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  • Ocean  (5)
  • Global warming  (4)
  • Chemistry  (3)
  • Inorganic Chemistry
  • Massachusetts Institute of Technology and Woods Hole Oceanographic Institution  (12)
  • 2015-2019  (12)
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  • 1
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Applied Ocean Science & Engineering at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution February 2019.
    Description: Under global climate change, our oceans are warming at an unprecedented rate. Increased temperatures represent a severe source of stress for many marine organisms. This thesis aims to understand how corals and anemones respond to changing temperatures across different timescales and investigates mechanisms that can facilitate persistence in light of environmental change, from selection and adaptation across generations to phenotypic plasticity within a single individual’s lifespan. In this context, I explore three case studies of thermal stress in corals and anemones. I begin with massive Porites lobata corals from the central Pacific. Here, reefs that are most affected by El Niño, such as Jarvis and the northeast Phoenix Islands maintain genetic diversity indicating recruitment from nearby reefs may occur. Yet, they show significant genetic differentiation (FST) from farther areas, suggesting this dispersal may be limited. Thermal variability in this region may also favor plasticity over adaptation, as we do not find differences in bleaching histories among genetic groups. Next, I investigate genetic connectivity and adaptation to chronically elevated temperatures across a natural temperature gradient within the Palauan archipelago. Combining genetic data and historical growth measurements from coral cores, I find that Palau’s warmest reefs harbor unique genetic subpopulations of Porites lobata and find evidence for a genetic basis of their higher thermal tolerance. Lastly, I explore if parents can modulate parental effects to increase the thermal tolerance of their offspring over short time scales, using the estuarine anemone Nematostella vectensis. Indeed, I find parents exposed to increased temperatures quickly produce more thermally tolerant larvae. In fact, offspring from these Massachusetts parents show thermal thresholds that are indistinguishable from more southern populations. This thesis highlights the ability and potential of corals and anemones to persist under variable conditions over different timescales. Nevertheless, a compelling effort to reduce rates of warming worldwide will be imperative to the survival and integrity of key marine ecosystems such as coral reefs.
    Description: Funding for this research came from the National Science Foundation (Awards OCE-1537338, OCE-1605365, OCE-1220529, and OCE-1031971), the Link Foundation, Bermuda Institute of Ocean Sciences Grants-in-Aid, the Tiffany & Co. Foundation, the Nature Conservancy, the Dalio Foundation, Inc., through the Dalio Explore Fund, and Ray Dalio through the WHOI Access to the Sea Fund, all to Anne Cohen; and a Gordon and Betty Moore Foundation grant (#4033) to Ann Tarrant. Funding to H. Rivera was provided by the Charles M. Vest Presidential Fellowship, the National Defense Science and Engineering Graduate Fellowship, American Association for University Women’s American Dissertation Fellowship, MIT’s Martin Family Foundation Fellowship, the Gates Millennium Scholars Program, WHOI’s Coastal Ocean Institute Grants, WHOI’s Grassler Family Foundation Grants, WHOI’s Ocean Ventures Fund, the MIT-BIOS Fund, and the MIT-WHOI Academic Programs Office.
    Keywords: Global warming ; Corals ; Anemones ; Marine organisms ; Thermal stresses ; Marine ecology
    Repository Name: Woods Hole Open Access Server
    Type: Thesis
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  • 2
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Submitted in partial fulfillment of the requirements for the degree of Master of Science in Electrical Engineering and Computer Science at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution February 2019.
    Description: The Arctic surface air temperature has warmed nearly twice as much as the global mean since the mid-20th century. Arctic sea ice has also been declining rapidly in recent decades. There is still discussion about how much of this Arctic amplification is caused by local factors, such as changes in surface albedo, versus remote factors, such as changes in heat transport from the midlatitudes. This thesis focuses mainly on the role of poleward heat transport on Arctic amplification. Most of the previous studies on this topic have defined ocean heat transport as the zonally averaged ocean heat transport at 65∘N or 70∘N, which ignores the physical pathways of heat into the Arctic and may include recirculation of heat in the North Atlantic. In this thesis, we define the ocean heat transport as the heat transport across five sections surrounding the Arctic, to create a closed domain in the Arctic. Previous studies on Arctic amplification have used either a single model run or have compared results from a multi-model ensemble. While the multi-model ensemble approach may potentially average out biases in individual models, the ensemble spread confounds the model differences and the internal climate variability. In this thesis, we investigate the Arctic amplification in the Community Earth System Model version 1 (CESM1) Large Ensemble. The CESM1 Large Ensemble includes 40 members that use the same model and external forcing, but different initializations. This simulates different climate trajectories that can occur in a given atmosphere-ocean-land-cryosphere system. We find that CESM1 Large Ensemble projects a large increase towards the end of the 21st century in ocean heat transport into the Arctic, and that the increase in ocean heat transport is significantly correlated with Arctic amplification. The main contributor to the increase in ocean heat transport is the increase across the Barents Sea Opening. The increase in Barents Sea Opening ocean heat transport is highly correlated with the decrease in sea ice in the Barents-Kara Sea region. We propose that this is because the increase in ocean heat transport melts the ice at the sea ice margin, which results in increased surface heat flux from the ocean and further local feedback through decreased surface albedo and increased cloud coverage. We also find that while the changes in atmosphere heat transport into the Arctic circle at 66.5∘N are on the same order as the changes in ocean heat transport, they are not correlated with Arctic amplification.
    Keywords: Global warming ; Temperature ; Sea ice ; Heat--Transmission ; Barents Sea ; Arctic regions
    Repository Name: Woods Hole Open Access Server
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  • 3
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-26
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution September 2019.
    Description: The Earth's oceans holds a wealth of information currently hidden from us. Effective measurement of its properties could provide a better understanding of our changing climate and insights into the creatures that inhabit its waters. Autonomous underwater vehicles (AUVs) hold the promise of penetrating the ocean environment and uncovering its mysteries; and progress in underwater robotics research over the past three decades has resulted in vehicles that can navigate reliably and operate consistently, providing oceanographers with an additional tool for studying the ocean. Unfortunately, the high cost of these vehicles has stifled the democratization of this technology. We believe that this is a consequence of two factors. Firstly, reliable navigation on conventional AUVs has been achieved through the use of a sophisticated sensor system, namely the Doppler velocity log (DVL)-aided inertial navigation system (INS), which drives up vehicle cost, power use and size. Secondly, deployment of these vehicles is expensive and unwieldy due to their complexity, size and cost, resulting in the need for specialized personnel for vehicle operation and maintenance. The recent development of simpler, low-cost, miniature underwater robots provides a solution that mitigates both these factors; however, removing the expensive DVL-aided INS means that they perform poorly in terms of navigation accuracy. We address this by introducing a novel acoustic system that enables AUV self-localization without requiring a DVL-aided INS or on-board active acoustic transmitters. We term this approach Passive Inverted Ultra-Short Baseline (piUSBL) positioning. The system uses a single acoustic beacon and a time-synchronized, vehicle-mounted, passive receiver array to localize the vehicle relative to this beacon. Our approach has two unique advantages: first, a single beacon lowers cost and enables easy deployment; second, a passive receiver allows the vehicle to be low-power, low-cost and small, and enables multi-vehicle scalability. Providing this new generation of small and inexpensive vehicles with accurate navigation can potentially lower the cost of entry into underwater robotics research and further its widespread use for ocean science. We hope that these contributions in low-cost underwater navigation will enable the ubiquitous and coordinated use of robots to explore and understand the underwater domain.
    Description: This research was funded and supported by a number of sponsors; we gratefully acknowledge them below. Defense Advanced Research Projects Agency (DARPA) and SSC Pacific via Applied Physical Sciences Corp. (APS) under contract number N66001-11-C-4115. SSC Pacific via Applied Physical Sciences Corp. (APS) under award number N66001-14-C-4031. Air Force via Lincoln Laboratory under award number FA8721-05-C-0002. Office of Naval Research (ONR) via University of California-San Diego under award number N00014-13-1-0632. Defense Advanced Research Projects Agency (DARPA) via Applied Physical Sciences Corp. (APS) under award number HR0011-18-C-0008. Office of Naval Research (ONR) under award number N00014-17-1-2474.
    Keywords: Ocean ; Submersibles ; Robotics ; Sound ; Navigation
    Repository Name: Woods Hole Open Access Server
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  • 4
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-26
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Physical Oceanography at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution June 2019.
    Description: Global patterns of ocean salinity arise from the exchange of freshwater between the sea surface and the atmosphere. For a quasi-steady state system, these surface fluxes are balanced by compensating transports of salt in the ocean interior. In a warming climate, the atmosphere holds additional water vapor which acts to intensify the global water cycle. Amplified freshwater fluxes are then absorbed at the surface and propagate along ocean circulation pathways. Here, we use coupled model results from the CMIP5 experiment to identify coherent responses in the atmospheric water cycle and in ocean salinity patterns. Some aspects of the response are consistent across models, while other regions show large inter-model spread. In particular, the salinity response in the North Atlantic subpolar gyre, where the mean salinity plays a role in maintaining high surface density for deep-water formation, has low confidence in CMIP5 models. To understand how differences in ocean circulation may affect this response, we use two techniques to diagnose the role of salt transports in the present-day climate. The first is a salt budget within the surface mixed layer, which identifies major transport processes. The second is a Lagrangian particle tracking tool, used to understand the regional connectivity of water masses. From this analysis, we find that anomalous freshwater signals become well mixed within the ocean gyres, but can be isolated on larger scales. The subpolar Atlantic salinity response generally shows freshening at the surface, but is sensitive to the transport of anomalously salty water from the subtropics, a largely eddy-driven process. As CMIP5 models use a range of eddy parameterizations, this is likely a source of uncertainty in the salinity response. Finally, we investigate the effect of salinity changes on the deep overturning cells and other circulations, and find a complex influence that also depends on the details of advective pathways. In a warming scenario, water cycle amplification actually works to strengthen the Atlantic meridional overturning circulation due to the influence of enhanced subtropical evaporation.
    Description: Funding for this thesis was provided by NASA grant NNX12AF59GS03, a NASA Earth and Space Science Fellowship award 80NSSC17K0372, and the WHOI Academic Programs Office.
    Keywords: Salinity ; Climatic changes ; Ocean ; Dissertations, Academic ; North Atlantic Ocean
    Repository Name: Woods Hole Open Access Server
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  • 5
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution September 2018
    Description: Many chemical constituents are removed from the ocean by attachment to settling particles, a process referred to as “scavenging.” Radioisotopes of thorium, a highly particle-reactive element, have been used extensively to study scavenging in the ocean. However, this process is complicated by the highly variable chemical composition and concentration of particles in oceanic waters. This thesis focuses on understanding the cycling of thorium as affected by particle concentration and particle composition in the North Atlantic. This objective is addressed using (i) the distributions 228,230,234Th, their radioactive parents, particle composition, and bulk particle concentration, as measured or estimated along the GEOTRACES North Atlantic Transect (GA03) and (ii) a model for the reversible exchange of thorium with particles. Model parameters are either estimated by inversion (chapter 2-4), or prescribed in order to simulate 230Th in a circulation model (chapter 5). The major findings of this thesis follow. In chapters 2 and 3, I find that the rate parameters of the reversible exchange model show systematic variations along GA03. In particular, 𝑘1, the apparent first-order rate "constant" of Th adsorption onto particles, generally presents maxima in the mesopelagic zone and minima below. A positive correlation between 𝑘1 and bulk particle concentration is found, consistent with the notion that the specific rate at which a metal in solution attaches to particles increases with the number of surface sites available for adsorption. In chapter 4, I show that Mn (oxyhydr)oxides and biogenic particles most strongly influence 𝑘1 west of the Mauritanian upwelling, but that biogenic particles dominate 𝑘1 in this region. In chapter 5, I find that dissolved 230Th data are best represented by a model that assumes enhanced values of 𝑘1 near the seafloor. Collectively, my findings suggest that spatial variations in Th radioisotope activities observed in the North Atlantic reflect at least partly variations in the rate at which Th is removed from the water column.
    Description: This work was supported by the US National Science Foundation. Two US NSF grants have supported the research in this thesis (OCE-1232578 and OCE-155644).
    Keywords: Thorium ; Chemistry
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  • 6
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-26
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution February 2018.
    Description: The biological carbon pump (BCP) helps to moderate atmospheric carbon dioxide levels by bringing carbon to the deep ocean, where it can be sequestered on timescales of centuries to millennia. Climate change is predicted to decrease the efficiency of the global BCP, however, the magnitude and timescale of this shift is largely uncertain and will likely impact some areas of the global ocean more significantly than others. Therefore, it is imperative that we (1) accurately quantify surface export and remineralization of particulate organic carbon (POC) via the BCP over large regions of the global ocean, (2) examine the factors controlling these POC fluxes and their variability, which includes the cycling of biologically-relevant trace metals, and (3) establish if and how the BCP is changing over time. This thesis focuses on addressing various aspects of these objectives using the 234Th-238U method across basin-scale GEOTRACES transects. First, the export and remineralization of POC were examined across large gradients in productivity, upwelling, community structure, and dissolved oxygen in the southeastern tropical Pacific Ocean. Although low oxygen zones are traditionally thought to have decreased POC flux attenuation relative to other regions of the global ocean and the low oxygen Pacific locations followed this pattern, regions that were functionally anoxic had enhanced attenuation in the upper 400 m. Second, trace metal export and remineralization were quantified across the Pacific transect. Because many trace metals are necessary for the metabolic functions of marine organisms and can co-limit marine productivity, the controls on the cycling of trace metals in the upper ocean were examined. Lastly, POC export was determined across two transects in the Western Arctic Ocean, where light and nutrient availability drive the biological pump. Upper ocean export estimates in the central basin did not reflect a substantial change in the biological pump compared to studies from the last three decades, however, an extensive maximum in 234Th relative to 238U deeper in the water column indicated that rapid vertical transport had occurred, which could suggest a more efficient biological pump in the Arctic Ocean.
    Description: I was funded under the NASA Earth and Space Science Fellowship Program grant (NNX13AP31H) for three years. I was also funded for work on the U.S. Pacific and Arctic GEOTRACES campaigns under two National Science Foundation grants (OCE-1232669 and OCE- 1458305). The MIT Henry G. Houghton Fund provided support for the purchase of computers and textbooks and the MIT Scurlock Fund allowed for my travel to Bermuda for cruise training. WHOI Academic Programs supplemented the aforementioned funding and also provided additional support for travel to conferences.
    Keywords: Carbon ; Climatic changes ; Ocean ; Thomas G. Thompson (Ship) Cruise TN303
    Repository Name: Woods Hole Open Access Server
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  • 7
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-26
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution February 2018
    Description: In the ocean, chromium (Cr) is a redox-sensitive trace metal. The reduction of Cr(VI) to Cr(III) occurs in oxygen deficient zones (ODZs), and Cr reduction in general has been identified as a significant Cr isotope fractionation mechanism. This thesis presents the first Cr isotope variations (d53Cr) in ODZs of the ocean and adds to the sparse Cr isotope data published for modern seawater. I developed a precise and accurate Cr isotope method for seawater samples. Seawater acidification converts total Cr to Cr(III) which is preconcentrated by Mg(OH)2 coprecipitation. A three-column anion exchange chromatography scheme separates Cr from isobaric and polyatomic interferences present in the seawater and reagent matrixes. Isotope analysis is performed on a MC-ICP-MS IsoProbe. The addition of a 50Cr-54Cr double spike allows for accurate correction of procedural and instrumental Cr mass fractionations. The first Cr isotope ratio data for a full water column profile in the Pacific Ocean is presented. This station serves as a fully oxic counterpart to stations located within the ODZ of the Eastern Tropical North Pacific. At one station, Cr concentrations are lower and d53Cr values are heavier within the ODZ. This is consistent with Cr reduction resulting in isotopically lighter, particlereactive Cr(III), which is scavenged and exported from the water column. A strong correlation of d53Cr and d15NNO3- at this station suggests that Cr reduction may be microbially mediated instead of simply being a product of thermodynamic equilibrium. Alternatively, Cr may be reduced by Fe(II). In the anoxic bottom waters of the Santa Barbara Basin a strong Cr reduction signal (lower [Cr], heavier d53Cr) is observed, which may result from the same aforementioned Cr reduction mechanisms. A shift to the heaviest seawater Cr isotope signatures yet observed was detected in the oxic bottom waters of the shallow Arctic Chukchi shelf, while Cr concentrations decreased. This extreme isotope signal may result from Cr reduction by a reduced species (e.g. Fe(II)), which was released from the underlying anoxic shelf sediments. Cr in the Atlantic layer and in the bottom water of a central Arctic station appears to be shaped by a novel, unidentified process.
    Description: This research was supported by the US National Science Foundation (NSF Award No. OCE- 0926197, OCE-1233749, OCE-1357224), the Singapore National Research Foundation through the Singapore-MIT Alliance for Research and Technology (Award No. WBS 6916070), and the Center for Microbial Research and Education (NSF-OIA Award No. EF-0424599). In the last year of my studies, I was supported by a MIT-WHOI Joint Program Science Fellowship.
    Keywords: Ocean ; Chromium ; Seawater ; Isotopes
    Repository Name: Woods Hole Open Access Server
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  • 8
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution June 2017
    Description: This thesis documents the origin, distribution, and fate of methane and several of its isotopic forms on Earth. Using observational, experimental, and theoretical approaches, I illustrate how the relative abundances of 12CH4, 13CH4, 12CH3D, and 13CH3D record the formation, transport, and breakdown of methane in selected settings. Chapter 2 reports precise determinations of 13CH3D, a “clumped” isotopologue of methane, in samples collected from various settings representing many of the major sources and reservoirs of methane on Earth. The results show that the information encoded by the abundance of 13CH3D enables differentiation of methane generated by microbial, thermogenic, and abiogenic processes. A strong correlation between clumped- and hydrogen-isotope signatures in microbial methane is identified and quantitatively linked to the availability of H2 and the reversibility of microbially-mediated methanogenesis in the environment. Determination of 13CH3D in combination with hydrogen-isotope ratios of methane and water provides a sensitive indicator of the extent of C–H bond equilibration, enables fingerprinting of methane-generating mechanisms, and in some cases, supplies direct constraints for locating the waters from which migrated gases were sourced. Chapter 3 applies this concept to constrain the origin of methane in hydrothermal fluids from sediment-poor vent fields hosted in mafic and ultramafic rocks on slow- and ultraslow-spreading mid-ocean ridges. The data support a hypogene model whereby methane forms abiotically within plutonic rocks of the oceanic crust at temperatures above ca. 300 C during respeciation of magmatic volatiles, and is subsequently extracted during active, convective hydrothermal circulation. Chapter 4 presents the results of culture experiments in which methane is oxidized in the presence of O2 by the bacterium Methylococcus capsulatus strain Bath. The results show that the clumped isotopologue abundances of partially-oxidized methane can be predicted from knowledge of 13C/12C and D/H isotope fractionation factors alone.
    Description: The research activities documented in this thesis were made possible by grants to my advisor from the U.S. National Science Foundation (NSF award EAR-1250394), the National Aeronautics and Space Administration (NASA) Astrobiology Institute (NAI, University of Colorado, Boulder, CAN 7 under Cooperative Agreement NNA15BB02A), the Department of Energy (DOE, Small Business Innovation Research program, contract DE-SC0004575), the Alfred P. Sloan Foundation via the Deep Carbon Observatory, and a Shell Graduate Fellowship through the MIT Energy Initiative. I completed the bulk of the work in this thesis while being supported by a National Defense Science and Engineering Graduate (NDSEG) Fellowship awarded through the Office of Naval Research of the U.S. Department of Defense. The StanleyW.Watson Fellowship Fund provided support during my first summer term at WHOI.The Charles M. Vest Presidential Fellowship at MIT supported me in the first year of my Ph.D. studies. I received additional support that year through NSF award EAR-1159318 (to S. Ono and T. Bosak) and theWalter & Adel Hohenstein Graduate Fellowship of Phi Kappa Phi. The MIT Earth Resources Laboratory and PAOC Houghton Fund funded my attendance at several conferences.
    Keywords: Methane ; Chemistry ; Isotopes ; Oxidation
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  • 9
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution June 2017
    Description: This thesis investigates the formation and subsequent motion of oceanic lithospheric plates through geophysical and petrological methods. Ocean crust and lithosphere forms at mid-ocean ridges as the underlying asthenosphere rises, melts, and flows away from the ridge axis. In Chapters 2 and 3, I present the results from partial melting experiments of mantle peridotite that were conducted in order to examine the mantle melting point, or solidus, beneath a mid-ocean ridge. Chapter 2 determines the peridotite solidus at a single pressure of 1.5 GPa and concludes that the oceanic mantle potential temperature must be ~60ºC hotter than current estimates. Chapter 3 goes further to provide a more accurate parameterization of the anhydrous mantle solidus from experiments over a range of pressures. This chapter concludes that the range of potential temperatures of the mantle beneath mid-ocean ridges and plumes is smaller than currently estimated. Once formed, the oceanic plate moves atop the underlying asthenosphere away from the ridge axis. Chapter 4 uses seafloor magnetotelluric data to investigate the mechanism responsible for plate motion at the lithosphere-asthenosphere boundary. The resulting two dimensional conductivity model shows a simple layered structure. By applying petrological constraints, I conclude that the upper asthenosphere does not contain substantial melt, which suggests that either a thermal or hydration mechanism supports plate motion. Oceanic plate motion has dramatically changed the surface of the Earth over time, and evidence for ancient plate motion is obvious from detailed studies of the longer lived continental lithosphere. In Chapter 5, I investigate past plate motion by inverting magnetotelluric data collected over eastern Zambia. The conductivity model probes the Zambian lithosphere and reveals an ancient subduction zone previously suspected from surface studies. This chapter elucidates the complex lithospheric structure of eastern Zambia and the geometry of the tectonic elements in the region, which collided as a result of past oceanic plate motion. Combined, the chapters of this thesis provide critical constraints on ocean plate dynamics.
    Description: Funding for this research was provided by the National Science Foundation Division of Earth Sciences (EAR) grant number 1010432, Division of Ocean Sciences (OCE) grant numbers 1459649 and 0928663, WHOI Deep Ocean Exploration Institute, and the WHOI Academic Programs Office.
    Keywords: Lithosphere ; Ocean ; Temperature ; Mid-Atlantic Ridge
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  • 10
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-26
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution February 2017
    Description: Salt marshes are physically, chemically, and biologically dynamic environments found globally at temperate latitudes. Tidal creeks and marshtop ponds may expand at the expense of productive grass-covered marsh platform. It is therefore important to understand the present magnitude and drivers of production and respiration in these submerged environments in order to evaluate the future role of salt marshes as a carbon sink. This thesis describes new methods to apply the triple oxygen isotope tracer of photosynthetic production in a salt marsh. Additionally, noble gases are applied to constrain air-water exchange processes which affect metabolism tracers. These stable, natural abundance tracers complement traditional techniques for measuring metabolism. In particular, they highlight the potential importance of daytime oxygen sinks besides aerobic respiration, such as rising bubbles. In tidal creeks, increasing nutrients may increase both production and respiration, without any apparent change in the net metabolism. In ponds, daytime production and respiration are also tightly coupled, but there is high background respiration regardless of changes in daytime production. Both tidal creeks and ponds have higher respiration rates and lower production rates than the marsh platform, suggesting that expansion of these submerged environments could limit the ability of salt marshes to sequester carbon.
    Description: Financial support for my doctoral research was provided by the United States Department of Defense through the National Defense Science and Engineering Graduate Fellowship Program, the National Science Foundation under grant OCE-1233678, and the Woods Hole Oceanographic Institution (WHOI) under grants from the WHOI Coastal Ocean Institute, Ocean and Climate Change Institute, and Ocean Life Institute. WHOI Academic Programs Office also provided funding support for research, through the Ocean Ventures Fund, and for my stipend, as graduate research assistantships including an assistantship from the United States Geological Survey administered by WHOI.
    Keywords: Marshes ; Chemistry ; Metabolism ; Knorr (Ship : 1970-) Cruise KN210-04
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  • 11
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution September 2016
    Description: The 21𝑠𝑡 century warming and acidification of tropical oceans will impact the structure and function of coral reef ecosystems. Consequently, conservation efforts are increasingly focused on identifying and protecting reef communities that demonstrate resilience to these changes. In this thesis, I develop a scientific framework for identifying climate change resilience in coral communities and, using Palau’s coral reefs as a case study, demonstrate the application of this approach. First, I use coral skeletal records to evaluate the sensitivity of coral communities to episodes of severe thermal stress. This information reveals coral reef communities that consistently exhibit weak responses to multiple high temperature events. Second, I evaluate coral reef community structure across a strong, natural pH gradient using metrics informed by laboratory ocean acidification studies. The coral communities of Palau’s Rock Island reefs show a level of pH tolerance that is unique amongst reefs studied to date. Third, I conduct laboratory and field experiments to constrain the pH thresholds of these resilient corals and investigate potential mechanisms for pH tolerance. Finally, I combine archipelago-wide coral temperature and pH sensitivity data to construct climate change resilience indices. My study succeeds in identifying a small number of coral communities that have the potential to withstand 21𝑠𝑡 century climate change and highlights the spatial variability in community responses to ocean warming and acidification. Critically, I present a set of scientific tools and approaches for identifying resilient coral reef communities that has applicability to coral reefs worldwide.
    Description: Funding for this research was provided by the Next Wave Fund Fellowship, a National Science Foundation Graduate Student Fellowship, the NSF-funded National Network for Ocean and Climate Change Interpretation, the James Stratton Fellowship, National Science Foundation awards OCE-1220529 and OCE-1031971 to Anne Cohen, The Tiffany & Co. Foundation, The Nature Conservancy, The Dalio Foundation, Inc., through the Dalio Explore Fund, and Ray Dalio through the WHOI Access to the Sea Fund.
    Keywords: Coral reef conservation ; Global warming
    Repository Name: Woods Hole Open Access Server
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  • 12
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution September 2016
    Description: Since the Last Glacial Maximum (LGM, ~ 20,000 years ago) air temperatures warmed, sea level rose roughly 130 meters, and atmospheric concentrations of carbon dioxide increased. This thesis combines global models and paleoceanographic observations to constrain the ocean’s role in storing and transporting heat, salt, and other tracers during this time, with implications for understanding how the modern ocean works and how it might change in the future. • By combining a kinematic ocean model with “upstream” and “downstream” deglacial oxygen isotope time series from benthic and planktonic foraminifera, I show that the data are in agreement with the modern circulation, quantify their power to infer circulation changes, and propose new data locations. • An ocean general circulation model (the MITgcm) constrained to fit LGM sea surface temperature proxy observations reveals colder ocean temperatures, greater sea ice extent, and changes in ocean mixed layer depth, and suggests that some features in the data are not robust. • A sensitivity analysis in the MITgcm demonstrates that changes in winds or in ocean turbulent transport can explain the hypothesis that the boundary between deep Atlantic waters originating from Northern and Southern Hemispheres was shallower at the LGM than it is today.
    Description: Support for this work came from an MIT Presidential Fellowship, an NSF Graduate Research Fellowship, and grants NASA NNX12AJ93G – Gravity data for ocean circulation and climate studies, NSF OCE-0961713 – Collaborative Research: The Physics and Statistics of Global Sea Level Change, NSF OCE-1060735 – Collaborative Research: Beyond the Instrumental Record - the Ocean Circulation at the last Glacial maximum and the deglacial sequence, and NASA NNX08AR33G – Application of Satellite Altimetry Gravity Winds and in Situ Data to Problems of the Ocean Circulation.
    Keywords: Global warming ; Ocean circulation
    Repository Name: Woods Hole Open Access Server
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