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  • People  (22)
  • Chaotic advection  (1)
  • Cell & Developmental Biology
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  • Surface physics, nanoscale physics, low-dimensional systems
  • J&S Publishing Company, Inc.  (22)
  • Cambridge University Press  (2)
  • 2010-2014  (24)
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  • 2010-2014  (24)
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  • 1
    Publikationsdatum: 2022-05-26
    Beschreibung: Author Posting. © Cambridge University Press, 2013. This article is posted here by permission of Cambridge University Press for personal use, not for redistribution. The definitive version was published in Journal of Fluid Mechanics 738 (2014): 143-183, doi:10.1017/jfm.2013.583.
    Beschreibung: We investigate and quantify stirring due to chaotic advection within a steady, three-dimensional, Ekman-driven, rotating cylinder flow. The flow field has vertical overturning and horizontal swirling motion, and is an idealization of motion observed in some ocean eddies. The flow is characterized by strong background rotation, and we explore variations in Ekman and Rossby numbers, E and Ro, over ranges appropriate for the ocean mesoscale and submesoscale. A high-resolution spectral element model is used in conjunction with linear analytical theory, weakly nonlinear resonance analysis and a kinematic model in order to map out the barriers, manifolds, resonance layers and other objects that provide a template for chaotic stirring. As expected, chaos arises when a radially symmetric background state is perturbed by a symmetry-breaking disturbance. In the background state, each trajectory lives on a torus and some of the latter survive the perturbation and act as barriers to chaotic transport, a result consistent with an extension of the KAM theorem for three-dimensional, volume-preserving flow. For shallow eddies, where E is O(1), the flow is dominated by thin resonant layers sandwiched between KAM-type barriers, and the stirring rate is weak. On the other hand, eddies with moderately small E experience thicker resonant layers, wider-spread chaos and much more rapid stirring. This trend reverses for sufficiently small E, corresponding to deep eddies, where the vertical rigidity imposed by strong rotation limits the stirring. The bulk stirring rate, estimated from a passive tracer release, confirms the non-monotonic variation in stirring rate with E. This result is shown to be consistent with linear Ekman layer theory in conjunction with a resonant width calculation and the Taylor–Proudman theorem. The theory is able to roughly predict the value of E at which stirring is maximum. For large disturbances, the stirring rate becomes monotonic over the range of Ekman numbers explored. We also explore variation in the eddy aspect ratio.
    Beschreibung: L.J.P., I.I.R., T.M.O. and P.W. have been supported on DOD (MURI) grant N000141110087, administered by the Office of Naval Research. I.I.R. and L.J.P. received additional support from Grant NSF-OCE-0725796 from the National Science Foundation.
    Beschreibung: 2014-12-05
    Schlagwort(e): Chaotic advection ; Geophysical and geological flows ; Ocean processes
    Repository-Name: Woods Hole Open Access Server
    Materialart: Article
    Format: application/pdf
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  • 2
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Front cover of the John P. Trinkaus autobiography, "Embryologist"
    Beschreibung: Front cover includes the book title, "Embryologist: My eight decades in developmental biology', the author's name, "John Philip Trinkaus", and a black and white photograph of the author in a white t-shirt, wearing glasses, sitting at a microscope and grinning
    Beschreibung: Publications
    Schlagwort(e): People ; MBL courses
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 1 page
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  • 3
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Appendix III: The program for the symposium on cell movement and morphogenesis (Trinkfest '88)
    Beschreibung: Publications
    Schlagwort(e): People ; Community Events
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 3 pages
    Format: Application/pdf
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  • 4
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Preface to John P. Trinkaus' autobiography, "Embryologist". Preface written by John W. Saunders, Emeritus Professor of Biology at SUNY Albany
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 7 pages
    Format: Application/pdf
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  • 5
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 7 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: The Determintion Concept, Mixed Cell Aggergates, and the Neural Crest
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 22 pages
    Format: Application/pdf
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  • 6
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 12 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: Epilogue
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 19 pages
    Format: Application/pdf
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  • 7
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Appendix I: The bibliography of J.P. Trinkaus and associates
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 10 pages
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  • 8
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Appendix II: The scientific lineage of J.P. Trinkaus
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 4 pages
    Format: Application/pdf
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  • 9
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Acknowledgements section for John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 2 pages
    Format: Application/pdf
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  • 10
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 2 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: Bright College Years
    Beschreibung: Publications
    Schlagwort(e): People ; MBL courses
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 28 pages
    Format: Application/pdf
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  • 11
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 6 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: Fish Embryos: Epiboly and Embryo Culture
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 14 pages
    Format: Application/pdf
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  • 12
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 9 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: Rejuvenation of Research
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 17 pages
    Format: Application/pdf
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  • 13
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 5 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: Yale-The Early Years
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 26 pages
    Format: Application/pdf
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  • 14
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 3 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: Graduate Studies and the War
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 25 pages
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  • 15
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: The autobiography of developmental biologist John Philip Trinkaus
    Beschreibung: Publications
    Schlagwort(e): People ; MBL courses
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: Front and back covers, Foreward + Editor's Preface + Acknowledgements (pages vi-xviii), text (296 pages)
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  • 16
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 4 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: Return to Research and University Life
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 22 pages
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  • 17
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 11 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: "You can observe a lot by just watching." (Yogi Berra)
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 28 pages
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  • 18
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Editor's Preface to John P. Trinkaus' autobiography, "Embryologist". Preface written by Kurt Johnson, Professor of Anatomy and Cell Biology, George Washington University School of Medicine
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 4 pages
    Format: Application/pdf
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  • 19
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 8 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: Matters of Life-Small and Large
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 19 pages
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  • 20
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Title page, copyright information, and dedication for John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Publications
    Schlagwort(e): People ; MBL courses
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 3 pages
    Format: Application/pdf
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  • 21
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Index
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 12 pages
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  • 22
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 1 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: The Bad Boy begets the Biologist
    Beschreibung: Publications
    Schlagwort(e): People ; MBL courses
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 22 pages
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  • 23
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    J&S Publishing Company, Inc. | Marine Biological Laboratory | Arizona Board of Regents
    In:  Library of Jane Maienschein
    Publikationsdatum: 2023-01-12
    Beschreibung: Chapter 10 of John P. Trinkaus' autobiography, "Embryologist"
    Beschreibung: Chapter title: The Sixties
    Beschreibung: Publications
    Schlagwort(e): People
    Repository-Name: Woods Hole Open Access Server
    Materialart: Text
    Format: 28 pages
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  • 24
    Publikationsdatum: 2022-05-26
    Beschreibung: Author Posting. © Foundation for Environmental Conservation, 2009. This article is posted here by permission of Cambridge University Press for personal use, not for redistribution. The definitive version was published in Environmental Conservation 36 (2009): 268-276, doi:10.1017/S0376892910000032.
    Beschreibung: No-take marine reserves are widely recognized as an effective conservation tool for protecting marine resources. Despite considerable empirical evidence that abundance and biomass of fished species increase within marine reserve boundaries, the potential for reserves to provide fisheries and conservation benefits to adjacent waters remains heavily debated. This paper uses statistical and population models to evaluate published empirical data on adult spillover from marine reserves and shows that spillover is a common phenomenon for species that respond positively to reserve protection, but at relatively small scales, detectable on average up to 800 m from reserve boundaries. At these small scales, local fisheries around reserves were likely unsustainable in 12 of 14 cases without the reserve, and spillover partially or fully offsets losses in catch due to reserve closure in the other two cases. For reserves to play a role in sustaining and replenishing larger-scale fished stocks, networks of reserves may be necessary, but as few exist this is difficult to evaluate. The results suggest reserves can simultaneously meet conservation objectives and benefit local fisheries adjacent to their boundaries.
    Beschreibung: Support was provided by a grant from the David and Lucille Packard Foundation to NCEAS for ecosystem-based management ofmarine systems, the Partnership for Interdisciplinary Studies of Coastal Oceans (PISCO) funded by the David and Lucile Packard Foundation and the Gordon and Betty Moore Foundation (contribution number 348), the Sustainable Fisheries Group supported by the Paul G. Allen Family Foundation and the Bahamas Biocomplexity Project (US NSF Biocomplexity grantOCE-0119976) andUS EPA Science to Achieve Results (R832223).
    Schlagwort(e): Adult fish movement ; Fisheries ; Global ; Marine protected areas ; No-take reserves ; Spillover effect ; Synthesis
    Repository-Name: Woods Hole Open Access Server
    Materialart: Article
    Format: application/pdf
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