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  • Mixing  (5)
  • American Geophysical Union  (4)
  • Frontiers Media  (1)
  • American Institute of Physics (AIP)
  • Cambridge University Press
  • Periodicals Archive Online (PAO)
  • 2020-2023  (5)
  • 1935-1939
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  • 1
    Publication Date: 2022-12-24
    Description: Author Posting. © American Geophysical Union, 2022. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 127(7), (2022): e2021JC018333, https://doi.org/10.1029/2021JC018333.
    Description: As part of a project focused on the coastal fisheries of Isla Natividad, an island on the Pacific coast of Baja California, Mexico, we conducted a 2-1/2 year study of flows at two sites within the island's kelp forests. At one site (Punta Prieta), currents are tidal, whereas at the other site (Morro Prieto), currents are weaker and may be more strongly influenced by wind forcing. Satellite estimates of the biomass of the giant kelp (Macrocystis pyrifera) for this period varied between 0 (no kelp) and 3 kg/m2 (dense kelp forest), including a period in which kelp entirely was absent as a result of the 2014–2015 “Warm Blob” in the Eastern Pacific. During this natural “deforestation experiment”, alongshore velocities at both sites when kelp was present were substantially weaker than when kelp was absent, with low-frequency alongshore currents attenuated more than higher frequency ones, behavior that was the same at both sites despite differences in forcing. The attenuation of cross-shore flows by kelp was less than alongshore flows; thus, residence times for water inside the kelp forest, which are primarily determined by cross-shore velocities, were only weakly affected by the presence or absence of kelp. The flow changes we observed in response to changes in kelp density are important to the biogeochemical functioning of the kelp forest in that slower flows imply longer residence times, and, are also ecologically relevant in that reduced tidal excursions may lead to more localized recruitment of planktonic larvae.
    Description: The work we describe here was supported by NSF grants DEB 1212124, OCE 1416934, OCE 1736830, and OCE 2022927, by an equipment grant from the Kuwait Foundation for the Advancement of Sciences, and through grants from the Marisla Foundation, Packard Foundation, and Walton Family Foundation.
    Description: 2022-12-24
    Keywords: Kelp ; Tides ; Coastal circulation ; Mixing
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 2
    Publication Date: 2022-10-20
    Description: Author Posting. © American Geophysical Union, 2022. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 127(4), (2022): e2021JC018246, https://doi.org/10.1029/2021jc018246.
    Description: Storm surge barriers are increasingly being considered as risk mitigation measures for coastal population centers. During non-storm periods, permanent barrier infrastructure reduces the flow cross-sectional area and affects tidal exchange. Effects of barrier structures on estuarine tidal and salinity dynamics have not been extensively examined, particularly for partially mixed estuaries. A nested, high-resolution model is used to characterize impacts of a potential storm surge barrier near the mouth of the Hudson River estuary. Maximum tidal velocities through barrier openings are more than double those in the base case. Landward of the barrier, tidal amplitude decreases on average by about 6% due to increased drag. The drag coefficient with the barrier is about 5 times greater than the base case due primarily to form drag from flow separation at barrier structures rather than increased bottom friction. The form drag scales with barrier geometry similar to previous studies of flow around headlands. Tidal water levels are reduced particularly during spring tides, such that marsh inundation frequency is reduced up to 25%. Strong tidal velocities through barrier openings enhance salinity mixing locally, but overall mixing in the estuary decreases due to reduced tidal velocities. Correspondingly, stratification decreases near the barrier and increases landward in the estuary. The salinity intrusion length increases by 5%–15% depending on discharge due to the decreased mixing and increased exchange flow. Exchange flow increases near the barrier due reflux into the lower layer with the increased mixing, which has the potential to increase estuarine residence times.
    Description: Funding from Hudson Research Foundation (Award #003/19A).
    Description: 2022-10-11
    Keywords: Storm surge barrier ; Form drag ; Mixing ; Stratification ; Exchange flow ; Salinity intrusion
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 3
    Publication Date: 2022-10-26
    Description: © The Author(s), 2022. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Liu, S., Longnecker, K., Kujawinski, E., Vergin, K., Bolaños, L., Giovannoni, S., Parsons, R., Opalk, K., Halewood, E., Hansell, D., Johnson, R., Curry, R., & Carlson, C. Linkages among dissolved organic matter export, dissolved metabolites, and associated microbial community structure response in the northwestern Sargasso Sea on a seasonal scale. Frontiers in Microbiology, 13, (2022): 833252, https://doi.org/10.3389/fmicb.2022.833252.
    Description: Deep convective mixing of dissolved and suspended organic matter from the surface to depth can represent an important export pathway of the biological carbon pump. The seasonally oligotrophic Sargasso Sea experiences annual winter convective mixing to as deep as 300 m, providing a unique model system to examine dissolved organic matter (DOM) export and its subsequent compositional transformation by microbial oxidation. We analyzed biogeochemical and microbial parameters collected from the northwestern Sargasso Sea, including bulk dissolved organic carbon (DOC), total dissolved amino acids (TDAA), dissolved metabolites, bacterial abundance and production, and bacterial community structure, to assess the fate and compositional transformation of DOM by microbes on a seasonal time-scale in 2016–2017. DOM dynamics at the Bermuda Atlantic Time-series Study site followed a general annual trend of DOC accumulation in the surface during stratified periods followed by downward flux during winter convective mixing. Changes in the amino acid concentrations and compositions provide useful indices of diagenetic alteration of DOM. TDAA concentrations and degradation indices increased in the mesopelagic zone during mixing, indicating the export of a relatively less diagenetically altered (i.e., more labile) DOM. During periods of deep mixing, a unique subset of dissolved metabolites, such as amino acids, vitamins, and benzoic acids, was produced or lost. DOM export and compositional change were accompanied by mesopelagic bacterial growth and response of specific bacterial lineages in the SAR11, SAR202, and SAR86 clades, Acidimicrobiales, and Flavobacteria, during and shortly following deep mixing. Complementary DOM biogeochemistry and microbial measurements revealed seasonal changes in DOM composition and diagenetic state, highlighting microbial alteration of the quantity and quality of DOM in the ocean.
    Description: This project was funded by the Simons Foundation International’s BIOS-SCOPE program and US National Science Foundation (NSF OCE-1756105 for BATS cruises).
    Keywords: Dissolved organic matter ; Amino acids ; Metabolites ; Bacterioplankton ; Sargasso Sea ; Seasonal ; Mixing
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 4
    Publication Date: 2022-10-26
    Description: Author Posting. © American Geophysical Union, 2022. This article is posted here by permission of American Geophysical Union for personal use, not for redistribution. The definitive version was published in Journal of Geophysical Research: Oceans 127(5), (2022): e2021JC018056, https://doi.org/10.1029/2021jc018056.
    Description: As Arctic sea ice declines, wind energy has increasing access to the upper ocean, with potential consequences for ocean mixing, stratification, and turbulent heat fluxes. Here, we investigate the relationships between internal wave energy, turbulent dissipation, and ice concentration and draft using mooring data collected in the Beaufort Sea during 2003–2018. We focus on the 50–300 m depth range, using velocity and CTD records to estimate near-inertial shear and energy, a finescale parameterization to infer turbulent dissipation rates, and ice draft observations to characterize the ice cover. All quantities varied widely on monthly and interannual timescales. Seasonally, near-inertial energy increased when ice concentration and ice draft were low, but shear and dissipation did not. We show that this apparent contradiction occurred due to the vertical scales of internal wave energy, with open water associated with larger vertical scales. These larger vertical scale motions are associated with less shear, and tend to result in less dissipation. This relationship led to a seasonality in the correlation between shear and energy. This correlation was largest in the spring beneath full ice cover and smallest in the summer and fall when the ice had deteriorated. When considering interannually averaged properties, the year-to-year variability and the short ice-free season currently obscure any potential trend. Implications for the future seasonal and interannual evolution of the Arctic Ocean and sea ice cover are discussed.
    Description: This work was supported by the Postdoctoral Scholar Program at Woods Hole Oceanographic Institution, with funding provided by the Weston Howland Jr. Postdoctoral Scholarship. S. T. Cole was supported by Office of Naval Research grant N00014-16-1-2381.
    Description: 2022-10-14
    Keywords: Arctic ; Internal waves ; Mixing ; Sea ice ; Turbulence
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 5
    Publication Date: 2022-10-21
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Warner, J. C., Geyer, W. R., Ralston, D. K., & Kalra, T. Using tracer variance decay to quantify variability of salinity mixing in the Hudson River Estuary. Journal of Geophysical Research: Oceans, 125(12), (2020): e2020JC016096, https://doi.org/10.1029/2020JC016096.
    Description: The salinity structure in an estuary is controlled by time‐dependent mixing processes. However, the locations and temporal variability of where significant mixing occurs is not well‐understood. Here we utilize a tracer variance approach to demonstrate the spatial and temporal structure of salinity mixing in the Hudson River Estuary. We run a 4‐month hydrodynamic simulation of the tides, currents, and salinity that captures the spring‐neap tidal variability as well as wind‐driven and freshwater flow events. On a spring‐neap time scale, salinity variance dissipation (mixing) occurs predominantly during the transition from neap to spring tides. On a tidal time scale, 60% of the salinity variance dissipation occurs during ebb tides and 40% during flood tides. Spatially, mixing during ebbs occurs primarily where lateral bottom salinity fronts intersect the bed at the transition from the main channel to adjacent shoals. During ebbs, these lateral fronts form seaward of constrictions located at multiple locations along the estuary. During floods, mixing is generated by a shear layer elevated in the water column at the top of the mixed bottom boundary layer, where variations in the along channel density gradients locally enhance the baroclinic pressure gradient leading to stronger vertical shear and more mixing. For both ebb and flood, the mixing occurs at the location of overlap of strong vertical stratification and eddy diffusivity, not at the maximum of either of those quantities. This understanding lends a new insight to the spatial and time dependence of the estuarine salinity structure.
    Description: This study was funded through the Coastal Model Applications and Field Measurements Project and the Cross‐shore and Inlets Project, US Geological Survey Coastal Marine Hazards and Resources Program. Any use of trade, firm, or product names is for descriptive purposes only and does not imply endorsement by the US Government.
    Keywords: Hudson River Estuary ; Mixing ; Numerical modeling ; Tracer variance
    Repository Name: Woods Hole Open Access Server
    Type: Article
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