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  • American Geophysical Union  (5,217)
  • Nature Publishing Group
  • 2020-2024
  • 2005-2009  (5,232)
  • 1960-1964
  • 2009  (5,232)
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  • 2020-2024
  • 2005-2009  (5,232)
  • 1960-1964
Year
  • 1
    Publication Date: 2022-05-25
    Description: This paper is not subject to U.S. copyright. The definitive version was published in Journal of Geophysical Research 114 (2009): F04019, doi:10.1029/2008JF001191.
    Description: Hindcasting decadal-timescale bathymetric change in estuaries is prone to error due to limited data for initial conditions, boundary forcing, and calibration; computational limitations further hinder efforts. We developed and calibrated a tidal-timescale model to bathymetric change in Suisun Bay, California, over the 1867–1887 period. A general, multiple-timescale calibration ensured robustness over all timescales; two input reduction methods, the morphological hydrograph and the morphological acceleration factor, were applied at the decadal timescale. The model was calibrated to net bathymetric change in the entire basin; average error for bathymetric change over individual depth ranges was 37%. On a model cell-by-cell basis, performance for spatial amplitude correlation was poor over the majority of the domain, though spatial phase correlation was better, with 61% of the domain correctly indicated as erosional or depositional. Poor agreement was likely caused by the specification of initial bed composition, which was unknown during the 1867–1887 period. Cross-sectional bathymetric change between channels and flats, driven primarily by wind wave resuspension, was modeled with higher skill than longitudinal change, which is driven in part by gravitational circulation. The accelerated response of depth may have prevented gravitational circulation from being represented properly. As performance criteria became more stringent in a spatial sense, the error of the model increased. While these methods are useful for estimating basin-scale sedimentation changes, they may not be suitable for predicting specific locations of erosion or deposition. They do, however, provide a foundation for realistic estuarine geomorphic modeling applications.
    Description: This study was supported by the U.S. Geological Survey’s Priority Ecosystems Science program, CALFED Bay/Delta Program, and the University of California Center for Water Resources. Use of ROMS and the CSTMS was supported by the U.S. Geological Survey, with assistance from John Warner.
    Keywords: Estuarine geomorphology ; Numerical modeling ; Sediment transport
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 2
    Publication Date: 2021-07-14
    Description: A major step in the "Wilson Cycle" is the splitting of a continent and the birth of a new ocean, with the consequent formation of passive plate margins. The transition from a continental to an oceanic rift can be observed today nowhere better than in the Red Sea/Gulf of Aden system. We have carried out during several years a number of expeditions in the axial portion of the Northern Red Sea, in the region where the northernmost nuclei of axial emplacement of oceanic crust can be observed. High resolution multibeam, magnetics, gravity and multichannel seismic reflection surveys from the Thetis Deep revealed rates and modes of initial pulses of sea floor spreading, velocity of S to N axial propagation of the oceanic rift, evolution of initial MORB-type crust and nature of the mantle thermal anomaly that caused the transition from a continental to an oceanic rift. The Thetis deep is made of three en echelon fault-bounded axial basins that are joined together with axial volcanic ridges and a large number of scattered small central volcanoes. The southern basin shows a strong linear magnetic anomaly corresponding to the axial neo-volcanic zone. Two negative symmetric anomalies identified as Matuyama are present in the southernmost part of this basin, suggesting that the emplacement of oceanic crust at this site started roughly 2.5 Ma, with an average half spreading rate of 6 mm/yr. The central sub-basin is also characterized by a strongly magnetic linear neo- volcanic zone that, however, is flanked only by a small, "vanishing" symmetrical negative anomaly suggesting emplacement of oceanic crust not earlier than about 1 Ma. The northern sub-basin does not show a clearly defined linear neo-volcanic zone although it displays a strong central magnetization suggesting initial emplacement of oceanic crust 〈 0.7 Ma. This pattern implies a south to north time progression of the initial emplacement of oceanic crust within the Thetis system, with a propagation rate of about 20 mm/yr. Gravity data inversions constrained by seismic data reveal that the oceanic crust extends from the axial neo-volcanic ridges toward the master faults of the axial depression with crustal thickness ranging from 4 to 6 km. The increasing thickness of basaltic crust toward the edges of the basin together with higher degree of melting, inferred by the geochemistry of the basaltic glasses, and higher central magnetization of the northernmost and youngest basin suggest a pulse of faster spreading rate at the onset of sea-floor spreading.
    Description: Published
    Description: San Francisco
    Description: 3.3. Geodinamica e struttura dell'interno della Terra
    Description: open
    Keywords: Spatial variations attributed to seafloor spreading ; Oceanic crust ; Seafloor morphology, geology, and geophysics ; Mid-ocean ridges ; 04. Solid Earth::04.01. Earth Interior::04.01.02. Geological and geophysical evidences of deep processes ; 04. Solid Earth::04.01. Earth Interior::04.01.03. Mantle and Core dynamics ; 04. Solid Earth::04.02. Exploration geophysics::04.02.04. Magnetic and electrical methods
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: Oral presentation
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  • 3
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    Nature Publishing Group
    In:  The ISME Journal, 3 (1). pp. 4-12.
    Publication Date: 2019-09-24
    Description: Our understanding of the composition and activities of microbial communities from diverse habitats on our planet has improved enormously during the past decade, spurred on largely by advances in molecular biology. Much of this research has focused on the bacteria, and to a lesser extent on the archaea and viruses, because of the relative ease with which these assemblages can be analyzed and studied genetically. In contrast, single-celled, eukaryotic microbes (the protists) have received much less attention, to the point where one might question if they have somehow been demoted from the position of environmentally important taxa. In this paper, we draw attention to this situation and explore several possible (some admittedly lighthearted) explanations for why these remarkable and diverse microbes have remained largely overlooked in the present era of the microbe. © 2009 International Society for Microbial Ecology All rights reserved.
    Type: Article , PeerReviewed
    Format: text
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  • 4
    Publication Date: 2019-09-23
    Description: Piceamycin, a new macrolactam polyketide antibiotic, was detected by HPLC-diode array screening in extracts of Streptomyces sp. GB 4-2, which was isolated from the mycorrhizosphere of Norway spruce. The structure of piceamycin was determined by mass spectrometry and NMR experiments. It showed inhibitory activity against Gram-positive bacteria, selected human tumor cell lines and protein tyrosine phosphatase 1B. The Journal of Antibiotics (2009) 62, 513-518; doi:10.1038/ja.2009.64; published online 17 July 2009
    Type: Article , PeerReviewed
    Format: text
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  • 5
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    Nature Publishing Group
    In:  Nature Geoscience, 2 (4). pp. 243-244.
    Publication Date: 2019-09-23
    Description: The enhanced Arctic warming over the past three decades is attracting much attention. Combining forward and inverse models with observations suggests that regional changes in aerosol concentrations have contributed significantly.
    Type: Article , PeerReviewed
    Format: text
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  • 6
    Publication Date: 2019-09-23
    Description: The transport of warm and salty Indian Ocean waters into the Atlantic Ocean—the Agulhas leakage—has a crucial role in the global oceanic circulation1 and thus the evolution of future climate. At present these waters provide the main source of heat and salt for the surface branch of the Atlantic meridional overturning circulation (MOC)2. There is evidence from past glacial-to-interglacial variations in foraminiferal assemblages3 and model studies4 that the amount of Agulhas leakage and its corresponding effect on the MOC has been subject to substantial change, potentially linked to latitudinal shifts in the Southern Hemisphere westerlies5. A progressive poleward migration of the westerlies has been observed during the past two to three decades and linked to anthropogenic forcing6, but because of the sparse observational records it has not been possible to determine whether there has been a concomitant response of Agulhas leakage. Here we present the results of a high-resolution ocean general circulation model7, 8 to show that the transport of Indian Ocean waters into the South Atlantic via the Agulhas leakage has increased during the past decades in response to the change in wind forcing. The increased leakage has contributed to the observed salinification9 of South Atlantic thermocline waters. Both model and historic measurements off South America suggest that the additional Indian Ocean waters have begun to invade the North Atlantic, with potential implications for the future evolution of the MOC.
    Type: Article , PeerReviewed
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  • 7
    Publication Date: 2019-09-23
    Type: Article , PeerReviewed
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  • 8
    Publication Date: 2019-09-23
    Description: The tectonically driven closure of tropical seaways during the Pliocene epoch (approx5–2 million years (Myr) ago) altered ocean circulation and affected the evolution of climate. Plate tectonic reconstructions show that the main reorganization of one such seaway, the Indonesian Gateway, occurred between 4 and 3 Myr ago. Model simulations have suggested that this would have triggered a switch in the source of waters feeding the Indonesian throughflow into the Indian Ocean, from the warm salty waters of the South Pacific Ocean to the cool and relatively fresh waters of the North Pacific Ocean. Here we use paired measurements of the delta18O and Mg/Ca ratios of planktonic foraminifera to reconstruct the thermal structure of the eastern tropical Indian Ocean from 5.5 to 2 Myr ago. We find that sea surface conditions remained relatively stable throughout the interval, whereas subsurface waters freshened and cooled by about 4 °C between 3.5 and 2.95 Myr ago. We suggest that the restriction of the Indonesian Gateway led to the cooling and shoaling of the thermocline in the tropical Indian Ocean. We conclude that this tectonic reorganization contributed to the global shoaling of the thermocline recorded during the Pliocene epoch, possibly contributing to the development of the equatorial eastern Pacific cold tongue.
    Type: Article , PeerReviewed
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  • 9
    Publication Date: 2019-09-23
    Description: Caboxamycin, a new benzoxazole antibiotic, was detected by HPLC-diode array screening in extracts of the marine strain Streptomyces sp. NTK 937, which was isolated from deep-sea sediment collected in the Canary Basin. The structure of caboxamycin was determined by mass spectrometry, NMR experiments and X-ray analysis. It showed inhibitory activity against Gram-positive bacteria, selected human tumor cell lines and the enzyme phosphodiesterase.
    Type: Article , PeerReviewed
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  • 10
    Publication Date: 2019-09-23
    Description: Gombapyrones A–D, new members of the α-pyrone family of secondary metabolites, were produced by Streptomyces griseoruber Acta 3662, which was isolated from bamboo tree rhizosphere. The strain was characterized by its morphological and chemotaxonomical features and by 16S rDNA sequencing as S. griseobuber. The gombapyrone structures were determined by mass spectrometry and by NMR experiments, and were found to have an inhibitory activity against protein tyrosine phosphatase 1B and glycogen synthase kinase 3β.
    Type: Article , PeerReviewed
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