ALBERT

Beschreibung: Here, we outline how to identify hydrogenase enzymes from metagenomic fosmid libraries through an activity-based screening approach. A metagenomic fosmid library is constructed in E. coli and the fosmids are transferred into a hydrogenase deletion mutant of Shewanella oneidensis MR-1 (ΔhyaB) via triparental mating. If a fosmid clone exhibits hydrogen-uptake activity, S. oneidensis’ phenotype is restored and hydrogenase activity is indicated by a color change of the medium from yellow to colorless. The screen enables screening of 48 metagenomic fosmid clones in parallel.

Beschreibung: Bacteriophages, also called phages, are viruses of bacteria. They are the most common and diverse biological entities on this planet. For metagenomic investigation, their diversity is also their biggest obstacle. The direct metagenomic sequence of environmental phage communities often leads to short genomic fragments limiting the investigation to a few individual aspects of phage biology and diversity. The presented protocol for generating a host-associated metagenome reduces the phage diversity to a concise and accessible size. Metagenome sequencing often leads to complete genomes, and the availability of a suitable host system ensures further experimental investigation.

Beschreibung: Most fish stocks in the European Union (EU) are still being overfished. One recent measure of the EU common fisheries policy to curb overfishing is the introduction of landing obligations that are meant to reduce discards, but the success of landing obligations is controversial, as discards still take place. In the German Western Baltic Sea , discards are currently estimated using ship observer data, but vessels 〈12 m are not sufficiently controlled. We here use an independent method and document widespread discard of undersized cod and flatfish in late summer 2018 using video transects. Discards along the coastline of the south-western Baltic Sea amount to an extrapolated 14.0 t of cod and 1.0 t of flatfish decomposing on the sea floor in 1-13 m depth in a subarea of Mecklenburg Bight that covers only 2.3% of ICES (International Council for the Exploration of the Sea ) subdivisions 22-24, the habitat of Western Baltic cod. Compared to a similar video-mapping seven years earlier (in 2011), the amount of discard increased markedly, suggesting that the implementation of landing obligations in the time between the two mappings for under-sized catches has not resulted in a decrease but an increase of discards. We suggest that higher observed discards of cod in 2018 are also due to a high percentage of cod coming from the 2016-cohort of the Western Baltic cod stock which are just undersized but nevertheless caught by most passive net gear. Our data complement estimates based on ship observer data, while providing the first direct evidence of the fate of discards in the benthic marine habitat.

Beschreibung: Although considerable progress has been made in the management and planning of the marine environment, important gaps still exist in streamlining policies across governance levels, maritime sectors, and between different countries. This can hinder effective Maritime Spatial Planning (MSP) and prevent harmonious cross-sectoral cooperation, and importantly, cross-border or trans-boundary collaboration. These may in turn have serious implications for overall ocean governance and ultimately, marine sustainability. The North Atlantic presents an ideal case-study region for reviewing these issues: North Atlantic countries have different governance structures, and as such, different approaches to marine policy. Therefore, for an effective marine management, cross-sectoral and cross-border MSP in the region, there is a need to review marine and maritime policies in order to identify differences and commonalities among countries. This chapter reviews major policies for the marine environment in the North Atlantic and assesses where differences between countries exist and at which governance level they are being created. Key research questions include: (i) Are there significant differences in marine policy between North Atlantic countries? Moreover, are there any substantial geographical/political differences? (ii) Are there differences in implementation of key policies? Such an analysis requires a sound framework for comparison among countries. To that end, the use of “horrendograms”, a tool increasingly being used by the marine research and planning community to assess such issues, is adopted. Results indicate that key differences between countries are created primarily at a national level of marine governance. Although differences between countries exist, overall strategic targets are similar. For instance, whilst the political systems of certain North Atlantic countries may differ substantially, key objectives for major sectors, such as fisheries and conservation, are similar – even when such objectives are implemented at different levels. Findings from the study can enable targeted policy intervention and, as such, assist the development of future outlooks of ocean governance in the region. Results can also aid the development of future visions and scenarios for MSP in the Atlantic region.

Beschreibung: "Für ein gutes Miteinander auf See“ ist eine Initiative am GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, die sich der Prävention von sexualisierter Belästigung, Diskriminierung und Gewalt (SBDG) auf deutschen Forschungsschiffen widmet. Geleitet wird die Initiative vom Gleichstellungsteam, das in der komplexen Organisationsstruktur der Forschungsschifffahrt viele Akteur*innen zusammenbringen muss, um die Maßnahmen passgenau zu entwickeln und zu etablieren. Auf Forschungsfahrten sind die Menschen für einen längeren Zeitraum auf engem Raum zusammen und können unerwünschten Situationen nicht ausweichen. Das Ziel der Initiative ist es, dafür eine Rettungsinsel zu bieten: Etablierte und klare Strukturen sollen Sicherheit geben und eine Klärung von unerwünschten Situationen ermöglichen. Dieser Beitrag gibt einen Einblick in die Vorgehensweise der Entwicklung der Initiative und erläutert, welche Herausforderungen Forschungsschiffe als Arbeitsort für eine SBDG-Initiative darstellen.

Beschreibung: A sense of kuleana (personal responsibility) in caring for the land and sea. An appreciation for laulima (many hands cooperating). An understanding of aloha 'āina (love of the land). The University of Hawai'i at Manoa hosted the 2023 Ecological Dissertations in Aquatic Sciences (Eco-DAS) program, which fostered each of these intentions by bringing together a team of early career aquatic ecologists for a week of networking and collaborative, interdisciplinary project development

Beschreibung: Gas chimneys and gas clouds in the subsurface media are known as one of the indications of possible petroleum reservoirs. Investigations of their properties are mostly initiated by seismic attribute interpretation on reflection seismic data. However, due to the complexity of their behavior and their difficult interpretation of seismic attributes, state-of-the-art methods are mostly required to be applied on the seismic data to prevent any misinterpretation. This is mostly done through attribute integration and multi-attribute analysis. This research presents a study on seismic attributes and integration on several 2D seismic reflection lines from the Gorgan Plain. It is located in Northeast Iran, on the western border of the region’s well-known Kopeh-Dagh fold and thrust belt, and southeastern border of the South Caspian Basin. Hydrocarbon systems of the Gorgan Plain are poorly known and have not been widely studied, but according to preliminary investigations, this region has the potential for hydrocarbon occurrences. The aim of this study is to investigate presence and then delaminate the affected area of possible gas chimneys that are related to possible hydrocarbon reservoirs. Gas chimneys are assumed to be created due to the routes, mostly made by faults, that provoke light hydrocarbons components to migrate toward the surface. Preliminary interpretations of seismic reflection data in this study revealed that at least two gas chimneys occurred within the Gorgan Plain. As it was mentioned, since they are mostly due to the faulting above the hydrocarbon reservoir, gas chimney and heavy faulting might exhibit the same effects on the seismic data and then on its attributes, which are amplitude reduction and high damping on energies, distortion of the waveshape and seismic velocity reduction. Thus, care should be taken in separation of these two different geologic phenomena on seismic attributes. This also was done in this study through utilized integration of the most relevant seismic attributes such as Instantaneous-phase, Chaos, Variance and Remove-bias attributes. Based on the result of interpretations and according to the evolution of the basin and its structural reconstruction on other studies, gas chimneys of the Gorgan Plain, are in relation to the operation of fault zones in Cenozoic erathem in the region. These fault zones which cut the entire Cenozoic erathem, create the pathway for vertical migration of hydrocarbons through Cheleken formation (reservoir rock) and its overburden sedimentary sequences. In other words, operation of fault zones within Cenozoic sedimentary sequence, is the main reason for gas seepage in the Gorgan Plain, which is also shown in seismic data.

Beschreibung: Dieses Kapitel behandelt die visuelle Navigation von autonomen Unterwasserfahrzeugen (AUVs) mit und ohne gegebene Karte, wobei Letzteres als Simultane Lokalisierung und Kartierung (SLAM) bezeichnet wird. Wir fassen die Herausforderungen und Möglichkeiten in Unterwasserumgebungen zusammen, die die visuelle Navigation von der Landnavigation unterscheiden, und geben auch einen kurzen Überblick über den aktuellen Stand der Technik in diesem Bereich. Dann argumentieren wir als Positionspapier, warum viele dieser Herausforderungen durch eine angemessene Modellierung von Unsicherheiten in der SLAM-Darstellung bewältigt werden könnten. Dies würde insbesondere dem SLAM-Algorithmus ermöglichen, die Mehrdeutigkeit zwischen „Ich sehe das gleiche Merkmal wieder“, „Ich sehe ein anderes, aber ähnlich aussehendes Merkmal“ und „Die Umgebung hat sich verändert und das Merkmal hat sich bewegt“ gründlich zu behandeln.

Beschreibung: Communities and their functioning are jointly shaped by ecological and evolutionary processes that manifest in diversity shifts of their component species and genotypes. How both processes contribute to community functional change over time is rarely studied. We here repeatedly quantified eco-evolutionary contributions to CO2-driven total abundance and mean cell size changes after short-, mid-, and longer-term (80, 168, and 〉 168 d, respectively) in experimental phytoplankton communities. While the CO2-driven changes in total abundance and mean size in the short- and mid-term could be predominantly attributed to ecological shifts, the relative contribution of evolution increased. Over the longer-term, the CO2-effect and underlying eco-evolutionary changes disappeared, while total abundance increased, and mean size decreased significantly independently of CO2. The latter could be presumably attributed to CO2-independent genotype selection which fed back to species composition. In conclusion, ecological changes largely dominated the regulation of environmentally driven phytoplankton functional shifts at first. However, evolutionary changes gained importance with time, and can ultimately feedback on species composition, and thus must be considered when predicting phytoplankton change.