ALBERT

Description: Oogenesis in four commercial Caribbean sponge species, Hippospongia lachne, Spongia barbara, S. cheiris and S. graminea, was studied using light and transmission electron microscopy. Eggs and embryos develop asynchronously in localized endosomal nurseries of these viviparous and gonochoristic species. Statistical analyses of specific morphological characteristics of reproductive elements have unequivocally identified four specific stages in the process of oogenesis. Oogonia undergo mitotic division to produce primary oocytes. Meiotic division occurs producing secondary oocytes which are fertilized before zygotes undergo major growth by phagocytosis and the transfer of nutrients through cytoplasmic bridges. During cleavage of the zygote, umbilici form between embryos and nurse cell layers and these function in the transfer of symbiotic bacteria and other mesohyl substances from the maternal parent to the embryo. These symbionts were observed dispersed between blastomeres of all young and maturing embryos and between internal cells of cytodifferentiated parenchymella larvae. Extracellular transfer of symbiotic bacteria from maternal tissues to developing embryos has not been reported in any other viviparous invertebrate.

Description: Before 1985, Martialia hyadesi (Cephalopoda: Ommastrephidae) in the Pacific Ocean was known only from the Eltanin Fracture Zone and Macquarie Island. A joint Japan‐New Zealand squid survey around New Zealand captured many immature ommastrephid squids. Gel electrophoresis confirmed the presence of immature M. hyadesi. Aspects of the external morphology are described. The distinctive tentacle club was evident in the smallest specimen examined, 19 mm dorsal mantle length (ML). Arm trabeculae were first evident in specimens of 40–50 mm ML. Immature squid were distributed around and southward of the Subtropical Convergence Zone. The presence of very small squid (〈 10 mm ML) indicated spawning on or near the Auckland Island Shelf.

Description: New biostratigraphical, geochemical, and magnetic evidence is synthesized with IODP Expedition 352 shipboard results to understand the sedimentary and tectono-magmatic development of the Izu–Bonin outer forearc region. The oceanic basement of the Izu–Bonin forearc was created by supra-subduction zone seafloor spreading during early Eocene (c. 50–51 Ma). Seafloor spreading created an irregular seafloor topography on which talus locally accumulated. Oxide-rich sediments accumulated above the igneous basement by mixing of hydrothermal and pelagic sediment. Basaltic volcanism was followed by a hiatus of up to 15 million years as a result of topographic isolation or sediment bypassing. Variably tuffaceous deep-sea sediments were deposited during Oligocene to early Miocene and from mid-Miocene to Pleistocene. The sediments ponded into extensional fault-controlled basins, whereas condensed sediments accumulated on a local basement high. Oligocene nannofossil ooze accumulated together with felsic tuff that was mainly derived from the nearby Izu–Bonin arc. Accumulation of radiolarian-bearing mud, silty clay, and hydrogenous metal oxides beneath the carbonate compensation depth (CCD) characterized the early Miocene, followed by middle Miocene–Pleistocene increased carbonate preservation, deepened CCD and tephra input from both the oceanic Izu–Bonin arc and the continental margin Honshu arc. The Izu–Bonin forearc basement formed in a near-equatorial setting, with late Mesozoic arc remnants to the west. Subduction-initiation magmatism is likely to have taken place near a pre-existing continent–oceanic crust boundary. The Izu–Bonin arc migrated northward and clockwise to collide with Honshu by early Miocene, strongly influencing regional sedimentation.

Description: Sexual reproductive cycles of a Florida, U.S.A., population of four Caribbean commercial sponge species, Hippospongia lachne, Spongia barbara, S. cheiris and S. graminea, were determined by analysis of tissue samples collected over a three-year period. Spermatogenesis in these species was studied using light and transmission electron microscopy. The production of male gametes occurs in cysts within the endosomal tissue of mature specimens. Reproductive elements within an individual cyst develop synchronously while development between cysts is asynchronous. All available evidence suggests that these species are dioecious. Spermatogonia differentiate directly from choanocytes in situ. All cells of the chamber lose their collars and flagella and undergo mitosis to produce primary spermatocytes, each possessing a single flagellum. The ratio of nucleus to cell diameter in these cells is almost double that of choanocytes. Circumstantial evidence suggests that primary spermatocytes undergo meiosis to produce four spermatids, but confirmational chromatid linkage figures are still lacking. The mature spermatozoa lack both intermediate segments and acrosomes. Male gametes displayed a bright yellow-white autofluorescence when excited with blue light (460–485 nm).

Description: Squid on their spawning grounds feed mainly at night when they are more dispersed. In all, 28,5 per cent of squid sampled at night had food in their stomachs, whereas only 6,7 per cent of those collected by day had food. Most stomachs contained only a single prey species (90,8% of those analysed). Teleosts dominated the prey of squid collected at night (58%M), followed by crustaceans (25%), polychaetes (9%) and cephalopods (3%). By day the prey was dominated by cephalopods (61%), followed by teleosts (20%), crustaceans (14%) and polychaetes (2%). Bregmaceros sp. was the most frequently identified teleost, Loligo vulgaris reynaudii (cannibalism) the dominant cephalopod, ?Betaeus sp. (Alpheidae; pieces of coral were also found) the commonest crustacean and Nereis sp. the commonest polychaete. There were seasonal differences in the diet too: squid caught during summer seemed to have similar proportions of the four main prey components. Also, the incidence of feeding was higher than in winter. There were, however, no significant differences in stomach mass expressed as a percentage of body mass between day and night nor between season nor between sexes. The average stomach mass of all samples was 0,6 per cent of body mass, less than on the feeding grounds, where it is generally about 2 per cent.

Description: The enoploteuthid cephalopod Abraliopsis lineata is re-described and its generic position discussed. Specimens for the present study were captured during the Indian Ocean Expedition of RV Meteor in 1987, where the species occurred in considerable numbers. The geographical distribution of A. lineata is described and discussed. The detailed analysis of the photophore pattern of the present specimens differs from the original description. The diagnostic features in the male, especially the structure of the hectocotylus which separates A. lineata easily from the members of the subgenus Pfefferiteuthis, are outlined. The morphological differences which separate A. lineata from A. gilchristi, the only other member of the subgenus Micrabralia, are summarized.

Description: Larval behaviour, settlement, and metamorphosis were investigated in four Caribbean commercial sponges, Hippospongia lachne, Spongia barbara, S. cheiris and S. graminea, using light and transmission electron microscopy. The parenchymella larvae of these viviparous and gonochoristic species have an average size of 350 μm by 420 μm when released. Symbiotic bacteria occur intercellularly in both larvae and post-larvae. Laboratory behavioural studies demonstrate that free-swimming larvae display directional swimming with constant lateral rotation and negative phototaxis. Larval settlement occurs 26–56 hours after release from the parent and involves the formation of a basal lamella between the post-larva and substrate. There is no evidence of larval substrate selection by type or orientation. The canal system begins to form six days after settlement and oscules are apparent eleven days post-settlement. Available evidence suggests that larval ciliated epithelial cells are terminally differentiated and do not appear to contribute to formation of post larva or adult in this group of Porifera.

Description: To evaluate the feasibility of feeding Sepia officinalis on artificial food, a food pellet consisting of Palaemon serratus powder and alginate as binding agent was developed and tested. Six of seven cuttlefish clearly ingested the artificial food during the ten days it was supplied.

Description: Knowledge concerning biology of two loliginids and three sepiids which are found in the Japanese waters was reviewed including unpublished information of the authors. The swordtip squid, Photololigo edulis, is one of the most important resources for the coastal fisheries of Kyushu and the prefectures facing the southwest Japan Sea. This species is the only species of genus Photololigo found along the Japanese mainland coast and is easily distinguished from other loliginids, by the light organs on the ink sac. The species is distributed from southern Japan to the Red Sea. The spawning season extends throughout the year. Egg cases are laid in clusters on the sandy bottom. The life span is about one year. In the juvenile stage they feed on Crustacea and after reaching pre‐maturity they prey mainly on fish, but many have empty stomachs. Most catches are made by jigging and trawler. The fishing season extends throughout the year. The fishing grounds are widely spread over the continental shelf. Annual catches are around 25 000 metric tonnes. Although this level varies from year to year, it is fairly stable. Fishing has probably little effect on the stocks. The spear squid, Heterololigo bleekeri, can be easily distinguished from other loliginids by its shorter tentacles. The species is endemic in the Far East waters. The stocks are larger in the north. The spawning season is winter in south Japan, and from spring to early summer in north Japan. Egg cases are laid beneath the undersurfaces of firm substances. The life span is about one year. Its feeding behaviour is similar to that of the swordtip squid. Catches are made mainly with bottom trawler and fixed nets from autumn to spring. Annual landings fluctuate widely from year to year. Several prefectures along the northern Japan Sea coast are promoting the large scale development of artificial spawning beds of the species to increase the stocks. The three sepiids, golden cuttlefish. Sepia esculenta, kisslip cuttlefish. Sepia lycidas, and spineless cuttlefish, Sepiella japonica are important in mainland Japan. Those three spawn from spring to early summer in the innermost waters of semi‐enclosed inlets. Eggs are laid in batches of 50–300 every day for 3–4 days followed by a rest period of 1–2 days. This pattern is repeated until several thousands of eggs have been laid. The life span of Sepia esculenta and Sepiella japonica is one year. They feed mainly on decapod crustaceans and fish but as growth proceeds the proportion of fish increases. They are fished mainly by cuttlefish trap and beam trawler. In the early 1960s annual landings were 20 000 metric tonnes but since 1980 catches have decreased below 10 000 metric tonnes. Of the three species, the stock of Sepiella japonica is the most fluctuable. Judging from the result of the stock assessment studies on Sepiella japonica in the western Inland Sea, their stocks have been over‐exploited.

Description: The fluttering shearwater (Puffinus gavia) is an abundant seabird endemic to breeding colonies in northern and central New Zealand. The species remains poorly studied, and here we present the first study to examine its breeding biology in detail. Fluttering shearwater nests were monitored daily from laying in September 2015 to fledging in January 2016 on Burgess Island (Mokohinau Islands group) in the outer Hauraki Gulf, northern New Zealand. Burrows were generally simple and non-branched. Eggs were laid over a period of 39 days with laying peaking 12th September. Incubation was 50 ± 3.7 days and chicks fledged after an average of 74 ± 4.3 days, from late December to the end of January. Chick development corresponds to the pattern observed for other Procellariiformes, gaining body mass rapidly to a maximum of 115% of adult mass, and then losing weight until fledging. Chicks were fed most nights throughout chick-rearing, indicating adult birds have access to a stable food supply close to the colony. Breeding success was 63.8% and similar to other Puffinus species. This study provides baseline biological data for a poorly studied, yet common, New Zealand endemics seabird. The obtained new information will allow for further ecological investigations and improved conservation management for the species

Description: The model presented here provides an explanation of the rapid response of atmospheric CO2 to increasing solar insolation. In the glacial ocean, during periods of slow, deep water renewal, when less oxygen is supplied to the deep ocean and into sediments, manganese oxide in the sediments is reduced and forms soluble MnCO3 and stays in the water column. The dissolved Mn-carbonate should then reach a concentration of ≥ 10µMol/liter, approximately 5,000 to 104 times larger than it is at present. This is the mode prevailing until deep water formation at high latitudes starts again. As soon as the balance between oxygen and organic matter becomes oxidizing once more, the deposition of MnO2 recommences. Oxidation of dissolved Mn2+CO3 to Mn4+O2 which is a spike of acidity to the ocean, rapidly lowers the CO3−− concentration in the water column and enhances release of CO2 to the atmosphere, producing the observed events of CO2 increase at the transitions from glacials to interglacials. The surprising conclusion is that the oceanic (redox-) cycle of a minor element may have had a major impact on Earth's climate.

Description: The role of substratum surface tension on the colonization process (fouling) on artificial substrata was investigated in Kiel Bay (Western Baltic). The density of organisms from the major groups (bacteria, microalgae, protozoa, macroorganisms) was monitored on test panels after several exposure intervals in two experimental series. The results showed that substrata with a surface free energy of 24 mN/m were initially less densely colonized by representatives of the different fouling groups. The most hydrophobic substrata and those between 31–43 mN/m were heavily colonzied but there was a slight decrease in density towards the most hydrophilic material (glass). After an immersion time of 64 d these differences were not apparent for bacteria, microalgae or protozoa. These results correspond with thermodynamic predictions, which propose minimum bioadhesion on substrata with critical surface tensions between 20–25 mN/m in seawater. In addition, factors other than the surface tension may be important in marine fouling.

Description: Glyoxalase is one of two enzymes of the glyoxalase detoxification system against methylglyoxal and other aldehydes, the metabolites derived from glycolysis. The glyoxalase system is found almost in all living organisms: bacteria, protozoa, plants, and animals, including humans, and is related to the class of ‘life essential proteins’. The enzyme belongs to the expanded Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. At present the GenBank contains about 700 of amino acid sequences of this enzyme type, and the Protein Data Bank includes dozens of spatial structures. We have offered a novel approach for structural identification of glyoxalase I protein family, which is based on the selecting of basic representative proteins with known structures. On this basis, six new subfamilies of these enzymes have been derived. Most populated subfamilies A1 and A2 were based on representative human Homo sapiens and bacterial Escherichia coli enzymes. We have found that the principle feature, which defines the subfamilies’ structural differences, is conditioned by arrangement of N- and C-domains inside the protein monomer. Finely, we have deduced the structural classification for the glyoxalase I and assigned about 460 protein sequences distributed among six new subfamilies. Structural similarities and specific differences of all the subfamilies have been presented. This approach can be used for structural identification of thousands of the so-called hypothetical proteins with the known PDB structures allowing to identify many of already existing atomic coordinate entrees.

Description: Morphological variability in gorgonians is frequent and commonly associated with habitat variability, often resulting in segregated morphotypes. Paramuricea macrospina is an endemic Mediterranean gorgonian species found on rocky bottoms between 40 and 160 m depth and has recently been reported as one of the most abundant species in continental shelf and shelf edge environments. Three different chromatic forms of P. macrospina were observed in the Menorca Channel: a yellow form and a light purple form occurring on maërl beds of the continental shelf, and a dark purple form occurring on rocky substrates of the shelf edge. The objective of the present work is to verify if these P. macrospina forms may represent distinct taxonomic units by analysing differences in colony morphology and sclerite size and shape of the three chromatic forms. No significant differences were found in colony shape, suggesting that environmental variability between the continental shelf and the shelf edge is not influential enough to significantly alter colony morphology. Significant differences in sclerite size and shape were found amongst all forms, suggesting that sclerites may be influenced by environmental conditions. However, the co-occurrence of the yellow and light purple forms side by side on the continental shelf may indicate a certain degree of genetic differentiation.

Description: The feeding habits of two sympatric squid species, Uroteuthis (Photololigo) chinensis and Uroteuthis (Photololigo) duvaucelii from the southwestern Gulf of Thailand were studied. They fed on low numbers of food types (AF) and had a low diet breadth; 1.18 and 0.01 for U. (P.) chinensis and 1.49 and 0.05 for U. (P.) duvaucelii, respectively. Three major prey types (fishes, crustaceans and molluscs) were always detected and cannibalism was observed. Fish was the greatest contributor to the diet of both species, contributing 89.5% for U. (P.) chinensis and 69.9% for U. (P.) duvaucelii. Fish size significantly affected fullness index (FL) and AF for U. (P.) chinensis (P 〈 0.001) and U. (P.) duvaucelii (P 〈 0.001). Depth affected the FL of U. (P.) chinensis (P 〈 0.001) but not of U. (P.) duvaucelii (P 〉 0.05). Maturity stages of both male and female U. (P.) chinensis influenced FL (male: P 〈 0.001; female: P 〈 0.05) and AF (male: P 〈 0.05; female: P 〈 0.01). The FL of squid from cast nets was higher than those from trawls. The multivariate results showed dietary grouping between size classes of both species.

Description: Indian squid, Uroteuthis (Photololigo) duvaucelii (Loliginidae) constitute an important component of the inshore cephalopod fisheries along the eastern Arabian Sea. Local environmental variation plays an important role in species–environment interactions in neritic squids, which inhabit nearshore/coastal waters. Such ‘active’ and ‘passive’ responses of squids to environmental changes is crucial in understanding their relationships and influence on the biological processes, distribution and abundance of the fast-growing short-lived coastal loliginids. The empirical relationship between squid abundance and the variability in rainfall and sea surface temperature (SST) were explored in a tropical monsoon fishery. Monthly catch rates (catch per fishing hour) of squids in commercial trawl during 1987–2009 were used as the abundance index. Linear regression models with ARIMA errors were fitted with catch per unit hour time series as dependent variable and rainfall and SST as exogenous variables. While rainfall was observed to have a negative effect on squid abundance, the SST recorded a positive impact. ARIMA models provided satisfactory fit to observed data and forecast of 22 months. Given that the squid life-cycle is a function of their environment, this result is relevant in forecasting squid biomass for the management of tropical monsoon fisheries.

Description: The distribution pattern of purpleback flying squid and the relationship between its abundance and environmental variables in the south-eastern Arabian Sea were analysed using a geographical information system (GIS) and a generalised additive model (GAM). Highest abundances were observed during December and January within 10 and 13°N and 71 and 72°E around the Lakshadweep Islands. The mean abundance in the area was 4.21 tonnes/km2 and the maximum sustainable yield (MSY) was estimated as 0.63 million tonnes. GAM indicated that very high squid abundance was associated with low values of dissolved oxygen (6.01–6.27 mg/L), sea surface temperature (28.03–28.62°C), pH (7.75–8.56), salinity (30.42–34.48 psu), chlorophyll-a (0.4–0.6 mg/m3), zooplankton biomass (0.23–0.64 mL/m3), and shallow 20°C isotherm (101.2–134.7 m) and mixed layer depth (17.8–29.8 m). As a carnivore from paralarval stages, S. oualaniensis depends on secondary and tertiary production to sustain its population for which primary production is used up. In the tropical Arabian Sea where temperature differences are not so pronounced, S. oualaniensis distribution was found to be related to a low but very narrow sea surface temperature (SST) band. There is sufficient fishable biomass in the area to possibly launch a new targeted oceanic squid fishery from the western seaboard of India.

Description: The environmental system of the northern Nordic Seas is very sensitive to oceanographic and climatic changes at the contact of cold Arctic and warmer North Atlantic waters. These contrasts are reflected in the associations of marine microorganisms and archived in the bottom sediments. A microfossil study (diatoms, coccoliths) of late Holocene sediments in core MSM5/5-712-1 from the eastern Fram Strait provides a better understanding of marine ecosystems and palaeoenvironments during Arctic warming events of the last two millennia. Indicative diatom species and groups of species revealed a high variability of sea-surface conditions. Based on the diatom distribution, three warming periods could be detected, corresponding to the time intervals of 0 to 440 CE (the later part of the Roman Warm Period), 1200 to1420 CE (the final part of the Medieval Climate Anomaly) and 1730 CE to present (including the Recent Warming). The various micropalaeontological proxies used in this study and other publications describe the Roman Warm Period and, especially, the Recent Warming as the most pronounced warm events in the area during the last 2000 years. A comparison of data from the different microfossil groups, indicators of sea-surface and subsurface conditions, reveals variable, complicated and non-simultaneous palaeoenvironmental signals within the warm periods. This can potentially be explained by changes in the surface/subsurface water structure during the events (variations in the cold/warm water advection, stratification, availability of nutrients, seasonal succession of bioproductivity, etc.), which are reflected by changes in the microplankton communities.

Description: Microplastic contamination of aquatic environments has become an increasingly alarming problem. These, defined as particles 〈5 mm, are mostly formed due to the cracking and embrittlement of larger plastic particles. Recent reports show that the increasing presence of microplastics in the environment could have significant deleterious consequences over the health of marine organisms, but also across the food chain. Herein, we have studied the effects of artificial seawater on polyethylene (PE)-based beads by exposing them up to eight weeks to saltwater in stirred batch reactors in the dark and examined the structural and morphological changes these endured. Electron microscopy observations showed that artificial seawater induces severe microcracking of the pellets' surfaces. Additionally, Fourier transform infrared spectroscopy (FTIR) analyses evidenced the formation of oxidized groups whenever these particles were exposed to water and an increase in organic matter content of the waters in which the pellets were kept was evidenced by Raman spectroscopy. There were also noticeable consequences in the thermal stability of the polyethylene pellets, as determined by thermogravimetric studies (TGA). Furthermore, the parallel exposure of polyethylene pellets to UV radiation yielded less pronounced effects, thus underscoring its lower preponderance in the degradation of this material. These results highlight the importance of determining the mechanisms of degradation of microplastics in marine settings and what the implications may be for the environment. Overall, the herein presented results show that a relatively short period of time of accelerated exposure can yield quantifiable chemical and physical impacts on the structural and morphological characteristics of PE pellets.

Description: The methodology for analysis of marine mammal diets may be thought of as a series of choices; about the sampling regime, the type of sample, the processing of samples, the identification of prey remains, the quantification of prey importances, and the estimation of population food consumption. In addition to directed sampling, samples may be obtained directly or opportunisitically and the most frequently used types of sample are gut contents of dead animals, and faeces. Direct observation of feeding may be possible for species living inshore, and humane approaches to sampling (e.g. lavaging) have been succesfully applied to seals, but all methods are subject to bias. Identification of fish prey usually relies on recognition of otoliths, but additional information may be obtained from other hard remains or serological analysis of proteins. Remains of invertebrate prey may also be identified from hard parts. A variety of methods exists for quantifying the importance of prey in marine mammal diets. The most useful currency is probably prey biomass but, for fish, natural variation in otolith size-fish weight relationships makes it difficult to estimate fish weights from otolith size. Also, otoliths are reduced in size or lost during digestion. Notwithstanding these problems, otoliths are widely used. If the diet of a population has been adequately characterised, the amounts of each prey type consumed may be derived from direct or indirect estimates of energy requirements. Ideally the measurements should be taken in the field. Possible improvements in methodology include improved calibrations for otolith measurements, the development of keys and guides to fish bones, and of serological methods for identifying fish proteins. Feeding is normally inferred rather than directly monitored and a means for remote detection of prey ingestion and defaecation would greatly enhance the interpretation of foraging activity. To predict diet choice it is necessary to undertand the underlying behavioural mechanisms. Measurement of the energetic costs of prey capture would be an important step in this direction.

Description: Opportunistically collected information on sea temperature and wind was used in a preliminary investigation of physical factors affecting jigged catches of chokka squid Loligo vulgaris reynaudii. Results revealed sea temperature and wind to be correlated with catches during part of the summer upwelling season (October and December) in 1988. Multiple linear regression analysis confirmed that sea temperature was a highly significant explanatory variable (p = 0,0000) for catches from three boats, as well as for the overall catch. Wind direction also played a significant role (p = 0,0085) in the overall catch. A statistical linear multiple regression model is proposed for each boat and for the total catch. Upwelling events are suggested to play a major role in the availability of squid on the inshore spawning grounds (〈50 m) during summer. With further study, other independent physical variables, such as currents, swell height and turbidity, are likely to be introduced into the proposed model.

Description: The feeding patterns of fish caught on the inshore (〈50 m deep) spawning grounds of chokka squid Loligo vulgaris reynaudii were investigated between November 1988 and September 1990. Fish were sampled by demersal trawl, gillnet, handline and longline. SCUBA was used to observe interactions in situ. Potential predators consisted of 16 species each of teleost and elasmobranch. Of the teleosts, five species preyed on whole squid and one appeared to have scavenged squid fragments. Of the elasmobranchs, 12 species had squid in their stomachs, nine of these with a high incidence (〉33% frequency of occurrence). The squid were in spawning condition when taken and no spent squid were recovered from stomach contents. There was no evidence that squid had been moribund when ingested and no dead or moribund squid were encountered while diving during the two-year study. Cannibalism by squid was observed. Marine mammals and avian predators were rarely sighted on the spawning grounds.

Description: A large number of remarkable studies on the secondary metabolites of fungi have been conducted in recent years. This review gives an overview of one hundred and sixty-seven molecules with novel skeletons and their bioactivities that have been reported in seventy-nine articles published from 2013 to 2017. Our statistical data showed that endophytic fungi and marine-derived fungi are the major sources of novel bioactive secondary metabolites.

Description: As an important DNA source, herbarium specimens have been widely used in plant phylogenetics due to their easy accessibility and richness. However, contamination is a constant risk owing to low quality and/or quantity of DNA extracted from old samples. The inclusion of contaminant sequences can mislead phylogenetic reconstruction, and thereby affect subsequent analyses, such as divergence time estimates and biogeographic inferences. To employ appropriately herbarium specimens in plant phylogenetics, we outline here several suggestions regarding DNA extraction, PCR amplification and sequencing. We hope that these suggestions will serve as a guide for researchers using herbarium specimens in plant phylogenetics and help them identify from the early steps potential contaminant sequences from other plants or other organisms.

Description: The enoploteuthid cephalopod Abraliopsis lineata is re-described and its generic position discussed. Specimens for the present study were captured during the Indian Ocean Expedition of RV Meteor in 1987, where the species occurred in considerable numbers. The geographical distribution of A. lineata is described and discussed. The detailed analysis of the photophore pattern of the present specimens differs from the original description. The diagnostic features in the male, especially the structure of the hectocotylus which separates A. lineata easily from the members of the subgenus Pfefferiteuthis, are outlined. The morphological differences which separate A. lineata from A. gilchristi, the only other member of the subgenus Micrabralia, are summarized.

Description: The feeding habits of two sympatric squid species, Uroteuthis (Photololigo) chinensis and Uroteuthis (Photololigo) duvaucelii from the southwestern Gulf of Thailand were studied. They fed on low numbers of food types (AF) and had a low diet breadth; 1.18 and 0.01 for U. (P.) chinensis and 1.49 and 0.05 for U. (P.) duvaucelii, respectively. Three major prey types (fishes, crustaceans and molluscs) were always detected and cannibalism was observed. Fish was the greatest contributor to the diet of both species, contributing 89.5% for U. (P.) chinensis and 69.9% for U. (P.) duvaucelii. Fish size significantly affected fullness index (FL) and AF for U. (P.) chinensis (P 〈 0.001) and U. (P.) duvaucelii (P 〈 0.001). Depth affected the FL of U. (P.) chinensis (P 〈 0.001) but not of U. (P.) duvaucelii (P 〉 0.05). Maturity stages of both male and female U. (P.) chinensis influenced FL (male: P 〈 0.001; female: P 〈 0.05) and AF (male: P 〈 0.05; female: P 〈 0.01). The FL of squid from cast nets was higher than those from trawls. The multivariate results showed dietary grouping between size classes of both species.

Description: Iron is required for microbial growth and proliferation. To survive in low-iron environments, some microorganisms secrete ferric iron chelators called siderophores. Siderophore biosynthesis occurs via two pathways: the non-ribosomal peptide synthetase (NRPS) pathway and the NRPS-independent siderophore (NIS) synthetase pathway. NIS enzymes function by adenylating a carboxylic acid substrate, typically citrate, or a derivative, followed by nucleophilic capture of an amine or alcohol and displacement of a citryl intermediate. In this review, we summarize recent advances in NIS biochemistry with a particular focus on structural biology and confirm the classification of NIS enzymes into Types A, A', B, and C based on substrate specificity. Based on a phylogenetic analysis, we also propose a new subclass of NIS enzymes, Type C', responsible for dimerization and macrocyclization of complex and substituted amine or amide intermediates. Finally, we describe the role of NIS enzymes in virulence of pathogenic microbes and discuss NIS inhibitors as potential anti-microbial agents.

Description: Hydrothermal precipitates and hydrothermal alteration products could record important information about temporal variations of seafloor hydrothermal systems. Geochemistry, mineralogy, and microscopic features of three pumice samples (T3-1, T3-2, and T3-3) near the Iheya North hydrothermal field were analyzed in this article. The results show that T3-3 sample has undergone at least two-stage influences by hydrothermal fluids. In the first stage, pure amorphous silica from hydrothermal fluid precipitated in the vesicles of all three T3 samples as a result of conductive cooling and fluid–seawater mixing. The precipitation temperatures according to oxygen isotope thermometer are approximately 13–21°C. In the second stage, T3-3 pumice underwent low-temperature hydrothermal alteration, during which the amorphous silica precipitates were redissolved, together resulting in losses of FeO and SiO2 and gains of MgO, Pb, Zn, and Cu. Furthermore, ferruginous filamentous silica, which might be related to activities of Fe-oxidizing bacteria, was formed in the altered pumice. The transformation from pure amorphous silica precipitation to redissolution of the silica in T3-3 pumice might indicate a rise of temperature and/or decrease in silica concentrations in hydrothermal fluids, implying a changing hydrothermal environment.

Description: We propose a geochemical parameter, “metal flux” in evaluating hydrogenetic Co-rich ferromanganese crust deposits in the Pacific seamount area, that is based on physical, chemical, and geological characterization of the integrated growth piles of crusts. We calculated the metal flux for fifteen sites from different depths ranging between 900-6000m from different seamounts. The secular and areal variations of metal flux indicate a strong geological controls, and also can be a reliable tool for estimating an economic potential of the crusts. The Co flux decreases with increasing water depth, followed by almost constant flux of Ni and Mn. The Al and Fe fluxes vary with regions, indicating higher values in the western regions near the island arc probably related to a supply from the Asian continents. The results imply that Co, a redox sensitive metal element, is controlled by redox conditions of seawater, while Fe and Al are by terrigenous input. The metal flux reflects global and regional conditions and controls the compositional diversity of metals, thus consequently, the parameter can be a reliable powerful tool to estimate or single out more potential areas.

Description: A pathogenic species of marine slime mold, Labyrinthula, has been identified as the etiological agent of the present recurrence of wasting disease of eelgrass, Zostera marina. It is also implicated as causing the previous epidemic eelgrass wasting disease that occurred in the 1930s. We propose Labyrinthula zosterae sp. nov. for this pathogen based on its host specificity, cytology, characteristic growth patterns in culture, cell size, color in mass, and aggregation structures.