ALBERT — All Library Books, journals and Electronic Records Telegrafenberg

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Biogeography of soil microbial N-cycling traits [Ecology] (2016)

Nelson, M. B., Martiny, A. C., Martiny, J. B. H.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Microorganisms drive much of the Earth’s nitrogen (N) cycle, but we still lack a global overview of the abundance and composition of the microorganisms carrying out soil N processes. To address this gap, we characterized the biogeography of microbial N traits, defined as eight N-cycling pathways, using publically available soil...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

Print ISSN: 0027-8424

Electronic ISSN: 1091-6490

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Comparative phylogeography introduction [Biological Sciences] (2016)

Avise, J. C., Bowen, B. W., Ayala, F. J.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Phylogeography is the study of the spatial arrangement of genealogical lineages, especially within and among conspecific populations and closely related species (10). Ever since its inception in the late 1970s (11, 12) and mid-1980s (13), the field has sought to extend phylogenetic reasoning to the intraspecific level, and thereby build...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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Electronic ISSN: 1091-6490

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Comparative phylogeography in continental biotas [Evolution] (2016)

Riddle, B. R.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Deciphering the geographic context of diversification and distributional dynamics in continental biotas has long been an interest of biogeographers, ecologists, and evolutionary biologists. Thirty years ago, the approach now known as comparative phylogeography was introduced in a landmark study of a continental biota. Here, I use a set of 455...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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Electronic ISSN: 1091-6490

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Probability of monophyly on a species tree [Evolution] (2016)

Mehta, R. S., Bryant, D., Rosenberg, N. A.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Monophyletic groups—groups that consist of all of the descendants of a most recent common ancestor—arise naturally as a consequence of descent processes that result in meaningful distinctions between organisms. Aspects of monophyly are therefore central to fields that examine and use genealogical descent. In particular, studies in conservation genetics, phylogeography,...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

Print ISSN: 0027-8424

Electronic ISSN: 1091-6490

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Genealogy, genetics, and historical demography [Evolution] (2016)

Wakeley, J., King, L., Wilton, P. R.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Genetic variation among loci in the genomes of diploid biparental organisms is the result of mutation and genetic transmission through the genealogy, or population pedigree, of the species. We explore the consequences of this for patterns of variation at unlinked loci for two kinds of demographic events: the occurrence of...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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Electronic ISSN: 1091-6490

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Phenotypes in phylogeography [Evolution] (2016)

Zamudio, K. R., Bell, R. C., Mason, N. A.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Almost 30 y ago, the field of intraspecific phylogeography laid the foundation for spatially explicit and genealogically informed studies of population divergence. With new methods and markers, the focus in phylogeography shifted to previously unrecognized geographic genetic variation, thus reducing the attention paid to phenotypic variation in those same diverging...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

Print ISSN: 0027-8424

Electronic ISSN: 1091-6490

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Phylogeographic model selection [Evolution] (2016)

Thome, M. T. C., Carstens, B. C.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Phylogeographic research investigates biodiversity at the interface between populations and species, in a temporal and geographic context. Phylogeography has benefited from analytical approaches that allow empiricists to estimate parameters of interest from the genetic data (e.g., θ = 4Neμ, population divergence, gene flow), and the widespread availability of genomic data...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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Electronic ISSN: 1091-6490

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Refined hypotheses in comparative phylogeography [Evolution] (2016)

Papadopoulou, A., Knowles, L. L.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: For three decades, comparative phylogeography has conceptually and methodologically relied on the concordance criterion for providing insights into the historical/biogeographic processes driving population genetic structure and divergence. Here we discuss how this emphasis, and the corresponding lack of methods for extracting information about biotic/intrinsic contributions to patterns of genetic variation,...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

Print ISSN: 0027-8424

Electronic ISSN: 1091-6490

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Bison dispersal through the Ice Free Corridor [Ecology] (2016)

Heintzman, P. D., Froese, D., Ives, J. W., Soares, A. E. R., Zazula, G. D., Letts, B., Andrews, T. D., Driver, J. C., Hall, E., Hare, P. G., Jass, C. N., Mac; Kay, G., Southon, J. R., Stiller, M., Woywitka, R., Suchard, M. A., Shapiro, B.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: The Ice Free Corridor has been invoked as a route for Pleistocene human and animal dispersals between eastern Beringia and more southerly areas of North America. Despite the significance of the corridor, there are limited data for when and how this corridor was used. Hypothetical uses of the corridor include:...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

Print ISSN: 0027-8424

Electronic ISSN: 1091-6490

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Comparative phylogeography of the ocean planet [Evolution] (2016)

Bowen, B. W., Gaither, M. R., Di; Battista, J. D., Iacchei, M., Andrews, K. R., Grant, W. S., Toonen, R. J., Briggs, J. C.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Understanding how geography, oceanography, and climate have ultimately shaped marine biodiversity requires aligning the distributions of genetic diversity across multiple taxa. Here, we examine phylogeographic partitions in the sea against a backdrop of biogeographic provinces defined by taxonomy, endemism, and species composition. The taxonomic identities used to define biogeographic provinces...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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Island phylogeography [Evolution] (2016)

Shaw, K. L., Gillespie, R. G.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Remote island archipelagos offer superb opportunities to study the evolution of community assembly because of their relatively young and simple communities where speciation contributes to the origin and evolution of community structure. There is great potential for common phylogeographic patterns among remote archipelagos that originate through hotspot volcanism, particularly when...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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Reticulation and phylogeography [Evolution] (2016)

Edwards, S. V., Potter, S., Schmitt, C. J., Bragg, J. G., Moritz, C.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Phylogeography, and its extensions into comparative phylogeography, have their roots in the layering of gene trees across geography, a paradigm that was greatly facilitated by the nonrecombining, fast evolution provided by animal mtDNA. As phylogeography moves into the era of next-generation sequencing, the specter of reticulation at several levels—within loci...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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Phylogeography and landscape genetics [Evolution] (2016)

Rissler, L. J.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Phylogeography and landscape genetics have arisen within the past 30 y. Phylogeography is said to be the bridge between population genetics and systematics, and landscape genetics the bridge between landscape ecology and population genetics. Both fields can be considered as simply the amalgamation of classic biogeography with genetics and genomics;...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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Electronic ISSN: 1091-6490

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Human phylogeography and diversity [Anthropology] (2016)

Harcourt, A. H.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Homo sapiens phylogeography begins with the species’ origin nearly 200 kya in Africa. First signs of the species outside Africa (in Arabia) are from 125 kya. Earliest dates elsewhere are now 100 kya in China, 45 kya in Australia and southern Europe (maybe even 60 kya in Australia), 32 kya...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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Forest lizard phylogeography and climate change [Evolution] (2016)

Prates, I., Xue, A. T., Brown, J. L., Alvarado-Serrano, D. F., Rodrigues, M. T., Hickerson, M. J., Carnaval, A. C.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: We apply a comparative framework to test for concerted demographic changes in response to climate shifts in the neotropical lowland forests, learning from the past to inform projections of the future. Using reduced genomic (SNP) data from three lizard species codistributed in Amazonia and the Atlantic Forest (Anolis punctatus, Anolis...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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Evolutionary lessons from plant phylogeography [Evolution] (2016)

Sork, V. L., Gugger, P. F., Chen, J.-M., Werth, S.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Phylogeography documents the spatial distribution of genetic lineages that result from demographic processes, such as population expansion, population contraction, and gene movement, shaped by climate fluctuations and the physical landscape. Because most phylogeographic studies have used neutral markers, the role of selection may have been undervalued. In this paper, we...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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Electronic ISSN: 1091-6490

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Geogenetics of Madagascar's mouse lemurs [Evolution] (2016)

Yoder, A. D., Campbell, C. R., Blanco, M. B., dos Reis, M., Ganzhorn, J. U., Goodman, S. M., Hunnicutt, K. E., Larsen, P. A., Kappeler, P. M., Rasoloarison, R. M., Ralison, J. M., Swofford, D. L., Weisrock, D. W.

National Academy of Sciences

In: PNAS - Proceedings of the National Academy of Sciences

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Publication Date: 2016-07-21

Description: Phylogeographic analysis can be described as the study of the geological and climatological processes that have produced contemporary geographic distributions of populations and species. Here, we attempt to understand how the dynamic process of landscape change on Madagascar has shaped the distribution of a targeted clade of mouse lemurs (genus...

Keywords: Sackler Colloquium on In the Light of Evolution X: Comparative Phylogeography

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