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  • 1
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    In:  Blumea: Biodiversity, Evolution and Biogeography of Plants vol. 63, pp. 120-120
    Publication Date: 2024-07-08
    Description: Based on its morphology and in accordance with modern circumscriptions of genera among the Gleicheniaceae, a new combination in Sticherus is made for the Papua New Guinean fern originally described as Gleichenia hooglandii.
    Keywords: Gleichenia ; Gleicheniaceae ; Papua New Guinea ; Sticherus ; taxonomy
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
    Format: application/pdf
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  • 2
    Publication Date: 2024-07-08
    Keywords: 185-1149A; Amphibole; Carbonates; Chlorite; Chrysotile; Clay; Clay minerals; Clinoptilolite; Comment; Depth, composite; DEPTH, sediment/rock; Diatom abundance; DRILL; Drilling/drill rig; DSDP/ODP/IODP sample designation; Feldspar; Fish remains; Heavy minerals; Iron oxide; Joides Resolution; Leg185; Lithology/composition/facies; Manganese oxides; Mica 5Å/10Å; Nannofossil abundance; North Pacific Ocean; Ocean Drilling Program; ODP; Opaline particles; Opaque minerals; Pyroxene; Quartz; Radiolarians abundance; Sample code/label; Sand; Silicoflagellate abundance; Silt; Smear slide analysis; Sponge spiculae; Volcanic fragments; Volcanic glass
    Type: Dataset
    Format: text/tab-separated-values, 981 data points
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  • 3
    Publication Date: 2024-07-08
    Keywords: 199-1216A; Chert; Clay; Clay minerals; Comment; Depth, composite; DEPTH, sediment/rock; DRILL; Drilling/drill rig; DSDP/ODP/IODP sample designation; Fish remains; Iron oxide; Joides Resolution; Leg199; Lithology/composition/facies; Manganese oxides; North Pacific Ocean; Ocean Drilling Program; ODP; Opaque minerals; Oxides; Radiolarians abundance; Sample code/label; Sand; Smear slide analysis; Tephra/volcanic ash; Zeolite
    Type: Dataset
    Format: text/tab-separated-values, 217 data points
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  • 4
    Publication Date: 2024-07-08
    Keywords: 207-1260A; Barite; Calcareous spicules; Calcispheres; Calcite; Carbonates; Clay minerals; Comment; Depth, composite; DEPTH, sediment/rock; Diatom abundance; Dolomite; DRILL; Drilling/drill rig; DSDP/ODP/IODP sample designation; Fish remains; Foraminifera, benthic; Foraminifera, planktic abundance; Glauconite; Joides Resolution; Leg207; Lithology/composition/facies; Manganese oxides; Minerals; Nannofossil abundance; Ocean Drilling Program; ODP; Opaque minerals; Organic matter; Pellets; Phosphates; Pyrite; Quartz; Radiolarians abundance; Sample code/label; Silicoflagellate abundance; Smear slide analysis; South Atlantic Ocean; Zeolite
    Type: Dataset
    Format: text/tab-separated-values, 1117 data points
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  • 5
    Publication Date: 2024-07-08
    Keywords: 207-1261A; Accessories; Barite; Calcispheres; Calcite; Calpionellids; Carbonates; Clay minerals; Comment; Depth, composite; DEPTH, sediment/rock; Dinoflagellate abundance; Dolomite; DRILL; Drilling/drill rig; DSDP/ODP/IODP sample designation; Fish remains; Foraminifera, planktic abundance; Glauconite; Joides Resolution; Leg207; Lithology/composition/facies; Magnetite; Manganese oxides; Micrite; Nannofossil abundance; Ocean Drilling Program; ODP; Opaque minerals; Organic matter; Pollen; Pyrite; Quartz; Radiolarians abundance; Sample code/label; Smear slide analysis; Volcanic glass; Walvis Ridge, Southeast Atlantic Ocean; Zeolite
    Type: Dataset
    Format: text/tab-separated-values, 838 data points
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  • 6
    Publication Date: 2024-07-08
    Keywords: 207-1258A; Barite; Calcispheres; Calcite; Carbonates; Clay minerals; Coccoliths; Comment; Depth, composite; DEPTH, sediment/rock; Diatom abundance; Discoaster; Dolomite; DRILL; Drilling/drill rig; DSDP/ODP/IODP sample designation; Echinoid; Feldspar; Fish remains; Foraminifera, benthic; Foraminifera, planktic abundance; Glauconite; Joides Resolution; Leg207; Lithology/composition/facies; Manganese oxides; Mica; Minerals; Nannofossil abundance; Ocean Drilling Program; ODP; Opaque minerals; Organic matter; Pyrite; Quartz; Radiolarians abundance; Sample code/label; Smear slide analysis; South Atlantic Ocean; Zeolite
    Type: Dataset
    Format: text/tab-separated-values, 1128 data points
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  • 7
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    PANGAEA
    In:  Supplement to: Trimborn, Scarlett; Wolf-Gladrow, Dieter A; Richter, Klaus-Uwe; Rost, Björn (2009): The effect of pCO2 on carbon acquisition and intracellular assimilation in four marine diatoms. Journal of Experimental Marine Biology and Ecology, 376(1), 26-36, https://doi.org/10.1016/j.jembe.2009.05.017
    Publication Date: 2024-07-08
    Description: The effect of pCO2 on carbon acquisition and intracellular assimilation was investigated in the three bloom-forming diatom species, Eucampia zodiacus (Ehrenberg), Skeletonema costatum (Greville) Cleve, Thalassionema nitzschioides (Grunow) Mereschkowsky and the non-bloom-forming Thalassiosira pseudonana (Hust.) Hasle and Heimdal. In vivo activities of carbonic anhydrase (CA), photosynthetic O2 evolution, CO2 and HCO3? uptake rates were measured by membrane-inlet mass spectrometry (MIMS) in cells acclimated to pCO2 levels of 370 and 800 ?atm. To investigate whether the cells operate a C4-like pathway, activities of ribulose-1,5-bisphosphate carboxylase (RubisCO) and phosphoenolpyruvate carboxylase (PEPC) were measured at the mentioned pCO2 levels and a lower pCO2 level of 50 ?atm. In the bloom-forming species, extracellular CA activities strongly increased with decreasing CO2 supply while constantly low activities were obtained for T. pseudonana. Half-saturation concentrations (K1/2) for photosynthetic O2 evolution decreased with decreasing CO2 supply in the two bloom-forming species S. costatum and T. nitzschioides, but not in T. pseudonana and E. zodiacus. With the exception of S. costatum, maximum rates (Vmax) of photosynthesis remained constant in all investigated diatom species. Independent of the pCO2 level, PEPC activities were significantly lower than those for RubisCO, averaging generally less than 3%. All examined diatom species operate highly efficient CCMs under ambient and high pCO2, but differ strongly in the degree of regulation of individual components of the CCM such as Ci uptake kinetics and extracellular CA activities. The present data do not suggest C4 metabolism in the investigated species.
    Keywords: Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Aragonite saturation state; Bicarbonate ion; Bicarbonate uptake; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated after Freeman & Hayes (1992); Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chromista; EPOCA; Eucampia zoodiacus; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Extracellular carbonic anhydrase activity; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Intracellular carbonic anhydrase activity per chlorophyll a; Isotopic fractionation, during photosynthis; Laboratory experiment; Laboratory strains; Light:Dark cycle; Measured by loss of 18O (Silverman, 1982); Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Ochrophyta; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH meter, WTW, pH 3000; Phytoplankton; Primary production/Photosynthesis; Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas; Radiation, photosynthetically active; Salinity; see reference(s); Single species; Skeletonema costatum; Species; SPP1158; Temperature, water; Thalassionema nitzschioides; Thalassiosira pseudonana
    Type: Dataset
    Format: text/tab-separated-values, 1263 data points
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  • 8
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    PANGAEA
    In:  Supplement to: Kranz, Sven A; Sültemeyer, Dieter; Richter, Klaus-Uwe; Rost, Björn (2009): Carbon acquisition by Trichodesmium: the effect of pCO2 and diurnal changes. Limnology and Oceanography, 54(2), 548-559, https://doi.org/10.4319/lo.2009.54.2.0548
    Publication Date: 2024-07-08
    Description: We investigated carbon acquisition by the N2-fixing cyanobacterium Trichodesmium IMS101 in response to CO2 levels of 15.1, 37.5, and 101.3 Pa (equivalent to 150, 370, and 1000 ppm). In these acclimations, growth rates as well as cellular C and N contents were measured. In vivo activities of carbonic anhydrase (CA), photosynthetic O2 evolution, and CO2 and HCO3- fluxes were measured using membrane inlet mass spectrometry and the 14C disequilibrium technique. While no differences in growth rates were observed, elevated CO2 levels caused higher C and N quotas and stimulated photosynthesis and N2 fixation. Minimal extracellular CA (eCA) activity was observed, indicating a minor role in carbon acquisition. Rates of CO2 uptake were small relative to total inorganic carbon (Ci) fixation, whereas HCO{3 contributed more than 90% and varied only slightly over the light period and between CO2 treatments. The low eCA activity and preference for HCO3- were verified by the 14C disequilibrium technique. Regarding apparent affinities, half-saturation concentrations (K1/2) for photosynthetic O2 evolution and HCO3- uptake changed markedly over the day and with CO2 concentration. Leakage (CO2 efflux : Ci uptake) showed pronounced diurnal changes. Our findings do not support a direct CO2 effect on the carboxylation efficiency of ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) but point to a shift in resource allocation among photosynthesis, carbon acquisition, and N2 fixation under elevated CO2 levels. The observed increase in photosynthesis and N2fixation could have potential biogeochemical implications, as it may stimulate productivity in N-limited oligotrophic regions and thus provide a negative feedback in rising atmospheric CO2 levels.
    Keywords: Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Alkalinity, total, standard deviation; Aragonite saturation state; Bacteria; Based on changes in chla/cells/POC/PON; Bicarbonate ion; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbon/Nitrogen ratio; Carbon/Nitrogen ratio, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Carbon dioxide, total; Conductivity meter (WTW, Weilheim, Gemany); Cyanobacteria; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Growth rate, standard deviation; Laboratory experiment; Laboratory strains; Mass spectrometer ANCA-SL 20-20 Europa Scientific; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Particulate organic carbon, per cell; Particulate organic carbon content per cell, standard deviation; Particulate organic nitrogen per cell; Particulate organic nitrogen per cell, standard deviation; Pelagos; pH; pH, Electrode; pH, standard deviation; Phosphate; Phytoplankton; Radiation, photosynthetically active; Salinity; Single species; Temperature, water; Trichodesmium sp.; Walz 4pi sensor
    Type: Dataset
    Format: text/tab-separated-values, 96 data points
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  • 9
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    PANGAEA
    In:  Supplement to: Yang, Yan; Hansson, L; Gattuso, Jean-Pierre (2016): Data compilation on the biological response to ocean acidification: an update. Earth System Science Data, 8(1), 79-87, https://doi.org/10.5194/essd-8-79-2016
    Publication Date: 2024-07-08
    Description: The exponential growth of studies on the biological response to ocean acidification over the last few decades has generated a large amount of data. To facilitate data comparison, a data compilation hosted at the data publisher PANGAEA was initiated in 2008 and is updated on a regular basis (doi:10.1594/PANGAEA.149999). By January 2015, a total of 581 data sets (over 4 000 000 data points) from 539 papers had been archived. Here we present the developments of this data compilation five years since its first description by Nisumaa et al. (2010). Most of study sites from which data archived are still in the Northern Hemisphere and the number of archived data from studies from the Southern Hemisphere and polar oceans are still relatively low. Data from 60 studies that investigated the response of a mix of organisms or natural communities were all added after 2010, indicating a welcomed shift from the study of individual organisms to communities and ecosystems. The initial imbalance of considerably more data archived on calcification and primary production than on other processes has improved. There is also a clear tendency towards more data archived from multifactorial studies after 2010. For easier and more effective access to ocean acidification data, the ocean acidification community is strongly encouraged to contribute to the data archiving effort, and help develop standard vocabularies describing the variables and define best practices for archiving ocean acidification data.
    Keywords: Biological process; Country; Experimental treatment; Geographic name/locality; Number; Persistent Identifier; Taxon/taxa; Title
    Type: Dataset
    Format: text/tab-separated-values, 4644 data points
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  • 10
    Publication Date: 2024-07-08
    Keywords: Abrupt Climate Changes and Environmental Responses; ACER
    Type: Dataset
    Format: application/zip, 9.3 MBytes
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