on Bromelia antiacantha leaves, Dendryphiella stromaticola on small branches of an unidentified plant, Nigrospora brasiliensis on Nopalea cochenillifera leaves, Penicillium alagoense as a leaf endophyte on a Miconia sp., Podosordaria nigrobrunnea on dung, Spegazzinia bromeliacearum as a leaf endophyte on Tilandsia catimbauensis, Xylobolus brasiliensis on decaying wood. Bulgaria, Kazachstania molopis from the gut of the beetle Molops piceus. Croatia, Mollisia endocrystallina from a fallen decorticated Picea abies tree trunk. Ecuador, Hygrocybe rodomaculata on soil. Hungary, Alfoldia vorosii (incl. Alfoldia gen. nov.) from Juniperus communis roots, Kiskunsagia ubrizsyi (incl. Kiskunsagia gen. nov.) from Fumana procumbens roots. India, Aureobasidium tremulum as laboratory contaminant, Leucosporidium himalayensis and Naganishia indica from windblown dust on glaciers. Italy, Neodevriesia cycadicola on Cycas sp. leaves, Pseudocercospora pseudomyrticola on Myrtus communis leaves, Ramularia pistaciae on Pistacia lentiscus leaves, Neognomoniopsis quercina (incl. Neognomoniopsis gen. nov.) on Quercus ilex leaves. Japan, Diaporthe fructicola on Passiflora edulis × P. edulis f. flavicarpa fruit, Entoloma nipponicum on leaf litter in a mixed Cryptomeria japonica and Acer spp. forest. Macedonia, Astraeus macedonicus on soil. Malaysia, Fusicladium eucalyptigenum on Eucalyptus sp. twigs, Neoacrodontiella eucalypti (incl. Neoacrodontiella gen. nov.) on Eucalyptus urophylla leaves. Mozambique, Meliola gorongosensis on dead Philenoptera violacea leaflets. Nepal, Coniochaeta dendrobiicola from Dendriobium lognicornu roots. New Zealand, Neodevriesia sexualis and Thozetella neonivea on Archontophoenix cunninghamiana leaves. Norway, Calophoma sandfjordenica from a piece of board on a rocky shoreline, Clavaria parvispora on soil, Didymella finnmarkica from a piece of Pinus sylvestris driftwood. Poland, Sugiyamaella trypani from soil. Portugal, Colletotrichum feijoicola from Acca sellowiana. Russia, Crepidotus tobolensis on Populus tremula debris, Entoloma ekaterinae, Entoloma erhardii and Suillus gastroflavus on soil, Nakazawaea ambrosiae from the galleries of Ips typographus under the bark of Picea abies. Slovenia, Pluteus ludwigii on twigs of broadleaved trees. South Africa, Anungitiomyces stellenboschiensis (incl. Anungitiomyces gen. nov.) and Niesslia stellenboschiana on Eucalyptus sp. leaves, Beltraniella pseudoportoricensis on Podocarpus falcatus leaf litter, Corynespora encephalarti on Encephalartos sp. leaves, Cytospora pavettae on Pavetta revoluta leaves, Helminthosporium erythrinicola on Erythrina humeana leaves, Helminthosporium syzygii on a Syzygium sp. bark canker, Libertasomyces aloeticus on Aloe sp. leaves, Penicillium lunae from Musa sp. fruit, Phyllosticta lauridiae on Lauridia tetragona leaves, Pseudotruncatella bolusanthi (incl. Pseudotruncatellaceae fam. nov.) and Dactylella bolusanthi on Bolusanthus speciosus leaves. Spain, Apenidiella foetida on submerged plant debris, Inocybe grammatoides on Quercus ilex subsp. ilex forest humus, Ossicaulis salomii on soil, Phialemonium guarroi from soil. Thailand, Pantospora chromolaenae on Chromolaena odorata leaves. Ukraine, Cadophora helianthi from Helianthus annuus stems. USA, Boletus pseudopinophilus on soil under slash pine, Botryotrichum foricae, Penicillium americanum and Penicillium minnesotense from air. Vietnam, Lycoperdon vietnamense on soil. Morphological and culture characteristics are supported by DNA barcodes.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; ITS nrDNA barcodes ; LSU ; new taxa ; systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 9
    Publication Date: 2024-04-18
    Description: Since the introduction of non-native rodents to the Caribbean region, these invaders have successfully occupied many, if not most, islands where they pose tremendous threats to native biodiversity and ecosystems. The objective of our study was to conduct a preliminary assessment of the relative abundance of invasive alien rodents in different vegetation types on the small Caribbean island of St. Eustatius, which has no native rodent species. We used tracking tunnels (baited ink cards placed in tunnels to identify the prints of animals lured to the card) to determine the presence of rodent species. We collected data in 25 x 25 m (n = 13) and 5 x 5m (n = 130) plots to determine whether elevation, number of tree species, canopy cover or other microhabitat components were correlated with rodent relative abundance. Invasive rodents are present in varying relative abundances in rural areas on St. Eustatius. House mice (Mus musculus) were not recorded inside the terrestrial protected areas, whereas black rats (Rattus rattus) were detected in all elevations and all but one vegetation type sampled. We determined significant correlations between some of the habitat characteristics, especially elevation, canopy height, leaf litter cover and number of tree species, which showed significant collinearity with 27 of 45 pairwise comparisons. There was a significant correlation between rodent relative abundance and the number of tree species, but not between elevation, number of living trees, number of shrubs, rainfall, canopy cover, canopy height, leaf litter cover, leaf litter depth, or slope. There was a significant difference within vegetation types for the frequency of traps containing rat versus mouse tracks. Our study was impacted by two major hurricanes in September 2017.
    Keywords: Nature and Landscape Conservation ; Ecology ; Ecology ; Evolution ; Behavior and Systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 10
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 45, pp. 46-67
    Publication Date: 2024-05-09
    Description: Strains with a yeast-like appearance were frequently collected in two surveys on the biodiversity of fungi in Germany, either associated with necroses in wood of Prunus trees in orchards in Saxony, Lower Saxony and Baden-Württemberg or captured in spore traps mounted on grapevine shoots in a vineyard in Rhineland-Palatinate. The morphology of the strains was reminiscent of the genus Collophorina: all strains produced aseptate conidia on integrated conidiogenous cells directly on hyphae, on discrete phialides, adelophialides and by microcyclic conidiation, while in some strains additionally endoconidia or conidia in conidiomata were observed. Blastn searches with the ITS region placed the strains in the Leotiomycetes close to Collophorina spp. Analyses based on morphological and multi-locus sequence data (LSU, ITS, EF-1α, GAPDH) revealed that the 152 isolates from wood of Prunus spp. belong to five species including C. paarla, C. africana and three new species. A further ten isolates from spore traps belonged to seven new species, of which one was isolated from Prunus wood as well. However, a comparison with both LSU and ITS sequence data of these collophorina-like species with reference sequences from further Leotiomycetes revealed the genus Collophorina to be polyphyletic and the strains to pertain to several genera within the Phacidiales. Collophorina paarla and C. euphorbiae are transferred to the newly erected genera Pallidophorina and Ramoconidiophora, respectively. The new genera Capturomyces, Variabilispora and Vexillomyces are erected to accommodate five new species isolated from spore traps. In total nine species were recognised as new to science and described as Collophorina badensis, C. germanica, C. neorubra, Capturomyces funiculosus, Ca. luteus, Tympanis inflata, Variabilispora flava, Vexillomyces palatinus and V. verruculosus.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Collophora ; morphology ; multi-locus phylogeny ; new taxa ; species diversity ; systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 11
    Publication Date: 2024-05-09
    Description: Ambrosia beetles farm specialised fungi in sapwood tunnels and use pocket-like organs called mycangia to carry propagules of the fungal cultivars. Ambrosia fungi selectively grow in mycangia, which is central to the symbiosis, but the history of coevolution between fungal cultivars and mycangia is poorly understood. The fungal family Ceratocystidaceae previously included three ambrosial genera (Ambrosiella, Meredithiella, and Phialophoropsis), each farmed by one of three distantly related tribes of ambrosia beetles with unique and relatively large mycangium types. Studies on the phylogenetic relationships and evolutionary histories of these three genera were expanded with the previously unstudied ambrosia fungi associated with a fourth mycangium type, that of the tribe Scolytoplatypodini. Using ITS rDNA barcoding and a concatenated dataset of six loci (28S rDNA, 18S rDNA, tef1-α, tub, mcm7, and rpl1), a comprehensive phylogeny of the family Ceratocystidaceae was developed, including Inodoromyces interjectus gen. & sp. nov., a non-ambrosial species that is closely related to the family. Three minor morphological variants of the pronotal disk mycangium of the Scolytoplatypodini were associated with ambrosia fungi in three respective clades of Ceratocystidaceae: Wolfgangiella gen. nov., Toshionella gen. nov., and Ambrosiella remansi sp. nov. Closely-related species that are not symbionts of ambrosia beetles are accommodated by Catunica adiposa gen. & comb. nov. and Solaloca norvegica gen. & comb. nov. The divergent morphology of the ambrosial genera and their phylogenetic placement among non-ambrosial genera suggest three domestication events in the Ceratocystidaceae. Estimated divergence dates for the ambrosia fungi and mycangia suggest that Scolytoplatypodini mycangia may have been the first to acquire Ceratocystidaceae symbionts and other ambrosial fungal genera emerged shortly after the evolution of new mycangium types. There is no evidence of reversion to a non-ambrosial lifestyle in the mycangial symbionts.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; 14 new taxa ; Microascales ; Scolytinae ; symbiosis ; two new typifications
    Repository Name: National Museum of Natural History, Netherlands
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  • 12
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 44, pp. 67-97
    Publication Date: 2024-05-02
    Description: Mucor species are common soil fungi but also known as agents of human infections (mucormycosis) and used in food production and biotechnology. Mucor circinelloides is the Mucor species that is most frequently isolated from clinical sources. The taxonomy of Mucor circinelloides and its close relatives (Mucor circinelloides complex – MCC) is still based on morphology and mating behaviour. The aim of the present study was a revised taxonomy of the MCC using a polyphasic approach. Using a set of 100 strains molecular phylogenetic analysis of five markers (ITS, rpb1, tsr1, mcm7, and cfs, introduced here) were performed, combined with phenotypic studies, mating tests and the determination of the maximum growth temperatures. The multi-locus analyses revealed 16 phylogenetic species of which 14 showed distinct phenotypical traits and were recognised as discrete species. Five of these species are introduced as novel taxa: M. amethystinus sp. nov., M. atramentarius sp. nov., M. variicolumellatus sp. nov., M. pseudocircinelloides sp. nov., and M. pseudolusitanicus sp. nov. The former formae of M. circinelloides represent one or two separate species. In the MCC, the simple presence of well-shaped zygospores only indicates a close relation of both strains, but not necessarily conspecificity. Seven species of the MCC have been implemented in human infection: M. circinelloides, M. griseocyanus, M. janssenii, M. lusitanicus, M. ramosissimus, M. variicolumellatus, and M. velutinosus
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; mating tests ; maximum growth temperature ; Mucor ; mucormycosis ; new taxa ; phylogeny ; taxonomy ; zygospore formation
    Repository Name: National Museum of Natural History, Netherlands
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  • 13
    Publication Date: 2024-05-06
    Description: Molecular phylogenetic analyses have addressed the systematic position of several major Northern Hemisphere lineages of Pezizales but the taxa of the Southern Hemisphere remain understudied. This study focuses on the molecular systematics and taxonomy of Southern Hemisphere species currently treated in the genera Underwoodia and Gymnohydnotrya. Species in these genera have been identified as the monophyletic /gymnohydnotrya lineage, but no further research has been conducted to determine the evolutionary origin of this lineage or its relationship with other Pezizales lineages. Here, we present a phylogenetic study of fungal species previously described in Underwoodia and Gymnohydnotrya, with sampling of all but one described species. We revise the taxonomy of this lineage and describe three new species from the Patagonian region of South America. Our results show that none of these Southern Hemisphere species are closely related to Underwoodia columnaris, the type species of the genus Underwoodia. Accordingly, we recognize the genus Geomorium described by Spegazzini in 1922 for G. fuegianum. We propose the new family, Geomoriaceae fam. nov., to accommodate this phylogenetically and morphologically unique Southern Hemisphere lineage. Molecular dating estimated that Geomoriaceae started to diverge from its sister clade Tuberaceae c. 112 MYA, with a crown age for the family in the late Cretaceous (c. 67 MYA). This scenario fits well with a Gondwanan origin of the family before the split of Australia and South America from Antarctica during the Paleocene-Eocene boundary (c. 50 MYA).
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Geomoriaceae ; Helvellaceae ; Patagonia ; South American fungi ; truffle systematics ; Tuberaceae
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  • 14
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 44, pp. 140-160
    Publication Date: 2024-05-06
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Clavicipitaceae ; Cordycipitaceae ; entomopathogenic fungi ; new taxa ; Ophiocordycipitaceae ; taxonomy
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  • 15
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 44, pp. 206-239
    Publication Date: 2024-05-08
    Description: Amauroderma s.lat. has been defined mainly by the morphological features of non-truncate and doublewalled basidiospores with a distinctly ornamented endospore wall. In this work, taxonomic and phylogenetic studies on species of Amauroderma s.lat. are carried out by morphological examination together with ultrastructural observations, and molecular phylogenetic analyses of multiple loci including the internal transcribed spacer regions (ITS), the large subunit of nuclear ribosomal RNA gene (nLSU), the largest subunit of RNA polymerase II (RPB1) and the second largest subunit of RNA polymerase II (RPB2), the translation elongation factor 1-α gene (TEF) and the β-tubulin gene (TUB). The results demonstrate that species of Ganodermataceae formed ten clades. Species previously placed in Amauroderma s.lat. are divided into four clades: Amauroderma s.str., Foraminispora, Furtadoa and a new genus Sanguinoderma. The classification of Amauroderma s.lat. is thus revised, six new species are described and illustrated, and eight new combinations are proposed. SEM micrographs of basidiospores of Foraminispora and Sanguinoderma are provided, and the importance of SEM in delimitation of taxa in this study is briefly discussed. Keys to species of Amauroderma s.str., Foraminispora, Furtadoa, and Sanguinoderma are also provided.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Ganodermataceae ; morphology ; phylogeny ; Polyporales ; ultrastructure
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  • 16
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    Naturalis Biodiversity Center
    In:  Persoonia - Molecular Phylogeny and Evolution of Fungi vol. 44, pp. 113-139
    Publication Date: 2024-05-08
    Description: Strobilomyces is broadly distributed geographically and serves an important ecological function. However, it has been difficult to delimit species within the genus, primarily due to developmental variations and phenotypic plasticity. To elucidate phylogenetic relationships among species within the genus and to understand its species diversity, especially in Asia, materials of the genus collected from five continents (Africa, Asia, Australia, Europe, and North/Central America) were investigated. The phylogeny of Strobilomyces was reconstructed based on nucleotide sequences of four genes coding for: the largest and the second largest subunits of the RNA polymerase II (RPB1 and RPB2); the translation elongation factor subunit 1-α (TEF1); and the mitochondrial cytochrome oxidase subunit 3 (COX3). The combined results based on molecular phylogenetics, morphological characters, host tree associations, and geographical distribution patterns support a new classification consisting of two sections, sect. Strobilomyces and sect. Echinati. Using the genealogical concordance phylogenetic species recognition (GCPSR) approach, at least 33 phylogenetic species in Asia can be delimited, all of which are supported by morphological features, and five phylogenetic species remain to be described. The mountainous region of Southwest China is especially special, containing at least 21 species and likely represents a centre of diversification. We further compared our specimens with the type specimens of 25 species of Strobilomyces. Our comparisons suggest that, there are a total of 31 distinct species, while S. sanmingensis, S. verruculosus, S. subnigricans, and S. zangii/S. areolatus, are synonyms of S. mirandus, S. giganteus, S. alpinus and S. seminudus, respectively. Eight new species, namely, S. albidus, S. anthracinus, S. calidus, S. cingulatus, S. densisquamosus, S. douformis, S. microreticulatus and S. pinophilus, are described. A dichotomous key to the Asian Strobilomyces species is provided.
    Keywords: Ecology ; Evolution ; Behavior and Systematics ; Boletes ; ectomycorrhizal fungi ; infrageneric treatment ; morphological characters ; taxonomy
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  • 17
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 3, pp. 195-213
    Publication Date: 2024-06-12
    Description: A taxonomic revision of the genus Scleria (Cyperoideae, Cyperaceae) in Madagascar is presented. Herbarium specimens have been examined and 422 identified to species level. Our results recognise 25 species of Scleria from Madagascar, plus an additional heterotypic variety. Eight species are endemic to Madagascar, two are near endemic, eight taxa are also found on mainland Africa, and eight are widespread tropical taxa. Scleria achtenii is reported from Madagascar for the first time, and S. rosea is accepted at species level instead of being considered as a synonym of S. trialata. Distribution maps, conservation assessments, and notes on synonymy, ecology and ethnobotany are provided. Fourty-seven names are typified. Three rare endemic species: S. andringitrensis, S. madagascariensis and S. perpusilla, are assessed as threatened; and a recently described species, S. ankaratrensis, is indicated as Data Deficient. The most species-rich infrageneric taxa, sections Hypoporum, Abortivae and Foveolidia include 18 taxa in total, and showed strong differences in habitat preference.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; conservation ; Cyperaceae ; endemic species ; identification key ; Madagascar ; revision ; Scleria
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  • 18
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 3, pp. 216-224
    Publication Date: 2024-06-15
    Description: Two new species of Inversodicraea, I. koukoutamba and I. tassing, both from the Republic of Guinea, are described as new to science, increasing the number of species known in this African genus to 32, making it the most species-diverse among African Podostemaceae. Both species are remarkable, among other features, for their styles. Inversodicraea koukoutamba is only the third species of the genus with 3, not 2 styles, and is unique in the genus, and in the family, in having each style bifurcate. Inversodicraea tassing has styles equal or exceeding the length of the ovary, being nearly twice as long as those of the species which previously was noted for the longest styles in the genus. Both new species are single-site endemics, the first is assessed here as Critically Endangered according to the IUCN 2012 standard, due to the incipient construction of the World Bank backed Koukoutamba hydroelectric dam which threatens several other plant species assessed as Critically Endangered or Endangered. The second species, I. tassing, is assessed as Near Threatened, since there are currently no threats known at present to the single known site.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Bafing River ; conservation ; dams ; extinct ; Guinea ; hydroelectricity ; OMVS ; waterfalls ; World Bank
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  • 19
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 3, pp. 272-274
    Publication Date: 2024-06-20
    Description: The genus Lespedeza is revised for the Flora Malesiana region. Differences between Lespedeza and Campylotropis are briefly discussed. The two genera are united and treated as one genus: Lespedeza. Two species are present in Malesia. A key to the species and some notes are provided.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Campylotropis ; Fabaceae ; Flora Malesiana ; Lespedeza ; Southeast Asia ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 20
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 2, pp. iii-iv
    Publication Date: 2024-06-21
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 21
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 2, pp. 183-185
    Publication Date: 2024-06-25
    Description: Schisandra cauliflora, a new species found in northern Vietnam and described here is referable to Schisandra subg. Sphaerostema. A morphological comparison with related species, and a key to species in the subgenus is provided.Adescription including details of distribution and habitat is supplemented with a line-drawing.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; northern Vietnam ; Schisandra ; Schisandra cauliflora ; Schisandraceae ; Sphaerostema
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  • 22
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 3, pp. 231-252
    Publication Date: 2024-06-25
    Description: Within the morphologically diverse pantropical genus Phyllanthus, many subgenera, sections and subsections are recognized. While most taxonomic revisions often focus on local floras, closely related and often resembling species are not always treated in full. Subgenus Macraea is here revised for the first time over its whole distribution, including an identification key and descriptions of its species with distributions, ecology, uses and vernacular names. The currently acknowledged varieties of Phyllanthus distichus are rejected due to inadequate morphological differences. Phyllanthus panayensis is synonymized with P. lancifolius. Phyllanthus alpestris has now become a variety of P. glaucophyllus because of the resemblance in morphology and distribution. The species complex around Phyllanthus virgatus remains taxonomically difficult, but Phyllanthus virgatus var. gardnerianus and Phyllanthus virgatus var. hirtellus are here recognized on the species level as P. gardnerianus, stat nov. and P. tararae, stat & nom. nov. A new species from the Philippines, Phyllanthus ridsdalei, is described
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Euphorbiaceae ; Macraea ; new species ; Phyllanthaceae ; Phyllanthus ; revision ; species descriptions ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
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  • 23
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 3, pp. 214-215
    Publication Date: 2024-06-22
    Description: Recent taxonomic innovations have led to the inclusion of most of the Brachiaria species in Urochloa and of all Pennisetum species in Cenchrus. Many of the necessary combinations have been made for the West African species, but still nine new combinations and seven lectotypifications are presented here
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Brachiaria ; Cenchrus ; Gramineae ; Pennisetum ; sub-Saharan grasses ; Urochloa
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  • 24
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 2, pp. 177-182
    Publication Date: 2024-06-22
    Description: Formal description of some new taxa from Indochina include in Lythraceae a new species of Lagerstroemia, L. poilanei W.J.de Wilde & Duyfjes with two varieties, var. poilanei and var. grandis W.J.de Wilde & Duyfjes, two new species of Rotala, R. saxatilis W.J.de Wilde & Duyfjes and R. protracta W.J.de Wilde & Duyfjes and a new variety of Rotala indica, Rotala indica (Willd.) Koehne var. minima W.J.de Wilde & Duyfjes. In Stemonaceae a new species, Stemona hirtella W.J.de Wilde & Duyfjes, is described.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
    Repository Name: National Museum of Natural History, Netherlands
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  • 25
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 2, pp. 158-164
    Publication Date: 2024-06-22
    Description: The achlorophyllous mycotroph Afrothismia kupensis (Thismiaceae), formerly misidentified either as A. pachyantha or as A. gesnerioides, is described from Mt Kupe in South West Region, Cameroon and assessed as Critically Endangered using the IUCN (2012) categories and criteria. It is threatened by forest clearance due to small-holder agriculture. Mt Kupe, with four of the 16 described species of Afrothismia, three of which are site endemics, is now the most species-diverse location known globally for the genus. Observations of floral visitors over seven days resulted in the identification of the likely pollinator as being females of an unknown species of Phoridae (scuttle fly) probably of the genus Megaselia. This is the first record of pollination known in the Thismiaceae, and may represent a mutualism between plant and animal partners.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; achlorophyllous mycotroph ; conservation ; Glomales ; Megaselia ; mutualism ; Phoridae ; pollination ; Rhizophagus
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  • 26
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 3, pp. 253-271
    Publication Date: 2024-06-24
    Description: A taxonomic revision of Flemingia subg. Rhynchosioides based on morphology and molecular information (matK and ITS) is presented. The subgenus comprises six herbaceous taxa (F. gracilis, F. mukerjeeana, F. nilgheriensis, F. rollae, F. tuberosa and F. vestita). All species except F. vestita are endemic to India. Morphological evidence and molecular phylogeny revealed that the subgenus is monophyletic. Nevertheless, the systematic position of F. tuberosa remains unclear on account of its unique ecology and inflorescence. A new species, F. mukerjeeana, is described and four binomials, namely F. gracilis, F. nilgheriensis, F. tuberosa and F. vestita have been lectotypified. Furthermore, all species have been described, illustrated and their ecology discussed. A taxonomic key including the recently described species from Thailand, F. sirindhorniae, is also provided for easy identification
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Cajaninae ; endemism ; lateritic plateaus ; molecular phylogeny ; taxonomy ; tuber crops
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  • 27
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 2, pp. 190-193
    Publication Date: 2024-07-02
    Description: Anadendrum chlorospathum is described as a new species from Central Vietnam, unique in the genus by a glossy medium green spathe, flowers in which the perigone is shorter than the gynoecium, and having anthers longer at anthesis than the filaments.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Anadendrum chlorospathum ; Gia Lai ; Indochina ; new species ; Vietnam
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  • 28
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 2, pp. 140-157
    Publication Date: 2024-07-02
    Description: The genus Vanoverberghia currently includes three species namely V. sepulchrei and V. rubrobracteata from the Philippines and V. sasakiana from Taiwan. New material targeting the Alpinia eubractea clade of the tribe Alpinieae was used to test the monophyly of Vanoverberghia.Acombined analysis of the ITS and trnK/matK regions reveals that these three species form a strongly supported monophyletic clade with Alpinia diversifolia and Alpinia vanoverberghii. The morphological descriptions of all species were updated after examining recent collections and comparing with types and protologues. The original description of A. diversifolia did not include information on the flowers which are described here. The morphology of A. diversifolia and A. vanoverberghii is for most parts in accordance with the previous perception of the genus but a few characters are added and a recircumscription of Vanoverberghia is subsequently provided here. Vanoverberghia diversifolia is reinstated and A. vanoverberghii is combined in Vanoverberghia. Furthermore, collections from northern Luzon documents the presence of V. sasakiana and all species of Vanoverberghia thus occur in the Philippines. A key to the five species is provided including a comprehensive taxonomic revision and designation of three lectotypes.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Alpinia ; ITS ; Lanyu ; Luzon ; new species record ; trnK/matK
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  • 29
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 3, pp. 278-279
    Publication Date: 2024-07-03
    Description: The history of the conservation of Brachypterum against Solori is briefly reviewed. Five new combinations in Brachypterum are made.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Brachypterum ; conserving ; Fabaceae ; Flora Malesiana ; new combinations ; Solori
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  • 30
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 3, pp. 275-277
    Publication Date: 2024-07-03
    Description: Two new tree species of Callerya from Borneo, C. katinganensis and C. sarawakensis are described. The new species are closely related to C. vasta. The differences between the three species are discussed.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Borneo ; Callerya ; Fabaceae ; Leguminosae-Papilionoideae ; new species
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  • 31
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 2, pp. 186-189
    Publication Date: 2024-07-03
    Description: Generic delimitations among the Asian members of the Persea group, including the recently described genus Alseodaphnopsis, are discussed. These genera, with the exception of Alseodaphnopsis, are characterized by reproductive characters. A study of flowers of Alseodaphnopsis species found that Alseodaphnopsis species have unisexual flowers and that Alseodaphnopsis is better defined by its unisexual flowers than by vegetative characters. This is the first report of the presence of unisexual flowers in any member of the Persea group.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics ; Alseodaphne ; Alseodaphnopsis ; Lauraceae ; Persea group ; unisexual flowers
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  • 32
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 3, pp. v-ix
    Publication Date: 2024-07-03
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
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  • 33
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    Naturalis Biodiversity Center
    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 64 no. 2, pp. 165-176
    Publication Date: 2024-07-03
    Description: The Crepidorhopalon whytei (Linderniaceae) species complex is revised using morphological analyses. Based primarily on variations in indumentum, floral morphology, corolla colour and seed morphology, four species are formally recognised within this group in eastern Africa. Crepidorhopalon whytei s.str. is widespread in the highlands of eastern Africa, extending from South Sudan and Ethiopia in the north through to western Tanzania in the south. A new combination in Crepidorhopalon is made for Lindernia flava (= C. flavus), which is confined to the Manica Highlands of the Mozambique-Zimbabwe border. Two new species are described, C. namuliensis which is known only from Mt Namuli in northern Mozambique and C. kwaleensis which is known only from the coastal lowlands of southeast Kenya. A fifth, imperfectly known species is documented from the Nguru Mountains of Tanzania where it is so far known from a single collection. Three names are lectotypified. The habitat requirements and distribution are documented and the extinction risk is assessed for each species. Crepidorhopalon flavus is assessed as globally Vulnerable and C. kwaleensis as globally Endangered, while C. namuliensis and C. whytei are currently considered to be of Least Concern, although the latter is declining markedly in parts of its range. The botanical importance of the key sites for the newly recognised taxa is discussed.
    Keywords: Plant Science ; Ecology ; Evolution ; Behavior and Systematics
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  • 34
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-02-16
    Keywords: Ecology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 35
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-02-16
    Keywords: Neuroscience
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 36
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-02-16
    Keywords: Neuroscience
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 37
    Publication Date: 2018-02-16
    Description: Temporal lobe epilepsy (TLE) is characterized by debilitating, recurring seizures and an increased risk for cognitive deficits. Mossy cells (MCs) are key neurons in the hippocampal excitatory circuit, and the partial loss of MCs is a major hallmark of TLE. We investigated how MCs contribute to spontaneous ictal activity and to spatial contextual memory in a mouse model of TLE with hippocampal sclerosis, using a combination of optogenetic, electrophysiological, and behavioral approaches. In chronically epileptic mice, real-time optogenetic modulation of MCs during spontaneous hippocampal seizures controlled the progression of activity from an electrographic to convulsive seizure. Decreased MC activity is sufficient to impede encoding of spatial context, recapitulating observed cognitive deficits in chronically epileptic mice.
    Keywords: Neuroscience
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 38
    Publication Date: 2018-02-16
    Description: Ecologists have shown through hundreds of experiments that ecological communities with more species produce higher levels of essential ecosystem functions such as biomass production, nutrient cycling, and pollination, but whether this finding holds in nature (that is, in large-scale and unmanipulated systems) is controversial. This knowledge gap is troubling because ecosystem services have been widely adopted as a justification for global biodiversity conservation. Here we show that, to provide crop pollination in natural systems, the number of bee species must increase by at least one order of magnitude compared with that in field experiments. This increase is driven by species turnover and its interaction with functional dominance, mechanisms that emerge only at large scales. Our results show that maintaining ecosystem services in nature requires many species, including relatively rare ones.
    Keywords: Ecology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 39
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-07-27
    Keywords: Neuroscience
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 40
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-06-22
    Keywords: Ecology
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  • 41
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-06-22
    Keywords: Neuroscience
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  • 42
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-06-29
    Keywords: Neuroscience
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  • 43
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-08-03
    Keywords: Neuroscience
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  • 44
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-09-14
    Description: Billions of animals cross the globe each year during seasonal migrations, but efforts to monitor them are hampered by the unpredictability of their movements. We developed a bird migration forecast system at a continental scale by leveraging 23 years of spring observations to identify associations between atmospheric conditions and bird migration intensity. Our models explained up to 81% of variation in migration intensity across the United States at altitudes of 0 to 3000 meters, and performance remained high in forecasting events 1 to 7 days in advance (62 to 76% of variation was explained). Avian migratory movements across the United States likely exceed 500 million individuals per night during peak passage. Bird migration forecasts will reduce collisions with buildings, airplanes, and wind turbines; inform a variety of monitoring efforts; and engage the public.
    Keywords: Ecology
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  • 45
    Publication Date: 2018-09-14
    Description: Nie and colleagues suggest a key role for interannual climate variation as an explanation for the temporal dynamics of an unexpected 20-year reversal of biomass responses of C 3 -C 4 grasses to elevated CO 2 . However, we had already identified some climate-dependent differences in C 3 and C 4 responses to eCO 2 and shown that these could not fully explain the temporal dynamics we observed.
    Keywords: Ecology
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  • 46
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-09-21
    Keywords: Neuroscience
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  • 47
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-09-28
    Keywords: Ecology
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  • 48
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-10-05
    Keywords: Ecology
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  • 49
    Publication Date: 2018-10-05
    Description: Biodiversity experiments have shown that species loss reduces ecosystem functioning in grassland. To test whether this result can be extrapolated to forests, the main contributors to terrestrial primary productivity, requires large-scale experiments. We manipulated tree species richness by planting more than 150,000 trees in plots with 1 to 16 species. Simulating multiple extinction scenarios, we found that richness strongly increased stand-level productivity. After 8 years, 16-species mixtures had accumulated over twice the amount of carbon found in average monocultures and similar amounts as those of two commercial monocultures. Species richness effects were strongly associated with functional and phylogenetic diversity. A shrub addition treatment reduced tree productivity, but this reduction was smaller at high shrub species richness. Our results encourage multispecies afforestation strategies to restore biodiversity and mitigate climate change.
    Keywords: Ecology
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  • 50
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-10-12
    Keywords: Neuroscience
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  • 51
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-10-12
    Keywords: Neuroscience
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  • 52
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-10-12
    Description: Glia constitute roughly half of the cells of the central nervous system (CNS) but were long-considered to be static bystanders to its formation and function. Here we provide an overview of how the diverse and dynamic functions of glial cells orchestrate essentially all aspects of nervous system formation and function. Radial glia, astrocytes, oligodendrocyte progenitor cells, oligodendrocytes, and microglia each influence nervous system development, from neuronal birth, migration, axon specification, and growth through circuit assembly and synaptogenesis. As neural circuits mature, distinct glia fulfill key roles in synaptic communication, plasticity, homeostasis, and network-level activity through dynamic monitoring and alteration of CNS structure and function. Continued elucidation of glial cell biology, and the dynamic interactions of neurons and glia, will enrich our understanding of nervous system formation, health, and function.
    Keywords: Neuroscience
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  • 53
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-10-12
    Description: To understand how neurons assemble to form functional circuits, it is necessary to obtain a detailed knowledge of their diversity and to define the developmental specification programs that give rise to this diversity. Invertebrates and vertebrates appear to share common developmental principles of neuronal specification in which cascades of transcription factors temporally pattern progenitors, while spatial cues modify the outcomes of this temporal patterning. Here, we highlight these conserved mechanisms and describe how they are used in distinct neural structures. We present the questions that remain for a better understanding of neuronal specification. Single-cell RNA profiling approaches will potentially shed light on these questions, allowing not only the characterization of neuronal diversity in adult brains, but also the investigation of the developmental trajectories leading to the generation and maintenance of this diversity.
    Keywords: Neuroscience
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  • 54
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-12-21
    Keywords: Ecology
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  • 55
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-12-21
    Keywords: Neuroscience
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  • 56
    Publication Date: 2018-10-19
    Keywords: Ecology
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  • 57
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-10-19
    Keywords: Ecology
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  • 58
    Publication Date: 2018-10-26
    Description: Clinical observations indicate that the paramedian region of the thalamus is a critical node for controlling wakefulness. However, the specific nucleus and neural circuitry for this function remain unknown. Using in vivo fiber photometry or multichannel electrophysiological recordings in mice, we found that glutamatergic neurons of the paraventricular thalamus (PVT) exhibited high activities during wakefulness. Suppression of PVT neuronal activity caused a reduction in wakefulness, whereas activation of PVT neurons induced a transition from sleep to wakefulness and an acceleration of emergence from general anesthesia. Moreover, our findings indicate that the PVT–nucleus accumbens projections and hypocretin neurons in the lateral hypothalamus to PVT glutamatergic neurons’ projections are the effector pathways for wakefulness control. These results demonstrate that the PVT is a key wakefulness-controlling nucleus in the thalamus.
    Keywords: Neuroscience
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  • 59
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-11-23
    Keywords: Ecology
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  • 60
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-11-23
    Keywords: Ecology
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  • 61
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-12-07
    Keywords: Ecology
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  • 62
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-10-26
    Keywords: Neuroscience
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  • 63
    Publication Date: 2018-10-26
    Description: The salience of behaviorally relevant stimuli is dynamic and influenced by internal state and external environment. Monitoring such changes is critical for effective learning and flexible behavior, but the neuronal substrate for tracking the dynamics of stimulus salience is obscure. We found that neurons in the paraventricular thalamus (PVT) are robustly activated by a variety of behaviorally relevant events, including novel ("unfamiliar") stimuli, reinforcing stimuli and their predicting cues, as well as omission of the expected reward. PVT responses are scaled with stimulus intensity and modulated by changes in homeostatic state or behavioral context. Inhibition of the PVT responses suppresses appetitive or aversive associative learning and reward extinction. Our findings demonstrate that the PVT gates associative learning by providing a dynamic representation of stimulus salience.
    Keywords: Neuroscience
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  • 64
    Publication Date: 2018-11-02
    Description: Animals constantly update their body posture to meet behavioral demands, but little is known about the neural signals on which this depends. We therefore tracked freely foraging rats in three dimensions while recording from the posterior parietal cortex (PPC) and the frontal motor cortex (M2), areas critical for movement planning and navigation. Both regions showed strong tuning to posture of the head, neck, and back, but signals for movement were much less dominant. Head and back representations were organized topographically across the PPC and M2, and more neurons represented postures that occurred less often. Simultaneous recordings across areas were sufficiently robust to decode ongoing behavior and showed that spiking in the PPC tended to precede that in M2. Both the PPC and M2 strongly represent posture by using a spatially organized, energetically efficient population code.
    Keywords: Neuroscience
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  • 65
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-11-16
    Keywords: Neuroscience
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  • 66
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-11-16
    Keywords: Neuroscience
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  • 67
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-11-30
    Keywords: Neuroscience
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  • 68
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-12-14
    Keywords: Ecology
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  • 69
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-08-10
    Keywords: Ecology
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  • 70
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-09-07
    Keywords: Ecology
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  • 71
    Publication Date: 2018-04-27
    Description: Memory resides in engram cells distributed across the brain. However, the site-specific substrate within these engram cells remains theoretical, even though it is generally accepted that synaptic plasticity encodes memories. We developed the dual-eGRASP (green fluorescent protein reconstitution across synaptic partners) technique to examine synapses between engram cells to identify the specific neuronal site for memory storage. We found an increased number and size of spines on CA1 engram cells receiving input from CA3 engram cells. In contextual fear conditioning, this enhanced connectivity between engram cells encoded memory strength. CA3 engram to CA1 engram projections strongly occluded long-term potentiation. These results indicate that enhanced structural and functional connectivity between engram cells across two directly connected brain regions forms the synaptic correlate for memory formation.
    Keywords: Neuroscience
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  • 72
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-05-18
    Keywords: Ecology
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  • 73
    Publication Date: 2018-05-18
    Description: In an era of massive biodiversity loss, the greatest conservation success story has been the growth of protected land globally. Protected areas are the primary defense against biodiversity loss, but extensive human activity within their boundaries can undermine this. Using the most comprehensive global map of human pressure, we show that 6 million square kilometers (32.8%) of protected land is under intense human pressure. For protected areas designated before the Convention on Biological Diversity was ratified in 1992, 55% have since experienced human pressure increases. These increases were lowest in large, strict protected areas, showing that they are potentially effective, at least in some nations. Transparent reporting on human pressure within protected areas is now critical, as are global targets aimed at efforts required to halt biodiversity loss.
    Keywords: Ecology
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  • 74
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-05-25
    Description: LaManna et al . (Reports, 30 June 2017, p. 1389) found higher conspecific negative density dependence in tree communities at lower latitudes, yielding a possible mechanistic explanation for the latitudinal diversity gradient. We show that their results are artifacts of a selective data transformation and a forced zero intercept in their fitted model. A corrected analysis shows no latitudinal trend.
    Keywords: Ecology
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  • 75
    Publication Date: 2018-05-25
    Description: Chisholm and Fung claim that our method of estimating conspecific negative density dependence (CNDD) in recruitment is systematically biased, and present an alternative method that shows no latitudinal pattern in CNDD. We demonstrate that their approach produces strongly biased estimates of CNDD, explaining why they do not detect a latitudinal pattern. We also address their methodological concerns using an alternative distance-weighted approach, which supports our original findings of a latitudinal gradient in CNDD and a latitudinal shift in the relationship between CNDD and species abundance.
    Keywords: Ecology
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  • 76
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-11-02
    Keywords: Neuroscience
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  • 77
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-11-09
    Keywords: Ecology
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  • 78
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-11-09
    Keywords: Neuroscience
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  • 79
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-11-09
    Keywords: Neuroscience
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  • 80
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-11-09
    Description: Consolidation of spatial and episodic memories is thought to rely on replay of neuronal activity sequences during sleep. However, the network dynamics underlying the initial storage of memories during wakefulness have never been tested. Although slow, behavioral time scale sequences have been claimed to sustain sequential memory formation, fast ("theta") time scale sequences, nested within slow sequences, could be instrumental. We found that in rats traveling passively on a model train, place cells formed behavioral time scale sequences but theta sequences were degraded, resulting in impaired subsequent sleep replay. In contrast, when the rats actively ran on a treadmill while being transported on the train, place cells generated clear theta sequences and accurate trajectory replay during sleep. Our results support the view that nested sequences underlie the initial formation of memory traces subsequently consolidated during sleep.
    Keywords: Neuroscience
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  • 81
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-07-13
    Description: Sabo et al . (Research Articles, 8 December 2017, p. 1270) use sophisticated analyses of flow and fishery data from the Lower Mekong Basin to design a "good" hydrograph that, if implemented by planned hydropower dams, would increase the catch by a factor of 3.7. However, the hydrograph is not implementable, and, if it were, it would devastate the fishery. Further, the analyses are questionable.
    Keywords: Ecology
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  • 82
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-07-13
    Keywords: Neuroscience
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  • 83
    Publication Date: 2018-06-15
    Description: Whether fear attenuation is mediated by inhibition of the original memory trace of fear with a new memory trace of safety or by updating of the original fear trace toward safety has been a long-standing question in neuroscience and psychology alike. In particular, which of the two scenarios underlies the attenuation of remote (month-old) fear memories is completely unknown, despite the impetus to better understand this process against the backdrop of enduring traumata. We found—chemogenetically and in an engram-specific manner—that effective remote fear attenuation is accompanied by the reactivation of memory recall–induced neurons in the dentate gyrus and that the continued activity of these neurons is critical for fear reduction. This suggests that the original memory trace of fear actively contributes to remote fear attenuation.
    Keywords: Neuroscience
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  • 84
    Publication Date: 2018-06-22
    Keywords: Ecology
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  • 85
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-06-29
    Keywords: Neuroscience
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  • 86
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-08-03
    Keywords: Neuroscience
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  • 87
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-08-03
    Keywords: Ecology
    Print ISSN: 0036-8075
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    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 88
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-08-03
    Keywords: Neuroscience
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 89
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-04-20
    Keywords: Ecology
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    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 90
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-04-20
    Keywords: Neuroscience
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 91
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-05-11
    Keywords: Neuroscience
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    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 92
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-05-25
    Keywords: Ecology
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    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 93
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-03-30
    Keywords: Neuroscience
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    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 94
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-03-30
    Keywords: Neuroscience
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 95
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-04-27
    Keywords: Neuroscience
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    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 96
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-05-04
    Keywords: Neuroscience
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  • 97
    Publication Date: 2018-05-04
    Description: Why are some visual stimuli consciously detected, whereas others remain subliminal? We investigated the fate of weak visual stimuli in the visual and frontal cortex of awake monkeys trained to report stimulus presence. Reported stimuli were associated with strong sustained activity in the frontal cortex, and frontal activity was weaker and quickly decayed for unreported stimuli. Information about weak stimuli could be lost at successive stages en route from the visual to the frontal cortex, and these propagation failures were confirmed through microstimulation of area V1. Fluctuations in response bias and sensitivity during perception of identical stimuli were traced back to prestimulus brain-state markers. A model in which stimuli become consciously reportable when they elicit a nonlinear ignition process in higher cortical areas explained our results.
    Keywords: Neuroscience
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  • 98
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-05-04
    Keywords: Neuroscience
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    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 99
    Publication Date: 2018-05-25
    Description: Hülsmann and Hartig suggest that ecological mechanisms other than specialized natural enemies or intraspecific competition contribute to our estimates of conspecific negative density dependence (CNDD). To address their concern, we show that our results are not the result of a methodological artifact and present a null-model analysis that demonstrates that our original findings—(i) stronger CNDD at tropical relative to temperate latitudes and (ii) a latitudinal shift in the relationship between CNDD and species abundance—persist even after controlling for other processes that might influence spatial relationships between adults and recruits.
    Keywords: Ecology
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  • 100
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    American Association for the Advancement of Science (AAAS)
    In: Science
    Publication Date: 2018-06-01
    Keywords: Ecology
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Geosciences , Computer Science , Medicine , Natural Sciences in General , Physics
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