ALBERT

Description: The two small research catchments Obere Brachtpe (2.6 km2; 50.989986, 7.752013) and Bohlmicke (1 km2, 51.079319, 7.892988) are located in the Rhenish Massif, a low mountain range in Germany. Land use in both catchments is dominated by pasture land, spruce stands and mixed forests. Mean annual temperature is 9.1°C, and mean annual total precipitation is 1250 mm, with 15%–20% of the annual precipitation falling as snow. The geology is characterized by sandy silty clay shale from the Lower and Middle Devonian. Loamy Cambisols derived from periglacial slope deposits, complemented by Leptosols and Stagnosols, are the most prominent soils in the catchments. Long‐term hydrological datasets of precipitation, throughfall, discharge, groundwater levels and soil moisture (at different soil depths) in a high temporal and spatial resolution are available for further scientific analysis. Both catchments were monitored within the time period 1999 and 2009, in order to understand how the antecedent soil moisture, stratified soils (periglacial cover beds) and topography (slope form) impacted the subsurface connectivity, and the subsurface stormflow generation ‐ a dominant runoff generation process in humid mountainous catchments. Detailed physically based investigations on runoff processes were carried out, and the obtained results helped to better understand subsurface stormflow generation and subsurface connectivity dynamics. The process knowledge gained, which was presented at several conferences, as well as publications, was the basis for the discussion of open questions within the scientific network ‘Subsurface Stormflow ‐ A well‐recognized, but still challenging process in Catchment Hydrology’ (2016–2021), and the research unit ‘Fast and invisible: conquering subsurface stormflow through an interdisciplinary multisite approach’ (2022–2025), both financed by the German Research Foundation (DFG).

Description: Long‐term hydrological datasets of precipitation, throughfall, discharge, groundwater levels and soil moisture (at different soil depths) in a high temporal and spatial resolution are available of the two small catchments Obere Brachtpe (2.6 km²) and Bohlmicke (1 km²) (Germany). Both catchments have been monitored in order to understand how the antecedent soil moisture, stratified soils (periglacial cover beds) and topography (slope form) impacted the subsurface connectivity and the subsurface stormflow generation in humid mountainous catchments.

Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659

Description: Statistical and climate models are frequently used for biodiversity projections under future climatic changes, but their predictive capacity for freshwater plankton may vary among different species and community metrics. Here, we used random forests to model plankton species and community metrics as a function of biological, climatic, physical, and chemical data from long‐term (2000–2017) monitoring data collected from Lake Müggelsee Berlin, Germany. We (1) compared the predictability of well‐known lake plankton metric types (biomass, abundance, taxonomic diversity, Shannon diversity, Simpson diversity, evenness, taxonomic distinctness, and taxonomic richness) and (2) assessed how the relative influence of different environmental drivers varies across lake plankton metric models. Overall, the metric predictability was highest for biomass and abundance followed by taxonomic richness. The biomass of dominant phytoplankton taxonomic groups such as cyanobacteria (adjusted‐R2 = 0.53) and the abundance of dominant zooplankton taxonomic groups such as rotifers (adjusted‐R2 = 0.59) and daphnids (adjusted‐R2 = 0.51) were more predictable than other metric types. The plankton metric predictability increased when grouping phytoplankton species according to their functional traits (adjusted‐R2 = 0.37 ± 0.14, mean ± SD, n = 36 functional groups) compared to higher taxonomic units (adjusted‐R2 = 0.25 ± 0.15, n = 22 taxonomic groups). Light, nutrients, water temperature, and seasonality for phytoplankton and food resources for zooplankton were the main drivers of both taxonomic and functional groups, giving confidence that our models captured the expected major environmental drivers. Our quantitative analyses highlight the multidimensionality of lake planktonic responses to environmental drivers and have implications for our capacity to select appropriate metrics for forecasting the future of lake ecosystems under global change scenarios.

Description: European Union's Horizon 2020 Research and Innovation Programme

Description: Belmont Forum

Description: BiodivERsA

Description: LimnoSCenES

Description: Many lake ecosystems that have been severely disturbed by eutrophication, have also experienced large human efforts to restore “natural” conditions. However, the trajectories and the extent of recovery of these lake ecosystems are still poorly understood. In many shallow lakes, recovery was often delayed and counter‐clockwise hysteretic. Here, we study recovery and ecosystem trajectories in a large and deep lake using diatom remains in sediment cores and time series of phosphorus concentrations. We identified four periods of diatom community change: slow change during early eutrophication, thereafter a short period of rapid change after the 1950s, followed by community stability from the 1960s to the mid‐1980s, and finally a recovery phase until 2010. Diatom community structure responded quickly and in a saturating way to increasing phosphorus concentrations, but also fast to phosphorus decline. Hence, diatom community dynamics did not show counter‐clockwise hysteresis but was characterized by a high degree of recovery and clock‐wise hysteresis (CWH). We suggest that CWH in response to eutrophication and recovery is a typical and previously overlooked feature of deep lakes, which results from a more rapid change of average nutrient concentrations and thus productivity in the epilimnion compared to average nutrient concentrations across the entire water column. Such nonlinear and hysteretic responses to changing nutrients need to be considered when analyzing the effects of other stressors such as climate warming on ecosystem dynamics to prevent erroneous attribution of ecosystem change to other stressors instead of nutrient change.

Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659

Description: European Regional Development Fund http://dx.doi.org/10.13039/501100008530

Description: In‐depth understanding of the potential implications of climate change is required to guide decision‐ and policy‐makers when developing adaptation strategies and designing infrastructure suitable for future conditions. Impact models that translate potential future climate conditions into variables of interest are needed to create the causal connection between a changing climate and its impact for different sectors. Recent surveys suggest that the primary strategy for validating such models (and hence for justifying their use) heavily relies on assessing the accuracy of model simulations by comparing them against historical observations. We argue that such a comparison is necessary and valuable, but not sufficient to achieve a comprehensive evaluation of climate change impact models. We believe that a complementary, largely observation‐independent, step of model evaluation is needed to ensure more transparency of model behavior and greater robustness of scenario‐based analyses. This step should address the following four questions: (1) Do modeled dominant process controls match our system perception? (2) Is my model's sensitivity to changing forcing as expected? (3) Do modeled decision levers show adequate influence? (4) Can we attribute uncertainty sources throughout the projection horizon? We believe that global sensitivity analysis, with its ability to investigate a model's response to joint variations of multiple inputs in a structured way, offers a coherent approach to address all four questions comprehensively. Such additional model evaluation would strengthen stakeholder confidence in model projections and, therefore, into the adaptation strategies derived with the help of impact models.

Description: A comprehensive evaluation of climate change impact models combining both observation‐based and response‐based strategies.

Description: This article is categorized under: Climate Models and Modeling 〉 Knowledge Generation with Models Assessing Impacts of Climate Change 〉 Evaluating Future Impacts of Climate Change

Description: Alexander von Humboldt‐Stiftung http://dx.doi.org/10.13039/100005156

Description: Engineering and Physical Sciences Research Council http://dx.doi.org/10.13039/501100000266

Description: Bacteria play a key role in sustaining the chemodiversity of marine dissolved organic matter (DOM), yet there is limited direct evidence of a major contribution of bacterial exometabolites to the DOM pool. This study tests whether molecular formulae of intact exometabolites can be detected in natural DOM via untargeted Fourier‐transform ion cyclotron resonance mass spectrometry (FT‐ICR‐MS). We analyzed a series of quantitative mixtures of solid‐phase extracted DOM from the deep ocean, of a natural microbial community and selected model strains of marine bacteria. Under standard instrument settings (200 broadband scans, mass range 92–1000 Da), 77% of molecular formulae were shared between the mesocosm and marine DOM. However, there was 〈 10% overlap between pure bacterial exometabolome with marine DOM, and in mixing ratios closest to mimicking natural environments (1% bacterial DOM, 99% marine DOM), only 4% of the unique bacterial exometabolites remained detectable. Further experiments with the bacterial exometabolome DOM mixtures using enhanced instrument settings resulted in increased detection of the exometabolites at low concentrations. At 1000 and 10,000 accumulated scans, 23% and 29% of the unique molecular formulae were detectable at low concentrations, respectively. Moreover, windowing a specific mass range encompassing a representative fraction of exometabolites tripled the number of unique detected formulae at low concentrations. Routine FT‐ICR‐MS settings are thus not always sufficient to distinguish bacterial exometabolome patterns from a seawater DOM background. To observe these patterns at higher sensitivity, we recommend a high scan number coupled with windowing a characteristic region of the molecular fingerprint.

Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659

Description: The latest version of the Soil and Water Assessment Tool (SWAT+) features several improvements compared with previous versions of the model, for example, the definition of landscape units that allow for a better representation of spatio‐temporal dynamics. To evaluate the new model capabilities in lowland catchments characterized by near‐surface groundwater tables and extensive tile drainage, we assess the performance of two SWAT+ model setups in comparison to a setup based on a previous SWAT model version (SWAT3S with a modified three groundwater storage model) in the Kielstau catchment in Northern Germany. The Kielstau catchment has an area of about 50 km2, is dominated by agricultural land use, and has been thoroughly monitored since 2005. In both SWAT+ setups, the catchment is divided into upland areas and floodplains, but in the first SWAT+ model setup, runoff from the hydrologic response units is summed up at landscape unit level and added directly to the stream. In the second SWAT+ model setup, runoff is routed across the landscape before it reaches the streams. Model results are compared with regard to (i) model performance for stream flow at the outlet of the catchment and (ii) aggregated as well as temporally and spatially distributed water balance components. All three model setups show a very good performance at the catchment outlet. In comparison to a previous version of the SWAT model that produced more groundwater flow, the SWAT+ model produced more tile drainage flow and surface runoff. Results from the new SWAT+ model confirm that the representation of routing processes from uplands to floodplains in the model further improved the representation of hydrological processes. Particularly, the stronger spatial heterogeneity that can be related to characteristics of the landscape, is very promising for a better understanding and model representation of hydrological fluxes in lowland areas. The outcomes of this study are expected to further prove the applicability of SWAT+ and provide useful information for future model development.

Description: The model performance of all three model setups was very good, but the SWAT+ model setup with runoff routing between landscape units performed best. Moreover, the SWAT+ model applications predicted a greater spatial heterogeneity of the water balance components. The representation of hydrological fluxes particularly with regard to groundwater flow, surface runoff, and tile drainage flow differed considerably between the SWAT and SWAT+ model setups.

Description: Pelagic bacteria can be classified into free‐living and particle‐attached life modes, which either dwell in the water column or attach to suspended particles. Bacteria with a generalist life style, however, can actively shift between these two habitats. Globally increasing densities of natural and artificial particles enhance habitat heterogeneity, with potential consequences for system stability and trophic transfer through aquatic food webs. To better decipher the dynamics of microbial communities, we investigated the influence of adaptive vs. fixed habitat choice on species coexistence for a simplified bacterial community by analyzing a corresponding food web model, consisting of two specialist bacterial prey species (free and attached), a generalist bacterial prey species with the ability to shift between both habitats, and two protist predators, specialized on either water or particle compartment. For simplicity we assume a shared resource pool, considering particles only for colonization but not as a source for nutrients or carbon, that is, inert particles like microplastics or inorganic sediments. The model predicts coexistence on a cyclic attractor between fixed and flexible bacteria, if the costs for adaptive habitat choice can be balanced by adaptation speed. The presence of adaptive prey dampens predator–prey cycle amplitudes, contributing to system stabilization resulting in higher mean predator biomass compared to specialist prey only. Thus, in pelagic microbial systems, flexible habitat choice at the prey level has important implications for system stability and magnitude of energy flow through the microbial loop.

Description: German Ministry of Education and Science

Description: German Science Foundation (DFG)

Description: Greenhouse gas fluxes (CO2, CH4, and N2O) from African streams and rivers are under‐represented in global datasets, resulting in uncertainties in their contributions to regional and global budgets. We conducted year‐long sampling of 59 sites in a nested‐catchment design in the Mara River, Kenya in which fluxes were quantified and their underlying controls assessed. We estimated annual basin‐scale greenhouse gas emissions from measured in‐stream gas concentrations, modeled gas transfer velocities, and determined the sensitivity of up‐scaling to discharge. Based on the total annual CO2‐equivalent emissions calculated from global warming potentials (GWP), the Mara basin was a net greenhouse gas source (294 ± 35 Gg CO2 eq yr−1). Lower‐order streams (1–3) contributed 81% of the total fluxes, and higher stream orders (4–8) contributed 19%. Cropland‐draining streams also exhibited higher fluxes compared to forested streams. Seasonality in stream discharge affected stream widths (and stream area) and gas exchange rates, strongly influencing the basin‐wide annual flux, which was 10 times higher during the high and medium discharge periods than the low discharge period. The basin‐wide estimate was underestimated by up to 36% if discharge was ignored, and up to 37% for lower stream orders. Future research should therefore include seasonality in stream surface areas in upscaling procedures to better constrain basin‐wide fluxes. Given that agricultural activities are a major factor increasing riverine greenhouse gas fluxes in the study region, increased conversion of forests and agricultural intensification has the possibility of increasing the contribution of the African continent to global greenhouse gas sources.

Description: Deutscher Akademischer Austauschdienst http://dx.doi.org/10.13039/501100001655

Description: IHE Delft Institute for Water Education

Description: Federal Ministry of Education and Research http://dx.doi.org/10.13039/501100002347

Description: Helmholtz Association http://dx.doi.org/10.13039/501100009318

Description: TERENO Bavarian Alps/ Pre‐Alps Observatory

Description: How will the theories and practices of democracy fare in a climate changing world? Are conventional democratic institutions ultimately doomed or are they able to become more responsive to a changing climate? Is there a need to reimagine democracy and how might it be reimagined? This article reviews the different responses to these questions by distinguishing between three “political imaginaries” in which the relationship between climate change and democracy takes distinct forms. I start by showing how the concept of “political imaginaries” can facilitate the comparison of the different ways in which the relation between democracy and climate change is constructed, before reviewing three such imaginaries. The skeptical imaginary, found in the “eco‐authoritarianism” of the 1970s that is echoed by much sociopolitical analysis today, casts doubt on the possibilities of democratic mechanisms to respond adequately and swiftly to the problem of climate change. Those who resist such skepticism often defend democracy by arguing that institutions and processes of democracy can be made more “ecologically rational”—the rational imaginary of climate democracy involves improvements in political representation and participation. Finally, I present the alternative radical democratic imaginary, in which the crisis of climate change provides a moment for the rupture of existing sociopolitical structures and the formation of alternatives. The article concludes that although none of these imaginaries is able to capture the entirety of climate change politics around the world, the radical democratic imaginary is responsive to the inevitable and valuable plurality around the issue of climate change. This article is categorized under: Climate, Nature, and Ethics 〉 Ethics and Climate Change Policy and Governance 〉 Multilevel and Transnational Climate Change Governance

Description: Climate protests may mobilise new political subjects.

Description: In recent years, the issue of high groundwater levels has caught attention. Unfavorable consequences of high groundwater levels are especially damage to buildings, infrastructure, and the environment. Processes that lead to high groundwater levels are hydrological (heavy or extended rainfall and flood events), or anthropogenic (reduced groundwater extractions, interaction with sewer networks, hydraulic engineering measures, structural interventions in the water balance, and mining activities). Several different map products have been prepared for the information of inhabitants and for planning purposes, and also methods for damage and risk analysis related to high groundwater levels have been developed. Groundwater management measures and structural measures are available to reduce the risk related to high groundwater levels. An operational management system could be combined from existing components, but operational forecasting systems for high groundwater levels are—different to flood forecasting systems—not yet common practice. A better understanding of the processes and the development of integrated approaches for modeling, design, planning, forecasting, and warning, as well as improvement of interdisciplinary collaboration between different organizations, are recommendations for the future. This article is categorized under: Engineering Water 〉 Engineering Water Water and Life 〉 Conservation, Management, and Awareness Science of Water 〉 Hydrological Processes Science of Water 〉 Water Extremes

Description: Pumping water from a basement during the Neiße flood 2010 in Saxony. The clear water indicates that the basement flooding originates from groundwater (photo: Reinhard Schinke).

Description: The Ghohroud granitoids (GG), containing mafic microgranular enclaves (MMEs) are located in the central part of the Urumieh‐Dokhtar Magmatic Arc (UDMA) in central Iran. They are associated with the subduction‐related magmatism in the Alpine‐Himalayan orogenic belt. The GG are comprised of a variety of intermediate and felsic rocks, including tonalite, granodiorite, granite, diorite porphyry and monzodiorite. The MMEs are gabbroic diorite and tonalite in composition and characterized by a fine‐grained hypidiomorphic microgranular texture with occasional chilled margins. They show rounded, sharp or irregular contact with the host granitoids. The occurrences of quartz, K‐feldspar and corroded plagioclase indicate that MMEs are the products of mixing between mantle and crust‐derived magmas. New ages of zircon U–Pb dating reveal that the GG in the Kashan area emplaced at ca. 19–17 Ma (Burdigalian). All the samples of MMEs and granitoid host rocks in this study are metaluminous and calc‐alkaline with I‐type affinities. They are enriched in light rare earth elements (LREEs) and show slight negative Eu anomalies (Eu/Eu* = 0.36–0.95). These features in a combination with the relative depletion in Nb, Ta, Ti and P, indicate the granitoids and MMEs are closely associated with subduction‐related magmas at an active continental margin. The host rocks yield relatively homogeneous isotopic compositions of initial 87Sr/86Sr ratios ranging from 0.706036 to 0.707055, εNd(t) values varying from −2.25 to 0.8, and the Nd model ages (TDM) vary in a limited range of 0.70–0.96 Ga. The MMEs show similar initial 87Sr/86Sr ratios (0.706420–0.707366), εNd(t) values (−1.32 to −0.27), TDM (0.68–1.09 Ga) and Pb isotopic compositions with host granitoids, which imply they attained isotopic equilibration during magma mingling and mixing. In combination with the petrographic, chemical and isotopic results, we suggest that the origin of MMEs and their host rocks were related to the interaction between crust‐derived melts and mantle‐derived mafic magmas. The magma‐mixing event possibly occurred during the transition from subduction to collision in the UDMA along with the closure of the Neotethyan ocean.

Description: A comprehensive dataset from petrographic characteristics to geochemical compositions of the mafic microgranular enclaves and granitoid host rocks from the Urumieh–Dokhtar Magmatic Arc (Iran) was presented. The new data provide significant insight into the evolution of magmatism in this area, which was tightly related to the Neotethyan closure. image

Description: National Nature Science Foundation of China

Description: TMU Research Grant Council

Description: Arctic and alpine aquatic ecosystems are changing rapidly under recent global warming, threatening water resources by diminishing trophic status and changing biotic composition. Macrophytes play a key role in the ecology of freshwaters and we need to improve our understanding of long‐term macrophytes diversity and environmental change so far limited by the sporadic presence of macrofossils in sediments. In our study, we applied metabarcoding using the trnL P6 loop marker to retrieve macrophyte richness and composition from 179 surface‐sediment samples from arctic Siberian and alpine Chinese lakes and three representative lake cores. The surface‐sediment dataset suggests that macrophyte richness and composition are mostly affected by temperature and conductivity, with highest richness when mean July temperatures are higher than 12°C and conductivity ranges between 40 and 400 μS cm−1. Compositional turnover during the Late Pleistocene/Holocene is minor in Siberian cores and characterized by a less rich, but stable emergent macrophyte community. Richness decreases during the Last Glacial Maximum and rises during wetter and warmer climate in the Late‐glacial and Mid‐Holocene. In contrast, we detect a pronounced change from emergent to submerged taxa at 14 ka in the Tibetan alpine core, which can be explained by increasing temperature and conductivity due to glacial runoff and evaporation. Our study provides evidence for the suitability of the trnL marker to recover modern and past macrophyte diversity and its applicability for the response of macrophyte diversity to lake‐hydrochemical and climate variability predicting contrasting macrophyte changes in arctic and alpine lakes under intensified warming and human impact.

Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659

Description: National Natural Science Foundation of China http://dx.doi.org/10.13039/501100001809

Description: Second Tibetan Plateau Scientific Expedition and Research Program

Description: https://doi.pangaea.de/10.1594/PANGAEA.920866

Description: https://doi.org/10.5061/dryad.k6djh9w4r

Description: Urban green space is increasingly viewed as essential infrastructure to build resilience to climate change by retaining water in the city landscape and balancing ecohydrological partitioning into evapotranspiration for cooling and groundwater recharge. Quantifying how different vegetation types affect water partitioning is essential for future management, but paucity of data and the complex heterogeneity of urban areas make water balance estimates challenging. Here, we provide a preliminary assessment of water partitioning from different sized patches of trees and grass as well as from sealed surfaces. To do this, we used limited field observations together with an advanced, process‐based tracer‐aided ecohydrological model at a meso‐scale (5 km2) in central Berlin, Germany. Transpiration was the dominant green water flux accounting for over 50% of evapotranspiration in the modelled area. Green water fluxes were in general greater from trees compared with grass, but grass in large parks transpired more water compared with grass in small parks that were intensively used for recreation. Interception evaporation was larger for trees compared with grass, but soil water evaporation was greater for grass compared with trees. We also show that evapotranspiration from tree‐covered areas comprise almost 80% of the total evapotranspiration from the whole model domain while making up less than 30% of the surface cover. The results form an important stepping‐stone towards further upscaling over larger areas and highlights the importance of continuous high‐resolution hydrological measurements in the urban landscape, as well as the need for improvements to ecohydrological models to capture important urban processes.

Description: Berlin University Alliance / Einstein Stiftung Berlin, Climate and Water under Change

Description: Deutsche Forschungsgemeinschaft http://dx.doi.org/10.13039/501100001659

Description: Einstein Stiftung Berlin http://dx.doi.org/10.13039/501100006188

Description: Leverhulme Trust http://dx.doi.org/10.13039/501100000275

Description: Urban Climate Observatory (UCO) Berlin

Description: Iron flocculants play a major role in the remediation of water bodies, removing particulate pollutants such as microplastics through floc formation. Such flocs are prone to microbial iron reduction while lying on top of anoxic sediments, which possibly leads the release of bound microplastics. In this study, Shewanella oneidensis was employed to simulate the impact of microbial iron reduction on the release of polyethylene spheres from sunken flocs in 120 d batch experiments. Most of the flocs iron (oxyhydr)oxides were reduced (70–90%), but this did not affect their integrity. Only a negligible proportion (0.2–2.7%) of polyethylene spheres was released, while the majority remained bound inside the floc matrix. This study exemplifies that flocs are quite stable, even when experiencing microbial iron reduction under anoxic conditions. Thereby incorporation into such aggregates may display a potential mode of long‐term microplastics storage in freshwater sediments.

Description: Bundesministerium für Bildung und Forschung http://dx.doi.org/10.13039/501100002347

Description: https://doi.org/10.48758/ufz.11330

Description: The fluorophore [2‐(4‐pyridyl)‐5{[4‐dimethylaminoethyl‐aminocarbamoyl‐methoxy]phenyl}oxazole], in short PDMPO, is incorporated in newly polymerized silica in diatom frustules and thereby provides a tool to estimate Si uptake, study diatom cell cycles but also determine mortality‐independent abundance‐based species specific‐growth rates in cultures and natural assemblages. In this study, the theoretical framework and applicability of the PDMPO staining technique to estimate diatom species specific‐growth rates were investigated. Three common polar diatom species, Pseudo‐nitzschia subcurvata, Chaetoceros simplex, and Thalassiosira sp., chosen in order to cover a broad range of species specific frustule and life‐cycle characteristics, were incubated over 24 h in control (no PDMPO) and with 0.125 and 0.6 μM PDMPO addition, respectively. Results indicate that specific‐growth rates of the species tested were not affected in both treatments with PDMPO addition. The specific‐growth rate estimates based on the PDMPO staining patterns (μPDMPO) were comparable and more robust than growth rates estimated from the changes in cell concentrations (μcc). This technique also allowed to investigate and highlight the importance of the illumination cycle (light and dark phases) on cell division in diatoms.

Description: The pelagic ecosystem of the Arctic Ocean is threatened by severe changes such as the reduction in sea‐ice coverage and increased inflow of warmer Atlantic water. The latter is already altering the zooplankton community, highlighting the need for monitoring studies. It is therefore essential to accelerate the taxonomic identification to speed up sample analysis, and to expand the analysis to biomass and size assessments, providing data for modeling efforts. Our case study in Fram Strait illustrates that image‐based analyses with the ZooScan provide abundance data and taxonomic resolutions that are comparable to microscopic analyses and are suitable for zooplankton monitoring purposes in the Arctic. We also show that image analysis allows to differentiate developmental stages of the key species Calanus spp. and Metridia longa and, thus, to study their population dynamics. Our results emphasize that older preserved samples can be successfully reanalyzed with ZooScan. To explore the applicability of image parameters for calculating total mesozooplankton and Calanus spp. biomasses, we used (1) conversion factors (CFs) translating wet mass to dry mass (DM), and (2) length–mass (LM) relationships. For Calanus spp., the calculated biomass values yielded similar results as direct DM measurements. Total mesozooplankton biomass ranged between 1.6 and 15 (LM) or 2.4 and 21 (CF) g DM m², respectively, which corresponds to previous studies in Fram Strait. Ultimately, a normalized biomass size spectra analysis provides 1st insights into the mesozooplankton size structure at different depths, revealing steep slopes in the linear fit in communities influenced by Atlantic water inflow.

Description: Bundesministerium für Bildung und Forschung http://dx.doi.org/10.13039/501100002347

Description: The current geochronological state of the art for applying the radiocarbon (14C) method to deep-sea sediment archives lacks key information on sediment bioturbation. Here, we apply a sediment accumulation model that simulates the sedimentation and bioturbation of millions of foraminifera, whereby realistic 14C activities (i.e. from a 14C calibration curve) are assigned to each single foraminifera based on its simulation time step. We find that the normal distribution of 14C age typically used to represent discrete-depth sediment intervals (based on the reported laboratory 14C age and measurement error) is unlikely to be a faithful reflection of the actual 14C age distribution for a specific depth interval. We also find that this deviation from the actual 14C age distribution is greatly amplified during the calibration process. Specifically, we find a systematic underestimation of total geochronological error in many cases (by up to thousands of years), as well as the generation of age–depth artefacts in downcore calibrated median age. Even in the case of “perfect” simulated sediment archive scenarios, whereby sediment accumulation rate (SAR), bioturbation depth, reservoir age and species abundance are all kept constant, the 14C measurement and calibration processes generate temporally dynamic median age–depth artefacts on the order of hundreds of years – whereby even high SAR scenarios (40 and 60 cm kyr−1) are susceptible. Such age–depth artefacts can be especially pronounced during periods corresponding to dynamic changes in the Earth's Δ14C history, when single foraminifera of varying 14C activity can be incorporated into single discrete-depth sediment intervals. For certain lower-SAR scenarios, we find that downcore discrete-depth true median age can systematically fall outside the calibrated age range predicted by the 14C measurement and calibration processes, thus leading to systematically inaccurate age estimations. In short, our findings suggest the possibility of 14C-derived age–depth artefacts in the literature. Furthermore, since such age–depth artefacts are likely to coincide with large-scale changes in global Δ14C, which themselves can coincide with large-scale changes in global climate (such as the last deglaciation), 14C-derived age–depth artefacts may have been previously incorrectly attributed to changes in SAR coinciding with global climate. Our study highlights the need for the development of improved deep-sea sediment 14C calibration techniques that include an a priori representation of bioturbation for multi-specimen samples.

Description: Geological records show that vast proglacial lakes existed along the land terminating margins of palaeo ice sheets in Europe and North America. Proglacial lakes impact ice sheet dynamics by imposing marine-like boundary conditions at the ice margin. These lacustrine boundary conditions include changes in the ice sheet’s geometry, stress balance and frontal ablation and therefore affect the entire ice sheet’s mass balance. This interaction, however, has not been rigorously implemented in ice sheet models. In this study, the implementation of an adaptive lake boundary into the Parallel Ice Sheet Model (PISM) is described and applied to the glacial retreat of the Laurentide Ice Sheet (LIS). The results show that the presence of proglacial lakes locally enhances the ice flow. Along the continental ice margin, ice streams and ice lobes can be observed. Lacustrine terminating ice streams cause immense thinning of the ice sheet’s interior and thus play a significant role in the demise of the LIS. Due to the presence of lakes, a process similar to the marine ice sheet instability causes the collapse of the ice saddle over Hudson Bay, which blocked drainage via the Hudson Strait. In control experiments without a lake model, Hudson Bay is still glaciated at the end of the simulation. Future studies should target the development of parametrizations that better describe the glacial-lacustrine interactions.

Description: Nitrogen fixers, or diazotrophs, play a key role in the carbon and nitrogen cycle of the world oceans, but the controlling mechanisms are not comprehensively understood yet. The present study compares two paradigms on the ecological niche of diazotrophs in an Earth System Model (ESM). In our standard model configuration, which is representative for most of the state-of-the-art pelagic ecosystem models, diazotrophs take advantage of zooplankton featuring a lower food preference for diazotrophs than for ordinary phytoplankton. We compare this paradigm with the idea that diazotrophs are more competitive under oligotrophic conditions, characterized by low (dissolved, particulate, organic and inorganic) phosphorous availability. Both paradigms are supported by observational evidence and lead to a similar good agreement to the most recent and advanced observation-based nitrogen fixation estimate in our ESM framework. Further, we illustrate that the similarity between the two paradigms breaks in a RCP 8.5 anthropogenic emission scenario. We conclude that a more advanced understanding of the ecological niche of diazotrophs is mandatory for assessing the cycling of essential nutrients, especially under changing environmental conditions. Our results call for more in-situ measurements of cyanobacteria biomass if major controls of nitrogen fixation in the oceans are to be dissected.

Description: Cold-water coral ecosystems are considered hot-spots of biodiversity and biomass production and may be a regionally important contributor to carbonate production. The impact of these ecosystems on biogeochemical processes and carbonate preservation in associated sediments were studied at Røst Reef and Traenadjupet Reef, two modern (post-glacial) cold-water coral reefs on the Mid-Norwegian shelf. Sulfate and iron reduction as well as carbonate dissolution and precipitation were investigated by combining pore-water geochemical profiles, steady state modeling, as well as solid phase analyses and sulfate reduction rate measurements on gravity cores of up to 3.25 m length. Low extents of sulfate depletion and dissolved inorganic carbon (DIC) production, combined with sulfate reduction rates not exceeding 3 nmol S cm−3 d−1, suggested that overall anaerobic carbon mineralization in the sediments was low. These data showed that the coral fragment-bearing siliciclastic sediments were effectively decoupled from the productive pelagic ecosystem by the complex reef surface framework. Organic matter being mineralized by sulfate reduction was calculated to consist of 57% carbon bound in CH2O groups and 43% carbon in -CH2- groups. Methane concentrations were below 1 μM, and failed to support the hypothesis of a linkage between the distribution of cold-water coral reefs and the presence of hydrocarbon seepage. Reductive iron oxide dissolution linked to microbial sulfate reduction buffered the pore-water carbonate system and inhibited acid-driven coral skeleton dissolution. A large pool of reactive iron was available leading to the formation of iron sulfide minerals. Constant pore-water Ca2+, Mg2+ and Sr2+ concentrations in most cores and decreasing Ca2+ and Sr2+ concentrations with depth in core 23–18 GC indicated diagenetic carbonate precipitation. This was consistent with the excellent preservation of buried coral fragments.

Description: The late stage of the North East Atlantic (NEA) spring bloom was investigated during June 2005 along a transect section from 45 to 66° N between 15 and 20° W in order to characterize the contribution of siliceous and calcareous phytoplankton groups and describe their distribution in relation to environmental factors. We measured several biogeochemical parameters such as nutrients, surface trace metals, algal pigments, biogenic silica (BSi), particulate inorganic carbon (PIC) or calcium carbonate, particulate organic carbon, nitrogen and phosphorus (POC, PON and POP, respectively), as well as transparent exopolymer particles (TEP). Results were compared with other studies undertaken in this area since the JGOFS NABE program. Characteristics of the spring bloom generally agreed well with the accepted scenario for the development of the autotrophic community. The NEA seasonal diatom bloom was in the late stages when we sampled the area and diatoms were constrained to the northern part of our transect, over the Icelandic Basin (IB) and Icelandic Shelf (IS). Coccolithophores dominated the phytoplankton community, with a large distribution over the Rockall-Hatton Plateau (RHP) and IB. The Porcupine Abyssal Plain (PAP) region at the southern end of our transect was the region with the lowest biomass, as demonstrated by very low Chla concentrations and a community dominated by picophytoplankton. Early depletion of dissolved silicic acid (DSi) and increased stratification of the surface layer most likely triggered the end of the diatom bloom, leading to coccolithophore dominance. The chronic Si deficiency observed in the NEA could be linked to moderate Fe limitation, which increases the efficiency of the Si pump. TEP closely mirrored the distribution of both biogenic silica at depth and prymnesiophytes in the surface layer suggesting the sedimentation of the diatom bloom in the form of aggregates, but the relative contribution of diatoms and coccolithophores to carbon export in this area still needs to be resolved.

Description: A major role in regulation of global methane fluxes has been attributed to the process of anaerobic oxidation of methane (AOM), which is performed by consortia of methanotrophic archaea and sulfate reducing bacteria. An important question remains how these energy limited, slow growing Microorganisms with generation times of 3–7 months respond to rapid natural variations in methane fluxes at cold seeps. We used an experimental flow-through column system filled with cold seep sediments naturally enriched in methanotrophic communities, to test their responses to short-term variations in methane and sulfate fluxes. At stable methane and sulfate concentrations of ∼2 mM and 28 mM, respectively, we measured constant rates of AOM and sulfate reduction (SR) for up to 160 days of incubation. When percolated with methane-free medium, the anaerobic methanotrophs ceased to produce sulfide. After a starvation phase of 40 days, the addition of methane restored former AOM and SR rates immediately. At methane concentrations between 0–2.3 mM we measured a linear correlation between methane availability, AOM and SR. At constant fluid flow velocities of 30 m yr−1, ca. 50% of the methane was consumed by the anaerobic methanotrophic (ANME) population at all concentrations tested. Reducing the sulfate concentration from 28 to 1 mM, a decrease in AOM and SR by 50% was observed, and 45% of the methane was consumed. Hence, the marine anaerobic methanotrophs(ANME) are capable of oxidizing substantial amounts of methane over a wide and variable range of fluxes of the reaction educts.

Description: The relative importance of potential source and sink terms for bromoform (CHBr3) in the tropical Atlantic Ocean is investigated with a coupled physical-biogeochemical water column model. Bromoform production is either assumed to be linked to primary production or to phytoplankton losses; bromoform decay is treated as light dependent (photolysis), and in addition either vertically uniform, proportional to remineralisation or to nitrification. All experiments lead to the observed subsurface maximum of bromoform, corresponding to the subsurface phytoplankton biomass maximum. In the surface mixed layer, the concentration is set by entrainment from below, photolysis in the upper few meters and the outgassing to the atmosphere. The assumed bromoform production mechanism has only minor effects on the solution, but the various loss terms lead to significantly different bromoform concentrations below 200 m depth. The best agreement with observations is obtained when the bromoform decay is coupled to nitrification (parameterised by an inverse proportionality to the light field). Our model results reveal a pronounced seasonal cycle of bromoform outgassing, with a minimum in summer and a maximum in early winter, when the deepening surface mixed layer reaches down into the bromoform production layer

Description: The subtropical Indian Ocean along 32° S was for the first time simultaneously sampled in 2002 for inorganic carbon and transient tracers. The vertical distribution and inventory of anthropogenic carbon (CANT) from five different methods: four data-base methods (ΔC*, TrOCA, TTD and IPSL) and a simulation from the OCCAM model are compared and discussed along with the observed CFC-12 and CCl4 distributions. In the surface layer, where carbon-based methods are uncertain, TTD and OCCAM yield the same result (7±0.2 molC m−2), helping to specify the surface CANT inventory. Below the mixed-layer, the comparison suggests that CANT penetrates deeper and more uniformly into the Antarctic Intermediate Water layer limit than estimated from the much utilized ΔC* method. Significant CFC-12 and CCl4 values are detected in bottom waters, associated with Antarctic Bottom Water. In this layer, except for ΔC* and OCCAM, the other methods detect significant CANT values. Consequently, the lowest inventory is calculated using the ΔC* method (24±2 molC m−2) or OCCAM (24.4±2.8 molC m−2) while TrOCA, TTD, and IPSL lead to higher inventories (28.1±2.2, 28.9±2.3 and 30.8±2.5 molC m−2 respectively). Overall and despite the uncertainties each method is evaluated using its relationship with tracers and the knowledge about water masses in the subtropical Indian Ocean. Along 32° S our best estimate for the mean CANT specific inventory is 28±2 molC m−2. Comparison exercises for data-based CANT methods along with time-series or repeat sections analysis should help to identify strengths and caveats in the CANT methods and to better constrain model simulations.

Description: The relation between the Agulhas Current retroflection location and the magnitude of Agulhas leakage, the transport of water from the Indian to the Atlantic Ocean, is investigated in a high-resolution numerical ocean model. Sudden eastward retreats of the Agulhas Current retroflection loop are linearly related to the shedding of Agulhas rings, where larger retreats generate larger rings. Using numerical Lagrangian floats a 37 year time series of the magnitude of Agulhas leakage in the model is constructed. The time series exhibits large amounts of variability, both on weekly and annual time scales. A linear relation is found between the magnitude of Agulhas leakage and the location of the Agulhas Current retroflection, both binned to three month averages. In the relation, a more westward location of the Agulhas Current retroflection corresponds to an increased transport from the Indian Ocean to the Atlantic Ocean. When this relation is used in a linear regression and applied to almost 20 years of altimetry data, it yields a best estimate of the mean magnitude of Agulhas leakage of 13.2 Sv. The early retroflection of 2000, when Agulhas leakage was probably halved, can be identified using the regression.

Description: The accurate reconstruction of sea surface temperature (SST) history in climate-sensitive regions (e.g. tropical and polar oceans) became a challenging task in palaeoceanographic research. Biogenic shell carbonate SST proxies successfully developed for tropical regions often fail in cool water environments. Their major regional shortcomings and the cryptic diversity now found within the major high latitude proxy carrier Neogloboquadrina pachyderma (sin.) highlight an urgent need to explore complementary SST proxies for these cool-water regions. Here we incorporate the genetic component into a calibration study of a new SST proxy for the high latitudes. We found that the calcium isotopic composition (δ44/40Ca) of calcite from genotyped net catches and core-top samples of the planktonic foraminifera Neogloboquadrina pachyderma (sin.) is related to temperature and unaffected by genetic variations. The temperature sensitivity has been found to be 0.17 (±0.02)‰ per 1°C, highlighting its potential for downcore applications in open marine cool-water environments. Our results further indicate that in extreme polar environments, below a critical threshold temperature of 2.0 (±0.5)°C associated with salinities below 33.0 (±0.5)‰, a prominent shift in biomineralization affects the δ44/40Ca of genotyped and core-top N. pachyderma (sin.), becoming insensitive to temperature. These findings highlight the need of more systematic calibration studies on single planktonic foraminiferal species in order to unravel species-specific factors influencing the temperature sensitivity of Ca isotope fractionation and to validate the proxies' applicability.

Description: Water column data of carbon and carbon relevant hydrographic and hydrochemical parameters from 188 previously non-publicly available cruises in the Arctic, Atlantic, and Southern Ocean have been retrieved and merged into a new database: CARINA (CARbon IN the Atlantic). The data have been subject to rigorous quality control (QC) in order to ensure highest possible quality and consistency. The data for most of the parameters included were examined in order to quantify systematic biases in the reported values, i.e. secondary quality control. Significant biases have been corrected for in the data products, i.e. the three merged files with measured, calculated and interpolated values for each of the three CARINA regions; the Arctic Mediterranean Seas (AMS), the Atlantic (ATL) and the Southern Ocean (SO). With the adjustments the CARINA database is consistent both internally as well as with GLODAP (Key et al., 2004) and is suitable for accurate assessments of, for example, oceanic carbon inventories and uptake rates and for model validation. The Arctic Mediterranean Seas include the Arctic Ocean and the Nordic Seas, and the quality control was carried out separately in these two areas. This contribution provides an overview of the CARINA data from the Nordic Seas and summarises the findings of the QC of the salinity data. One cruise had salinity data that were of questionable quality, and these have been removed from the data product. An evaluation of the consistency of the quality controlled salinity data suggests that they are consistent to at least ±0.005.

Description: Advances in detector technology enable a new generation of infrared limb sounders to measure 2-D images of the atmosphere. A proposed limb cloud imager (LCI) mode will detect clouds with a spatial resolution unprecedented for limb sounding. For the inference of temperature and trace gas distributions, detector pixels of the LCI have to be combined into super-pixels which provide the required signal-to-noise and information content for the retrievals. This study examines the extent to which tropospheric coverage can be improved in comparison to limb sounding using a fixed field of view with the size of the super-pixels, as in conventional limb sounders. The study is based on cloud topographies derived from (a) IR brightness temperatures (BT) of geostationary weather satellites in conjunction with ECMWF temperature profiles and (b) ice and liquid water content data of the Consortium for Small-scale Modeling-Europe (COSMO-EU) of the German Weather Service. Limb cloud images are simulated by matching the cloud topography with the limb sounding line of sight (LOS). The analysis of the BT data shows that the reduction of the spatial sampling along the track has hardly any effect on the gain in information. The comparison between BT and COSMO-EU data identifies the strength of both data sets, which are the representation of the horizontal cloud extent for the BT data and the reproduction of the cloud amount for the COSMO-EU data. The results of the analysis of both data sets show the great advantage of the cloud imager. However, because both cloud data sets do not present the complete fine structure of the real cloud fields in the atmosphere it is assumed that the results tend to underestimate the increase in information. In conclusion, real measurements by such an instrument may result in an even higher benefit for tropospheric limb retrievals.

Description: The flux of materials to the deep sea is dominated by larger, organic-rich particles with sinking rates varying between a few meters and several hundred meters per day. Mineral ballast may regulate the transfer of organic matter and other components by determining the sinking rates, e.g. via particle density. We calculated particle sinking rates from mass flux patterns and alkenone measurements applying the results of sediment trap experiments from the Atlantic Ocean. We have indication for higher particle sinking rates in carbonate-dominated production systems when considering both regional and seasonal data. During a summer coccolithophorid bloom in the Cape Blanc coastal upwelling off Mauritania, particle sinking rates reached almost 570 m per day, most probably due the fast sedimentation of densely packed zooplankton fecal pellets, which transport high amounts of organic carbon associated with coccoliths to the deep ocean despite rather low production. During the recurring winter-spring blooms off NW Africa and in opal-rich production systems of the Southern Ocean, sinking rates of larger particles, most probably diatom aggregates, showed a tendency to lower values. However, there is no straightforward relationship between carbonate content and particle sinking rates. This could be due to the unknown composition of carbonate and/or the influence of particle size and shape on sinking rates. It also remains noticeable that the highest sinking rates occurred in dust-rich ocean regions off NW Africa, but this issue deserves further detailed field and laboratory investigations. We obtained increasing sinking rates with depth. By using a seven-compartment biogeochemical model, it was shown that the deep ocean organic carbon flux at a mesotrophic sediment trap site off Cape Blanc can be captured fairly well using seasonal variable particle sinking rates. Our model provides a total organic carbon flux of 0.29 Tg per year down to 3000 m off the NW African upwelling region between 5 and 35° N. Simple parameterisations of remineralisation and sinking rates in such models, however, limit their capability in reproducing the flux variation in the water column.

Description: We present a study of Saharan dust export towards the tropical North Atlantic using the regional dust emission, transport and deposition model LM-MUSCAT. Horizontal and vertical distribution of dust optical thickness, concentration, and dry and wet deposition rates are used to describe seasonality of dust export and deposition towards the eastern Atlantic for three typical months in different seasons. Deposition rates strongly depend on the vertical dust distribution, which differs with seasons. Furthermore the contribution of dust originating from the Bodélé Depression to Saharan dust over the Atlantic is investigated. A maximum contribution of Bodélé dust transported towards the Cape Verde Islands is evident in winter when the Bodélé source area is most active and dominant with regard to activation frequency and dust emission. Limitations of using satellite retrievals to estimate dust deposition are highlighted.

Description: The aim of the work presented here was to detect BrO in the marine boundary layer over the Eastern North-Atlantic by Multi AXis-Differential Optical Absorption Spectroscopy (MAX-DOAS) of scattered sunlight. With this technique, information about the concentration and the vertical profile of trace gases in the atmosphere can be gained. BrO can be formed in the marine atmosphere by degradation of biogenic organohalogens or by oxidation of bromide in sea salt aerosol. BrO influences the chemistry in marine air in many ways, e.g. since it catalytically destroys ozone, changes the NO2/NO-ratio as well as the OH/HO2-ratio and oxidises DMS. However, the abundance and the significance of BrO in the marine atmosphere is not yet fully understood. We report on data collected during a ship cruise, which took place along the West African Coast in February 2007, within the framework of the Surface Ocean PRocesses in the ANthropocene project (SOPRAN). Tropospheric BrO could be detected during this cruise at peak mixing ratios of (10.2±3.7) ppt at an assumed layer height of 1 km on 18 February 2007. Furthermore, it was found that the mean BrO concentrations increased when cruising close to the African Coast suggesting that at least part of the BrO might have originated from there.

Description: This paper analyzes the relationship between deep sedimentary fluxes and ocean current vertical velocities in an offshore area of the Ionian Sea, the deepest basin of the Eastern Mediterranean Sea. Sediment trap data are collected at 500 m and 2800 m depth in two successive moorings covering the period September 1999–May 2001. A tight coupling is observed between the upper and deep traps and the estimated particle sinking rates are more than 200 m day−1. The current vertical velocity field is computed from a 1/16°×1/16° Ocean General Circulation Model simulation and from the wind stress curl. Current vertical velocities are larger and more variable than Ekman vertical velocities, yet the general patterns are alike. Current vertical velocities are generally smaller than 1 m day−1: we therefore exclude a direct effect of downward velocities in determining high sedimentation rates. However we find that upward velocities in the subsurface layers of the water column are positively correlated with deep particle fluxes. We thus hypothesize that upwelling would produce an increase in upper ocean nutrient levels – thus stimulating primary production and grazing – a few weeks before an enhanced vertical flux is found in the sediment traps. High particle sedimentation rates may be attained by means of rapidly sinking fecal pellets produced by gelatinous macro-zooplankton. Other sedimentation mechanisms, such as dust deposition, are also considered in explaining large pulses of deep particle fluxes. The fast sinking rates estimated in this study might be an evidence of the efficiency of the biological pump in sequestering organic carbon from the surface layers of the deep Eastern Mediterranean basins.

Description: A compact, low-cost atmospheric pressure, chemical ionization mass spectrometer ("mini-CIMS") has been developed for continuous underway shipboard measurements of dimethylsulfide (DMS) in seawater. The instrument was used to analyze DMS in air equilibrated with flowing seawater across a porous Teflon membrane equilibrator. The equilibrated gas stream was diluted with air containing an isotopically-labeled internal standard. DMS is ionized at atmospheric pressure via proton transfer from water vapor, then declustered, mass filtered via quadrupole mass spectrometry, and detected with an electron multiplier. The instrument described here is based on a low-cost residual gas analyzer (Stanford Research Systems), which has been modified for use as a chemical ionization mass spectrometer. The mini-CIMS has a gas phase detection limit of 220 ppt DMS for a 1 min averaging time, which is roughly equivalent to a seawater DMS concentration of 0.1 nM DMS at 20°C. The mini-CIMS has the sensitivity, selectivity, and time response required for underway measurements of surface ocean DMS over the full range of oceanographic conditions. The simple, robust design and relatively low cost of the instrument are intended to facilitate use in process studies and surveys, with potential for long-term deployment on research vessels, ships of opportunity, and large buoys.

Description: Data on carbon and carbon-relevant hydrographic and hydrochemical parameters from previously non-publicly available cruise data sets in the Arctic, Atlantic and Southern Ocean have been retrieved and merged to a new database: CARINA (CARbon IN the Atlantic). These data have gone through rigorous quality control (QC) procedures to assure the highest possible quality and consistency. The data for most of the measured parameters in the CARINA data base were objectively examined in order to quantify systematic differences in the reported values, i.e. secondary quality control. Systematic biases found in the data have been corrected in the data products, i.e. three merged data files with measured, calculated and interpolated data for each of the three CARINA regions; Arctic, Atlantic and Southern Ocean. Out of a total of 188 cruise entries in the CARINA database, 98 were conducted in the Atlantic Ocean and of these, 75 cruises report alkalinity values. Here we present details of the secondary QC on alkalinity for the Atlantic Ocean part of CARINA. Procedures of quality control, including crossover analysis between cruises and inversion analysis of all crossover data are briefly described. Adjustments were applied to the alkalinity values for 16 of the cruises in the Atlantic Ocean region. With these adjustments the CARINA database is consistent both internally as well as with GLODAP data, an oceanographic data set based on the World Hydrographic Program in the 1990s. Based on our analysis we estimate the internal accuracy of the CARINA-ATL alkalinity data to be 3.3 μmol kg−1. The CARINA data are now suitable for accurate assessments of, for example, oceanic carbon inventories and uptake rates and for model validation.

Description: Here we present monthly, basin-wide maps of the partial pressure of carbon dioxide (pCO2) for the North Atlantic on a 1° latitude by 1° longitude grid for years 2004 through 2006 inclusive. The maps have been computed using a neural network technique which reconstructs the non-linear relationships between three biogeochemical parameters and marine pCO2. A self organizing map (SOM) neural network has been trained using 389 000 triplets of the SeaWiFS-MODIS chlorophyll-a concentration, the NCEP/NCAR reanalysis sea surface temperature, and the FOAM mixed layer depth. The trained SOM was labelled with 137 000 underway pCO2 measurements collected in situ during 2004, 2005 and 2006 in the North Atlantic, spanning the range of 208 to 437 μatm. The root mean square error (RMSE) of the neural network fit to the data is 11.6 μatm, which equals to just above 3 per cent of an average pCO2 value in the in situ dataset. The seasonal pCO2 cycle as well as estimates of the interannual variability in the major biogeochemical provinces are presented and discussed. High resolution combined with basin-wide coverage makes the maps a useful tool for several applications such as the monitoring of basin-wide air-sea CO2 fluxes or improvement of seasonal and interannual marine CO2 cycles in future model predictions. The method itself is a valuable alternative to traditional statistical modelling techniques used in geosciences.

Description: Future ocean acidification has the potential to adversely affect many marine organisms. A growing body of evidence suggests that many species could suffer from reduced fertilization success, decreases in larval- and adult growth rates, reduced calcification rates, and even mortality when being exposed to near-future levels (year 2100 scenarios) of ocean acidification. Little research focus is currently placed on those organisms/taxa that might be less vulnerable to the anticipated changes in ocean chemistry; this is unfortunate, as the comparison of more vulnerable to more tolerant physiotypes could provide us with those physiological traits that are crucial for ecological success in a future ocean. Here, we attempt to summarize some ontogenetic and lifestyle traits that lead to an increased tolerance towards high environmental pCO2. In general, marine ectothermic metazoans with an extensive extracellular fluid volume may be less vulnerable to future acidification as their cells are already exposed to much higher pCO2 values (0.1 to 0.4 kPa, ca. 1000 to 3900 μatm) than those of unicellular organisms and gametes, for which the ocean (0.04 kPa, ca. 400 μatm) is the extracellular space. A doubling in environmental pCO2 therefore only represents a 10% change in extracellular pCO2 in some marine teleosts. High extracellular pCO2 values are to some degree related to high metabolic rates, as diffusion gradients need to be high in order to excrete an amount of CO2 that is directly proportional to the amount of O2 consumed. In active metazoans, such as teleost fish, cephalopods and many brachyuran crustaceans, exercise induced increases in metabolic rate require an efficient ion-regulatory machinery for CO2 excretion and acid-base regulation, especially when anaerobic metabolism is involved and metabolic protons leak into the extracellular space. These ion-transport systems, which are located in highly developed gill epithelia, form the basis for efficient compensation of pH disturbances during exposure to elevated environmental pCO2. Compensation of extracellular acid-base status in turn may be important in avoiding metabolic depression. So far, maintained "performance" at higher seawater pCO2 (〉0.3 to 0.6 kPa) has only been observed in adults/juveniles of active, high metabolic species with a powerful ion regulatory apparatus. However, while some of these taxa are adapted to cope with elevated pCO2 during their regular embryonic development, gametes, zygotes and early embryonic stages, which lack specialized ion-regulatory epithelia, may be the true bottleneck for ecological success – even of the more tolerant taxa. Our current understanding of which marine animal taxa will be affected adversely in their physiological and ecological fitness by projected scenarios of anthropogenic ocean acidification is quite incomplete. While a growing amount of empirical evidence from CO2 perturbation experiments suggests that several taxa might react quite sensitively to ocean acidification, others seem to be surprisingly tolerant. However, there is little mechanistic understanding on what physiological traits are responsible for the observed differential sensitivities (see reviews of Seibel and Walsh, 2003; Pörtner et al., 2004; Fabry et al., 2008; Pörtner, 2008). This leads us to the first very basic question of how to define general CO2 tolerance on the species level.

Description: Since the seminal paper of Redfield (1934), constant stoichiometric elemental ratios linking biotic carbon and nutrient fluxes are often assumed in marine biogeochemistry, and especially in coupled biogeochemical circulation models, to couple the global oxygen, carbon and nutrient cycles. However, when looking in more detail, some deviations from the classical Redfield stoichiometry have been reported, in particular with respect to remineralization of organic matter changing with depth or with ambient oxygen levels. We here compare the assumptions about the stoichiometry of organic matter and its remineralization that are used explicitly and implicitly in common biogeochemical ocean models. We find that the implicit assumptions made about the hydrogen content of organic matter can lead to inconsistencies in the modeled remineralization and denitrification stoichiometries. It is suggested that future marine biogeochemical models explicitly state the chemical composition assumed for the organic matter, including its oxygen and hydrogen content.

Description: Data on carbon and carbon-relevant hydrographic and hydrochemical parameters from previously non-publicly available cruise data sets in the Arctic, Atlantic and Southern Ocean have been retrieved and merged to a new database: CARINA (CARbon IN the Atlantic). These data have gone through rigorous quality control (QC) procedures to assure the highest possible quality and consistency. The data for most of the measured parameters in the CARINA data base were objectively examined in order to quantify systematic differences in the reported values, i.e. secondary quality control. Systematic biases found in the data have been corrected in the data products, i.e. three merged data files with measured, calculated and interpolated data for each of the three CARINA regions; Arctic Mediterranean Seas, Atlantic and Southern Ocean. Out of a total of 188 cruise entries in the CARINA database, 98 were conducted in the Atlantic Ocean and of these 84 cruises report nitrate values, 79 silicate, and 78 phosphate. Here we present details of the secondary QC for nutrients for the Atlantic Ocean part of CARINA. Procedures of quality control, including crossover analysis between cruises and inversion analysis of all crossover data are briefly described. Adjustments were applied to the nutrient values for 43 of the cruises in the Atlantic Ocean region. With these adjustments the CARINA database is consistent both internally as well as with GLODAP data, an oceanographic data set based on the World Hydrographic Program in the 1990s (Key et al., 2004). Based on our analysis we estimate the internal accuracy of the CARINA-ATL nutrient data to be: nitrate 1.5%; phosphate 2.6%; silicate 3.1%. The CARINA data are now suitable for accurate assessments of, for example, oceanic carbon inventories and uptake rates and for model validation.

Description: Highly accurate and precise measurements of marine carbon components are required in the study of the marine carbon cycle, particularly when investigating the causes for its variability from seasonal to interannual timescales. This is especially true in the investigation of the consequences of anthropogenic influences. The analysis of any marine carbon component requires elaborate instrumentation, most of which is currently used onboard ships, either in manual or automated mode. Technological developments result in more and more instruments that have sufficient long-term reliability so that they can be deployed on commercial ships, surface moorings, and buoys, whilst the great technological and operational challenges mean that only few sensors have been developed that can be used for sub-surface in situ measurements on floats, robots, or gliders. There is a special need for autonomous instruments and sensors that are able to measure a combination of different components, in order to increase the spatial and temporal coverage of marine carbon data. This paper describes analytical techniques used for the measurement of the marine dissolved carbon components, both inorganic and organic: the fugacity of CO2, total dissolved inorganic carbon, pH, alkalinity, and dissolved organic carbon. By pointing out advantages, disadvantages, and/or challenges of the techniques employed in the analysis of each component, we aim to aid non-carbon marine scientists, sensor developers and technologists, in the decision of which challenges to address in further development.

Description: The sensitivity of oceanic CO2 uptake to alterations in the marine biological carbon pump, such as brought about by natural or purposeful ocean fertilization, has repeatedly been investigated by studies employing numerical biogeochemical ocean models. It is shown here that the results of such ocean-centered studies are very sensitive to the assumption made about the response of the carbon reservoirs on the atmospheric side of the sea surface. Assumptions made include prescribed atmospheric pCO2, an interactive atmospheric CO2 pool exchanging carbon with the ocean but not with the terrestrial biosphere, and an interactive atmosphere that exchanges carbon with both oceanic and terrestrial carbon pools. The impact of these assumptions on simulated annual to millennial oceanic carbon uptake is investigated for a hypothetical increase in the C:N ratio of the biological pump and for an idealized enhancement of phytoplankton growth. Compared to simulations with interactive atmosphere, using prescribed atmospheric pCO2 overestimates the sensitivity of the oceanic CO2 uptake to changes in the biological pump, by about 2%, 25%, 100%, and 〉500% on annual, decadal, centennial, and millennial timescales, respectively. The smaller efficiency of the oceanic carbon uptake under an interactive atmosphere is due to the back flux of CO2 that occurs when atmospheric CO2 is reduced. Adding an interactive terrestrial carbon pool to the atmosphere-ocean model system has a small effect on annual timescales, but increases the simulated fertilization-induced oceanic carbon uptake by about 4%, 50%, and 100% on decadal, centennial, and millennial timescales, respectively, for pCO2 sensitivities of the terrestrial carbon storage in the middle range of the C4MIP models (Friedlingstein et al., 2006). For such sensitivities, a substantial fraction of oceanic carbon uptake induced by natural or purposeful ocean fertilization originates, on timescales longer than decades, not from the atmosphere but from the terrestrial biosphere.

Description: Monomethylamine (MA), dimethylamine (DMA) and diethylamine (DEA) were detected at non-negligible concentrations in sub-micrometer particles at the Cap Verde Atmospheric Observatory (CVAO) located on the island of São Vicente in Cape Verde during algal blooms in 2007. The concentrations of these amines in five stage impactor samples ranged from 0–30 pg m−3 for MA, 130–360 pg m−3 for DMA and 5–110 pg m−3 for DEA during the spring bloom in May 2007 and 2–520 pg m−3 for MA, 100–1400 pg m−3 for DMA and 90–760 pg m−3 for DEA during an unexpected winter algal bloom in December 2007. Anomalously high Saharan dust deposition and intensive ocean layer deepening were found at the Atmospheric Observatory and the associated Ocean Observatory during algal bloom periods. The highest amine concentrations in fine particles (impactor stage 2, 0.14–0.42 μm) indicate that amines are likely taken up from the gas phase into the acidic sub-micrometer particles. The contribution of amines to the organic carbon (OC) content ranged from 0.2–2.5% C in the winter months, indicating the importance of this class of compounds to the carbon cycle in the marine environment. Furthermore, aliphatic amines originating from marine biological sources likely contribute significantly to the nitrogen content in the marine atmosphere. The average contribution of the amines to the detected nitrogen species in sub-micrometer particles can be non-negligible, especially in the winter months (0.1% N–1.5% N in the sum of nitrate, ammonium and amines). This indicates that these smaller aliphatic amines can be important for the carbon and the nitrogen cycles in the remote marine environment.

Description: The surface ocean absorbs large quantities of the CO2 emitted to the atmosphere from human activities. As this CO2 dissolves in seawater, it reacts to form carbonic acid. While this phenomenon, called ocean acidification, has been found to adversely affect many calcifying organisms, some photosynthetic organisms appear to benefit from increasing [CO2]. Among these is the cyanobacterium Trichodesmium, a predominant diazotroph (nitrogen-fixing) in large parts of the oligotrophic oceans, which responded with increased carbon and nitrogen fixation at elevated pCO2. With the mechanism underlying this CO2 stimulation still unknown, the question arises whether this is a common response of diazotrophic cyanobacteria. In this study we therefore investigate the physiological response of Nodularia spumigena, a heterocystous bloom-forming diazotroph of the Baltic Sea, to CO2-induced changes in seawater carbonate chemistry. N. spumigena reacted to seawater acidification/carbonation with reduced cell division rates and nitrogen fixation rates, accompanied by significant changes in carbon and phosphorus quota and elemental composition of the formed biomass. Possible explanations for the contrasting physiological responses of Nodularia compared to Trichodesmium may be found in the different ecological strategies of non-heterocystous (Trichodesmium) and heterocystous (Nodularia) cyanobacteria.

Description: Daily timeseries of the meridional overturning circulation (MOC) estimated from the UK/US RAPID/MOCHA array at 26.5° N in the Atlantic are used to evaluate the MOC as simulated in two global circulation models: (I) an 8-member ensemble of the coupled climate model ECHAM5/MPI-OM, and (II) the ECCO-GODAE state estimate. In ECHAM5/MPI-OM, we find that the observed and simulated MOC have a similar variability and time-mean within the 99% confidence interval. In ECCO-GODAE, we find that the observed and simulated MOC show a significant correlation within the 99% confidence interval. To investigate the contribution of the different transport components, the MOC is decomposed into Florida Current, Ekman and mid-ocean transports. In both models, the mid-ocean transport is closely approximated by the residual of the MOC minus Florida Current and Ekman transports. As the models conserve volume by definition, future comparisons of the RAPID/MOCHA mid-ocean transport should be done against the residual transport in the models. The similarity in the variance and the correlation between the RAPID/MOCHA, and respectively ECHAM5/MPI-OM and ECCO-GODAE MOC estimates at 26.5° N is encouraging in the context of estimating (natural) variability in climate simulations and its use in climate change signal-to-noise detection analyses. Enhanced confidence in simulated hydrographic and transport variability will require longer observational time series.

Description: Offshore south central Chile (35° S–42° S), the morphology of the lowermost continental slope and trench floor witnesses a voluminous submarine mass-wasting event. The blocky slide body deposited in the Chile Trench at 73°46´ W 35°35´ S was targeted for study during RRS JAMES COOK Cruise JC23 and termed Reloca Slide. Its size of about 24 km3, its steep and high headscarp, the spatial distribution of slide deposits and the cohesive nature of major slide blocks make it interesting to address the issue of tsunami generation. We have obtained seismic reflection data that partly reveal the internal structure of the slide body. Gravity core samples were retrieved that will allow the slide to be dated and linked to the history of sedimentation and slope stability along this particular segment of the Chilean convergent margin. At present we assume a Holocene age for the sliding event.

Description: The ENVISAT validation programme for the atmospheric instruments MIPAS, SCIAMACHY and GOMOS is based on a number of balloon-borne, aircraft, satellite and ground-based correlative measurements. In particular the activities of validation scientists were coordinated by ESA within the ENVISAT Stratospheric Aircraft and Balloon Campaign or ESABC. As part of a series of similar papers on other species [this issue] and in parallel to the contribution of the individual validation teams, the present paper provides a synthesis of comparisons performed between MIPAS CH4 and N2O profiles produced by the current ESA operational software (Instrument Processing Facility version 4.61 or IPF v4.61, full resolution MIPAS data covering the period 9 July 2002 to 26 March 2004) and correlative measurements obtained from balloon and aircraft experiments as well as from satellite sensors or from ground-based instruments. In the middle stratosphere, no significant bias is observed between MIPAS and correlative measurements, and MIPAS is providing a very consistent and global picture of the distribution of CH4 and N2O in this region. In average, the MIPAS CH4 values show a small positive bias in the lower stratosphere of about 5%. A similar situation is observed for N2O with a positive bias of 4%. In the lower stratosphere/upper troposphere (UT/LS) the individual used MIPAS data version 4.61 still exhibits some unphysical oscillations in individual CH4 and N2O profiles caused by the processing algorithm (with almost no regularization). Taking these problems into account, the MIPAS CH4 and N2O profiles are behaving as expected from the internal error estimation of IPF v4.61 and the estimated errors of the correlative measurements.

Description: A one-dimensional model of Fe speciation and biogeochemistry, coupled with the General Ocean Turbulence Model (GOTM) and a NPZD-type ecosystem model, is applied for the Tropical Eastern North Atlantic Time-Series Observatory (TENATSO) site. Among diverse processes affecting Fe speciation, this study is focusing on investigating the role of dust particles in removing dissolved iron (DFe) by a more complex description of particle aggregation and sinking, and explaining the abundance of organic Fe-binding ligands by modelling their origin and fate. The vertical distribution of different particle classes in the model shows high sensitivity to changing aggregation rates. Using the aggregation rates from the sensitivity study in this work, modelled particle fluxes are close to observations, with dust particles dominating near the surface and aggregates deeper in the water column. POC export at 1000 m is a little higher than regional sediment trap measurements, suggesting further improvement of modelling particle aggregation, sinking or remineralisation. Modelled strong ligands have a high abundance near the surface and decline rapidly below the deep chlorophyll maximum, showing qualitative similarity to observations. Without production of strong ligands, phytoplankton concentration falls to 0 within the first 2 years in the model integration, caused by strong Fe-limitation. A nudging of total weak ligands towards a constant value is required for reproducing the observed nutrient-like profiles, assuming a decay time of 7 years for weak ligands. This indicates that weak ligands have a longer decay time and therefore cannot be modelled adequately in a one-dimensional model. The modelled DFe profile is strongly influenced by particle concentration and vertical distribution, because the most important removal of DFe in deeper waters is colloid formation and aggregation. Redissolution of particulate iron is required to reproduce an observed DFe profile at TENATSO site. Assuming colloidal iron is mainly composed of inorganic colloids, the modelled colloidal to soluble iron ratio is lower that observations, indicating the importance of organic colloids.

Description: The Rapid instrument array across the Atlantic Ocean along 26 degrees N provides unprecedented monitoring of the basin-scale circulation. A unique feature of the Rapid array is the combination of full-depth moorings with instruments measuring temperature, salinity, pressure time series at many depths with co-located bottom pressure measurements so that dynamic pressure can be measured from surface to bottom. Bottom pressure measurements show a zonally uniform rise (and fall) of bottom pressure of 0.015 dbar on a 5 to 10 day time scale, suggesting that the Atlantic basin is filling and draining on a short time scale. After removing the zonally uniform bottom pressure fluctuations, bottom pressure variations at 4000 m depth against the western boundary compensate instantaneously for baroclinic fluctuations in the strength and structure of the deep western boundary current so there is no basin-scale mass imbalance resulting from variations in the deep western boundary current. After removing the mass compensating bottom pressure, residual bottom pressure fluctuations at the western boundary just east of the Bahamas balance variations in Gulf Stream transport. Again the compensation appears to be especially confined close to the western boundary. Thus, fluctuations in either Gulf Stream or deep western boundary current transports are compensated in a depth independent (barotropic) manner very close to the continental slope off the Bahamas. In contrast, compensation for variations in wind-driven surface Ekman transport appears to involve fluctuations in both western basin and eastern basin bottom pressures, though the bottom pressure difference fluctuations appear to be a factor of 3 too large, perhaps due to an inability to resolve small bottom pressure fluctuations after removal of larger zonal average, baroclinic, and Gulf Stream pressure components. For 4 tall moorings where time series dynamic height (geostrophic pressure) profiles can be estimated from sea surface to ocean bottom and bottom pressure can be added, there is no general correlation between surface dynamic height and bottom pressure. Dynamic height on each mooring is strongly correlated with sea surface height from satellite observations and the variability in both dynamic height and satellite sea surface height decrease sharply as the western boundary is approached.

Description: Iron chemistry measurements were conducted during summer 2007 at two distinct locations in the Baltic Sea (Gotland Deep and Landsort Deep) to evaluate the role of iron for cyanobacterial bloom development in these estuarine waters. Depth profiles of Fe(II) were measured by chemiluminescent flow injection analysis (CL-FIA). Up to 0.9 nmol Fe(II) L−1 were detected in light penetrated surface waters, which constitutes up to 20% to the dissolved Fe pool. This bioavailable iron source is a major contributor to the Fe requirements of Baltic Sea phytoplankton and apparently plays a major role for cyanobacterial bloom development during our study. Measured Fe(II) half life times in oxygenated water exceed predicted values and indicate organic Fe(II) complexation. Potential sources for Fe(II) ligands, including rainwater, are discussed. Fe(II) concentrations of up to 1.44 nmol L−1 were detected at water depths below the euphotic zone, but above the oxic anoxic interface. Mixed layer depths after strong wind events are not deep enough in summer time to penetrate the oxic-anoxic boundary layer. However, Fe(II) from anoxic bottom water may enter the sub-oxic zone via diapycnal mixing and diffusion.

Description: Increasing atmospheric carbon dioxide (CO2) through human activities and invasion of anthropogenic CO2 into the surface ocean alters the seawater carbonate chemistry, increasing CO2 and bicarbonate (HCO3−) at the expense of carbonate ion (CO32−) concentrations. This redistribution in the dissolved inorganic carbon (DIC) pool decreases pH and carbonate saturation state (Ω). Several components of the carbonate system are considered potential key variables influencing for instance calcium carbonate precipitation in marine calcifiers such as coccolithophores, foraminifera, corals, mollusks and echinoderms. Unravelling the sensitivities of marine organisms and ecosystems to CO2 induced ocean acidification (OA) requires well-controlled experimental setups and accurate carbonate system manipulations. Here we describe and analyse the chemical changes involved in the two basic approaches for carbonate chemistry manipulation, i.e. changing DIC at constant total alkalinity (TA) and changing TA at constant DIC. Furthermore, we briefly introduce several methods to experimentally manipulate DIC and TA. Finally, we examine responses obtained with both approaches using published results for the coccolithophore Emiliania huxleyi. We conclude that under most experimental conditions in the context of ocean acidification DIC and TA manipulations yield similar changes in all parameters of the carbonate system, which implies direct comparability of data obtained with the two basic approaches for CO2 perturbation.

Description: Air/sea fluxes of dimethylsulfide (DMS) were measured by eddy correlation over the Eastern South Pacific Ocean during January 2006. The cruise track extended from Manzanillo, Mexico, along 110° W, to Punta Arenas, Chile. Bulk air and surface ocean DMS levels were also measured and gas transfer coefficients (kDMS) were computed. Air and seawater DMS measurements were made using chemical ionization mass spectrometry (API-CIMS) and a gas/liquid membrane equilibrator. Mean surface seawater DMS concentrations were 3.8±2.2 nM and atmospheric mixing ratios were 340±370 ppt. The air/sea flux of DMS was uniformly out of the ocean, with an average value of 12±15 μmol m‑2 d‑1. Sea surface concentration and flux were highest around 15° S, in a region influenced by shelf waters and lowest around 25° S, in low chlorophyll gyre waters. The DMS gas transfer coefficient exhibited a linear wind speed-dependence over the wind speed range of 1 to 9 m s‑1. This relationship is compared with previously measured estimates of k from DMS, CO2, and dual tracer data from the Atlantic and Pacific Ocean, and with the NOAA/COARE gas transfer model. The model generated slope of k vs. wind speed is at the low end of those observed in previous DMS field studies.

Description: In the CARINA (Carbon dioxide in the Atlantic Ocean) project, a new dataset with many previously unpublished hydrographic data from the Atlantic, Arctic and Southern Ocean was assembled and subjected to careful quality control (QC) procedures. Here, we present the dissolved oxygen measurements in the Atlantic region of the dataset and describe in detail the secondary QC procedures that aim to ensure that the data are internally consistent. This is achieved by a cross-over analysis, i.e. the comparison of deep ocean data at places that were sampled by different cruises at different times. Initial adjustments to the individual cruises were then determined by an inverse procedure that computes a set of adjustments that requires the minimum amount of adjustment and at the same time reduces the offsets in an optimal manner. The initial adjustments were then reviewed by the CARINA members, and only those that passed the following two criteria were adopted: (i) the region is not subject to substantial temporal variability, and (ii) the adjustment must be based on at least three stations from each cruise. No adjustment was recommended for cruises that did not fit these criteria. The final CARINA-Oxygen dataset has 103414 oxygen samples from 9491 stations obtained during 98 cruises covering three decades. The sampling density of the oxygen data is particularly good in the North Atlantic north of about 40° N especially after 1987. In contrast, the sample density in the South Atlantic is much lower. Some cruises appear to have poor data quality, and were subsequently omitted from the adjusted dataset. Of the data included in the adjusted dataset, 20% were adjusted with a mean adjustment of 2%. Due to the achieved internal consistency, the resulting product is well suited to produce an improved climatology or to study long-term changes in the oxygen content of the ocean. However, the adjusted dataset is not necessarily better suited than the unadjusted data to address questions that require a high level of accuracy, such as the computation of the saturation state.

Description: The detection of cloudiness is investigated by means of partial and total cloud amount estimations from pyrgeometer radiation measurements and visible all-sky imager observations. The measurements have been performed in Westerland, a seaside resort on the North Sea island of Sylt, Germany, during summer 2005. An improvement to previous studies on this subject resulting in the first time partial cloud amounts (PCAs), defined as cloud amounts without high clouds calculated from longwave downward radiation (LDR) according to the APCADA algorithm (Dürr and Philipona, 2004), are validated against both human observations from the National Meteorological Servive DWD at the nearby airport of Sylt and digital all-sky imaging. The aim is to establish the APCADA scheme at a coastal midlatitude site for longterm observations of cloud cover and to quantify errors resulting from the different methods of detecting cloudiness. Differences between the resulting total cloud amounts (TCAs), defined as cloud amount for all-cloud situations, derived from the camera images and from human observations are within ±1 octa in 72% and within ±2 octa in 85% of the cases. Compared to human observations, PCA measurements, according to APCADA, underestimate the observed cloud cover in 47% of all cases and the differences are within ±1 octa in 60% and ±2 octa in 74% of all cases. Since high cirrus clouds can not be derived from LDR, separate comparisons for all cases without high clouds have been performed showing an agreement within ±1(2) octa in 73(90)% for PCA and also for camera-derived TCA. For this coastal mid-latitude site under investigation, we find similar though slightly smaller agreements to human observations as reported by Dürr and Philipona (2004). Though limited to daytime, the cloud cover retrievals from the sky imager are not really affected by cirrus clouds and provide a more reliable cloud climatology for all-cloud conditions than APCADA.

Description: Requirements for understanding the relationships between ocean color and suspended and dissolved materials within the water column, and a rapidly emerging photonics and materials technology base for performing optical based analytical techniques have generated a diverse offering of commercial sensors and research prototypes that perform optical measurements in water. Through inversion, these tools are now being used to determine a diverse set of related biogeochemical and physical parameters. Techniques engaged include measurement of the solar radiance distribution, absorption, scattering, stimulated fluorescence, flow cytometry, and various spectroscopy methods. Selective membranes and other techniques for material isolation further enhance specificity, leading to sensors for measurement of dissolved oxygen, methane, carbon dioxide, common nutrients and a variety of other parameters. Scientists are using these measurements to infer information related to an increasing set of parameters and wide range of applications over relevant scales in space and time.

Description: A major role in global methane fluxes has been attributed to the process of anaerobic oxidation of methane, which is performed by consortia of methanotrophic archaea and sulfate reducing bacteria. An important question remains how these very slow growing microorganisms with generation times of 3–7 months respond to natural variations in methane fluxes at cold seeps. Here, we used an experimental flow-through column system filled with cold seep sediments naturally enriched in methanotrophic communities, to test their response to short-term variations in methane and sulfate fluxes. At stable methane and sulfate concentrations of ~2 mM and 28 mM, respectively, we measured constant rates of anaerobic oxidation of methane (AOM) and sulfide production (SR) for up to 160 days of incubation. When percolated with methane-free medium, the anaerobic methanotrophs ceased to oxidize methane and to produce sulfide. After a starvation phase of 40 days, the addition of methane restored former AOM and SR rates immediately. At methane concentrations between 0–2.3 mM we measured a linear correlation between methane availability, AOM and SR. At constant fluid flow rates of 30 m yr−1, ca. 50% of the methane was consumed by the ANME population at all concentrations tested. Reducing the sulfate concentration from 28 to 1 mM, a decrease in AOM and SR by 35% was observed. Hence, the marine anaerobic methanotrophs (ANME) are capable to consume substantial amounts of methane rising from the subsurface seabed to the hydrosphere over a wide range of fluxes of methane and sulfate.

Description: The coastal ocean is a crucial link between land, the open ocean and the atmosphere. The shallowness of the water column permits close interactions between the sedimentary, aquatic and atmospheric compartments, which otherwise are decoupled at long time scales (≅ 1000 yr) in the open oceans. Despite the prominent role of the coastal oceans in absorbing atmospheric CO2 and transferring it into the deep oceans via the continental shelf pump, the underlying mechanisms remain only partly understood. Evaluating observations from the North Sea, a NW European shelf sea, we provide evidence that anaerobic degradation of organic matter, fuelled from land and ocean, generates total alkalinity (AT) and increases the CO2 buffer capacity of seawater. At both the basin wide and annual scales anaerobic AT generation in the North Sea's tidal mud flat area irreversibly facilitates 7–10%, or taking into consideration benthic denitrification in the North Sea, 20–25% of the North Sea's overall CO2 uptake. At the global scale, anaerobic AT generation could be accountable for as much as 60% of the uptake of CO2 in shelf and marginal seas, making this process, the anaerobic pump, a key player in the biological carbon pump. Under future high CO2 conditions oceanic CO2 storage via the anaerobic pump may even gain further relevance because of stimulated ocean productivity.

Description: For the first time the long-term interannual and spatial variability of residence time (τ) is presented for the TTL between 360 K and 400 K potential temperature (~14 to 18 km altitude). The analysis is based on a Lagrangian approach using offline calculated diabatic heating rates as vertical velocities, covering Northern Hemisphere (NH) winters from 1962–2004. The residence time τLCP–400 K, being the duration time of air parcels in the layer between the Lagrangian Cold Point (LCP) and 400 K, varies spatially and is longer (〉50 days) over the maritime continent as the LCP is lowest there (〈370 K). Comparing three theta layers within the TTL reveals the vertical dependence of τ. We derive a mean duration time of 34 days for 360–380 K (lower TTL), 38 days for 380–400 K (upper TTL) and 70 days for 360–400 K theta layers for the 1962–2001 period. A case analysis reveals that τ is positively skewed for 360–380 K and 380–400 K during La Niña and El Niño Southern Oscillation (ENSO) neutral years. For these cases, ~60% of air parcels travel from 360 K to 380 K within 25 days. There is large interannual variability for τ varying up to ±20% from the long-term mean, with strongest variability seen in the lower part of the TTL. Statistical analysis reveals a significant anti-correlation between the residence time and the extratropical and subtropical wave driving in the lowermost stratosphere.

Description: Living benthic foraminifera of Flensburg Fjord were surveyed in June 2006. The muddy and organic-rich sediments of the inner fjord were dominated by Elphidium incertum. E. incertum and E. excavatum were frequent in muds and sandy muds of the fjord loop around Holnis Peninsula and in the outer part. Gelting Bay yielded a different biofacies, indicating a brackish and sandy habitat, poor in food supply and with microfauna dominated by Ammonia beccarii and E. albiumbilicatum. The central fjord and nearshore zones of the loop were characterized by sandy muds, relatively poor in food and occupied by A. beccarii, E. incertum and E. excavatum subspecies. High abundances of E. excavatum were encountered in the innermost fjord, with fine-grained and organic-rich muddy sediments. A comparison with previous studies revealed the profound changes in species composition in the outer Flensburg Fjord since the 1970s. A decline in numbers of Ammotium cassis and flourishing of Ammonia beccarii in Gelting Bay were recognized. These changes are most likely associated with decreased intensity and frequency of salt-water inflows into the Baltic Sea since the 1960s. It is inferred that the decline of A. cassis is similar to that of Eggerelloides scaber, which currently is found only in depressions of Kiel Bight with higher salinity.

Description: Initially a North Atlantic project, the CARINA carbon synthesis was extended to include the Southern Ocean. Carbon and relevant hydrographic and geochemical ancillary data from cruises all across the Arctic Mediterranean Seas, Atlantic and Southern Ocean were released to the public and merged into a new database as part of the CARINA synthesis effort. Of a total of 188 cruises, 37 cruises are part of the Southern Ocean, including 11 from the Atlantic sector. The variables from all Southern Ocean cruises, including dissolved inorganic carbon (TCO2), total alkalinity, oxygen, nitrate, phosphate and silicate, were examined for cruise-to-cruise consistency in one collective effort. Seawater pH and chlorofluorocarbons (CFCs) are also part of the database, but the pH quality control (QC) is described in another Earth System Science Data publication, while the complexity of the Southern Ocean physics and biogeochemistry prevented a proper QC analysis of the CFCs. The area-specific procedures of quality control, including crossover analysis between stations and inversion analysis of all crossover data (i.e. secondary QC), are briefly described here for the Atlantic sector of the Southern Ocean. Data from an existing, quality controlled database (GLODAP) were used as a reference for our computations – however, the reference data were included into the analysis without applying the recommended GLODAP adjustments so the corrections could be independently verified. The outcome of this effort is an internally consistent, high-quality carbon data set for all cruises, including the reference cruises. The suggested corrections by the inversion analysis were allowed to vary within a fixed envelope, thus accounting for natural variability. The percentage of cruises adjusted ranged from 31% (for nitrate) to 54% (for phosphate) depending on the variable.

Description: Mesocosms experiments (PeECE II and PeECE III) were carried out in 9 transparent mesocosms. Prior to the experimental period, the seawater carbonate system was manipulated to achieve three different levels of CO2. At the onset of the experimental period, nutrients were added to all mesocosms in order to initiate phytoplankton blooms. Rates of primary production were measured by in-situ incubations using 14C-incorporation and oxygen production/consumption. Particulate primary production by 14C was also size fractionated and compared with phytoplankton species composition. Nutrient supply increased the primary production rates, and a net autotrophic phase with 14C-fixation rates up to 4 times higher than initial was observed midway through the 24 days experiment before net community production returned to near-zero and 14C-fixation rates relaxed back to lower than initial. We found a trend in the 14C-based measurements towards higher cumulative primary production at higher pCO2, consistent with recently published results for DIC removal (Riebesell et al., 2007). There where found differences to the size fractionated primary production response to CO2 treatments. The plankton composition changes throughout the bloom, however, resulted in no significant response until the final phase of the experiment where phytoplankton growth became nutrient limited, and phytoplankton community changed from diatom to flagellate dominance. This opens for the two alternative hypotheses that such an effect is associated with mineral nutrient limited growth, and/or with phytoplankton species composition. The lack of a clear net heterotrophic phase in the last part of the experiment supports the idea that a substantial part of production in the upper layer was not degraded locally, but either accumulated there or was exported vertically.