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  • Oceanography  (5)
  • Chemistry
  • Inorganic Chemistry
  • Massachusetts Institute of Technology and Woods Hole Oceanographic Institution  (7)
  • Station Océanographique de Salammbô  (2)
  • 2015-2019  (9)
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  • 1
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-26
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution September 2019.
    Description: This thesis addresses the dynamics of estuarine networks, based on hydrographic observations in Newark Bay, a sub-estuarine network connected to the Hudson River estuary through New York Harbor. Estuarine networks differ from simple estuaries in that they may have multiple connections to the ocean, multiple freshwater sources, and often contain complex junctions between estuarine segments. The Newark Bay estuarine network is connected to the sea through two tidal straits, and is fed by multiple internal and external sources of fresh water. The estuarine network is also naturally divided into a series of reaches, each of which is characterized by a different cross-sectional geometry. This thesis focuses on the hydrographic variability and varying exchange flow within the Newark Bay estuarine network. Shipboard hydrographic measurements reveal the time-dependent formation of salinity fronts between reaches of the estuary. Each front is generated by a different mechanism; however, all are generated by tidal flow through channel junctions during ebb tide, and are advected landward during flood tide. Mooring-based measurements confirm that these fronts form during nearly every tidal cycle, and that the fronts are associated with substantial changes in local salinity on tidal timescales. The effect of tidal processes, such as frontal advection, on the exchange flow is investigated by applying the isohaline total exchange flow (TEF) framework to mooring-based observations in multiple reaches of the estuarine network. This reveals that over half of the exchange flow is driven by tidal processes at all sites within the estuary. Both the TEF-based salt balance and the standard Eulerian salt balance indicate that tidal processes are also responsible for at least half of the landward salt flux at most sites within the estuary; TEF and Eulerian salt balances are nearly identical. Tidal processes within the estuary are in large part associated with fronts. The large influence of tidal processes on the exchange flow in Newark Bay is thus likely due to the prevalence of channel junctions within the estuarine network.
    Description: The studies contained in this thesis were largely funded as part of a National Science Foundation Coastal SEES project (Grant OCE-1325136), which was developed to investigate the effects of anthropogenic modifications on the physical processes in estuaries. Additional funding was provided by the J. Seward Johnson Fund at Woods Hole Oceanographic Institution, and by Hudson River Foundation Graduate Fellowship GF/01/17.
    Keywords: Dissertations, Academic ; Oceanography ; Marine sciences
    Repository Name: Woods Hole Open Access Server
    Type: Thesis
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  • 2
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-26
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Oceanography/Applied Ocean Science and Engineering at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution June 2019.
    Description: Submesoscale ocean dynamics and instabilities, with characteristic scales 0.1–10 km, can play a critical role in setting the ocean’s surface boundary layer thickness and associated density stratification. Submesoscale instabilities contribute to lateral stirring and tracer dispersal. These dynamics are investigated in the Bay of Bengal, motivated by the upper ocean’s potentially coupled interactions with Monsoon winds and convection. The region’s excess precipitation and runoff generates strong salinity gradients that typically set density fronts and stratification in the upper 50 m. Since we cannot synoptically measure currents containing fast-evolving and oscillating components across the submesoscale range, we instead analyze passive tracer distributions (spice ⌘ density-compensated temperature (T) and salinity (S) anomalies), identifying signatures of flows and testing dynamical theories. The analysis is based on over 9000 vertical profiles of T and S measured along ⇠4800 km of ship tracks in the Bay of Bengal during ASIRI and MISO-BOB expeditions in 2013, 2015, and 2018. Observations in the surface mixed layer reveal ⇠1 km scale-selective correlation of surface T and S, with compensation reducing cross-front density gradients by ⇠50%. Using a process study ocean model, we show this is caused by submesoscale instabilities slumping fronts, plus surface cooling over the resultant enhanced salinity stratification, potentially thwarting the forward cascade of energy. In the stratified interior, we present a spectral analysis of horizontal spice variance statistics from wavenumber k ⇠0.01 cpkm to ⇠1 cpkm. At scales 〈10 km, stratified layers that are closer to the surface exhibit redder passive tracer spectra (power spectra k−3, gradient spectra k−1) than predicted by quasi-geostrophic or frontogenetic theories. Complimentary observations reveal spice patterns with multiple, parallel, ⇠10 m thin layers, crossing isopycnals with O(10−4) slopes, coherent over at least 30–80 km, with coincident layers of stratification anomalies. Comparison with shear measurements, and a numerical process study, suggest that both submesoscale sheared eddies, and thin near-inertial waves, form such layers. Fast formation timescales and large aspect ratios suggest they enhance horizontal mixing by shear dispersion, reducing variance at ⇠1–10 km scales.
    Keywords: Oceanography ; Winds ; Salinity ; Oceanic mixing ; Bengal, Bay of ; Indian Ocean
    Repository Name: Woods Hole Open Access Server
    Type: Thesis
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  • 3
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-26
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Physical Oceanography at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution September 2019.
    Description: The Galápagos Cold Pool (GCP) is a region of anomalously cold sea surface temperature (SST) just west of the Galápagos Archipelago. Modeling studies have shown that the GCP is maintained by wind- and current-driven upwelling. The Galápagos Archipelago lies on the equator, in the path of the Pacific Equatorial Undercurrent (EUC) as it flows eastward across the Pacific at the depth of the thermocline. It is hypothesized that the EUC upwells into the GCP as it reaches the topographical barrier of the Galápagos Archipelago. The path of the EUC in the vicinity of the archipelago is not well understood. The ‘Repeat Observations by Gliders in the Equatorial Region’ (ROGER) program deployed a fleet of Spray autonomous underwater gliders in the region just west of the Galápagos Archipelago from 2013 – 2016 with the goal of continuously occupying three transects that form a closed area, with the archipelago as the eastern boundary. Gliders obtained subsurface measurements of temperature, salinity, and velocity with unprecedented temporal and spatial resolution. These measurements are used to observe the path of the EUC as it bifurcates into a north and south branch around the Galápagos Archipelago. Net horizontal transport into the volume defined by the closed area formed by the glider transects is used to estimate an average vertical velocity profile in the region of the GCP, indicating upwelling in the upper 300 m. The bifurcation latitude of the EUC, estimated to be approximately 0.4∘S from volume transport as a function of salinity, is coincident with the meridional center of the archipelago, suggesting the bifurcation latitude is topographically controlled. Ertel potential vorticity and a Bernoulli function are qualitatively conserved, supporting an inertial model of the EUC. Average spectral variance from Argo profiling float observations is used to show that tropical instability waves propagate with frequency and wavelength consistent with linearized, equatorial 𝛽-plane model results and may impact the GCP, according to their vertical structure.
    Description: Funding for my thesis research was provided by the National Science Foundation (grants OCE-1232971 and OCE-1233282), the NASA Earth and Space Science Fellowship Program (grant 80NSSC17K0443), the J. Seward Johnson Fund, and the Karen L. Von Damm Fellowship.
    Keywords: Ocean temperature ; Galapagos ; Hydrography ; Oceanography
    Repository Name: Woods Hole Open Access Server
    Type: Thesis
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  • 4
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution September 2018
    Description: Many chemical constituents are removed from the ocean by attachment to settling particles, a process referred to as “scavenging.” Radioisotopes of thorium, a highly particle-reactive element, have been used extensively to study scavenging in the ocean. However, this process is complicated by the highly variable chemical composition and concentration of particles in oceanic waters. This thesis focuses on understanding the cycling of thorium as affected by particle concentration and particle composition in the North Atlantic. This objective is addressed using (i) the distributions 228,230,234Th, their radioactive parents, particle composition, and bulk particle concentration, as measured or estimated along the GEOTRACES North Atlantic Transect (GA03) and (ii) a model for the reversible exchange of thorium with particles. Model parameters are either estimated by inversion (chapter 2-4), or prescribed in order to simulate 230Th in a circulation model (chapter 5). The major findings of this thesis follow. In chapters 2 and 3, I find that the rate parameters of the reversible exchange model show systematic variations along GA03. In particular, 𝑘1, the apparent first-order rate "constant" of Th adsorption onto particles, generally presents maxima in the mesopelagic zone and minima below. A positive correlation between 𝑘1 and bulk particle concentration is found, consistent with the notion that the specific rate at which a metal in solution attaches to particles increases with the number of surface sites available for adsorption. In chapter 4, I show that Mn (oxyhydr)oxides and biogenic particles most strongly influence 𝑘1 west of the Mauritanian upwelling, but that biogenic particles dominate 𝑘1 in this region. In chapter 5, I find that dissolved 230Th data are best represented by a model that assumes enhanced values of 𝑘1 near the seafloor. Collectively, my findings suggest that spatial variations in Th radioisotope activities observed in the North Atlantic reflect at least partly variations in the rate at which Th is removed from the water column.
    Description: This work was supported by the US National Science Foundation. Two US NSF grants have supported the research in this thesis (OCE-1232578 and OCE-155644).
    Keywords: Thorium ; Chemistry
    Repository Name: Woods Hole Open Access Server
    Type: Thesis
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  • 5
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution June 2017
    Description: This thesis documents the origin, distribution, and fate of methane and several of its isotopic forms on Earth. Using observational, experimental, and theoretical approaches, I illustrate how the relative abundances of 12CH4, 13CH4, 12CH3D, and 13CH3D record the formation, transport, and breakdown of methane in selected settings. Chapter 2 reports precise determinations of 13CH3D, a “clumped” isotopologue of methane, in samples collected from various settings representing many of the major sources and reservoirs of methane on Earth. The results show that the information encoded by the abundance of 13CH3D enables differentiation of methane generated by microbial, thermogenic, and abiogenic processes. A strong correlation between clumped- and hydrogen-isotope signatures in microbial methane is identified and quantitatively linked to the availability of H2 and the reversibility of microbially-mediated methanogenesis in the environment. Determination of 13CH3D in combination with hydrogen-isotope ratios of methane and water provides a sensitive indicator of the extent of C–H bond equilibration, enables fingerprinting of methane-generating mechanisms, and in some cases, supplies direct constraints for locating the waters from which migrated gases were sourced. Chapter 3 applies this concept to constrain the origin of methane in hydrothermal fluids from sediment-poor vent fields hosted in mafic and ultramafic rocks on slow- and ultraslow-spreading mid-ocean ridges. The data support a hypogene model whereby methane forms abiotically within plutonic rocks of the oceanic crust at temperatures above ca. 300 C during respeciation of magmatic volatiles, and is subsequently extracted during active, convective hydrothermal circulation. Chapter 4 presents the results of culture experiments in which methane is oxidized in the presence of O2 by the bacterium Methylococcus capsulatus strain Bath. The results show that the clumped isotopologue abundances of partially-oxidized methane can be predicted from knowledge of 13C/12C and D/H isotope fractionation factors alone.
    Description: The research activities documented in this thesis were made possible by grants to my advisor from the U.S. National Science Foundation (NSF award EAR-1250394), the National Aeronautics and Space Administration (NASA) Astrobiology Institute (NAI, University of Colorado, Boulder, CAN 7 under Cooperative Agreement NNA15BB02A), the Department of Energy (DOE, Small Business Innovation Research program, contract DE-SC0004575), the Alfred P. Sloan Foundation via the Deep Carbon Observatory, and a Shell Graduate Fellowship through the MIT Energy Initiative. I completed the bulk of the work in this thesis while being supported by a National Defense Science and Engineering Graduate (NDSEG) Fellowship awarded through the Office of Naval Research of the U.S. Department of Defense. The StanleyW.Watson Fellowship Fund provided support during my first summer term at WHOI.The Charles M. Vest Presidential Fellowship at MIT supported me in the first year of my Ph.D. studies. I received additional support that year through NSF award EAR-1159318 (to S. Ono and T. Bosak) and theWalter & Adel Hohenstein Graduate Fellowship of Phi Kappa Phi. The MIT Earth Resources Laboratory and PAOC Houghton Fund funded my attendance at several conferences.
    Keywords: Methane ; Chemistry ; Isotopes ; Oxidation
    Repository Name: Woods Hole Open Access Server
    Type: Thesis
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  • 6
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-26
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution February 2017
    Description: Salt marshes are physically, chemically, and biologically dynamic environments found globally at temperate latitudes. Tidal creeks and marshtop ponds may expand at the expense of productive grass-covered marsh platform. It is therefore important to understand the present magnitude and drivers of production and respiration in these submerged environments in order to evaluate the future role of salt marshes as a carbon sink. This thesis describes new methods to apply the triple oxygen isotope tracer of photosynthetic production in a salt marsh. Additionally, noble gases are applied to constrain air-water exchange processes which affect metabolism tracers. These stable, natural abundance tracers complement traditional techniques for measuring metabolism. In particular, they highlight the potential importance of daytime oxygen sinks besides aerobic respiration, such as rising bubbles. In tidal creeks, increasing nutrients may increase both production and respiration, without any apparent change in the net metabolism. In ponds, daytime production and respiration are also tightly coupled, but there is high background respiration regardless of changes in daytime production. Both tidal creeks and ponds have higher respiration rates and lower production rates than the marsh platform, suggesting that expansion of these submerged environments could limit the ability of salt marshes to sequester carbon.
    Description: Financial support for my doctoral research was provided by the United States Department of Defense through the National Defense Science and Engineering Graduate Fellowship Program, the National Science Foundation under grant OCE-1233678, and the Woods Hole Oceanographic Institution (WHOI) under grants from the WHOI Coastal Ocean Institute, Ocean and Climate Change Institute, and Ocean Life Institute. WHOI Academic Programs Office also provided funding support for research, through the Ocean Ventures Fund, and for my stipend, as graduate research assistantships including an assistantship from the United States Geological Survey administered by WHOI.
    Keywords: Marshes ; Chemistry ; Metabolism ; Knorr (Ship : 1970-) Cruise KN210-04
    Repository Name: Woods Hole Open Access Server
    Type: Thesis
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  • 7
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    Station Océanographique de Salammbô | Paris, France
    Publication Date: 2021-05-19
    Description: La détermination de la chloruration des eaux de mer est effectuée depuis de nombreuses années par la méthode volémetrisque de Moher.
    Description: Published
    Keywords: Volumetric analysis ; Sea water ; Chemistry ; Density ; Water density ; Chlorination ; Methodology ; Marine
    Repository Name: AquaDocs
    Type: Book/Monograph/Conference Proceedings , Refereed
    Format: 28pp.
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  • 8
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    Station Océanographique de Salammbô | Tunis, Tunisie
    Publication Date: 2021-05-19
    Description: L'etude d'ensemble montre la presence de deux secteurs orogeniques bien caracterises separes par la grande transversale du Zaghouan :les compartiments Constantinois-Tunisie et Tunisie orientale-Sicile. Elle montre que la Tunisie et la Sicile appartiennent au meme bati Siculo-Tunisien,dependance du vaste continent Africain.
    Description: Published
    Keywords: Submarines ; Oceanographic atlases ; Continental shelves ; Oceanography ; Marine geology ; Marine
    Repository Name: AquaDocs
    Type: Book/Monograph/Conference Proceedings , Refereed
    Format: 48 pp.
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  • 9
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    Massachusetts Institute of Technology and Woods Hole Oceanographic Institution
    Publication Date: 2022-05-25
    Description: Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy at the Massachusetts Institute of Technology and the Woods Hole Oceanographic Institution September 2016
    Description: Eddies in the ocean move westwards. Those shed by western boundary currents must then interact with continental shelf-slope topography at the western boundary. The presence of other eddies and mean lows complicates this simple picture, yet satellite images show that mesoscale eddies translating near the shelfbreak routinely affect the continental shelves of the Mid-Atlantic Bight, the Gulf of Mexico etc. The consequent cross-shelfbreak transports are currently of unknown importance to shelf budgets of heat, salt and volume. Thus motivated, this thesis uses idealized continuously stratified numerical experiments to explore eddy-slope interactions under four questions: 1. Can the continental slope prevent an eddy from reaching the shelfbreak? 2. What is the structure of the eddy-driven offshore low? 3. How is the continental shelf affected by an eddy at the shelfbreak? 4. Given surface observations, can one estimate the volume of water transported across the shelfbreak? The experiments show that the efficiency of Rossby wave radiation from the eddy controls whether it can cross isobaths: by radiating energy the eddy becomes shallow enough to move into shallower water. For wide continental slopes, relative to an eddy diameter, a slope can prevent an anticyclone from reaching the shelfbreak by shutting down such radiation. For narrow continental slopes, the interaction repeatedly produces dipoles, whose cyclonic halves contain shelf-slope water stacked over eddy water. The formation of such cyclones is explained. Then, the structure of shelf lows forced by the eddy are studied: their vertical structures are rationalized and scalings derived for their cross-isobath scales; for example, the extent to which the eddy influences the shelf. A recipe for estimating cross-isobath transports based on eddy surface properties is put forward. Finally, the findings are tested against observations in the Middle Atlantic Bight of the northeastern United States.
    Description: I acknowledge high-performance computing support from Yellowstone (ark:/85065/d7wd3xhc) provided by NCAR’s Computational and Information Systems Laboratory, sponsored by the National Science Foundation. The research presented here was funded by National Science Foundation grants OCE-1059632 and OCE-1433953. Funding support from the Academic Programs Oice, WHOI is also gratefully acknowledged.
    Keywords: Eddies ; Oceanography
    Repository Name: Woods Hole Open Access Server
    Type: Thesis
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