ALBERT

Description: This is the first volume to take a broad historical sweep of the close relation between medicines and poisons in the Western tradition, and their interconnectedness. They are like two ends of a spectrum, for the same natural material can be medicine or poison, depending on the dose, and poisons can be transformed into medicines, while medicines can turn out to be poisons. The book looks at important moments in the history of the relationship between poisons and medicines in European history, from Roman times, with the Greek physician Galen, through the Renaissance and the maverick physician Paracelsus, to the present, when poisons are actively being turned into beneficial medicines.

Description: New biostratigraphical, geochemical, and magnetic evidence is synthesized with IODP Expedition 352 shipboard results to understand the sedimentary and tectono-magmatic development of the Izu–Bonin outer forearc region. The oceanic basement of the Izu–Bonin forearc was created by supra-subduction zone seafloor spreading during early Eocene (c. 50–51 Ma). Seafloor spreading created an irregular seafloor topography on which talus locally accumulated. Oxide-rich sediments accumulated above the igneous basement by mixing of hydrothermal and pelagic sediment. Basaltic volcanism was followed by a hiatus of up to 15 million years as a result of topographic isolation or sediment bypassing. Variably tuffaceous deep-sea sediments were deposited during Oligocene to early Miocene and from mid-Miocene to Pleistocene. The sediments ponded into extensional fault-controlled basins, whereas condensed sediments accumulated on a local basement high. Oligocene nannofossil ooze accumulated together with felsic tuff that was mainly derived from the nearby Izu–Bonin arc. Accumulation of radiolarian-bearing mud, silty clay, and hydrogenous metal oxides beneath the carbonate compensation depth (CCD) characterized the early Miocene, followed by middle Miocene–Pleistocene increased carbonate preservation, deepened CCD and tephra input from both the oceanic Izu–Bonin arc and the continental margin Honshu arc. The Izu–Bonin forearc basement formed in a near-equatorial setting, with late Mesozoic arc remnants to the west. Subduction-initiation magmatism is likely to have taken place near a pre-existing continent–oceanic crust boundary. The Izu–Bonin arc migrated northward and clockwise to collide with Honshu by early Miocene, strongly influencing regional sedimentation.

Description: The holoplanktonic family Miraciidae (Copepoda, Harpacticoida) is revised and a key to the four monotypic genera presented. Amended diagnoses are given for Miracia Dana, Oculosetella Dahl and Macrosetella A. Scott, based on complete redescriptions of their respective type species M. efferata Dana, 1849, O. gracilis (Dana, 1849) and M. gracilis (Dana, 1847). A fourth genus Distioculus gen. nov. is proposed to accommodate Miracia minor T. Scott, 1894. The occurrence of two size-morphs of M. gracilis in the Red Sea is discussed, and reliable distribution records of the problematic O. gracilis are compiled. The first nauplius of M. gracilis is described in detail and changes in the structure of the antennule, P2 endopod and caudal ramus during copepodid development are illustrated. Phylogenetic analysis revealed that Miracia is closest to the miraciid ancestor and placed Oculosetella-Macrosetella at the terminal branch of the cladogram. Various aspects of miraciid biology are reviewed, including reproduction, postembryonic development, vertical and geographical distribution, bioluminescence, photoreception and their association with filamentous Cyanobacteria (Trichodesmium).

Description: The stomach contents of 723 Loligo vulgaris and 440 Loligo forbesi caught in the northwestern Spanish Atlantic waters have been examined. The diets of both species are described and compared. Loligo vulgaris shows 28 different types of prey belonging to four groups (Teleostei, Crustacea, Cephalopoda and Polychaeta) and Loligo forbesi 27 different types of prey belonging to three groups (Teleostei, Crustacea and Cephalopoda). Both species catch similar prey species but in different proportions. Cannibalism was observed in both species. Estimated prey sizes were smaller than squid sizes. No differences in feeding habits of males and females of both species were observed, but females seem to increase food intake during maturation. No significant changes were found in the diet of Loligo vulgaris within the size (DML) range studied (65–465 mm). Importance of cephalopods increased and importance of fish decreased in the diet of Loligo forbesi with growth (65–685 mm). Diet and food intake varied with seasons in both species. Diets of both squids were significantly different. Los contenidos estomacales de 723 Loligo vulgaris y 440 Loligo forbesi capturados en aguas de Galicia (Noroeste de España) fueron examinados. Se describe y compara la dieta de ambas especies. Se identificaron 28 tipos de presa diferentes en Loligo vulgaris que pertenecen a cuatro grupos (Teleostei, Crustacea, Cephalopoda y Polychaeta); y 27 tipos de presa en Loligo forbesi, pertenecientes a tres grupos (Teleostei, Crustacea y Cephalopoda). Ambas especies comen pres as similares, pero en proporciones diferentes. En ambas especies se observó canibalismo. La talla de las presas fue menor que la de los calamares. No se encontraron diferencias en la dieta entre machos y hembras en ambas especies, pero se observó que las hembras incrementan su tasa de ingestión durante la maduración. No se hallaron cambios significativos en la dieta de Loligo vulgaris en función de la talla (DML) dentro del rango de tamanos estudiado (65–465 mm). En Loligo forbesi, los cefalópodos aumentaron y los peces disminuyeron en importancia con la talla (65–685 mm DML). La dieta y la tasta de ingestión de ambas especies varió con la época del ano. Las dietas de ambas especies fueron significativemente diferentes entre sí.

Description: The fluttering shearwater (Puffinus gavia) is an abundant seabird endemic to breeding colonies in northern and central New Zealand. The species remains poorly studied, and here we present the first study to examine its breeding biology in detail. Fluttering shearwater nests were monitored daily from laying in September 2015 to fledging in January 2016 on Burgess Island (Mokohinau Islands group) in the outer Hauraki Gulf, northern New Zealand. Burrows were generally simple and non-branched. Eggs were laid over a period of 39 days with laying peaking 12th September. Incubation was 50 ± 3.7 days and chicks fledged after an average of 74 ± 4.3 days, from late December to the end of January. Chick development corresponds to the pattern observed for other Procellariiformes, gaining body mass rapidly to a maximum of 115% of adult mass, and then losing weight until fledging. Chicks were fed most nights throughout chick-rearing, indicating adult birds have access to a stable food supply close to the colony. Breeding success was 63.8% and similar to other Puffinus species. This study provides baseline biological data for a poorly studied, yet common, New Zealand endemics seabird. The obtained new information will allow for further ecological investigations and improved conservation management for the species

Description: Individual polychlorinated biphenyl (CB) congeners in adipose and whole blood tissues of a capacitor manufacture worker (occupational/accidental exposure) and of the general population were determined. Nondestructive sample cleanup and multidimensional gas chromatography-electron capture detection (MDGC-ECD) techniques were applied. Special attention was given to the toxicologically relevant congeners CB-77, CB-126, CB-169, CB-105, CB-114, CB-118, CB-156, CB-167, and CB-189 (IUPAC). Lipid-based tissue contents of sigma CBs were higher in the occupationally/accidentally exposed worker (adipose = 7,000 ng/g; whole blood = 11 ng/g) than in the general population (adipose = 300 ng/g; whole blood = 1.9 ng/g). Among the non-ortho Cl CBs, CB-77 was below detection limit (〈 1.0 pg/g). The contents of CB-126 for the capacitor manufacture worker were 2,000 and 3 pg/g, and in the general population were 100 and 2 pg/g for adipose and whole blood, respectively. The corresponding data for CB-169 were 3,500 and 4 for adipose and whole blood, respectively, in the exposed worker, and 40 and 2 for adipose and whole blood, respectively, in the general population. Congeners with highest contents were CB-153, CB-138, CB-180, CB-170, and CB-187. These congeners possess chlorine substitution patterns, making them resistant to metabolism. X/153 ratios suggest that both PB and 3-MC type cytochrome P-450 enzymes were induced in the exposed worker, as well as in the general population.

Description: A coupled ocean-atmosphere GCM is being developed for use in seasonal forecasting. As part of the development work, a number of experiments have been made to explore some of the sensitivities of the coupled model system. The overall heat balance of the tropics is found to be very sensitive to convective cloud cover. Adjusting the cloud parameterization to produce stable behaviour of the coupled model also leads to better agreement between model radiative fluxes and satellite data. A further sensitivity is seen to changes in low-level marine stratus, which is under-represented in the initial model experiments. An increase in this cloud in the coupled model produces a small improvement in both the global mean state and the phase of the east Pacific annual cycle. The computational expense of investigating such small changes is emphasized. An indication of model sensitivity to surface albedo is also presented. The sensitivity of the coupled GCM to initial conditions is investigated. The model is very sensitive, with tiny perturbations able to determine El Niño or non-El Niño conditions just six months later. This large sensitivity may be related to the relatively weak amplitude of the model ENSO cycle.

Description: ECHO is a new global coupled ocean-atmosphere general circulation model (GCM), consisting of the Hamburg version of the European Centre atmospheric GCM (ECHAM) and the Hamburg Primitive Equation ocean GCM (HOPE). We performed a 20-year integration with ECHO. Climate drift is significant, but typical annual mean errors in sea surface temperature (SST) do not exceed 2° in the open oceans. Near the boundaries, however, SST errors are considerably larger. The coupled model simulates an irregular ENSO cycle in the tropical Pacific, with spatial patterns similar to those observed. The variability, however, is somewhat weaker relative to observations. ECHO also simulates significant interannual variability in mid-latitudes. Consistent with observations, variability over the North Pacific can be partly attributed to remote forcing from the tropics. In contrast, the interannual variability over the North Atlantic appears to be generated locally.

Description: Glyoxalase is one of two enzymes of the glyoxalase detoxification system against methylglyoxal and other aldehydes, the metabolites derived from glycolysis. The glyoxalase system is found almost in all living organisms: bacteria, protozoa, plants, and animals, including humans, and is related to the class of ‘life essential proteins’. The enzyme belongs to the expanded Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. At present the GenBank contains about 700 of amino acid sequences of this enzyme type, and the Protein Data Bank includes dozens of spatial structures. We have offered a novel approach for structural identification of glyoxalase I protein family, which is based on the selecting of basic representative proteins with known structures. On this basis, six new subfamilies of these enzymes have been derived. Most populated subfamilies A1 and A2 were based on representative human Homo sapiens and bacterial Escherichia coli enzymes. We have found that the principle feature, which defines the subfamilies’ structural differences, is conditioned by arrangement of N- and C-domains inside the protein monomer. Finely, we have deduced the structural classification for the glyoxalase I and assigned about 460 protein sequences distributed among six new subfamilies. Structural similarities and specific differences of all the subfamilies have been presented. This approach can be used for structural identification of thousands of the so-called hypothetical proteins with the known PDB structures allowing to identify many of already existing atomic coordinate entrees.

Description: Morphological variability in gorgonians is frequent and commonly associated with habitat variability, often resulting in segregated morphotypes. Paramuricea macrospina is an endemic Mediterranean gorgonian species found on rocky bottoms between 40 and 160 m depth and has recently been reported as one of the most abundant species in continental shelf and shelf edge environments. Three different chromatic forms of P. macrospina were observed in the Menorca Channel: a yellow form and a light purple form occurring on maërl beds of the continental shelf, and a dark purple form occurring on rocky substrates of the shelf edge. The objective of the present work is to verify if these P. macrospina forms may represent distinct taxonomic units by analysing differences in colony morphology and sclerite size and shape of the three chromatic forms. No significant differences were found in colony shape, suggesting that environmental variability between the continental shelf and the shelf edge is not influential enough to significantly alter colony morphology. Significant differences in sclerite size and shape were found amongst all forms, suggesting that sclerites may be influenced by environmental conditions. However, the co-occurrence of the yellow and light purple forms side by side on the continental shelf may indicate a certain degree of genetic differentiation.

Description: The feeding habits of two sympatric squid species, Uroteuthis (Photololigo) chinensis and Uroteuthis (Photololigo) duvaucelii from the southwestern Gulf of Thailand were studied. They fed on low numbers of food types (AF) and had a low diet breadth; 1.18 and 0.01 for U. (P.) chinensis and 1.49 and 0.05 for U. (P.) duvaucelii, respectively. Three major prey types (fishes, crustaceans and molluscs) were always detected and cannibalism was observed. Fish was the greatest contributor to the diet of both species, contributing 89.5% for U. (P.) chinensis and 69.9% for U. (P.) duvaucelii. Fish size significantly affected fullness index (FL) and AF for U. (P.) chinensis (P 〈 0.001) and U. (P.) duvaucelii (P 〈 0.001). Depth affected the FL of U. (P.) chinensis (P 〈 0.001) but not of U. (P.) duvaucelii (P 〉 0.05). Maturity stages of both male and female U. (P.) chinensis influenced FL (male: P 〈 0.001; female: P 〈 0.05) and AF (male: P 〈 0.05; female: P 〈 0.01). The FL of squid from cast nets was higher than those from trawls. The multivariate results showed dietary grouping between size classes of both species.

Description: Indian squid, Uroteuthis (Photololigo) duvaucelii (Loliginidae) constitute an important component of the inshore cephalopod fisheries along the eastern Arabian Sea. Local environmental variation plays an important role in species–environment interactions in neritic squids, which inhabit nearshore/coastal waters. Such ‘active’ and ‘passive’ responses of squids to environmental changes is crucial in understanding their relationships and influence on the biological processes, distribution and abundance of the fast-growing short-lived coastal loliginids. The empirical relationship between squid abundance and the variability in rainfall and sea surface temperature (SST) were explored in a tropical monsoon fishery. Monthly catch rates (catch per fishing hour) of squids in commercial trawl during 1987–2009 were used as the abundance index. Linear regression models with ARIMA errors were fitted with catch per unit hour time series as dependent variable and rainfall and SST as exogenous variables. While rainfall was observed to have a negative effect on squid abundance, the SST recorded a positive impact. ARIMA models provided satisfactory fit to observed data and forecast of 22 months. Given that the squid life-cycle is a function of their environment, this result is relevant in forecasting squid biomass for the management of tropical monsoon fisheries.

Description: The distribution pattern of purpleback flying squid and the relationship between its abundance and environmental variables in the south-eastern Arabian Sea were analysed using a geographical information system (GIS) and a generalised additive model (GAM). Highest abundances were observed during December and January within 10 and 13°N and 71 and 72°E around the Lakshadweep Islands. The mean abundance in the area was 4.21 tonnes/km2 and the maximum sustainable yield (MSY) was estimated as 0.63 million tonnes. GAM indicated that very high squid abundance was associated with low values of dissolved oxygen (6.01–6.27 mg/L), sea surface temperature (28.03–28.62°C), pH (7.75–8.56), salinity (30.42–34.48 psu), chlorophyll-a (0.4–0.6 mg/m3), zooplankton biomass (0.23–0.64 mL/m3), and shallow 20°C isotherm (101.2–134.7 m) and mixed layer depth (17.8–29.8 m). As a carnivore from paralarval stages, S. oualaniensis depends on secondary and tertiary production to sustain its population for which primary production is used up. In the tropical Arabian Sea where temperature differences are not so pronounced, S. oualaniensis distribution was found to be related to a low but very narrow sea surface temperature (SST) band. There is sufficient fishable biomass in the area to possibly launch a new targeted oceanic squid fishery from the western seaboard of India.

Description: The environmental system of the northern Nordic Seas is very sensitive to oceanographic and climatic changes at the contact of cold Arctic and warmer North Atlantic waters. These contrasts are reflected in the associations of marine microorganisms and archived in the bottom sediments. A microfossil study (diatoms, coccoliths) of late Holocene sediments in core MSM5/5-712-1 from the eastern Fram Strait provides a better understanding of marine ecosystems and palaeoenvironments during Arctic warming events of the last two millennia. Indicative diatom species and groups of species revealed a high variability of sea-surface conditions. Based on the diatom distribution, three warming periods could be detected, corresponding to the time intervals of 0 to 440 CE (the later part of the Roman Warm Period), 1200 to1420 CE (the final part of the Medieval Climate Anomaly) and 1730 CE to present (including the Recent Warming). The various micropalaeontological proxies used in this study and other publications describe the Roman Warm Period and, especially, the Recent Warming as the most pronounced warm events in the area during the last 2000 years. A comparison of data from the different microfossil groups, indicators of sea-surface and subsurface conditions, reveals variable, complicated and non-simultaneous palaeoenvironmental signals within the warm periods. This can potentially be explained by changes in the surface/subsurface water structure during the events (variations in the cold/warm water advection, stratification, availability of nutrients, seasonal succession of bioproductivity, etc.), which are reflected by changes in the microplankton communities.

Description: Microplastic contamination of aquatic environments has become an increasingly alarming problem. These, defined as particles 〈5 mm, are mostly formed due to the cracking and embrittlement of larger plastic particles. Recent reports show that the increasing presence of microplastics in the environment could have significant deleterious consequences over the health of marine organisms, but also across the food chain. Herein, we have studied the effects of artificial seawater on polyethylene (PE)-based beads by exposing them up to eight weeks to saltwater in stirred batch reactors in the dark and examined the structural and morphological changes these endured. Electron microscopy observations showed that artificial seawater induces severe microcracking of the pellets' surfaces. Additionally, Fourier transform infrared spectroscopy (FTIR) analyses evidenced the formation of oxidized groups whenever these particles were exposed to water and an increase in organic matter content of the waters in which the pellets were kept was evidenced by Raman spectroscopy. There were also noticeable consequences in the thermal stability of the polyethylene pellets, as determined by thermogravimetric studies (TGA). Furthermore, the parallel exposure of polyethylene pellets to UV radiation yielded less pronounced effects, thus underscoring its lower preponderance in the degradation of this material. These results highlight the importance of determining the mechanisms of degradation of microplastics in marine settings and what the implications may be for the environment. Overall, the herein presented results show that a relatively short period of time of accelerated exposure can yield quantifiable chemical and physical impacts on the structural and morphological characteristics of PE pellets.

Description: This paper describes the evolution of the former Tethys ocean in terms of successive positions of the involved plates, their boundaries, and the oceanic and continental elements they bore. Most of the past positions for the major continents are obtained from published data on the kinematics of the Atlantic and Indian oceans. As they do not cover the complete time span and area under study, additional solutions for the missing parts are proposed on the basis of paleomagnetic and geologic data. A revised reconstruction of Eastern Gondwana and a reappraisal of the early history of the Indian ocean is presented, as well as a discussion of the Pangea megashear concept which applies to the relations between Gondawa and Laurussia during latest Palaeozoic to Mid-Triassic times. Past positions of continental blocks, basins and associated plate boundaries within the now disappeared Tethys ocean, are determined through the kinematic inversion of the Alpine chains interpreted in terms of break-up, oceanic spreading and drift, subduction and collision. A quantitative solution is obtained by associating Eulerian rotation parameters to any relative displacement, computing their combination, then adjusting until a complete coherency through time and space is obtained. Our method puts emphasis on the former positions of the plate boundaries in the Tethys, and stresses the drastically different organisation of Tethys west and east of a fundamental triple junction located in its Mediterranean part. A symmetric Atlantic part of Tethys, governed by a mid-ocean diverging boundary, was thus linked eastwards to an asymmetric “Transit” part of Tethys where southern diverging boundaries and northern converging boundaries defined a Transit plate (or group of plates). Besides several reorganisations through southward shift of these boundaries, the successive (or coeval) transit plates systematically exhibited the same north-south asymmetry responsible for the northward migration of the various continental blocks they carried, which were successively detached from Gondwana to become accreted to Eurasia. The transit process, while an essential element of the Tethyan tectonic pattern, was not restricted to lifetime of Tethys, as it is still active nowadays and was already active during the Palaeozoic. Nevertheless, its association with the Atlantic Tethys diverging boundary is typical for the lifetime of Tethys, both constituting a “Tethys plate pattern”, in opposition to the present-day and to Hercynian “Anti-Tethys plate pattern” where a converging boundary is and was associated with the transit plate system. Two pre-eminent tectonic events, the Late Triassic switchover from the Anti-Tethys pattern to the Tethys pattern, and the Late Cretaceous switchover back to the Anti-Tethys pattern, decided birth and death of the Tethys ocean.

Description: Site fidelity and dispersal of juvenile and sexually mature adults was investigated at the largest southern African gannetry on Bird Island, Algoa Bay, where a minimum of 65000 airs occupy approximatel 2 ha at a mean density of 2,85 nests per m2. Based on 512 ring recoveries and live retraps of known-aged birds of this colony, immature and non-breeding adult gannets dispersed widely along the coasts o Africa, reaching Maputo Bay (southern Mozambique) on the eastern side of the continent and the Namibian Skeleton Coast on the western side. Very few birds flew farther. There were conspicuously few ring recoveries at 400–500 km straight-line distance east from Bird Island, corresponding with the Pondoland coast in Transkei. A similar drop was observed in the west for the Tsitsikamma coast and the stretch of coast from Cape St. Blaize to Cape Infanta. In these regions reporting by members of the public is presumed to be low. either because the rocky coast is inaccessible or because of socioeconomic reasons. The geographical spread of the ring recoveries suggested a possible range contraction of the species between the 1950's and the period 1978–1993 but the nature of the data prevented a test of this hypothesis. No evidence was found that gannets from Bird Island breed or roost at other southern African colonies as a matter of habit. On the contrary, all survivors of post-fledgling dispersal eventually returned to their native colony, where they exhibited pronounced fidelity to the site where they hatched from the egg. Based on multiple retraps of 862 known-age individuals, 71.7 % of young adults took over vacant sites in the immediate vicinity of their original nest, 8,1% moved once but were faithful to their new site and in 20,2% of all cases faithfulness to the original site could not be shown. Moreover, in subsequent years edge birds did not vacate their sites to move towards the center, refuting the hypothesis that fringes are physically inferior breeding sites.

Description: This article introduces a resampling procedure called the stationary bootstrap as a means of calculating standard errors of estimators and constructing confidence regions for parameters based on weakly dependent stationary observations. Previously, a technique based on resampling blocks of consecutive observations was introduced to construct confidence intervals for a parameter of the m-dimensional joint distribution of m consecutive observations, where m is fixed. This procedure has been generalized by constructing a “blocks of blocks” resampling scheme that yields asymptotically valid procedures even for a multivariate parameter of the whole (i.e., infinite-dimensional) joint distribution of the stationary sequence of observations. These methods share the construction of resampling blocks of observations to form a pseudo-time series, so that the statistic of interest may be recalculated based on the resampled data set. But in the context of applying this method to stationary data, it is natural to require the resampled pseudo-time series to be stationary (conditional on the original data) as well. Although the aforementioned procedures lack this property, the stationary procedure developed here is indeed stationary and possesses other desirable properties. The stationary procedure is based on resampling blocks of random length, where the length of each block has a geometric distribution. In this article, fundamental consistency and weak convergence properties of the stationary resampling scheme are developed.

Description: A large, discrete aggregation of squid was sampled at short intervals by means of jigging, midwater trawling and purse-seining. Differences among basic parameters of the population (e.g. length frequency) indicate that jigging is a more selective, and therefore biased, method of sampling than midwater trwaling or purse-seining. This has important consequences for stock assessments that take commercial catches into account. The selectivity curve indicates that squid of mantle lenghts (ML) 28-33cm are over-represented (in terms of the situation in the population) in fisheries conducted by jigging and that squid 〈26 and 〉34cm ML are under-represented if purse-seine results are considered to be representative of the population.

Description: A large number of remarkable studies on the secondary metabolites of fungi have been conducted in recent years. This review gives an overview of one hundred and sixty-seven molecules with novel skeletons and their bioactivities that have been reported in seventy-nine articles published from 2013 to 2017. Our statistical data showed that endophytic fungi and marine-derived fungi are the major sources of novel bioactive secondary metabolites.

Description: The occurrence and distribution of dinoflagellate resting cysts in Recent sediments was investigated at 9 locations in Kiel Bight, Baltic Sea. The assemblage comprised 25 known cyst species and 4 unknown cyst types and is characterized by the dominance of Protoperidinium cf. divergens with a maximal abundance of 1695 living cysts/cm3 in the upper half centimeter. Cysts of the potentially toxic dinoflagellates of the Alexandrium excavatum/tamarense group and A. minutum were scarce. Micro-reticulate resting cysts of the toxic, unarmoured Gymnodinium catenatum, whose motile cell has not been recorded in Northern European waters, are reported for the first time from Recent sediments of the Baltic Sea. In the top 2-cm of sediment up to 1200 living dinoflagellate cysts/cm3 were found and the following trends were noted: Cysts were primarily associated with sediments dominated by mud, sandy stations exhibited the lowest cyst abundance. Highest cyst concentrations were found at the deepest stations and the small-scale vertical distribution ofcysts usually exhibited maximum concentrations below the sediment surface. Empty cysts constituted 16.5–64.0% of total cyst abundance. These results suggest that the spatial distribution of several cyst species is controlled by water circulation patterns. The wide distribution ofliving and empty cysts of Peridinium dalei, Protoperidinium denticulatum and P. punctulatum and corresponding germination experiments suggest that the motile forms, which have not previously been recorded in the area, are common members of the plankton community in the western Baltic Sea. The cysts of Gonyaulax polyedra, P. dalei and Protoceratium reticulatum exhibited a reduced length of processes compared to individuals from marine habitats.

Description: In situ caging experiments showed that both littorinid snails and gammarid amphipods exerted minimal effects on the suite of algae comprising the canopy of littoral fringe tide pools dominated by Fucus distichus. In the absence of grazers, the Fucus canopy was dramatically reduced by fatal endophyte infections. Among the 10dependent variables making up the algal species and forms at the substratum level below the canopy, 3 were highly affected by grazing. The germlings of F. distiehus were greatly reduced by littorinids. Gamrnarids also reduced germling cover, but were less effective. In addition, the two grazer guilds interactively reduced the cover of algae belonging to the Uniseriate functional form at the substratum level. Sheet/Tube form algae were reduced in cover only by littorinids. Other forms, including calcareous crusts, thalli of Chondrus crispus and 3 Cladophora species were unaffected by grazing. There was no indication of food resource partitioning between littorinids and gammarids.

Description: As an important DNA source, herbarium specimens have been widely used in plant phylogenetics due to their easy accessibility and richness. However, contamination is a constant risk owing to low quality and/or quantity of DNA extracted from old samples. The inclusion of contaminant sequences can mislead phylogenetic reconstruction, and thereby affect subsequent analyses, such as divergence time estimates and biogeographic inferences. To employ appropriately herbarium specimens in plant phylogenetics, we outline here several suggestions regarding DNA extraction, PCR amplification and sequencing. We hope that these suggestions will serve as a guide for researchers using herbarium specimens in plant phylogenetics and help them identify from the early steps potential contaminant sequences from other plants or other organisms.

Description: The feeding habits of two sympatric squid species, Uroteuthis (Photololigo) chinensis and Uroteuthis (Photololigo) duvaucelii from the southwestern Gulf of Thailand were studied. They fed on low numbers of food types (AF) and had a low diet breadth; 1.18 and 0.01 for U. (P.) chinensis and 1.49 and 0.05 for U. (P.) duvaucelii, respectively. Three major prey types (fishes, crustaceans and molluscs) were always detected and cannibalism was observed. Fish was the greatest contributor to the diet of both species, contributing 89.5% for U. (P.) chinensis and 69.9% for U. (P.) duvaucelii. Fish size significantly affected fullness index (FL) and AF for U. (P.) chinensis (P 〈 0.001) and U. (P.) duvaucelii (P 〈 0.001). Depth affected the FL of U. (P.) chinensis (P 〈 0.001) but not of U. (P.) duvaucelii (P 〉 0.05). Maturity stages of both male and female U. (P.) chinensis influenced FL (male: P 〈 0.001; female: P 〈 0.05) and AF (male: P 〈 0.05; female: P 〈 0.01). The FL of squid from cast nets was higher than those from trawls. The multivariate results showed dietary grouping between size classes of both species.

Description: Iron is required for microbial growth and proliferation. To survive in low-iron environments, some microorganisms secrete ferric iron chelators called siderophores. Siderophore biosynthesis occurs via two pathways: the non-ribosomal peptide synthetase (NRPS) pathway and the NRPS-independent siderophore (NIS) synthetase pathway. NIS enzymes function by adenylating a carboxylic acid substrate, typically citrate, or a derivative, followed by nucleophilic capture of an amine or alcohol and displacement of a citryl intermediate. In this review, we summarize recent advances in NIS biochemistry with a particular focus on structural biology and confirm the classification of NIS enzymes into Types A, A', B, and C based on substrate specificity. Based on a phylogenetic analysis, we also propose a new subclass of NIS enzymes, Type C', responsible for dimerization and macrocyclization of complex and substituted amine or amide intermediates. Finally, we describe the role of NIS enzymes in virulence of pathogenic microbes and discuss NIS inhibitors as potential anti-microbial agents.

Description: Long-range global climate forecasts have been made by use of a model for predicting a tropical Pacific sea surface temperature (SST) in tandem with an atmospheric general circulation model. The SST is predicted first at long lead times into the future. These ocean forecasts are then used to force the atmospheric model and so produce climate forecasts at lead times of the SST forecasts. Prediction of the wintertime 500mb height, surface air temperature and precipitation for seven large climatic events of the 1970 1990s by this two-tiered technique agree well in general with observations over many regions of the globe. The levels of agreement are high enough in some regions to have practical utility.

Description: Hydrothermal precipitates and hydrothermal alteration products could record important information about temporal variations of seafloor hydrothermal systems. Geochemistry, mineralogy, and microscopic features of three pumice samples (T3-1, T3-2, and T3-3) near the Iheya North hydrothermal field were analyzed in this article. The results show that T3-3 sample has undergone at least two-stage influences by hydrothermal fluids. In the first stage, pure amorphous silica from hydrothermal fluid precipitated in the vesicles of all three T3 samples as a result of conductive cooling and fluid–seawater mixing. The precipitation temperatures according to oxygen isotope thermometer are approximately 13–21°C. In the second stage, T3-3 pumice underwent low-temperature hydrothermal alteration, during which the amorphous silica precipitates were redissolved, together resulting in losses of FeO and SiO2 and gains of MgO, Pb, Zn, and Cu. Furthermore, ferruginous filamentous silica, which might be related to activities of Fe-oxidizing bacteria, was formed in the altered pumice. The transformation from pure amorphous silica precipitation to redissolution of the silica in T3-3 pumice might indicate a rise of temperature and/or decrease in silica concentrations in hydrothermal fluids, implying a changing hydrothermal environment.

Description: We propose a geochemical parameter, “metal flux” in evaluating hydrogenetic Co-rich ferromanganese crust deposits in the Pacific seamount area, that is based on physical, chemical, and geological characterization of the integrated growth piles of crusts. We calculated the metal flux for fifteen sites from different depths ranging between 900-6000m from different seamounts. The secular and areal variations of metal flux indicate a strong geological controls, and also can be a reliable tool for estimating an economic potential of the crusts. The Co flux decreases with increasing water depth, followed by almost constant flux of Ni and Mn. The Al and Fe fluxes vary with regions, indicating higher values in the western regions near the island arc probably related to a supply from the Asian continents. The results imply that Co, a redox sensitive metal element, is controlled by redox conditions of seawater, while Fe and Al are by terrigenous input. The metal flux reflects global and regional conditions and controls the compositional diversity of metals, thus consequently, the parameter can be a reliable powerful tool to estimate or single out more potential areas.