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  • Atomic, Molecular and Optical Physics
  • 1995-1999  (370)
  • 1985-1989  (275)
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  • 1975-1979  (255)
  • 1940-1944
  • 1995  (370)
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  • 1978  (156)
  • 1975  (99)
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  • 1995-1999  (370)
  • 1985-1989  (275)
  • 1980-1984
  • 1975-1979  (255)
  • 1940-1944
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  • 1
    Electronic Resource
    Electronic Resource
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 9 (1975), S. 1-8 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper a calculation of the static quadrupole polarizabilities and the shielding factors of the atoms and ions of the 2p open shell systems is presented. A fully coupled Hartree-Fock method using the Roothaan formalism is adopted. Calculations have been done for the ground as well as for some valence excited states. An antishielding effect is observed for all the atoms and ions under study.
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  • 2
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 9 (1975), S. 67-74 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A new integral transform function: \documentclass{article}\pagestyle{empty}\begin{document}$$ {\rm exp }\left({{\rm - }\zeta {\rm r}} \right)\int_0^\infty {s(n)r^n dn} $$\end{document} where s(n) is a positive definite shape function, is proposed and investigated. A test on H2+ shows that it does not suffer from the inadequacies of earlier integral transform functions, of the form: \documentclass{article}\pagestyle{empty}\begin{document}$$ r^n \int_0^\infty {c(\zeta ){\rm exp}({{-}\xi r})d\zeta } $$\end{document} where c(ζ) is a positive definite shape function.
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  • 3
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    International Journal of Quantum Chemistry 9 (1975), S. 103-117 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Weyl's eigenvalue theory for ordinary second-order differential equations is discussed for the case of a continuous spectrum. It is demonstrated that the spectral density function obtained from a suitably averaged Green's function, equal to the Weinstein function, can be directly related to the Weyl-Titchmarsh m-function. The explicit connections with scattering theory are derived and it is found that the Weyl and Jost solutions are proportional; the proportionality factor being the reciprocal value of the latter at the origin. The physical interpretation of the complex poles of the spectral density is discussed in relation to Gamow's exponentially growing functions. The advantage of using a formulation that allows for a “perturbation” of boundary conditions is pointed out.
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  • 4
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 9 (1975), S. 149-156 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Combined CI-HY method techniques have been employed in obtaining a 57-term CI-HY wave function with an energy of -14.66632 a.u. A method due to Brown has been adopted for obtaining this wave function and various shorter expansions. A 44-term expansion with an energy of -14.66606 a.u. is analyzed in terms of various pair effects, and qualitative arguments are presented for understanding these effects.
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  • 5
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    International Journal of Quantum Chemistry 9 (1975), S. 229-236 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Mø-Plesset theory, in which electron correlation energy is calculated by perturbation techniques, is used in second order to calculate energies of the ground states of atoms up to neon. The unrestricted Hartree-Fock (UHF) Hamiltonian is used as the unperturbed system and the technique is then described as unrestricted Mø-Plesset to second order (UMP2). Use of large Gaussian basis sets suggests that the limiting UMP2 energies with a complete basis of s, p, and d functions account for 75-84% of the correlation energy. Preliminary estimates of the contributions of basis functions with higher angular quantum numbers indicate that full UMP2 limits give even more accurate total energies.
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  • 6
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    International Journal of Quantum Chemistry 9 (1975), S. 789-795 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A smooth interpolation method for the calculation of Fourier transforms of numerical atomic orbitals is presented and the method is used to calculate two-center overlap integrals. Examples applying various definitions of smoothness are given.
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  • 7
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    International Journal of Quantum Chemistry 9 (1975), S. 825-834 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A general variational principle for transition and density matrices is proposed. The principle is closely related to Rowe's variational treatment of the equations-of-motion method. It permits the simultaneous construction of coupled approximations for two eigenstates, and it is a straightforward extension of the usual variational method.
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  • 8
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    International Journal of Quantum Chemistry 9 (1975), S. 887-900 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper we discuss an extension of the standard multiple scattered wave method for molecular electronic structure calculations to the case of arbitrarily shaped molecules. A general theory is presented where the difficulties arising from the matching problem across an arbitrary boundary are avoided. The secular equation to determine the energy spectrum is obtained and the wave functions are calculated in all regions.
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  • 9
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    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 9 (1975) 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 10
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    International Journal of Quantum Chemistry 9 (1975), S. 969-973 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Reformulation, generalization, and application of Löwdin's symmetric orthonormalization, of orthogonalization of two sets of vectors, and of McWeeny's variational method of a density matrix, etc., by means of an operator for forming ket vectors on which are imposed some conditions, are presented.
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  • 11
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    International Journal of Quantum Chemistry 9 (1975), S. 1055-1067 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Analytical formulas are derived for integrals of the orbit-orbit operator in the Breit-Pauli Hamiltonian. The present method differs from an earlier one in the introduction of a new auxiliary function Gn(a) which is an integral of Shavitt's Fm(t) function. A method for its evaluation is discussed and some numerical examples are given.
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  • 12
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    International Journal of Quantum Chemistry 9 (1975), S. 1109-1112 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A new method is presented for obtaining the spin eigenfunctions of 2n electron systems in the spin state S and MS = 0. Using a modified Young operator the function for the state S, MS ( = S) of the system is first projected out. The projected function is then symmetrized over the last n particles and the weight lowering operator Š-S is then applied to it, resulting in a projection of the state S, 0. To within a multiplicative factor, the resulting function is identical with the one resulting from the vector coupling methods.
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  • 13
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    International Journal of Quantum Chemistry 9 (1975), S. 379-381 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 14
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    International Journal of Quantum Chemistry 9 (1975), S. 385-392 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this communication we discuss a method of incorporating corrections to the coupled Hartree-Fock (CHF) formalism by introducing the so-called “rearrangement effect.” In this we take account of the relaxation of the core orbitals when excitations from a starting Hartree-Fock wave function occur. The magnitude of this correction numerically is found to be quite significant for the polarizabilities of two-electron atomic systems, results for which are reported.
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  • 15
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    International Journal of Quantum Chemistry 9 (1975), S. 431-443 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A perturbation approach based on resolvent technique and Padé approximants is proposed. The eigenvalue of interest is part of a solution of two nonlinear algebraic equations. The nonlinear equations are arrived at by considering two different expression of the expectation value of the resolvent of an outer projection of the Hamiltonian. The first expression is based on the spectral resolution of the resolvent, and the second one is obtained by a power series expansion analogous to that applied in the derivation of the energy expression in the Brillouin-Wigner perturbation theory. The truncated power series is extrapolated by Padé approximants of type II. The method is tested on a CI calculation of the energy of the lowest 1Σ state of the B2 molecule.
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  • 16
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    International Journal of Quantum Chemistry 9 (1975), S. 479-487 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Complementary variational functionals are derived which impose upper and lower bounds on transition probabilities. These functionals are used to yield bounds in terms of sets of sum rules, and illustrative calculations are presented for hydrogen, helium and krypton atoms.
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  • 17
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    International Journal of Quantum Chemistry 9 (1975), S. 505-516 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Dynamical screening in π-electron systems is studied by the equations of motion method. By using a partitioning technique on the equations of motion we can obtain simple expressions for the effect of dynamical screening directly on the transition energies and transition moments in π-electron systems. These results are used to study the effect of such screening in the N → V transition in ethylene. This procedure can be used to extend the equations-of-motion method to larger π-electron systems.
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  • 18
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    International Journal of Quantum Chemistry 9 (1975), S. 557-557 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 19
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We report an attempt of ab initio computation for the ground-state wave-function of a few organic semiconductors (namely TCNQ salts and the PDC charge transfer complex) for which we show that electrical conduction appears to look strongly like that of a band-gap semiconductor.
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  • 20
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Some applications of an optimization technique due to Levenberg in theoretical submolecular biology are described. This technique has proved a very useful tool for the generation of three-dimensional structures of molecules having cyclic components or other constrained regions. The generated molecular structures provide the starting point for quantum chemical calculations of great value in solving problems of biological interest. The mechanism of transport of alkali metal cations by valinomycin is one such example and this paper describes briefly how various conformations of valinomycin were obtained using the optimization technique. A variant of the same method has been suggested as a new technique for the detection of topographical similarities between apparently dissimilar molecules which are substrates for the same enzyme or receptor site. The technique is illustrated with a comparison of a tricyclic antidepressant with norepinephrine both of which have been postulated to compete for a common receptor site in the “amine pump” of peripheral adrenergic nerve cell membranes. Another area in which the optimization technique has proved useful is in developing an optimum separable localized bond function method designed for rigorous calculations on large saturated molecules. This method is briefly described.
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  • 21
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    International Journal of Quantum Chemistry 9 (1975), S. 459-471 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ab initio SCF-LCAO-MO calculations have been performed for TCNQ and its positive and negative ions in various electronic states. A basis set consisting of 412 primitive Gaussian type orbitals contracted to 180 was used in the investigation. The electron density distribution in TCNQ and the negative ions, and the redistribution upon ionization has been illustrated by plotting difference density contour maps. The quinone structure of the neutral TCNQ system undergoes a transformation to a benzenoid structure when electrons are added. Electronic transitions, ionization potentials and electron affinities have also been calculated.
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  • 22
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    International Journal of Quantum Chemistry 9 (1975), S. 517-526 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The extended Hartree-Fock equations of the spin-projected scheme are derived in a form suitable for the construction of a surely convergent method of solution using successive optimization of the individual orbitals. The derivation is based on a specific form of the generalized Brillouin theorem.
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  • 23
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    International Journal of Quantum Chemistry 9 (1975), S. 1113-1129 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Valence-bond type wavefunctions based on contracted Gaussian atomic orbitals afford an adequate description of the potential of the ground 1Σg+ state of H2 for a wide range of internuclear separations. Semiempirical techniques for scaling the potential curve are evaluated. An efficient method for optimizing non-linear variables in the wavefunctions is explored.
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  • 24
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    International Journal of Quantum Chemistry 13 (1978), S. 391-410 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A model consisting of a harmonic oscillator well and a repulsive inverse square potential, coupled by a delta function, is solved. We find the S-function for this case and study its poles as a function of the coupling strength. These poles show how the harmonic levels shift and broaden as the two potential curves couple and predissociation occurs. A “new state” is found when the energy threshold is just below the first excited state of the harmonic oscillator.
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  • 25
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    International Journal of Quantum Chemistry 13 (1978), S. 455-456 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 26
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    International Journal of Quantum Chemistry 13 (1978), S. 499-507 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The thermodynamics of the DNA helix-coil transition is studied, starting from the thermodynamical potential difference between the states helix and coil; this potential difference is understood as the difference in free energies. With only three parameters obtained from experimental data different quantities of the T2 phage DNA molecule are calculated. It is observed that the phase transition is of second order.
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  • 27
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 28
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    International Journal of Quantum Chemistry 13 (1978) 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 29
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    International Journal of Quantum Chemistry 13 (1978), S. 605-617 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A very efficient and exact method for calculating the long-range effects in polymers is reported. The method is based on the multipole expansion within the Fock operator, and exact summation up to infinity is carried out. Only a small number of one-electron integrals have to be considered, while in the traditional approach one has to compute a large number of two-electron integrals. Results on LiH model polymer have been obtained with a remarkable accuracy within a negligible computing time.
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  • 30
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    International Journal of Quantum Chemistry 13 (1978), S. 641-677 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Let E(R) be a potential-energy function for a neutral or ionic diatom in the Born-Oppenheimer approximation. Then the approximation of E(R) for 0 〈 R 〈 ∞ starting from finite and typically small sets of given information is considered. The approach is based on the fact that the scaled potential curves F(R) = R2E(R) derive from an eigenvalue problem which depends linearly on R. The nature of the curves F(R) is examined in detail. The results include the discovery of various approximants, some of which display rigorous bounding properties and others, closely related, whose behavior with respect to the approximated function appears to be predictable.
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  • 31
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    International Journal of Quantum Chemistry 13 (1978), S. 679-692 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In an attempt to rationalize and improve an approximate exchange perturbation scheme related to the model of Murrell et al., more accurate approximations are introduced eliminating the use of empirical parameters. The total interaction energy has been evaluated as the sum of additive electrostatic, exchange, charge transfer, and dispersion contributions. It is proven that the assumption of intramolecular ZDO approximation is equivalent to the use of the Mulliken formula for intermolecular intergrals in the region of small overlap. It is also shown that the use of exact two-center resonance integrals and atomic multipole expansion leads to a substantial improvement of results. The method has been applied to calculation of interaction energies of some model hydrogen-bonded complexes of water, hydrogen fluoride, adenine, thymine, guanine, and cytosine using approximate all-valence wave functions.
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  • 32
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    International Journal of Quantum Chemistry 13 (1978), S. 769-775 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The problem considered is that of selecting the finite orbital basis which will minimize the energy in a given size CI calculation. (1) A one-body operator is defined which has as eigenfunctions the desired optimal basis. The operator is defined in terms of the basis which leads to a self-consistency problem of Hartree-Fock type. (2) A method of successive orbital rotations is defined which is shown to have desirable convergence properties.
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  • 33
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    International Journal of Quantum Chemistry 13 (1978), S. 160-160 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 34
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    International Journal of Quantum Chemistry 13 (1978), S. 199-206 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: It is shown that application of the orthonormality-constrained variation method to the absolute squares of three kinds of overlap integrals leads to eigenvalue equations and of which the eigenvectors belonging to maximum (minimum) eigenvalues are the maximum (minimum) overlap, localized, and hybrid orbitals. In the eigenvalue equations, coupling operators similar to those used in SCF theory are found to occur. Connection of the maximum orbitals to a many-shell model, a simple MO theory, and Löwdin's orthonormalization is also discussed.
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  • 35
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    International Journal of Quantum Chemistry 13 (1978), S. 235-238 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Electric polarizabilities are calculated by solving the first- and second-order perturbation equations through a variational procedure. Satisfactory numerical results are obtained for a number of molecules using the CNDO approximation with an extended basis set.
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  • 36
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    International Journal of Quantum Chemistry 14 (1978), S. 209-212 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The mathematical basis for the Ruedenberg's and Mulliken's approximations is given in a general framework.
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    International Journal of Quantum Chemistry 14 (1978), S. 239-243 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The ab initio Hartree-Fock crystal orbital method is used for the calculation of the energy band structure of a one-dimensional model of (SN)x. Two energy band structures are described corresponding to the self-consistent spin density wave (SDW) and the self-consistent charge density wave (CDW) solution, respectively.
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  • 38
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    International Journal of Quantum Chemistry 13 (1978), S. 367-374 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The multiple scattering molecular orbital method, with different choices of sphere radii and local exchange, is applied to the cluster CrF63-. The orbital energies are almost always in the same order but uniformly moved up or down the energy scale depending on which parameters are used. Charge densities are only slightly dependent on the parameters. A method to avoid interaction with Rydberg-like states is suggested.
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  • 39
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    International Journal of Quantum Chemistry 13 (1978), S. 411-428 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A general quantum-mechanical description of molecular transport across biological membranes has been developed. The one-dimensional Schrödinger equation for the motion of ions and molecules across the biological membrane has been solved using reasonable potential barriers. Two types of potential profiles for such transports have been considered: a flat barrier proposed by Hall et al. for lipids and an oscillatory potential proposed by Lauger for lipids and by us in this paper for intrinsic proteins. The general behavior of the transmission coefficient as a function of energy and the variation of the permeability as a function of structural changes in the membrane have been discussed. Finally, the importance and areas of applicability of such a theory have been pointed out.
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  • 40
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    International Journal of Quantum Chemistry 14 (1978), S. III 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 41
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    International Journal of Quantum Chemistry 13 (1978), S. 483-497 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Le découpage de la densité électronique totale dans une molécule, en contributions provenant des diverses orbitales, permet de définir des régions orbitalaires de caractère conventionnel dont la charge totale est égale à la somme des populations de Mulliken des orbitales constituant les diverses régions. La fluctuation relative de la charge de ces régions s'exprime simplement en fonction des populations de Mulliken et des indices de liaisons. Cette analyse de la densité dans des molécules variées (saturées ou conjuguées) permet de retrouver les liaisons chimiques de la graphie classique comme correspondant à des régions orbitalaires de charge voisine de 2 et présentant une fluctuation relative fiable (≤0, 10). Compte tenu du caractère dynamique que contient la notion de liaison, les résultats obtenus trouveraient une interprétation simple dans l'espace des phases. L'impuissance de la Mécanique quantique de donner une description dans cet espace expliquerait l'impossibilité de déduire de calculs quantiques la notion měme de liaison chimique.
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  • 42
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
    Notes: The dependence of the molecular electrostatic potential V on the method of calculating the wave function and on the basis set has been examined for three electronic states of H2CO. The calculations analyzed here refer to two different basis sets: a minimal set and a split-valence shell set, both supplemented with diffuse p orbitals. The methods of calculation include the SCF procedure (for the ground state), CI procedures of increasing complexity, which practically reach their asymptotic limits, and, for the excited states, simpler methods (rigid orbital excitation, complete CI of single excitations, electron-hole potential methods). It appears that in the ground state the two bases give equivalent descriptions of V when the CI process reaches the asymptotic limit and that the SCF descriptions approximate fairly well the more accurate ones. For the 3A1(π → π*) state the conclusions on the two basis sets are similar and, in addition, it is shown that a simple method (EHP) gives an approximation of V that reproduces the essential features of the complete CI calculations. The inadequacy of both basis sets for the representation of the 1A1(π → π*) state turns out to be evident. A discussion is presented concerning the possibility of adopting the calculation of V as an auxiliary tool to compare the accuracy of different descriptions of the same electronic state.
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  • 43
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    International Journal of Quantum Chemistry 13 (1978), S. 597-603 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A multiple scattering method is used for determining the total cross section of elastic electron scattering for the SF6 molecule in the energy range 10-60 eV.
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  • 44
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    International Journal of Quantum Chemistry 13 (1978), S. 627-634 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The approximate way of calculating the supermolecular density applied in the Gordon and Kim method is examined. If the supermolecular density is approximated by a sum of the subsystem densities, the results for the individual contributions to the interaction energy (kinetic, potential) appear to be incorrect as compared with those obtained in the SCF approach and in first-order perturbation theory. However, a considerable improvement of the statistical results is obtained if a more suitably calculated supermolecular density is used. All calculations have been carried out for the He2 system.
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  • 45
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    International Journal of Quantum Chemistry 13 (1978), S. 693-695 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
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  • 46
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    International Journal of Quantum Chemistry 13 (1978), S. 719-730 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A survey of our recent work on algebraic structures and reduced-density-matrix theory is presented. Our approach leads to a method of classifying reduced density matrices and generalizes the notion of open and closed shells in many-body theory.
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  • 47
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    International Journal of Quantum Chemistry 13 (1978), S. 777-790 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Optimal orbital exponents are approximated by minimization of the reduced Hamiltonian orbital ground state energy. They appear to be as good as and are obtained at much less expense than the values derived by the usual SCF exponent optimization scheme. Partitioning of energy into 0-energy, 1-energy, and 2-energy (Absar and Coleman, Int. J. Quant. Chem. 10, 319 (1976); Chem. Phys. Lett. 39, 60 (1976)) is used to study the variation in the electronic energy surface upon variation of orbital exponents. The 1-energy operator, the natural orbitals of which are the reduced Hamiltonian orbitals, is compared with the SCF operator.
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  • 48
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    International Journal of Quantum Chemistry 13 (1978), S. 791-799 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Representable reference density matrices are applied to the graphical description of the Coulomb hole in a CI wave function for the first excited 1S state of the four-electron boron ion B+. It is found that a satisfactory picture of the Coulomb hole emerges only when the symmetry of the correlated wave function is recognized in the construction of the reference full-density matrix.
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  • 49
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    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ab initio LCAO SCF MO calculations are carried out on planar Co-porphine with a basis set of roughly double zeta quality for Co and N and of single zeta quality for C and H. The net charge on Co and N and the overlap population between them are 1.78, -0.57, and 0.06, respectively, in the 2A1g, state, which is known to be the ground state by experiment. The bonding in this complex is thus largely ionic. The first and second calculated ionization potentials are 6.51 and 6.77 eV, respectively, and are in reasonable agreement with the observed ionization potentials of 6.44 and 6.62 eV for Ni-tetraphenylporphine. CI calculations within the framework of the ligand field theory are also performed. The calculated order of the five lowest states is 4B2g ≈ 4Eg, 4A2g, 2A1g, 4Eg from below and is not in agreement with the semiempirical order of 2A1g ≈ 4B2G, 4A2g, 2Eg, 4Eg determined by Lin.
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  • 50
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    International Journal of Quantum Chemistry 14 (1978), S. 191-207 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The properties of biorthonormal sets and their use in quantum chemistry are discussed. A theoretical description of the interaction between one-electron atoms is presented. The description is based on a single orbital per electron but is otherwise complete. Structurally simple relations are derived for the energy of interaction, and theoretical justifications for the London equation and the diatomics-in-molecules method are presented. Some comments on the stability of spin-coupling-optimized methods are made.
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    International Journal of Quantum Chemistry 14 (1978), S. 181-190 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A SCF method using localized molecular orbitals which are built up on hybrid atomic orbitals is proposed to obtain the charges in infinite crystals. Hybrid orbitals are built up on a minimal STO basis set. The formalism has been adapted in order to take into account the periodicity of the system and its infinite size by introducing the Madelung constant. The total energy is given by an infinite sum of terms each corresponding to the energy of a bond in the crystal field. Minimizing this bond energy with respect to eigenvectors it is straightforward to obtain the electronic charges, whence the polarity, i.e., the ionicity, of bonds. In this first paper, we study and discuss the polarity of bonds in zincblende and wurtzite-type compounds built up on first and second row elements. Our values are coherent between themselves and in agreement with other authors' results. The connection with electronegativity and polarizability is discussed.
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    International Journal of Quantum Chemistry 14 (1978), S. 231-237 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A procedure to improve trial wave functions is given in terms of the off-diagonal hypervirial theorem. This procedure is closely related to the optimum scaling method which is valid for the diagonal hypervirial theorem. The second excited state of the one-dimensional oscillator model is employed as an example, and improved wave functions and expectation values are calculated. The results are compared with previous values based on the diagonal hypervirial theorem.
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    International Journal of Quantum Chemistry 14 (1978), S. 289-297 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper, MC-SCF and CI methods have been explored for the calculation of ground- and excited-state energies of some aromatic heterocycles in the PPP framework. A new algorithm for solving the orbital equations in MC-SCF theory has been suggested and its performance has been compared with the conventional gradient optimization technique. Energies of first few transitions have been calculated and compared with rather extensive CI results.
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    International Journal of Quantum Chemistry 14 (1978), S. 319-327 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An analytical potential function for the pairwise interaction of methane and water is reported. The function is representative of 225 ab initio quantum-mechanical calculations of the intermolecular interaction using 6-31G self-consistent-field molecular-orbital theory. The statistical parameters of the curve fitting are given and isoenergy contour maps of the interaction energy are presented and discussed.
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    International Journal of Quantum Chemistry 14 (1978), S. 341-341 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
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  • 56
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    International Journal of Quantum Chemistry 14 (1978), S. 353-359 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We review the methods and some applications of complex scaling transformation as well as some goals that now seem accessible using this technique in atomic and molecular physics.
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  • 57
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    International Journal of Quantum Chemistry 14 (1978), S. 393-418 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The theories of the dilatation, r → r eiθ, and translation, x → x + iq, transformations as related to the Stark problem are reviewed, and new results obtained. Results for the hydrogen atom n = 1 and n = 2 levels and the 1P0, 2s2p H- shape resonance in dc fields are presented, and the extension to the ac Stark effect made. Spectral estimates are made using the technique of the numerical range and via discussion of several model problems, using both coordinate rotation and coordinate translation.
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    International Journal of Quantum Chemistry 14 (1978), S. 457-513 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The theory of this paper deals with certain aspects of the formal properties of atomic and molecular highly excited nonstationary states and the problem of calculating their wave functions, energies, and widths. The conceptual framework is a decay theory based on the consistent definition and calculation of the t = 0 localized state, |Ψ. Given this framework, the following topics are treated: (a) The variational calculation of Ψ0 and E0 using a previously published theory that generalized the projection operator approach to many-electron systems. (b) The exact definition of the resonance energy. (c) The possibility of bound states in the continuum. (d) The relation of Ψ0 to the resonance (Gamow) function Ψ and of the Hamiltonian to the rotated Hamiltonian H(θ) based on the notion of perturbation of boundary conditions in the asymptotic region. (e) The variational calculation of real and complex energies employing matrix elements of H and H2 with square-integrable and resonance functions. (f) The mathematical structure of the time evolution of |Ψ0〉 and the possibility of observing nonexponential decays in certain autoionizing states that are very close to the ionization threshold. (g) A many-body theory of atomic and molecular resonances that employs the coordinate rotation method.
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    International Journal of Quantum Chemistry 14 (1978), S. 623-634 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The theoretical justification of the model potential method is studied in some detail. The correct equations within the framework of Roothaan's open-shell scheme are derived and the approximations necessary to get a workable method are discussed. Analysis of the local part of the model potential suggests a new analytical form for it. The new expression is theoretically more consistent than the original one, and it can be determined in a more straightforward way. A basis set approximation, which is particularly suitable for approximate evaluation of two-electron integrals when only valence orbitals are involved, is discussed and tested with encouraging results. The ideas are tested on the Fe and I atoms.
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    International Journal of Quantum Chemistry 14 (1978), S. 649-657 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The polarization model, originally developed to describe deformable and ionizable water molecules, has been extended to hydrogen fluoride. Since electronic polarization is explicitly included, the interaction energy in aggregates of molecules (with or without ions) is nonadditive. The model properly describes the structure of (HF)2, including off-axis bending of the proton acceptor molecule. Calculations are presented to illustrate elementary gas-phase reactions involving proton transfer between HF and F-, and H2F+ and F-.
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    International Journal of Quantum Chemistry 14 (1978), S. 635-639 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The concept of a universal basis set for electronic structure calculation is illustrated by presenting results obtained when basis sets are transferred from one atom to another. A single Slater-orbital basis set, consisting of nine 1s and six 2p functions, produces Hartree-Fock total energies and orbital energies in good agreement with the most accurate calculations of these energies obtained using different basis sets individually optimized for each atom. Transferability of integrals is a natural consequence of the use of the same basis set for each atom in a molecule.
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    International Journal of Quantum Chemistry 14 (1978), S. 641-648 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The possible uses of the half-projected Hartree-Fock (HPHF) scheme for computing potential-energy surfaces for both singlet and triplet states are investigated. For that purpose, a new procedure based on the simultaneous solution of two eigenvalue equations is presented for calculating the HPHF function. Applications are given in the cases of the singlet ground state and lowest triplet state of the lithium molecule. In both cases, the HPHF scheme is found to yield the correct general shape of the curves. The features of these curves are discussed. Finally, it is concluded that the HPHF model seems to be useful as a tool for determining potential-energy surfaces, especially in the cases of large molecules where more sophisticated methods are unmanageable.
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    International Journal of Quantum Chemistry 14 (1978), S. 737-740 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The molecular spectra of formamide (HCONH2) are interpreted by the use of the new semiempirical method HAM/3. Very good agreement with experiments can be obtained for the calculation of all valence ionization energies as well as for the (negative) electron affinity. In addition, the calculated excitation energies allow an unambiguous interpretation of the UV spectrum, for which previously different ordering of the triplet 3ππ* and 3nπ* transitions have been suggested.
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    International Journal of Quantum Chemistry 31 (1987), S. 1-1 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
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    International Journal of Quantum Chemistry 31 (1987), S. 33-44 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The theory of MCSCF and CI energy derivatives with respect to geometrical variations is briefly reviewed with special attention given to the MCSCF and MRCI energy gradients. A computational procedure is proposed for MRCI energy gradients that does not require the solution to any “coupled-perturbed MCSCF” equations, it does not require any expensive direct-CI matrix-vector products involving derivative integrals, and it does not require any derivative integrals to be transformed from the AO basis to the MO basis. An additional feature is that it does not require any changes to existing MCSCF gradient evaluation programs in order to compute MRCI gradients. The only difference in the two cases is the exact nature of the data passed to the gradient evaluation program from the previous steps in the computational procedure. The additional effort required to compute the entire MRCI energy gradient vector is approximately that required for one additional iteration of the MRCI diagonalization procedure and for one additional MCSCF iteration. For large scale MRCI wave functions, the MRCI energy gradient evaluation should only require about 10% of the effort of computing the wave function itself. This computational procedure removes a major computational botleneck of potential energy surface evaluation.
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    International Journal of Quantum Chemistry 31 (1987), S. 65-71 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Preliminary results are presented for transition probabilities in the H + H2 system derived from an adiabatic representation in terms of surface functions on hyperspheres. Special attention is given to the resonance structure for transition probabilities in the first vibrational level.
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    International Journal of Quantum Chemistry 31 (1987), S. 99-112 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Low-lying excitation energies from the ground state of Be were calculated using a basis set of 61 Cartesian Gaussian functions. Three approximations were employed: the time-dependent Hartree-Fock (TDHF), second-order equations-of-motion (EOM), and multiconfigurational time-dependent Hartree-Fock (MCTDHF). The TDHF excitation energies are 0.5-1.1 eV lower than experiment, and the EOM values are 0.3-1.2 eV lower than experiment, whereas the MCTDHF excitation energies deviate on the absolute average from experiment by only 0.03 eV. We found that in an MCTDHF calculation, any proper MCSCF stationary point is a good reference (i.e., initial) state, not just the ground state. Experimental values for oscillator strength are accurately known only for the 2s2X1S → 2s2p1P0 transition. The TDHF value and the MCTDHF value agree with experiment, but the EOM value does not. The agreement of the TDHF value with experiment seems to be coincidental, because for higher lying transitions the TDHF values differ by approximately a factor of two or more from the more accurate MCTDHF. Frequency independent polarizabilities, α(0), were also calculated with the TDHF, HRPA, and MCTDHF and frequency dependent polarizabilities, β(ω), were calculated with the MCTDHF. No experimental data for Be polarizabilities exist, but we expect the MCTDHF values to be among the most accurate calculations available.
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    International Journal of Quantum Chemistry 31 (1987), S. 941-950 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A version of the CNDO/1 method has been outlined that includes dominant relativistic effects. The method utilizes a nonempirical parametrization based on atomic Dirac-Fock calculations. The goal of this QR-CNDO/1 method lies in its applicability to molecules consisting of arbitrary atoms (z = 1-118). Applications to molecular geometries and ionization potentials for 50 molecules are presented.
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    International Journal of Quantum Chemistry 32 (1987) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 32 (1987), S. 13-18 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: According to the formulas obtained in the preceding paper, it may be used for all types of the hybridization with any set of azimuthal quantum numbers l, l = 0 through l = 5, and a complete theoretical data of bond angles and bond strengths are shown in this paper.
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    International Journal of Quantum Chemistry 32 (1987), S. 71-86 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the unitary-group formulation of quantum chemistry, the spin-projected, configuration-state spaces of quantum chemistry are realized by the irreducible representation spaces (IRS) of the freeon unitary group U(n), where n is the number of freeon orbitals. The Pauli-allowed IRS are labeled by the partitions [λ] = [2(N/2)-s, 12S], where N and S are the particle number and the spin, respectively. The generator-state approach (GSA) to the unitary-group formulation consists of (1) the construction of the overcomplete, nonorthonormal generator basis for each IRS; (2) the Lie-algebraic computation of matrix elements over generator states; (3) the Moshinsky-Nagel construction of the complete, orthonormal Gel'fand basis in terms of the generator basis; and (4) the computation of matrix elements over Gel'fand states in terms of matrix elements over generator states.
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    International Journal of Quantum Chemistry 32 (1987) 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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  • 73
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    International Journal of Quantum Chemistry 32 (1987), S. 181-191 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: It has been shown that an easier procedure to the study of molecular electrostatic potentials than the prevalent monopole isopotential approach is to use a dipole as the mapping device: allow the dipole to move on a geometrical surface enclosing the molecule such that the distance between the surface and the nearest atoms of the molecule (closest distance of approach) is fixed, say at 2 Å, calculate the electrostatic interaction energy between the molecule and the dipole at different points of the surface, and let the dipole orient itself along the minimum energy direction and treat these minimum energies as the desired electrostatic potentials. Thus the favorable binding sites of a given molecule for other species along with their relative orientations can be obtained. This procedure has been applied to the nucleic acid bases using the necessary input data from two independent sources. Thus success of the procedure in predicting important features of molecular electrostatic potentials has been demonstrated.
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  • 74
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
    Notes: A systematic examination of the components of the interaction energy, obtained with the Kitaura and Morokuma method, for nine H-bonded dimers without and with counterpoise corrections (CP) is presented. The nine dimers Hn A … HBHm correspond to all the possible combinations of HF, H2O, and NH3 as electron donors and electron acceptors. The interaction energy and the corresponding components have been computed over a sizable interval of intermolecular distances with five basis sets (STO-3G, MINI-1, 3-21G, 4-31G, 6-31G**) selected among those most extensively used to study interactions in larger systems. The CP corrections to the ΔE components have been obtained with a method, implemented in our group, which permits assignment to the pertinent components of ΔE of a physically reasonable portion of the CP correction even though different CP corrections are adopted. We examine here three versions of the CP correction, namely, the full CP correction (i.e., the original version of Boys and Bernardi) and CP corrections limited to the virtual space of the partner or to the electron donor only. The resulting data are employed to assess the basis set dependence of several models of hydrogen bonding (the electrostatic model, the semiclassical model, etc.) both with and without CP corrections.
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  • 75
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    Topics: Chemistry and Pharmacology
    Notes: A detailed analysis of the ΔE(R) curves for nine hydrogen bonded dimers involving HF, H2O, and NH3 as partners, computed with five basis sets (STO-3G, MINI-1, 3-21G, 4-31G, and 6-31G**) and subjected to counterpoise (CP) corrections with three different methods is reported. Using several criteria and tests, the positive effect of full CP corrections for the description obtained with all the basis sets (with the exception of the STO-3G one) is pointed out. The CP correction at the 6-31G** levels is still sizable and improves the results with respect to the estimated Hartree-Fock limits of ΔE(Req) and Req. The results obtained with the application of the full CP correction to the MINI-I energies are of relatively good quality. The STO-3G energies at the SCF level are, on the contrary, overcorrected by the full CP correction and slightly improved by “limited” CP corrections: this basis set, however, is not recommended for calculations of geometries and stabilization energies of H-bonded dimers of this size.
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    International Journal of Quantum Chemistry 32 (1987), S. 295-312 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: An accurate analytical electron density for the beryllium atom is obtained by using a fast and systematic method recently developed and tested for the neon atom. Asymptotic conditions both at the nucleus and at large distances are obeyed. A point-by-point comparison between our density and the one obtained from an almost “exact” configuration interaction wave function shows that differences are less than 0.5% for r between 0 and 5 bohrs and less than 1 % up to 9 bohrs. The accuracy of the density is also assessed by comparing results of density moments and x-ray scattering factors.
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    International Journal of Quantum Chemistry 32 (1987), S. 361-375 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We discuss a procedure for calculating numerical Hartree-Fock orbitals that can be applied to polyatomic systems. This approach is formulated in momentum space to avoid Coulomb singularities and uses fast Fourier transforms to solve integral convolutions. Results for a number of simple systems are presented.
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    International Journal of Quantum Chemistry 31 (1987), S. 405-415 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Binding of Zn2+ to imidazole (Im) and methyl imidazole (MeIm) is studied by ab initio methods as a model for the effect of cation binding on tautomeric energies. Gradient energy optimized conformations were obtained for all neutral and ionic structures, including the deprotonated molecules and the ylides. The N3—H tautomer of MeIm is calculated to be more stable than N1—H by about 1 kcal/mole. However, binding of a Zn2+ cation to the available nitrogen site is found to reverse the order of binding, leaving N1—H more stable by 1 kcal/mole. Binding of Zn2+ produces a significant perturbation in the electronic structure, a smaller shift in the equilibrium conformation of the imidazole ring, and only a small absolute shift in the relative tautomer energies. Methyl substitution at C5 has a small effect on both conformation and energetics.A high-energy ylide tautomer is produced by moving the proton bound to C2 to the N1 atom. The binding of Zn2+ to the C2 site is substantially stronger than to the N1 site, yielding nearly isoenergetic ZnIm2+ conformations for binding to either N or C atoms. For the deprotonated salts the lowest energy conformation has the C2—N3 bond bridged by Zn2+.
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    International Journal of Quantum Chemistry 31 (1987), S. 425-427 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: It is made clear that two different statements in the literature concerning energy derivatives are completely compatible by deriving them as two different interpretations of the same equation. Some other aspects of these results are also discussed.
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    International Journal of Quantum Chemistry 31 (1987), S. 435-443 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Accurate methods for computing energies and electronic properties of atoms and molecules have been derived from direct treatment of localized pairs of electrons. The conceptual development and implementation of such methods is reviewed.
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    International Journal of Quantum Chemistry 32 (1987), S. 473-489 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The rigorous derivation of the energy density functional is proposed within the framework of the spinfree, or spin-restricted formulation of the energy density functional theory. It is shown particularly that the kinetic energy density functional is given by a sum of the Weizsacker term and the so-called “modified” Thomas-Fermi one. The variational principle is formulated for the energy density functional theory in terms of the Euler-Lagrange equation, and the virial theorem is proposed.
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    International Journal of Quantum Chemistry 32 (1987), S. 591-594 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The time-dependent Schrouml;dinger equation for the oscillator H = α(t)p2 + β(t)x2 + γ(t)x is exactly solved. The time evolution operator is easily obtained by means of an operator algebra and the quantum-mechanical equations of motion. The problem is reduced to solving the classical equations of motion. The method is shown to apply to multidimensional oscillators.
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    International Journal of Quantum Chemistry 31 (1987), S. 445-453 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A modified Bohr orbit procedure is used to calculate the energies for the 1S ground state and the 2P, 3D, and 4F excited states of the helium atom. The energies are calculated from \documentclass{article}\pagestyle{empty}\begin{document}$ {{\int\limits_0^\pi {E\left(\Phi \right)P\left(\Phi \right)d\Phi } } \mathord{\left/ {\vphantom {{\int\limits_0^\pi {E\left(\Phi \right)P\left(\Phi \right)d\Phi }} {\int\limits_0^\pi {P\left(\Phi \right)d\Phi } }}} \right. \kern-\nulldelimiterspace} {\int\limits_0^\pi {P\left(\Phi \right)d\Phi } }} $\end{document}, in which E(φ) is the Bohr orbit energy for angle φ between the position vectors \documentclass{article}\pagestyle{empty}\begin{document}$ \vec r_1 $\end{document} r1 and \documentclass{article}\pagestyle{empty}\begin{document}$ \vec r_2 $\end{document} r2, and P(φ) is a probability function for this angle. Numerical procedures are used to evaluate the integrals. Energies that range between -2.9082 and -2.9054 au are calculated for the 1S state (cf. -2.9037 au, exact). The Bohr energies for the excited states are -2.1318, -2.1240, -2.0562, -2.0555, -2.0314, and -2.0312 au, which are generally close to the exact energies of -2.1332, -2.1239, -2.0557, -2.0557, -2.0313, and -2.0313 au for the 23P, 21P, 33D, 31D, 43F and 41F states. Some relationships that exist between the Bohr theory and the Schrödinger local energies are discussed. Approximate Bohr orbit estimates for the energies of the 2P states of He, Li+,…,Ne8+ are reported.The invariance of the two-electron Bohr hamiltonian with respect to the interchange of the electron coordinates leads to two classical probability functions when the orbit quantum numbers for the two electrons differ.
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    International Journal of Quantum Chemistry 31 (1987), S. 463-470 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Valence-bond calculations are reported for the isoelectronic series of molecules and ions: N2, CO, BF, NO+ and CN-. The most important structures are N≡N, C=O, Bπ—F, N+=O and C=N. Hybridization of the 2s and 2p orbitals is important. Only two or three structures are required to obtain an energy lower than that obtained with the molecular orbital approximation. Structures in which the electronegative element loses a σ-orbital or gains a π-orbital are favored. π-bonds tend to be favored over σ-bonds. The bond in NO+ resembles that in CO, whereas that in CN- resembles the bonding in N2.
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    International Journal of Quantum Chemistry 31 (1987), S. 471-487 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ab initio SCF, CI, CEPA, and MCSCF techniques are compared and contrasted in a theoretical study of the 1s core ionized Li2 molecule from the point of view of core hole localization. In agreement with earlier studies of symmetric core ionized molecules, SCF theory is found to give a physically reasonable description of core ionization only when symmetry breaking is allowed. This results in a dramatic lowering of the energy of the core ionized state and hence of the ionization potential. By extension, CI wave functions that are developed in terms of a broken symmetry SCF reference plus its single and double excitations are found to perform significantly better than those constructed from symmetry adapted SCF orbitals. Alternatively, if the full point group symmetry is to be retained, a multiconfigurational treatment is called for and, in agreement with the conclusions of an analogous study on O2 [H. Ågren, P.S. Bagus, and B.O. Roos, Chem. Phys. Letters 82, 505(1981)], it is found that a modestly sized MCSCF wave function is capable of accounting for the energetic effects of symmetry breaking. Potential energy curves for Li2 and several states of core ionized Li2 have been calculated, allowing predictions of the adiabatic ionization potential and vibrational, satellite, and Auger structures in the photoelectron spectrum of Li2 to be made.
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    International Journal of Quantum Chemistry 31 (1987), S. 489-505 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A practical algorithm is described for generating a set of symmetry- and spin-adapted antisymmetrized products of molecular orbitals (SAAPs) which form an orthogonal basis for a full active configuration space. The spin-adaptation is completely general. The space-symmetry adaptation is accomplished for the groups C∞v and D∞v.
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    International Journal of Quantum Chemistry 32 (1987), S. 685-697 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A complete description of the rotational isomerism of monothioformic acid is presented. Ab initio results concerning the barrier heights and the energy difference between the stable isomers are in good agreement with the experimental data. A reduced potential function deduced from our calculations has been used to characterize the kinetics and thermodynamics of the rotational isomerization. The reported ab initio values of equilibrium constants are in good agreement with the experimental ones. From the analysis of the available experimental data, we have found that the free energy and enthalpy behavior are quite similar and that no noticeable entropy contributions are involved in the internal rotation, in agreement with previous studies on unimolecular isomerization processes.
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    International Journal of Quantum Chemistry 32 (1987), S. 723-723 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 32 (1987), S. 1-1 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 32 (1987), S. 85-103 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The equilibrium geometry, stabilization energy, and electric polarizability of formic acid, formamide, and the three possible cyclic hydrogen-bonded pairs are obtained by ab initio calculations using the STO-3G, 4-31G, and 6-31G** bases. These three properties are found to be very much dependent on the basis set extension. The polarizability of the dimers is found to be basically additive in contribution from the monomeric moieties.
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    International Journal of Quantum Chemistry 32 (1987), S. 133-147 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the course of conformational motions of molecules the changes in shapes of electronic charge distributions follow that of the nuclear framework. However, this coupling between the changes in the nuclear geometry and electron density may depend on the actual nuclear displacement; the coupling may be weak or strong for a given conformational motion. It is of some interest to analyze how faithfully the charge density variations follow the nuclear displacements in a family of conformational rearrangements. In certain cases small conformational changes may induce large changes in the shape of charge density distributions, while in other cases large and qualitatively important conformational changes may involve qualitatively inessential distortions in the shape of electron distributions. In this article we describe a new classification of conformations based on those domains of nuclear configuration space within which the „shape groups“ (symmetry independent homology groups) of the electric charge density remain invariant. Such an analysis might be valuable when seeking correlations between molecular structure and certain biological or biochemical activities.
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    International Journal of Quantum Chemistry 32 (1987), S. 211-219 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Practical aspects of the calculation of the proton transfer process in a model of the active site of the thiol protease papain are explored with basis sets of different sizes. Results from ab initio calculations with the STO-3G, 4-31G, 6-31G, 6-31G* basis set, and a 6-31G basis set augmented with polarization functions on the sulfur atom are compared for their performance in describing the proton transfer energy. The nature of the convergence of the calculated properties of the potential curve for proton transfer with the increase in basis set indicates the need for a split-valence basis set and for polarization functions on the sulfur in order to achieve an appropriate description of this system. Correlation corrections to the calculated energies are shown to contribute significantly to the characteristics of the proton transfer energy curve.
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    International Journal of Quantum Chemistry 32 (1987), S. 281-288 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The scope of multistep modeling (MSM) is expanded by adding a least-squares minimization step in the procedure to fit backbone reconstruction consistent with a set of C-alpha coordinates. The analytical solution of Phi and Psi angles, that fits a C-alpha x-ray coordinate [1] is used for tyr-tRNA synthetase. Phi and Psi angles for the region where the above mentioned method fails, are obtained by minimizing the difference in C-alpha distances between the computed model and the crystal structure in a least-squares sense. We present a stepwise application of this part of MSM to the determination of the complete backbone geometry of the 321 N terminal residues of tyrosine tRNA synthetase to a root mean square deviation of 0.47 Å from the crystallographic C-alpha coordinates.
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    International Journal of Quantum Chemistry 32 (1987), S. 325-330 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: We have examined an application of the weighted identification number in the QSAR study of the toxicity of aliphatic ethers on mice. The results obtained are superior to those achieved by the connectivity index.
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 32 (1987), S. 13-14 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
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    International Journal of Quantum Chemistry 32 (1987), S. 89-97 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Ab initio self-consistent-field electronic state calculations have been carried out for an interstitial-iron-substitutional-boron impurity pair complex in silicon. The calculations do not provide support for the currently accepted microscopic ionic model for the pair. Rather, we have shown that the covalent effects play a basic role in determining the physical properties of the complex.
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    International Journal of Quantum Chemistry 32 (1987), S. 115-129 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: By analyzing the convergence properties of the lattice sums in the exchange part of the restricted Hartree-Fock orbital energy, we isolate the source of the nonanalytic behavior of a partially occupied band at the Fermi energy. This analysis shows how an extended system behaves qualitatively differently from a finite system but also provides a possibility of following the development of nonanalyticity as the size of the system grows.
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    International Journal of Quantum Chemistry 32 (1987), S. 163-170 
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    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The aromatic (A) and quinoid (Q) forms of polythiophene (PT) have entirely different energy gaps: ∼0.5 eV for the quinoid form and ∼2 eV for the aromatic form, respectively. The energy gaps and stability of derivatives of PT are studied by total MNDO geometry optimization using energy band theory for the total energy calculations followed by a Hückel energy band calculations to approximate the energy band structure. Addition of fused rings to PT reverses the order of stability of the aromatic and quinoid isomers and the ordering in the size of the energy gaps. Small energy gap polymers are suggested on the basis of the calculations.
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    International Journal of Quantum Chemistry 32 (1987), S. 191-198 
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Chemical reactions and conformational changes of N-atom systems can be described as displacements in a (3N-6)-dimensional metric configuration space M provided with a global metric. Although space M has a metric, it is not in general a vector space; it is a topological space. In contrast to the commonly used internal configuration spaces based on bond length/bond angle internal coordinates, and having no global metrics, within space M each internal configuration of the nuclei of the molecule corresponds to one and only one point of the space. This property of M is advantageous when analyzing chemical reactions. The global metric of M ensures that differences between any two internal configurations can be interpreted as a distance in this space that allows one to provide M with coordinate systems by turning M into a manifold with boundary. Certain formal reaction paths show some counterintuitive behavior within this space: they may undergo a formal reflection at some points of M. A condition, the tangent criterion, is used for the diagnosis of such reaction paths and for the determination of special nuclear configurations where such reflections occur.
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