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  • Articles  (21)
  • Mixing  (12)
  • Internal waves  (10)
  • American Meteorological Society  (15)
  • American Geophysical Union  (6)
  • Blackwell Publishing Ltd
  • International Union of Crystallography
  • Springer Nature
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  • 1
    Publication Date: 2022-10-21
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Warner, J. C., Geyer, W. R., Ralston, D. K., & Kalra, T. Using tracer variance decay to quantify variability of salinity mixing in the Hudson River Estuary. Journal of Geophysical Research: Oceans, 125(12), (2020): e2020JC016096, https://doi.org/10.1029/2020JC016096.
    Description: The salinity structure in an estuary is controlled by time‐dependent mixing processes. However, the locations and temporal variability of where significant mixing occurs is not well‐understood. Here we utilize a tracer variance approach to demonstrate the spatial and temporal structure of salinity mixing in the Hudson River Estuary. We run a 4‐month hydrodynamic simulation of the tides, currents, and salinity that captures the spring‐neap tidal variability as well as wind‐driven and freshwater flow events. On a spring‐neap time scale, salinity variance dissipation (mixing) occurs predominantly during the transition from neap to spring tides. On a tidal time scale, 60% of the salinity variance dissipation occurs during ebb tides and 40% during flood tides. Spatially, mixing during ebbs occurs primarily where lateral bottom salinity fronts intersect the bed at the transition from the main channel to adjacent shoals. During ebbs, these lateral fronts form seaward of constrictions located at multiple locations along the estuary. During floods, mixing is generated by a shear layer elevated in the water column at the top of the mixed bottom boundary layer, where variations in the along channel density gradients locally enhance the baroclinic pressure gradient leading to stronger vertical shear and more mixing. For both ebb and flood, the mixing occurs at the location of overlap of strong vertical stratification and eddy diffusivity, not at the maximum of either of those quantities. This understanding lends a new insight to the spatial and time dependence of the estuarine salinity structure.
    Description: This study was funded through the Coastal Model Applications and Field Measurements Project and the Cross‐shore and Inlets Project, US Geological Survey Coastal Marine Hazards and Resources Program. Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the US Government.
    Keywords: Hudson River Estuary ; Mixing ; Numerical modeling ; Tracer variance
    Repository Name: Woods Hole Open Access Server
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  • 2
    Publication Date: 2022-12-09
    Description: Author Posting. © American Meteorological Society, 2022. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 52(7), (2022): 1333-1350, https://doi.org/10.1175/jpo-d-21-0298.1.
    Description: Idealized numerical simulations were conducted to investigate the influence of channel curvature on estuarine stratification and mixing. Stratification is decreased and tidal energy dissipation is increased in sinuous estuaries compared to straight channel estuaries. We applied a vertical salinity variance budget to quantify the influence of straining and mixing on stratification. Secondary circulation due to the channel curvature is found to affect stratification in sinuous channels through both lateral straining and enhanced vertical mixing. Alternating negative and positive lateral straining occur in meanders upstream and downstream of the bend apex, respectively, corresponding to the normal and reversed secondary circulation with curvature. The vertical mixing is locally enhanced in curved channels with the maximum mixing located upstream of the bend apex. Bend-scale bottom salinity fronts are generated near the inner bank upstream of the bend apex as a result of interaction between the secondary flow and stratification. Shear mixing at bottom fronts, instead of overturning mixing by the secondary circulation, provides the dominant mechanism for destruction of stratification. Channel curvature can also lead to increased drag, and using a Simpson number with this increased drag coefficient can relate the decrease in stratification with curvature to the broader estuarine parameter space.
    Description: The research leading to these results was funded by NSF Awards OCE-1634481 and OCE-2123002.
    Description: 2022-12-09
    Keywords: Estuaries ; Mixing ; Secondary circulation ; Fronts ; Tides ; Numerical analysis/modeling
    Repository Name: Woods Hole Open Access Server
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  • 3
    Publication Date: 2022-12-24
    Description: Author Posting. © American Geophysical Union, 2022. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 127(7), (2022): e2021JC018333, https://doi.org/10.1029/2021JC018333.
    Description: As part of a project focused on the coastal fisheries of Isla Natividad, an island on the Pacific coast of Baja California, Mexico, we conducted a 2-1/2 year study of flows at two sites within the island's kelp forests. At one site (Punta Prieta), currents are tidal, whereas at the other site (Morro Prieto), currents are weaker and may be more strongly influenced by wind forcing. Satellite estimates of the biomass of the giant kelp (Macrocystis pyrifera) for this period varied between 0 (no kelp) and 3 kg/m2 (dense kelp forest), including a period in which kelp entirely was absent as a result of the 2014–2015 “Warm Blob” in the Eastern Pacific. During this natural “deforestation experiment”, alongshore velocities at both sites when kelp was present were substantially weaker than when kelp was absent, with low-frequency alongshore currents attenuated more than higher frequency ones, behavior that was the same at both sites despite differences in forcing. The attenuation of cross-shore flows by kelp was less than alongshore flows; thus, residence times for water inside the kelp forest, which are primarily determined by cross-shore velocities, were only weakly affected by the presence or absence of kelp. The flow changes we observed in response to changes in kelp density are important to the biogeochemical functioning of the kelp forest in that slower flows imply longer residence times, and, are also ecologically relevant in that reduced tidal excursions may lead to more localized recruitment of planktonic larvae.
    Description: The work we describe here was supported by NSF grants DEB 1212124, OCE 1416934, OCE 1736830, and OCE 2022927, by an equipment grant from the Kuwait Foundation for the Advancement of Sciences, and through grants from the Marisla Foundation, Packard Foundation, and Walton Family Foundation.
    Description: 2022-12-24
    Keywords: Kelp ; Tides ; Coastal circulation ; Mixing
    Repository Name: Woods Hole Open Access Server
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  • 4
    Publication Date: 2022-05-26
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 50(2), (2020): 415-437, doi:10.1175/JPO-D-19-0019.1.
    Description: Results are presented from two dye release experiments conducted in the seasonal thermocline of the Sargasso Sea, one in a region of low horizontal strain rate (~10−6 s−1), the second in a region of intermediate horizontal strain rate (~10−5 s−1). Both experiments lasted ~6 days, covering spatial scales of 1–10 and 1–50 km for the low and intermediate strain rate regimes, respectively. Diapycnal diffusivities estimated from the two experiments were κz = (2–5) × 10−6 m2 s−1, while isopycnal diffusivities were κH = (0.2–3) m2 s−1, with the range in κH being less a reflection of site-to-site variability, and more due to uncertainties in the background strain rate acting on the patch combined with uncertain time dependence. The Site I (low strain) experiment exhibited minimal stretching, elongating to approximately 10 km over 6 days while maintaining a width of ~5 km, and with a notable vertical tilt in the meridional direction. By contrast, the Site II (intermediate strain) experiment exhibited significant stretching, elongating to more than 50 km in length and advecting more than 150 km while still maintaining a width of order 3–5 km. Early surveys from both experiments showed patchy distributions indicative of small-scale stirring at scales of order a few hundred meters. Later surveys show relatively smooth, coherent distributions with only occasional patchiness, suggestive of a diffusive rather than stirring process at the scales of the now larger patches. Together the two experiments provide important clues as to the rates and underlying processes driving diapycnal and isopycnal mixing at these scales.
    Description: Results are presented from two dye release experiments conducted in the seasonal thermocline of the Sargasso Sea, one in a region of low horizontal strain rate (~10−6 s−1), the second in a region of intermediate horizontal strain rate (~10−5 s−1). Both experiments lasted ~6 days, covering spatial scales of 1–10 and 1–50 km for the low and intermediate strain rate regimes, respectively. Diapycnal diffusivities estimated from the two experiments were κz = (2–5) × 10−6 m2 s−1, while isopycnal diffusivities were κH = (0.2–3) m2 s−1, with the range in κH being less a reflection of site-to-site variability, and more due to uncertainties in the background strain rate acting on the patch combined with uncertain time dependence. The Site I (low strain) experiment exhibited minimal stretching, elongating to approximately 10 km over 6 days while maintaining a width of ~5 km, and with a notable vertical tilt in the meridional direction. By contrast, the Site II (intermediate strain) experiment exhibited significant stretching, elongating to more than 50 km in length and advecting more than 150 km while still maintaining a width of order 3–5 km. Early surveys from both experiments showed patchy distributions indicative of small-scale stirring at scales of order a few hundred meters. Later surveys show relatively smooth, coherent distributions with only occasional patchiness, suggestive of a diffusive rather than stirring process at the scales of the now larger patches. Together the two experiments provide important clues as to the rates and underlying processes driving diapycnal and isopycnal mixing at these scales.
    Description: 2020-08-06
    Keywords: Ocean ; Atlantic Ocean ; Diapycnal mixing ; Diffusion ; Dispersion ; Mixing
    Repository Name: Woods Hole Open Access Server
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  • 5
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2020. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 125(5), (2020): e2019JC015377, doi:10.1029/2019JC015377.
    Description: Internal waves strongly influence the physical and chemical environment of coastal ecosystems worldwide. We report novel observations from a distributed temperature sensing (DTS) system that tracked the transformation of internal waves from the shelf break to the surf zone over a narrow shelf slope region in the South China Sea. The spatially continuous view of temperature fields provides a perspective of physical processes commonly available only in laboratory settings or numerical models, including internal wave reflection off a natural slope, shoreward transport of dense fluid within trapped cores, and observations of internal rundown (near‐bed, offshore‐directed jets of water preceding a breaking internal wave). Analysis shows that the fate of internal waves on this shelf—whether transmitted into shallow waters or reflected back offshore—is mediated by local water column density structure and background currents set by the previous shoaling internal waves, highlighting the importance of wave‐wave interactions in nearshore internal wave dynamics.
    Description: We are grateful for the support of the Dongsha Atoll Research Station (DARS) and the Dongsha Atoll Marine National Park, whose efforts made this research possible. The authors would also like to thank A. Hall, S. Tyler, and J. Selker from the Center for Transformative Environmental Monitoring Programs (CTEMPs) funded by the National Science Foundation (EAR awards 1440596 and 1440506), G. Lohmann from WHOI, A. Safaie from UC Irvine, G. Wong, L. Hou, F. Shiah, and K. Lee from Academia Sinica for providing logistical and field support, as well as E. Pawlak, S. Lentz, B. Sanders, and S. Grant for equipment, and B. Raubenheimer, S. Elgar, R. Walter and D. Lucas for informative discussions that improved this work. We acknowledge the US Army Research Laboratory DoD Supercomputing Resource Center for computer time on Excalibur, which was used for the numerical simulations in this work. Funding for this work supported by Academia Sinica and for K.D. and E.R. from NSF‐OCE 1753317 and for O.F., J.R., and R.A. from ONR Grant 1182789‐1‐TDZZM. A portion of this work (R.A.) was performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE‐AC52‐07NA27344.
    Description: 2020-10-21
    Keywords: Internal waves ; Distributed temperature sensing ; Coral reef ; Internal wave reflection
    Repository Name: Woods Hole Open Access Server
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  • 6
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2022. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 127(4), (2022): e2021JC018246, https://doi.org/10.1029/2021jc018246.
    Description: Storm surge barriers are increasingly being considered as risk mitigation measures for coastal population centers. During non-storm periods, permanent barrier infrastructure reduces the flow cross-sectional area and affects tidal exchange. Effects of barrier structures on estuarine tidal and salinity dynamics have not been extensively examined, particularly for partially mixed estuaries. A nested, high-resolution model is used to characterize impacts of a potential storm surge barrier near the mouth of the Hudson River estuary. Maximum tidal velocities through barrier openings are more than double those in the base case. Landward of the barrier, tidal amplitude decreases on average by about 6% due to increased drag. The drag coefficient with the barrier is about 5 times greater than the base case due primarily to form drag from flow separation at barrier structures rather than increased bottom friction. The form drag scales with barrier geometry similar to previous studies of flow around headlands. Tidal water levels are reduced particularly during spring tides, such that marsh inundation frequency is reduced up to 25%. Strong tidal velocities through barrier openings enhance salinity mixing locally, but overall mixing in the estuary decreases due to reduced tidal velocities. Correspondingly, stratification decreases near the barrier and increases landward in the estuary. The salinity intrusion length increases by 5%–15% depending on discharge due to the decreased mixing and increased exchange flow. Exchange flow increases near the barrier due reflux into the lower layer with the increased mixing, which has the potential to increase estuarine residence times.
    Description: Funding from Hudson Research Foundation (Award #003/19A).
    Description: 2022-10-11
    Keywords: Storm surge barrier ; Form drag ; Mixing ; Stratification ; Exchange flow ; Salinity intrusion
    Repository Name: Woods Hole Open Access Server
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  • 7
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2021. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Geophysical Research Letters 48(8), (2021): e2020GL089471, https://doi.org/10.1029/2020GL089471.
    Description: Major gaps exist in our understanding of the pathways between internal wave generation and breaking in the Southern Ocean, with important implications for the distribution of internal wave-driven mixing, the sensitivity of ocean mixing rates and patterns to changes in the ocean environment, and the necessary ingredients of mixing parameterizations. Here we assess the dominant processes in internal wave evolution by characterizing wave and mesoscale flow scales based on full-depth in situ measurements in a Southern Ocean mixing hot spot and a ray tracing calculation. The exercise highlights the importance of Antarctic Circumpolar Current jets as a dominant influence on internal wave life cycles through advection, the modification of wave characteristics via wave-mean flow interactions, and the set-up of critical layers for both upward- and downward-propagating waves. Our findings suggest that it is important to represent mesoscale flow impacts in parameterizations of internal wave-driven mixing in the Southern Ocean.
    Description: The SOFine project was funded by the UK Natural Environmental Research Council (NERC) (grant NE/G001510/1). S. Waterman is currently supported by the National Science and Engineering Research Council of Canada (NSERC) Discovery Grant Program (NSERC-2020-05799). A. Meyer acknowledges current support from the ARC Centre of Excellence for Climate Extremes (CE170100023) and previous support from the joint CSIRO-University of Tasmania Quantitative Marine Science (QMS) program. A. N. Garabato acknowledges the support of the Royal Society and the Wolfson Foundation.
    Keywords: Internal waves ; Internal wave-driven turbulent mixing ; Internal wave-mesoscale flow interactions ; Southern Ocean
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  • 8
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2022. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 127(5), (2022): e2021JC018056, https://doi.org/10.1029/2021jc018056.
    Description: As Arctic sea ice declines, wind energy has increasing access to the upper ocean, with potential consequences for ocean mixing, stratification, and turbulent heat fluxes. Here, we investigate the relationships between internal wave energy, turbulent dissipation, and ice concentration and draft using mooring data collected in the Beaufort Sea during 2003–2018. We focus on the 50–300 m depth range, using velocity and CTD records to estimate near-inertial shear and energy, a finescale parameterization to infer turbulent dissipation rates, and ice draft observations to characterize the ice cover. All quantities varied widely on monthly and interannual timescales. Seasonally, near-inertial energy increased when ice concentration and ice draft were low, but shear and dissipation did not. We show that this apparent contradiction occurred due to the vertical scales of internal wave energy, with open water associated with larger vertical scales. These larger vertical scale motions are associated with less shear, and tend to result in less dissipation. This relationship led to a seasonality in the correlation between shear and energy. This correlation was largest in the spring beneath full ice cover and smallest in the summer and fall when the ice had deteriorated. When considering interannually averaged properties, the year-to-year variability and the short ice-free season currently obscure any potential trend. Implications for the future seasonal and interannual evolution of the Arctic Ocean and sea ice cover are discussed.
    Description: This work was supported by the Postdoctoral Scholar Program at Woods Hole Oceanographic Institution, with funding provided by the Weston Howland Jr. Postdoctoral Scholarship. S. T. Cole was supported by Office of Naval Research grant N00014-16-1-2381.
    Description: 2022-10-14
    Keywords: Arctic ; Internal waves ; Mixing ; Sea ice ; Turbulence
    Repository Name: Woods Hole Open Access Server
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  • 9
    Publication Date: 2022-05-27
    Description: Author Posting. © American Meteorological Society, 2021. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 51(1), (2021): 19-35, https://doi.org/10.1175/JPO-D-19-0233.1.
    Description: In the Beaufort Sea in September of 2015, concurrent mooring and microstructure observations were used to assess dissipation rates in the vicinity of 72°35′N, 145°1′W. Microstructure measurements from a free-falling profiler survey showed very low [O(10−10) W kg−1] turbulent kinetic energy dissipation rates ε. A finescale parameterization based on both shear and strain measurements was applied to estimate the ratio of shear to strain Rω and ε at the mooring location, and a strain-based parameterization was applied to the microstructure survey (which occurred approximately 100 km away from the mooring site) for direct comparison with microstructure results. The finescale parameterization worked well, with discrepancies ranging from a factor of 1–2.5 depending on depth. The largest discrepancies occurred at depths with high shear. Mean Rω was 17, and Rω showed high variability with values ranging from 3 to 50 over 8 days. Observed ε was slightly elevated (factor of 2–3 compared with a later survey of 11 profiles taken over 3 h) from 25 to 125 m following a wind event which occurred at the beginning of the mooring deployment, reaching a maximum of ε= 6 × 10−10 W kg−1 at 30-m depth. Velocity signals associated with near-inertial waves (NIWs) were observed at depths greater than 200 m, where the Atlantic Water mass represents a reservoir of oceanic heat. However, no evidence of elevated ε or heat fluxes was observed in association with NIWs at these depths in either the microstructure survey or the finescale parameterization estimates.
    Description: This work was supported by NSF Grants PLR 14-56705 and PLR-1303791 and by NSF Graduate Research Fellowship Grant DGE-1650112.
    Keywords: Ocean ; Arctic ; Internal waves ; Turbulence ; Diapycnal mixing
    Repository Name: Woods Hole Open Access Server
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  • 10
    Publication Date: 2022-05-27
    Description: Author Posting. © American Meteorological Society, 2020. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 50(11), (2020): 3267–3294, https://doi.org/10.1175/JPO-D-19-0310.1.
    Description: As part of the Flow Encountering Abrupt Topography (FLEAT) program, an array of pressure-sensor equipped inverted echo sounders (PIESs) was deployed north of Palau where the westward-flowing North Equatorial Current encounters the southern end of the Kyushu–Palau Ridge in the tropical North Pacific. Capitalizing on concurrent observations from satellite altimetry, FLEAT Spray gliders, and shipboard hydrography, the PIESs’ 10-month duration hourly bottom pressure p and round-trip acoustic travel time τ records are used to examine the magnitude and predictability of sea level and pycnocline depth changes and to track signal propagations through the array. Sea level and pycnocline depth are found to vary in response to a range of ocean processes, with their magnitude and predictability strongly process dependent. Signals characterized here comprise the barotropic tides, semidiurnal and diurnal internal tides, southeastward-propagating superinertial waves, westward-propagating mesoscale eddies, and a strong signature of sea level increase and pycnocline deepening associated with the region’s relaxation from El Niño to La Niña conditions. The presence of a broad band of superinertial waves just above the inertial frequency was unexpected and the FLEAT observations and output from a numerical model suggest that these waves detected near Palau are forced by remote winds east of the Philippines. The PIES-based estimates of pycnocline displacement are found to have large uncertainties relative to overall variability in pycnocline depth, as localized deep current variations arising from interactions of the large-scale currents with the abrupt topography around Palau have significant travel time variability.
    Description: Support for this research was provided by Office of Naval Research Grants N00014-16-1-2668, N00014-18-1-2406, N00014-15-1-2488, and N00014-15-1-2622. R.C.M. was additionally supported by the Postdoctoral Scholar Program at the Woods Hole Oceanographic Institution, with funding provided by the Weston Howland Jr. Postdoctoral Scholarship.
    Keywords: Tropics ; Currents ; Eddies ; ENSO ; Internal waves ; Mesoscale processes
    Repository Name: Woods Hole Open Access Server
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