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  • Other Sources  (8)
  • American Institute of Physics
  • Nature Publishing Group
  • Periodicals Archive Online (PAO)
  • 2015-2019  (5)
  • 1980-1984  (3)
  • 1950-1954
  • 1945-1949
  • 2016  (5)
  • 1984  (1)
  • 1983  (2)
  • 1948
  • 1946
Collection
Source
Publisher
Years
  • 2015-2019  (5)
  • 1980-1984  (3)
  • 1950-1954
  • 1945-1949
Year
  • 1
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    Oceanic Fracture Zones (1984)
    Nature Publishing Group
    Details
    Publication Date: 2024-06-06
    Type: Article , PeerReviewed
    Format: text
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  • 2
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    Quorum sensing signal–response systems in Gram-negative bacteria (2016)
    Nature Publishing Group
    Details
    Publication Date: 2024-04-12
    Description: Bacteria use quorum sensing to orchestrate gene expression programmes that underlie collective behaviours. Quorum sensing relies on the production, release, detection and group-level response to extracellular signalling molecules, which are called autoinducers. Recent work has discovered new autoinducers in Gram-negative bacteria, shown how these molecules are recognized by cognate receptors, revealed new regulatory components that are embedded in canonical signalling circuits and identified novel regulatory network designs. In this Review we examine how, together, these features of quorum sensing signal–response systems combine to control collective behaviours in Gram-negative bacteria and we discuss the implications for host–microbial associations and antibacterial therapy.
    Type: Article , PeerReviewed
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  • 3
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    Advancing microbial sciences by individual-based modelling (2016)
    Nature Publishing Group
    Details
    Publication Date: 2023-12-21
    Description: Remarkable technological advances have revealed ever more properties and behaviours of individual microorganisms, but the novel data generated by these techniques have not yet been fully exploited. In this Opinion article, we explain how individual-based models (IBMs) can be constructed based on the findings of such techniques and how they help to explore competitive and cooperative microbial interactions. Furthermore, we describe how IBMs have provided insights into self-organized spatial patterns from biofilms to the oceans of the world, phage–CRISPR dynamics and other emergent phenomena. Finally, we discuss how combining individual-based observations with IBMs can advance our understanding at both the individual and population levels, leading to the new approach of microbial individual-based ecology (μIBE).
    Type: Article , PeerReviewed
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  • 4
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    Ray-trace modeling of acoustic Green's function based on the semiclassical (eikonal) approximation (2016)
    American Institute of Physics
    In:  Journal of the Acoustical Society of America, 140 (4). pp. 2695-2702.
    Details
    Publication Date: 2020-07-16
    Description: The Green's function (GF) for the scalar wave equation is numerically constructed by an advanced geometric ray-tracing method based on the eikonal approximation related to the semiclassical propagator. The underlying theory is first briefly introduced, and then it is applied to acoustics and implemented in a ray-tracing-type numerical simulation. The so constructed numerical method is systematically used to calculate the sound field in a rectangular (cuboid) room, yielding also the acoustic modes of the room. The simulated GF is rigorously compared to its analytic approximation. Good agreement is found, which proves the devised numerical approach potentially useful also for low frequency acoustic modeling, which is in practice not covered by geometrical methods.
    Type: Article , PeerReviewed
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  • 5
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    Solutions for quantifying P-value uncertainty and replication power (2016)
    Nature Publishing Group
    In:  Nature Methods, 13 (2). pp. 107-108.
    Details
    Publication Date: 2020-06-24
    Description: To the Editor: We congratulate Halsey et al. for their important discussion of the random nature of P values in an earlier issue of this journal1. P values from identical experiments can differ greatly in a way that is surprising to many2, 3, 4, 5, 6. The failure to appreciate this…
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  • 6
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    Harnessing the power of RADseq for ecological and evolutionary genomics (2016)
    Nature Publishing Group
    In:  Nature Reviews Genetics, 17 (2). pp. 81-92.
    Details
    Publication Date: 2020-06-23
    Description: High-throughput techniques based on restriction site-associated DNA sequencing (RADseq) are enabling the low-cost discovery and genotyping of thousands of genetic markers for any species, including non-model organisms, which is revolutionizing ecological, evolutionary and conservation genetics. Technical differences among these methods lead to important considerations for all steps of genomics studies, from the specific scientific questions that can be addressed, and the costs of library preparation and sequencing, to the types of bias and error inherent in the resulting data. In this Review, we provide a comprehensive discussion of RADseq methods to aid researchers in choosing among the many different approaches and avoiding erroneous scientific conclusions from RADseq data, a problem that has plagued other genetic marker types in the past.
    Type: Article , PeerReviewed
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  • 7
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    Giant squids may die when exposed to warm water currents (1983)
    Nature Publishing Group
    In:  Nature, 303 (5916). pp. 422-423.
    Details
    Publication Date: 2019-04-16
    Description: Strandings of the giant squid, Architeuthis monachus (Steen-strup), have always stirred attention because of the rarity and enormous size of these cephalopods. These animals have never been observed in their natural habitat and little is known about their physiology and ecology. Stranding of giant squids in Newfoundland waters has been correlated with the inflow of warm water, suggesting that increased temperature may be causing their death1. Squids have also been carried to the Norwegian coast with the warm North Atlantic current2 and on 23 August 1982 a live specimen was caught off Radöy near Bergen, Norway (Fig. 1). This catch gave an unprecedented opportunity to study the effects of temperature on the oxygen binding properties of blood from the giant squid. The present finding of an excess of a fourfold decrease in O2 affinity when temperature is increased from 6.4 to 15°C strongly suggests that giant squids may suffocate from arterial desaturation when increased ambient temperatures are experierced.
    Type: Article , PeerReviewed
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  • 8
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    Mantle plume noble gas component in glassy basalts from Reykjanes Ridge (1983)
    Nature Publishing Group
    In:  Nature, 305 (5933). pp. 403-407.
    Details
    Publication Date: 2016-11-23
    Description: Basalts from the Reykjanes Ridge contain noble gases delivered from the non-degassed lower mantle by the Iceland plume. These lower mantle gases are thought to be a mixture of planetary and solar components, as would be expected if the Earth accreted from fine silicate particles.
    Type: Article , PeerReviewed
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