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  • Articles  (301)
  • Oxford University Press  (301)
  • 2020-2022
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  • 2011  (301)
  • ICES Journal of Marine Science  (96)
  • 88336
  • 1
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    Redundancy in metrics describing the composition, structure, and functioning of the North Sea demersal fish community (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Greenstreet, S. P. R., Fraser, H. M., Rogers, S. I., Trenkel, V. M., Simpson, S. D., and Pinnegar, J. K. 2012. Redundancy in metrics describing the composition, structure, and functioning of the North Sea demersal fish community. – ICES Journal of Marine Science, 69: 8–22. Broader ecosystem management objectives for North Sea demersal fish currently focus on restoring community size structure. However, most policy drivers explicitly concentrate on restoring and conserving biodiversity, and it has not yet been established that simply restoring demersal fish size composition will be sufficient to reverse declines in biodiversity and ensure a generally healthy community. If different aspects of community composition, structure, and function vary independently, then to monitor all aspects of community general health will require application of a suite of metrics. This assumes low redundancy among the metrics used in any such suite and implies that addressing biodiversity issues specifically will require explicit management objectives for particular biodiversity metrics. This issue of metric redundancy is addressed, and 15 metrics covering five main attributes of community composition, structure, and function are applied to groundfish survey data. Factor analysis suggested a new interpretation of the metric information and indicated that a minimum suite of seven metrics was necessary to ensure that all changes in the general health of the North Sea demersal fish community were monitored properly. Covariance among size-based and species-diversity metrics was low, implying that restoration of community size structure would not necessarily reverse declines in species diversity.
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  • 2
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    Advice under uncertainty in the marine system (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Dankel, D. J., Aps, R., Padda, G., Röckmann, C., van der Sluijs, J. P., Wilson, D. C., and Degnbol, P. 2012. Advice under uncertainty in the marine system. – ICES Journal of Marine Science, 69: 3–7. There is some uncertainty in the fisheries science–policy interface. Although progress has been made towards more transparency and participation in fisheries science in ICES Areas, routine use of state-of-the-art quantitative and qualitative tools to address uncertainty systematically is still lacking. Fisheries science that gives advice to policy-making is plagued by uncertainties; the stakes of the policies are high and value-laden and need therefore to be treated as an example of "post-normal science" (PNS). To achieve robust governance, understanding of the characteristics and implications of the scientific uncertainties for management strategies need to come to the centre of the table. This can be achieved using state-of-the-art tools such as pedigree matrices and uncertainty matrices, as developed by PNS scholars and used in similar science–policy arenas on other complex issues. An explicit extension of the peer community within maritime systems will be required to put these new tools in place. These new competences become even more important as many countries within the ICES Area are now embarking on new policies.
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  • 3
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    Quo Vadimus (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Browman, H.I. 2012. Quo Vadimus. – ICES Journal of Marine Science, 69: 1–2.
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  • 4
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    Age verification of boarfish (Capros aper) in the Northeast Atlantic (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Hüssy, K., Coad, J. O., Farrell, E. D., Clausen, L. A. W., and Clarke, M. W. 2012. Age verification of boarfish ( Capros aper ) in the Northeast Atlantic. – ICES Journal of Marine Science, 69: 34–40. The boarfish ( Capros aper ) is a pelagic species of recent interest to the fishing industry, with landings increasing by 〉500% over the past 3 years. The objective of the study was to provide a method for age determination based on whole sagittal otoliths, with the results to be used in stock assessment. Translucent zones laid down at regular intervals are identified by marginal increment analysis as seasonally recurring. Translucent zones are formed between September/October and March/April, regardless of fish age. The occurrence of the first annulus is validated by analysis of presumed daily growth increments. Subsequent annulus deposition is homogenous between individuals and allows general guidelines to be derived for interpreting the age of boarfish using their otoliths.
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  • 5
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    Impact of an anticyclonic eddy on the summer nutrient and chlorophyll a distributions in the Ulleung Basin, East Sea (Japan Sea) (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Kim, D., Yang, E. J., Kim, K. H., Shin, C-W., Park, J., Yoo, S., and Hyun, J-H. 2012. Impact of an anticyclonic eddy on the summer nutrient and chlorophyll a distributions in the Ulleung Basin, East Sea (Japan Sea). – ICES Journal of Marine Science, 69: 23–29. The impact of the anticyclonic Ulleung Warm Eddy (UWE) on the vertical distributions of nutrient and chlorophyll a (Chl a ) concentrations in the Ulleung Basin (UB) was investigated during the contrasting summers of 2005 and 2007. The physical structure of the water column was characterized by an intrathermocline eddy (ITE) in 2005, whereas the UWE remained distant from the sampling transect in 2007. Water column structures appeared to be highly stratified, and nutrients in the surface waters were totally depleted at all stations. In 2005, an exceptionally high concentration of Chl a (5.5 mg m –3 ) was measured below the surface mixed layer in the eddy core (station D3), and values of ~2.5 mg m –3 were observed at the eddy edge (stations D2 and D4). Formation of an ITE efficiently mixed surface and deep-ocean waters, the latter supplying sufficient nutrients to generate an extremely high concentration of Chl a at the base of the subsurface layer. Overall, the results indicated that the anticyclonic UWE plays a key ecological role in supporting substantial phytoplankton biomass in the nutrient-depleted surface waters in summer and maintaining high benthic mineralization in the deep-sea sediments of the UB.
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  • 6
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    Low levels of population genetic structure in the gilthead sea bream, Sparus aurata, along the coast of Italy (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Franchini, P., Sola, L., Crosetti, D., Milana, V., and Rossi, A. R. 2012. Low levels of population genetic structure in the gilthead sea bream, Sparus aurata , along the coast of Italy. – ICES Journal of Marine Science, 69: 41–50. The gilthead sea bream, Sparus aurata , is a coastal, commercially important fish. Contrasting results concerning the genetic structure of the species at different geographic scales have been reported. Here, an investigation is made into the population genetic structure of S. aurata along the coast of Italy, using samples analysed previously and material from new sampling sites (12) and using different microsatellite loci (10). One sample from the eastern Atlantic and three temporal replicates from one site were also included. The presence of a weak (overall F ST = 0.0072), but significant, genetic population subdivision was detected by F -statistics. Temporal replicates indicate genetic data consistency over time. Isolation by distance between the Atlantic and the coast of Italy is suggested by a Mantel test. The distributional pattern of genetic variance obtained by analysis of molecular variation reflects the geographic sampling areas, but is only partially congruent with the results obtained with fewer sites and loci. The dispersal of passive eggs/larvae by the main currents appears to contribute to shaping the gene flow. Given the intensity of sea bream aquaculture activities in Italy, the possibility that aquaculture may have partially contributed to the population genetic pattern detected cannot be excluded.
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  • 7
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    Escapement of silver-phase European eels, Anguilla anguilla, determined from fishing activities in a Mediterranean lagoon (Or, France) (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Charrier, F., Mazel, V., Caraguel, J-M., Abdallah, Y., Le Gurun, L. L., Legault, A., and Laffaille, P. 2012. Escapement of silver-phase European eels, Anguilla anguilla , determined from fishing activities in a Mediterranean lagoon (Or, France). – ICES Journal of Marine Science, 69: 30–33. Escapement of silver eels from a Mediterranean lagoon was estimated by a capture–tagging–recapture and automated tag-reading study. The population of silver-phase eels in the lagoon was estimated to be 13.2 kg ha –1 , with an escapement rate from the commercial fishery of 76.8%.
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  • 8
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    Defining fishing grounds with vessel monitoring system data (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Jennings, S., and Lee, J. 2012. Defining fishing grounds with vessel monitoring system data. – ICES Journal of Marine Science, 69: 51–63. Methods for defining fishing grounds to support marine spatial planning and management are developed, applied, and compared. The methods are broadly applicable and repeatable because they use vessel monitoring system (VMS) data that are archived and increasingly accessible. For several fleets at regional and national scales, an attempt is made to assess how the choice of criteria for defining grounds influences (i) size, shape, and location, (ii) overlap among grounds, and (iii) the extent to which annual and multi-annual patterns of fishing activity describe grounds used seasonally or by individual vessels. The results show that grounds defined by excluding infrequently fished margins (areas with 〈10% of total fishing activity) are typically 50% smaller than total fished area. However, landings weight or value (LWV) per unit activity can be higher at the margins, with 10% of activity usually accounting for 10–20% of LWV. The removal of fishing activity in the margins, as a consequence of regulation or fleet behaviour, would lead to disproportionately greater reductions in interactions with other fisheries, sectors, and the environment. Accessible high-resolution information on the "anatomy" of all fishing grounds would better inform debates on the allocation and the use of marine space and the integration of fisheries and environmental management.
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  • 9
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    Influence plots and metrics: tools for better understanding fisheries catch-per-unit-effort standardizations (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Bentley, N., Kendrick, T. H., Starr, P. J., and Breen, P. A. 2012. Influence plots and metrics: tools for better understanding fisheries catch-per-unit-effort standardizations. – ICES Journal of Marine Science, 69: 84–88. Standardization of catch per unit effort using generalized linear models (GLMs) is a common procedure that attempts to remove the confounding effects of variables other than abundance. Simple plots and metrics are described to assist understanding the standardization effects of explanatory variables included in GLMs, illustrated with an example based on New Zealand trevally ( Caranx lutescens ) data.
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  • 10
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    Improving management decisions by predicting fish bycatch in the Barents Sea shrimp fishery (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Aldrin, M., Mortensen, B., Storvik, G., Nedreaas, K., Aglen, A., and Aanes, S. 2012. Improving management decisions by predicting fish bycatch in the Barents Sea shrimp fishery. – ICES Journal of Marine Science, 69: 64–74. When the bycatch of juvenile fish within the Barents Sea shrimp fishery is too large, the area is closed to fishing for a certain period. Bycatch is estimated from sampled trawl hauls, for which the shrimp yield is recorded, along with the total number of various bycatch fish species. At present, bycatch estimation is based on a simple estimator, the sum of the number of fish caught within the area of interest within a small time window, divided by the corresponding shrimp yield (in weight). No historical data are used. A model-based estimation is proposed in which spatio-temporal models are constructed for the variation in both the yield of shrimp and the amount of bycatch in space and time. The main effects are described through generalized additive models, and local dependence structures are specified through correlated random effects. Model estimation includes historical and recent data. Experiments with both simulated and real data show that the model-based estimator outperforms the present simple estimator when a low or moderate number of samples (e.g. 〈20) is available, whereas the two estimators are equally good when the number of samples is high.
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  • 11
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    Modelling non-stationary natural mortality in catch-at-age models (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Jiao, Y., Smith, E. P., O'Reilly, R., and Orth, D. J. 2012. Modelling non-stationary natural mortality in catch-at-age models. – ICES Journal of Marine Science, 69: 105–118. Non-stationarity in the natural mortality of many species has been discussed among research scientists, but no generally applicable models/methods have been developed where a statistical catch-at-age (SCA) model framework is used. Using the Atlantic weakfish ( Cynoscion regalis ) fishery as an example, several SCA models are developed to assess the population dynamics, then compared. Models used included (i) an SCA with constant natural mortality, (ii) an SCA with unknown natural mortality, but with a hierarchical prior distribution from a mixture of distributions based on life-history information, (iii) an SCA with age-specific unknown natural mortality, (iv) an SCA with time-varying natural mortality, following a random-walk process, and (v) an SCA with age-specific time-varying natural mortality. The last two models imply that the population dynamics are not stationary. A Bayesian approach was used to estimate parameters, and performance of the models was compared through goodness-of-fit and the retrospective patterns of the models. A simulation study was then conducted to test the uncertainty resulting from model selection, the efficiency of using the best model selected based on deviance information criterion, and whether changes in natural mortality could be detected. An SCA with time-varying natural mortality, following a random-walk process, is proposed for the example fishery here. The estimated non-stationary temporal patterns in natural mortality were linked further to climate–ocean oscillation indices, to diagnose possible mechanisms/linkages to these temporal variations in natural mortality.
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  • 12
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    Bayesian spatial multispecies modelling to assess pelagic fish stocks from acoustic- and trawl-survey data (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Juntunen, T., Vanhatalo, J., Peltonen, H., and Mäntyniemi, S. 2012. Bayesian spatial multispecies modelling to assess pelagic fish stocks from acoustic- and trawl-survey data. – ICES Journal of Marine Science, 69: 95–104. A Bayesian spatial model was constructed to estimate the abundance of multiple fish species in a pelagic environment. Acoustic- and trawl-survey data were combined with environmental data to predict the spatial distribution of (i) the acoustic backscattering of fish, (ii) the relative proportion of each species, and (iii) their mean length in the Gulf of Finland in the northeastern Baltic Sea. By combining the three spatial model layers, the spatial distribution of the biomass of each species was estimated. The model consists of a linear predictor on environmental variables and a spatial random effect given by a Gaussian process. A Bayesian approach is a natural choice for the task because it provides a theoretically justified means of summarizing the uncertainties from various model layers. In the study area, three species dominate pelagic waters: sprat ( Sprattus sprattus ), herring ( Clupea harengus ), and three-spined stickleback ( Gasterosteus aculeatus ). Results are presented for each model layer and for estimated total biomass for each species in 2 x 2 km lattices. The posterior mean and central 95% credible intervals of total biomass were sprat 45.7 kt (27.7–71.6), herring 24.6 kt (9.7–41.3), and three-spined stickleback 1.9 kt (0.9–3.2).
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  • 13
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    Missing and presumed lost: extinction in the ocean and its inference (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Smith, W. K., and Solow, A. R. 2012. Missing and presumed lost: extinction in the ocean and its inference. – ICES Journal of Marine Science, 69: 89–94. The number of modern extinctions in the ocean is unknown. The actual demise of the last individual of a species is essentially unobservable, so extinction can only be inferred. Statistical methods are described for inferring extinction from sighting records, species–area considerations, and taxonomic samples collected at two different times. The methods are illustrated using a variety of real datasets, including a sighting record of the Caribbean monk seal and results from three surveys of benthic invertebrates.
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  • 14
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    Systematic conservation planning in the eastern English Channel: comparing the Marxan and Zonation decision-support tools (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Delavenne, J., Metcalfe, K., Smith, R. J., Vaz, S., Martin, C. S., Dupuis, L., Coppin, F., and Carpentier, A. 2012. Systematic conservation planning in the eastern English Channel: comparing the Marxan and Zonation decision-support tools. – ICES Journal of Marine Science, 69: 75–83. The systematic conservation approach is now commonly used for the design of efficient marine protected area (MPA) networks, and identifying these priority areas often involves using specific conservation-planning software. Several such software programmes have been developed in recent years, each differing in the underlying algorithms used. Here, an investigation is made into whether the choice of software influences the location of priority areas by comparing outputs from Marxan and Zonation, two widely used conservation-planning, decision-support tools. Using biological and socio-economic data from the eastern English Channel, outputs are compared and it is shown that the two software packages identified similar sets of priority areas, although the relatively wide distribution of habitat types and species considered offered much flexibility. Moreover, the similarity increased with increasing spatial constraint, especially when using real-world cost data, suggesting that the choice of cost metric has a greater influence on conservation-planning analyses than the choice of software. However, Marxan generally produced more efficient results and Zonation produced results with greater connectivity, so the most appropriate software package will depend on the overall goals of the MPA planning process.
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  • 15
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    Short-term choice behaviour in a mixed fishery: investigating metier selection in the Danish gillnet fishery (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Andersen, B. S., Ulrich, C., Eigaard, O. R., and Christensen, A-S. 2012. Short-term choice behaviour in a mixed fishery: investigating métier selection in the Danish gillnet fishery. – ICES Journal of Marine Science, 69: 131–143. The study presents a short-term effort allocation modelling approach based on a discrete choice random utility model combined with a survey questionnaire to examine the selection of métiers (a combination of fishing area and target species) in the Danish North Sea gillnet fishery. Key decision variables were identified from the survey questionnaire, and relevant proxies for the decision function were identified based on available landings and effort information. Additional variables from the survey questionnaire were further used to validate and verify the outcome of the choice model. Commercial fishers in a mixed fishery make use of a number of decision variables used previously in the literature, but also a number of decision parameters rarely explicitly accounted for, such as price, weather, and management regulation. The seasonal availability of individual target species and within-year changes in monthly catch ration were the main explanatory drivers, but gillnetters were also responsive to information on the whole fishery, fish prices, and distance travelled to fishing grounds. Heterogeneous responses were evident from geographic differences in home harbour, which underpins the need to understand alternative fishing strategies among individual gillnetters better.
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  • 16
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    Multifrequency target strength of northern krill (Meganyctiphanes norvegica) swimming horizontally (2011)
    Oxford University Press
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    Publication Date: 2011-12-08
    Description: Calise, L., and Knutsen, T. 2012. Multifrequency target strength of northern krill ( Meganyctiphanes norvegica ) swimming horizontally. – ICES Journal of Marine Science, 69: 119–130. Multifrequency acoustic measurements on ex situ horizontally swimming krill were made in a novel experimental setting. An ensemble of northern krill ( Meganyctiphanes norvegica ) was introduced to a large enclosure (a mesocosm), and acoustic backscatter was sampled using a multifrequency (70, 120, and 200 kHz) echosounder (Simrad EK60). Two submerged lamps were placed at opposite sides of the mesocosm and switched on and off to induce the krill, by light attraction, to swim horizontally through the acoustic beams. By tracking echoes, animal displacement, swimming speed, and target strength ( TS ) by frequency were estimated. The dominant and secondary modes of the total-length distribution were 21.8 ± 3.0 and 27.8 ± 2.7 mm, respectively. Although krill orientation was assumed stable and the ping rate was high, the range and inter-ping variability of the average TS values were large, decreasing and increasing with frequency, respectively. The overall TS frequency response observed and concurrent measurements at 120 and 200 kHz confirm the theoretical expectation that the acoustic backscatter from the investigated organisms were confined to the Rayleigh and Geometric scattering regions, a finding that might both aid acoustic identification and size-group separation of in situ northern krill.
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  • 17
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    F R Harden Jones (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
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  • 18
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    Microsatellite DNA reveals population genetic differentiation among sprat (Sprattus sprattus) sampled throughout the Northeast Atlantic, including Norwegian fjords (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Glover, K. A., Skaala, Ø., Limborg, M., Kvamme, C., and Torstensen, E. Microsatellite DNA reveals population genetic differentiation among sprat ( Sprattus sprattus ) sampled throughout the Northeast Atlantic, including Norwegian fjords. – ICES Journal of Marine Science, 68: 2145–2151. Sprat ( Sprattus sprattus ), small pelagic shoaling fish, were sampled from the Celtic, North, and Baltic seas, and 10 Norwegian fjords. Significant overall genetic differentiation was observed among samples when analysed with eight microsatellite DNA loci (Global F ST = 0.0065, p 〈 0.0001). The greatest genetic differences were observed between the Baltic and all other samples (largest pairwise F ST = 0.043, p 〈 0.0001). No significant genetic differentiation was observed between a sample from the Celtic Sea (CEL) and the North Sea (NSEA; F ST = 0.001, p = 0.16), but variable levels of genetic differentiation were observed among samples collected from Norwegian fjords (pairwise F ST ranging from 0 to 0.0096, most non-significant). All fjord samples were significantly differentiated to NSEA and CEL samples. Further, all fjord samples displayed reduced allelic richness compared with NSEA and CEL samples. Clearly, sprat display population genetic differentiation throughout the Northeast Atlantic, and there may be limited connectivity between Norwegian fjord and sea-going populations.
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  • 19
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    An investigation of human vs. technology-induced variation in catchability for a selection of European fishing fleets (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Mahévas, S., Vermard, Y., Hutton, T., Iriondo, A., Jadaud, A., Maravelias, C. D., Punzón, A., Sacchi, J., Tidd, A., Tsitsika, E., Marchal, P., Goascoz, N., Mortreux, S., and Roos, D. 2011. An investigation of human vs. technology-induced variation in catchability for a selection of European fishing fleets. – ICES Journal of Marine Science, 68: 2252–2263. The impact of the fishing effort exerted by a vessel on a population depends on catchability, which depends on population accessibility and fishing power. The work investigated whether the variation in fishing power could be the result of the technical characteristics of a vessel and/or its gear or whether it is a reflection of inter-vessel differences not accounted for by the technical attributes. These inter-vessel differences could be indicative of a skipper/crew experience effect. To improve understanding of the relationships, landings per unit effort (lpue) from logbooks and technical information on vessels and gears (collected during interviews) were used to identify variables that explained variations in fishing power. The analysis was undertaken by applying a combination of generalized additive models and generalized linear models to data from several European fleets. The study highlights the fact that taking into account information that is not routinely collected, e.g. length of headline, weight of otter boards, or type of groundrope, will significantly improve the modelled relationships between lpue and the variables that measure relative fishing power. The magnitude of the skipper/crew experience effect was weaker than the technical effect of the vessel and/or its gear.
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  • 20
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    Bycatch in South Africa's inshore trawl fishery as determined from observer records (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Attwood, C. G., Petersen, S. L., and Kerwath, S. E. 2011. Bycatch in South Africa's inshore trawl fishery as determined from observer records. – ICES Journal of Marine Science, 68: 2163–2174. Ship-based observer data were analysed to describe the volume, composition, utilization, and size structure of catches made by South Africa's inshore trawlers. The sampling rate was 3.5% of all trawls, including unsorted and discard samples. In all, 137 nominal species were recorded. Analysis of species composition separated the trawling grounds into seven areas, providing a framework for stratifying the ground for catch estimation and for selection of representative areas for conservation. The target species, Merluccius capensis and Austroglossus pectoralis , made up 58% of the pre-discard catch. Trachurus trachurus , Pterogymnus laniarius , Raja spp., and Chelidonichthys spp. constituted another 23%. Pre-discard catch volumes of the entire fleet were estimated. The average annual pre-discard catch of M. capensis and A. pectoralis was 9653 and 504 t, respectively, closely matching landing statistics. Argyrosomus inodorus , Rhabdosargus globiceps , Argyrozona argyrozona , and Atractoscion aequidens averaged 294, 230, 107, and 83 t annually, respectively, indicating significant overlap with the handline fishery for A. inodorus and A. argyrozona . A comparison of species composition in unsorted and discard samples revealed the species being preferentially retained. Argyrosomus inodorus and A. aequidens were trawled mainly below their size at maturity. Management needs to consider other species when determining catch or effort limits and area restrictions.
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    Estimation of total retained catch based on frequency of fishing trips, inspections at sea, transhipment, and VMS data (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Aanes, S., Nedreaas, K., and Ulvatn, S. 2011. Estimation of total retained catch based on frequency of fishing trips, inspections at sea, transhipment, and VMS data. – ICES Journal of Marine Science, 68: 1598–1605. The satellite-based vessel monitoring system in the Norwegian Economic Zone provides detailed information about individual trips by vessels. Vessel sizes are available through official registries, and the storage capacity for fish is estimated using the established conversion factors as a function of the vessel's gross registered tonnage. Scientists have had access to the database of both transport and fishing vessels, with records for individual trips, in addition to information about the total round weight (whole fish) of cod and haddock for trips inspected by the coastguard. The analysis assumes that trips with complete documentation of the fish on board are a random sample, so allowing estimation of the mean amount of both cod and haddock per trip, and annual totals give the number of trips per vessel annually. ICES has accepted this methodology for estimating illegal, unregulated, and unreported (IUU) catches, which has resulted in 15 000–166 000 t (3–35%) being added to the officially reported landings of Northeast Arctic cod during the years 2002–2008. IUU landings have decreased in recent years, but are so important for assessment and management that estimates continue to be made annually.
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    Fully documented fishery: a tool to support a catch quota management system (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Kindt-Larsen, L., Kirkegaard, E., and Dalskov, J. 2011. Fully documented fishery: a tool to support a catch quota management system. – ICES Journal of Marine Science, 68: 1606–1610. The Danish Government has proposed a catch quota management system (CQMS) in which fishers are obliged to report their total catches, including discards and landings, and both are counted against the formal total allowable catch (TAC). The success of a CQMS requires appropriate documentation to verify the total catch, the validity of scientific advice, and the implementation of the TACs through national catch quotas. A remote electronic monitoring (EM) system, providing full documentation of fishing operations and catches, was tested on six Danish fishing vessels operating under a CQMS for cod ( Gadus morhua ). The results showed that the EM system could provide the documentation required to support the CQMS and that it was an incentive for the participating fishers to avoid discarding cod. Changing from landings to total catch quotas would not affect the scientific-advisory processes of the International Council for the Exploration of the Sea (ICES), but it could have notable consequences for the allocation of TACs between countries.
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    Fishing and environment drive spatial heterogeneity in Celtic Sea fish community size structure (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Shephard, S., Gerritsen, H. D., Kaiser, M. J., Truszkowska, H. S., and Reid, D. G. 2011. Fishing and environment drive spatial heterogeneity in Celtic Sea fish community size structure. – ICES Journal of Marine Science, 68: 2106–2113. The Large Fish Indicator (LFI) is a univariate size-based indicator of fish community state that has been selected to support the OSPAR fish community Ecological Quality Objective (EcoQO). To operate this EcoQO, a survey-based LFI for each OSPAR region needs to be developed. However, fish communities in these regions are spatially heterogeneous, and there is evidence of within-region spatial variation in the LFI that could confound an overall indicator series. For Celtic Sea trawl-survey sites, spline correlograms indicate positive spatial autocorrelation at a similar range (~40 km) for the LFI and for fishing effort (h year –1 ) from vessel monitoring systems. Statistical models reveal a strong negative effect on annual LFI by site of fishing effort within a radius of 40 km. There was a weak effect of fishing within 20 km and no effect at 10 km. LFI also varied significantly with substratum and with local fish community composition identified by a resemblance matrix derived from the survey data. Finally, there was a weak effect of survey year on LFI. Spatial stratification of LFI calculations may be necessary when developing size-based indicators for OSPAR or Marine Strategy Framework Directive regions.
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    Spatially explicit estimation of fish length histograms, with application to anchovy habitats in the Bay of Biscay (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Petitgas, P., Doray, M., Massé, J., and Grellier, P. 2011. Spatially explicit estimation of fish length histograms, with application to anchovy habitats in the Bay of Biscay. – ICES Journal of Marine Science, 68: 2086–2095. Fish length frequency histograms from research surveys are of prime importance for identifying habitats of different life stages, as well as for stock assessment. However, no method has thus far been available for mapping these histograms as spatially varying curves. Here, a procedure is applied to map spatially connected curves, and detail is given on how it can be applied to map the length frequency histograms. At each sample location, a fish length frequency histogram is given as a vector of non-independent values. The histogram is first modelled as a polynomial expansion on the basis of orthogonal polynomials. Then, the polynomial coefficients are mapped by co-kriging, after fitting a model of co-regionalization. The length frequency map is finally derived by linearly combining maps of polynomial coefficients. An estimation variance associated with the map is also derived. Maps of anchovy length distributions are produced by applying the method to midwater trawl length data from the PELGAS acoustic surveys in the Bay of Biscay. This novel approach extends the application of kriging techniques to curves or functions, opening new perspectives for mapping more complex information than just the values of fish density.
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    Behaviour of Atlantic cod, a marine fish predator, during Atlantic salmon post-smolt migration (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Hedger, R. D., Uglem, I., Thorstad, E. B., Finstad, B., Chittenden, C. M., Arechavala-Lopez, P., Jensen, A. J., Nilsen, R., and Økland, F. 2011. Behaviour of Atlantic cod, a marine fish predator, during Atlantic salmon post-smolt migration. – ICES Journal of Marine Science, 68: 2152–2162. Acoustic telemetry was used to determine the behavioural strategies of Atlantic cod ( Gadus morhua ) during Atlantic salmon ( Salmo salar ) post-smolt migration within a Norwegian fjord (Eresfjord). In all, 38 adult cod captured in the inner fjord were tagged with acoustic transmitters in 2008 and 2009, and their behaviour was determined using a fixed hydrophone array. Cod tended to aggregate in the innermost part of the fjord, occupying distinct demersal home territories, showing horizontal movements consistent with foraging. Tidal influences were not observed; cod spent more time near the surface at night. Cod behaviour during peak post-smolt migration differed from that before and after migration. First, cod tended to have more-focused spatial distributions during peak post-smolt migration, consistent with them not having to forage so far when prey were available in abundance. Second, some half the cod were detected nocturnally (but rarely during daylight) near the river mouth during peak post-smolt migration, consistent with them feeding on nocturnally migrating post-smolts. Third, cod were more common near the surface, consistent with them feeding on post-smolts migrating through near-surface waters. These patterns, however, were not shown by all the cod, suggesting that this opportunistic feeder was also preying on other species.
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    Decadal-scale changes in southern California sciaenids under different levels of harvesting pressure (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Miller, E. F., Pondella II, D. J., Beck, D. S., and Herbinson, K. T. 2011. Decadal-scale changes in southern California sciaenids under different levels of harvesting pressure. – ICES Journal of Marine Science, 68: 2123–2133. A unique 38-year time-series of power-plant entrapment data collected across ~170 km of the southern California coastline was examined to describe the decadal-scale trends in common Southern California Bight sciaenid abundance in relation to oceanographic conditions. Adult catches for five of seven species declined at differing rates and severity. Declines of up to 94% were detected in historically common species such as Genyonemus lineatus , whereas historically less abundant species have increased dramatically, e.g. Umbrina roncador (2626%). Over time, the entrapped community became increasingly influenced by species with more southerly distributions, indicated by a significant decline in the average latitudinal midpoint of the community. This shift was significantly related to rising ocean temperature and took place in the early to mid-1980s. The observed species-specific abundance changes in all species except Atractoscion nobilis were significantly correlated with sea surface temperature, nearshore plankton volumetric biomass, G. lineatus or Seriphus politus nearshore larval density, or a combination of these. Patterns in A. nobilis abundance were the most isolated, likely reflecting its standing as an intensively fished species, unlike the other six species evaluated. The consistent relationship with environmental indices strongly supported the notion of a faunal shift driven by bottom-up forcing.
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    Relationships between fish stock changes in the Baltic Sea and the M74 syndrome, a reproductive disorder of Atlantic salmon (Salmo salar) (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Mikkonen, J., Keinänen, M., Casini, M., Pönni, J., and Vuorinen, P. J. 2011. Relationships between fish stock changes in the Baltic Sea and the M74 syndrome, a reproductive disorder of Atlantic salmon ( Salmo salar ). – ICES Journal of Marine Science, 68: 2134–2144. The M74 syndrome of Baltic salmon ( Salmo salar ), which appears as increased yolk-sac fry mortality (YSFM), impairs the reproduction of salmon stocks. Changes in the prey stocks of Baltic salmon in its two feeding areas, the southern Baltic Proper (BPr), where sprat ( Sprattus sprattus ) was the main prey species during the high incidence of M74, and the Bothnian Sea, where herring ( Clupea harengus ) is the dominant species, were analysed in relation to salmon growth and size and in relation to the incidence of M74. The high condition factor (CF 〉 1.05) of prespawning salmon predicted high YSFM. From the various stock factors of sprat and herring in the southern BPr, the biomass of sprat had the strongest positive relationships with the CF of prespawning salmon, and the total prey biomass with YSFM. It is concluded that the ample but unbalanced food resources for salmon in the BPr, primarily sprat, induce M74. By reducing the fishing pressure on cod ( Gadus morhua ) and by more effectively managing the sprat fishery in years when the cod stock is weak, the incidence of the M74 syndrome could be reduced and even prevented.
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    Commercial fisheries in the northwestern Gulf of Mexico: possible implications for conservation management at the Flower Garden Banks National Marine Sanctuary (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Levesque, J. C. 2011. Commercial fisheries in the northwestern Gulf of Mexico: possible implications for conservation management at the Flower Garden Banks National Marine Sanctuary. – ICES Journal of Marine Science, 68: 2175–2190. Marine resource managers designate marine protected areas (MPAs) to conserve, protect, and enhance fragile marine resources. A form of MPAs sometimes used by resource managers in the United States is a national marine sanctuary (NMS), and for all MPAs, managers need to use updated information during sanctuary management plan reviews (MPRs). In 2006, the Flower Garden Banks NMS (FGBNMS) began its first MPR by conducting public hearings and soliciting comments. Some 66% of comments were about the potential impacts fisheries posed to the sanctuary, so a description of commercial fishery activity in the NW Gulf of Mexico can help guide resource managers make sound, informed decisions. Despite limitations on data and knowledge of fishing effort spatially for the FGBNMS, commercial landings vary by Gulf state, area, and fishing gear, with most landings from the Louisiana and Texas coasts taken with trawls and nets. The main species landed from the NW Gulf of Mexico are shrimp, yellowfin tuna, and red snapper. Some conservation measures proposed for the FGBNMS will likely impact some commercial fisheries (hook and line, bottom longline), but not others (otter trawl, pelagic longline).
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    British grey seal (Halichoerus grypus) abundance in 2008: an assessment based on aerial counts and satellite telemetry (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Lonergan, M., Duck, C. D., Thompson, D., Moss, S., and McConnell, B. 2011. British grey seal ( Halichoerus grypus ) abundance in 2008: an assessment based on aerial counts and satellite telemetry. – ICES Journal of Marine Science, 68: 2201–2209. Recent estimates of the total size of the British grey seal population have been based on fitting age-structured models to estimates of pup production. The estimates were sensitive to whether density-dependence was considered to act on fecundity or pup survival. This study provides an alternative estimate for abundance in 2008: 91 800 animals (95% confidence interval, CI , 78 400–109 900). The estimate is consistent with the results of existing models where population density influences pup survival. It suggests that reductions in fecundity are unlikely to have been the cause of the recent slowing of the rate of growth of the population. The estimate presented is based on aerial surveys of the entire Scottish coast and the east coast of England. The surveys were carried out in August of 2007–2009 and restricted to the 2 h each side of daylight low water. Data from 107 electronic tags deployed between 1995 and 2008 were used to estimate the proportion of animals hauled out during the surveys. Overall, the animals hauled out for 31% (95% CI 15–50%) of the survey windows. No significant effects on the proportion of animals hauled out were detected from year, location, age, sex, temperature, rainfall, or the timing of low tide.
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    Fate of three Australian teleosts after ingesting conventional and modified stainless- and carbon-steel hooks (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: McGrath, S. P., Broadhurst, M. K., Butcher, P. A., and Cairns, S. C. 2011. Fate of three Australian teleosts after ingesting conventional and modified stainless- and carbon-steel hooks. – ICES Journal of Marine Science, 68: 2114–2122. In response to concerns over the fate of three Australian teleosts (mulloway, Argyrosomus japonicus , yellowfin bream, Acanthopagrus australis , and snapper, Pagrus auratus ) released with ingested recreational hooks, experiments were carried out to determine whether ejection could be promoted via different wire materials and/or their modification. Between 108 and 114 fish of each species were angled and allowed to ingest conventional or modified (with notches to reduce wire diameter by ~20%) J-hooks (~250 mm 2 ) made from three materials (stainless steel and nickel-plated and red-lacquer carbon steel), before being released into tanks and monitored with control fish for up to 61 d. Total mortalities were 35, 24, and 25% for mulloway (over 61 d), yellowfin bream (over 35 d), and snapper (over 41 d), respectively. Of the survivors, 30, 61, and 77%, respectively, ejected their hooks (and only one hook-ejected fish died). For yellowfin bream, hook ejection (and hence survival) was positively correlated with total length, and hook oxidation was the key predictor of ejection from mulloway and snapper, which could be promoted by selecting carbon-steel designs with narrow wire diameters and minimal protective coating. The choice of coating might also be important, with relatively greater mortality among mulloway and yellowfin bream that ingested nickel-plated hooks.
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    Ensuring representative economic data: survey data-collection methods in France for implementing the Common Fisheries Policy (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Van Iseghem, S., Quillérou, E., Brigaudeau, C., Macher, C., Guyader, O., and Daurès, F. 2011. Ensuring representative economic data: survey data-collection methods in France for implementing the Common Fisheries Policy. – ICES Journal of Marine Science, 68: 1792–1799. Since 2001, Ifremer has implemented an economic data collection programme (EDCP) within the Data Collection Framework of the EU. It aims to obtain economic data from a sample of vessels representative of the entire French fishing fleet. This paper presents the strategies used for vessel sampling selection in the French EDCP and its implementation over several consecutive years. The approach is illustrated by the sampling plan for the fleet in the North Sea Channel Atlantic region. We show that the EDCP allows precise economic indicators such as gross revenue or fuel costs to be estimated for the whole fishing fleet, including small vessels (〈10 m), and consequently, it facilitates sound scientific advice regarding the Common Fisheries Policy. The apparent underestimation of landings by small vessels in official statistics is highlighted.
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    Fishery-dependent information and the ecosystem approach: what role can fishers and their knowledge play in developing countries? (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Mathew, S. 2011. Fishery-dependent information and the ecosystem approach: what role can fishers and their knowledge play in developing countries? – ICES Journal of Marine Science, 68: 1805–1808. An ecosystem approach to fishery management is as much a mechanism to deal with the impact of fishing on targeted, associated, and dependent fish stocks, and on the habitat, as it is to deal with the impact of habitat degradation from natural and anthropogenic factors on fishing. In developing countries, often with little institutional capacity for generating timely and reliable information for managing fisheries, effective integration of the knowledge possessed by fishers and their communities regarding, for example, oceanographic, biological, economic, social, and cultural aspects can contribute to an ecosystem approach to fisheries. The challenge is to identify and validate such knowledge and to create policy and legal space to integrate it into management, also drawing upon good practice in industrialized countries. An attempt is made to identify such knowledge, to discuss its salient aspects, and to look at the conditions under which its practical value can be enhanced and integrated into formal fishery-management systems in developing countries.
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    Nearshore, seasonally persistent fronts in sea surface temperature on Red Sea tropical reefs (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Blythe, J. N., da Silva, J. C. B., and Pineda. J. 2011. Nearshore, seasonally persistent fronts in sea surface temperature on Red Sea tropical reefs. – ICES Journal of Marine Science, 68: 1827–1832. Temperature variability was studied on tropical reefs off the coast of Saudi Arabia in the Red Sea using remote sensing from Aqua and Terra satellites. Cross-shore gradients in sea surface temperature (SST) were observed, including cold fronts (colder inshore) during winter and warm fronts (warmer inshore) during summer. Fronts persisted over synoptic and seasonal time-scales and had a periodic annual cycle over a 10-year time-series. Measurements of cross-shore SST variability were conducted at the scale of tens of kilometres, which encompassed temperature over shallow tropical reef complexes and the continental slope. Two tropical reefs that had similar reef geomorphology and offshore continental slope topography had identical cold fronts, although they were separated by 100 km along the Red Sea coast of Saudi Arabia. Satellite SST gradients across contours of topography of tropical reefs can be used as an index to flag areas potentially exposed to temperature stress.
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    Multiyear variability of phytoplankton abundance in the Gulf of Maine (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Kane, J. 2011. Multiyear variability of phytoplankton abundance in the Gulf of Maine. – ICES Journal of Marine Science, 68: 1833–1841. Significant interannual changes in phytoplankton abundance were identified in the Continuous Plankton Recorder time-series collected in the Gulf of Maine from 1961 to 2008. Abundance levels of nearly all the common taxa began to increase in 1990 and remained elevated through 2001. During that period, total numbers were above average throughout the year, with an unusual bloom in late summer. Multivariate analysis of abundance identified three consecutive multiyear periods of varying abundance levels: low to average from 1961 to 1989, above average or very high from 1990 to 2001, and below average thereafter, through 2008. Phytoplankton abundance patterns were closely aligned to the rising trends displayed by several of the common zooplankton taxa. The North Atlantic Oscillation was the only environmental variable examined that showed some association with time-series abundance trends of plankton. The index was primarily positive in the 1990s, which would favour the propagation of warm, nutrient-rich slope water into the region. Perhaps the increased influx of this water, along with feedback enrichment from abundant zooplankton stocks and reduced top-down control by the relative scarcity of the dominant copepod Calanus finmarchicus , combined with a low salinity to make the 1990s a unique decade for plankton change in the Gulf of Maine.
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    Disruption of essential habitat by a coastal invader: new evidence of the effects of green crabs on eelgrass beds (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Malyshev, A., and Quijón, P. A. 2011. Disruption of essential habitat by a coastal invader: new evidence of the effects of green crabs on eelgrass beds. – ICES Journal of Marine Science, 68: 1852–1856. Eelgrass ( Zostera marina ) beds have been declining in Atlantic Canada and elsewhere, partly as a result of sediment disruption and direct feeding/cutting of basal meristems by the green crab ( Carcinus maenas ). Green crabs are detrimental to eelgrass beds, and field and laboratory experiments have confirmed that the deleterious role of this invasive species is mediated by at least two mechanisms, depending on the size/age of the crabs: uprooting by adults and grazing by juveniles. Eelgrass uprooting and grazing by green crabs are likely to contribute to further declines or a lack of recovery of eelgrass beds.
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    Epipelagic fish distributions in relation to thermal fronts in a coastal upwelling system using high-resolution remote-sensing techniques (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Reese, D. C., O'Malley, R. T., Brodeur, R. D., and Churnside, J. H. 2011. Epipelagic fish distributions in relation to thermal fronts in a coastal upwelling system using high-resolution remote-sensing techniques. – ICES Journal of Marine Science, 68: 1865–1874. Coastal upwelling systems are characterized by substantial spatial and temporal variability with respect to surface conditions, with fauna patchily distributed and high abundances in localized areas. Examining habitat associations on finer spatial scales than previous studies have been able to achieve would advance the understanding of important marine coastal ecosystems. This study evaluates the spatial and temporal relationships of single fish and fish schools with sea surface temperature (SST) fronts in the northern California Current upwelling system, using lidar (light detection and ranging) from an aircraft to sample surface waters over the continental shelf. High-resolution data were collected on the distribution of surface nekton and SST, then the locations of fish were analysed with respect to their proximity to SST fronts using GIS spatial analyses. Both fish schools and solitary fish were located significantly closer to fronts than would be expected by chance. The association of fish to fronts varied with the progression of the upwelling season such that fish associated less with fronts under stronger upwelling conditions. The relationships observed indicate the importance of thermal features to fish as a habitat component in a variable upwelling environment and have implications for management and conservation.
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    Age and growth of striped marlin (Kajikia audax) in the Southwest Pacific Ocean (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Kopf, R. K., Davie, P. S., Bromhead, D., and Pepperell, J. G. 2011. Age and growth of striped marlin ( Kajikia audax ) in the Southwest Pacific Ocean. – ICES Journal of Marine Science, 68: 1884–1895. This study describes the first validated model of age and growth developed for striped marlin ( Kajikia audax ). Daily periodicity of otolith microincrements was corroborated by back-calculated hatch dates that matched the known spawning season in the Southwest Pacific Ocean (SWPO). Yearly annulus formation in fin-spine sections was corroborated by daily otolith microincrements and by a marginal increment analysis. Ages of females ranged from 140 d to 8.5 years in fish between 990 mm and 2872 mm lower-jaw fork length (LJFL), and ages of males from 130 d to 7.0 years in fish between 1120 mm and 2540 mm LJFL. Sex-specific differences in growth were significant, with females growing to a larger asymptotic size and greater age than males. An instantaneous growth rate of 3.1 mm d –1 at 6 months and an estimated length of 1422–1674 mm LJFL by age 1 year makes this species among the fastest growing bony fish. Implications of these findings are discussed in relation to commercial longline and recreational fisheries management of striped marlin in the SWPO and in relation to the biology of pelagic fish growth.
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    Food and feeding habits of cod (Gadus morhua) on the Faroe Bank (2011)
    Oxford University Press
    Details
    Publication Date: 2011-11-24
    Description: Magnussen, E. 2011. Food and feeding habits of cod ( Gadus morhua ) on the Faroe Bank. – ICES Journal of Marine Science, 68: 1909–1917. Data from ten bottom surveys on the Faroe Bank during the years 1994–1998 are used to describe the feeding habits of cod on the Faroe Bank. Cod are clearly omnivorous in their diet. Overall, fish were found in 82% of the stomachs, accounting for 59% of the food by weight, but just 35% of the food items by number. Of the fish, lesser sandeel was the most common, making up 78% of the fish biomass consumed. Cannibalism was practically non-existent. In some years, the squid Loligo forbesi formed an important component of the diet, was the main food and identified in up to 64% of the stomachs, and constituting 60% by weight of the diet; in other years, it was a negligible part. Crustaceans were found in 48% of the stomachs, accounting for 16% by weight but as much as 44% by numbers. The diet of cod shifts ontogenetically, with stomach fullness greater and nutrient quality of prey higher for cod 〈70 cm.
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  • 39
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    Discrimination of wild and farmed Atlantic cod (Gadus morhua) based on morphology and scale-circuli pattern (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Uglem, I., Berg, M., Varne, R., Nilsen, R., Mork, J., and Bjørn, P. A. 2011. Discrimination of wild and farmed Atlantic cod ( Gadus morhua ) based on morphology and scale-circuli pattern. – ICES Journal of Marine Science, 68: 1928–1936. To evaluate the spatio–temporal distribution and ecological impacts of escaped farmed Atlantic cod ( Gadus morhua ), it is necessary that escapees can be traced in the wild. To do this, simple, reliable, and fast methods for determining the origin of cod are required. The aim of this proof-of-concept study was to evaluate whether simple analyses of scales and body morphology can distinguish between wild and farmed cod. Digital images of fish and scales from adult cod from two farms, and wild cod caught near these farms, were analysed by computer-based image analyses. By combining mean breadth of circuli and length-adjusted scale radius in a discriminant analysis, 86 and 80% of wild and farmed fish, respectively, were correctly classified. Moreover, using three simple morphometric measures representing dorsal fin size, neck curvature, and length of lower jaw, 100 and 95% of wild and farmed cod, respectively, were classified correctly. To validate these discrimination methods further, an expanded analysis of additional farmed and wild cod populations is required. The results pave the way for the development of a reliable and standardized methodology for classification of the origin of cod caught in the wild.
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    Utility of a spatial habitat classification system as a surrogate of marine benthic community structure for the Australian margin (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Przeslawski, R., Currie, D. R., Sorokin, S. J., Ward. T. M., Althaus, F., and Williams, A. 2011. Utility of a spatial habitat classification system as a surrogate of marine benthic community structure for the Australian margin. – ICES Journal of Marine Science, 68: 1954–1962. This study tests whether a continental-scale classification of Australian benthic habitats (termed "seascapes") and the interpolated environmental data from which they are derived are useful as abiotic surrogates of biodiversity at a local [tens of kilometres, Great Australian Bight (GAB)] and regional scale [hundreds of kilometres, Western Australian (WA) margin]. Benthic invertebrate community structure is moderately associated with specific seascapes in both the GAB ( R = 0.418) and WA margin (excluding hard substrata, R = 0.375; all substrata, R = 0.313). Mud content, seafloor slope, and seafloor temperature are significantly correlated with invertebrate communities at both scales, with disturbance and primary production correlated with GAB communities. Seascapes are not consistently useful surrogates because the strength and significance of relationships between seascapes and community structure differs among seascapes, regions, and spatial scales. Nevertheless, a national system of seascapes is an appropriate surrogate for broad-scale benthic invertebrate community patterns when biological data are limited, provided the uncertainty is acknowledged and, where possible, an assessment made of each seascape's ability to differentiate biological communities. Further refinement of seascape derivations may include updated and additional environmental data (particularly for hard vs. soft substrata) and validation among biological datasets from a range of habitats and scales.
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    Error patterns in age estimation of harp seals (Pagophilus groenlandicus): results from a transatlantic, image-based, blind-reading experiment using known-age teeth (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Frie, A. K., Fagerheim, K-A., Hammill, M. O., Kapel, F. O., Lockyer, C., Stenson, G. B., Rosing-Asvid, A., and Svetochev, V. 2011. Error patterns in age estimation of harp seals ( Pagophilus groenlandicus ): results from a transatlantic, image-based, blind-reading experiment using known-age teeth. – ICES Journal of Marine Science, 68: 1942–1953. Blind readings of known-age samples are the ultimate quality control method for age estimates based on hard tissues. Unfortunately, this is often not feasible for many species because of the scarcity of known-age samples. Based on a unique collection of known-age teeth of harp seals (age range: 1–18 years), ageing errors were evaluated in relation to true age, reader experience, sex, and tooth format (images vs. originals). Bias was estimated by linear models fitted to deviations from true age, and precision was estimated as their residual standard error. Image-based blind readings of 98 tooth sections by 14 readers, representing different levels of experience, generally showed high accuracy and precision up to a seal age of ~8 years, followed by an increasingly negative bias and increased variance. Separate analyses were therefore conducted for young seals (1–7 years) and older seals. For young seals, moderate associations were found between reader experience and levels of bias, precision, and proportions of correct readings. For older seals, only precision levels showed a significant association with reader experience. Minor effects of sex and tooth format are unlikely to affect these main patterns. Observed errors, even for highly experienced readers, may affect important age-related parameters, emphasizing the importance of known-age calibration of the output from all readers.
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    Delineating the habitat of demersal fish assemblages with acoustic seabed technologies (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: van der Kooij, J., Kupschus, S., and Scott, B. E. 2011. Delineating the habitat of demersal fish assemblages with acoustic seabed technologies. – ICES Journal of Marine Science, 68: 1973–1985. Habitats influence species distribution and, although the seabed is an important habitat factor for demersal species, traditional sampling methods often provide no practical solution to investigating the seabed over large areas. The ability of a multivariate method that utilizes single-beam acoustic seabed data combined with species composition data to define demersal fish habitats was tested. The best model explained 19.4% of the variance observed in the species data and was robust between years. Ten biotopes were identified, each containing species that, either alone or in combination with others, were indicative of that biotope. Using unclassified acoustic seabed data as explanatory variables, discrepancies between the numbers of acoustically distinct classes and species assemblages, as previously reported in the literature, were avoided, while utilizing their relationship with community structure. The study focused on the relationship between simultaneously recorded species composition and seabed data from fishing stations, but because continuous acoustic data along the survey tracks were available between stations, the model could be used to predict the spatial extent of the biotopes. Although the method was developed with the eventual aim of providing a meaningful foundation to the spatial management of mixed fisheries, it could also contribute to applications in spatial planning.
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    The frequency and quantity of Alaskan groundfish catcher-vessel landings made with and without an observer (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Faunce, C. H., and Barbeaux, S. J. 2011. The frequency and quantity of Alaskan groundfish catcher-vessel landings made with and without an observer. – ICES Journal of Marine Science, 68: 1757–1763. The North Pacific Groundfish Observer Programme (NPGOP) is one of the largest on-board fishery-monitoring programmes in the world, and the data are used extensively for both in- and post-season management of fisheries. Within certain limits, Alaskan fishers determine when and where to carry observers. There may be an incentive to fish differently during observed trips because (i) observed trips carry higher costs than unobserved trips, and (ii) bycatch quanta for quota deduction are estimated by applying bycatch rates from observed trips to retained catches on unobserved trips. Such differences may be manifest through the skewed deployment of observers among fisheries, i.e. a deployment effect, and through unrepresentative activities by fishers when an observer is on board, i.e. an observer effect. Despite long-standing concerns expressed over the NPGOP's 40-year history, evidence of deployment and observer effects have been based largely on anecdotal information. In 2008, database changes allowed a comparison of industry landing reports for trips with and without an observer. A deployment effect was evidenced by significant deviations from the expected landing ratios between observed and unobserved trips, and linear mixed-effect models revealed differences in the landed weight and evidence for an observer effect within two of five fisheries examined.
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    In situ measurements of target strength with optical and model verification: a case study for blue grenadier, Macruronus novaezelandiae (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Kloser, R. J., Ryan, T. E., Macaulay, G. J., and Lewis, M. E. 2011. In situ measurements of target strength with optical and model verification: a case study for blue grenadier, Macruronus novaezelandiae . – ICES Journal of Marine Science, 68: 1986–1995. In situ measurements of target strength ( TS ) of isolated fish surrounding dense schools need to be representative of the schooling fish to calculate their echo-integrated biomass. Using synchronous optical and acoustic measurements from a pelagic fishing net, the standard length (81 cm, n = 128), tilt-angle (–9°), and net-disturbed in situ TS (–34.4 dB) of Australian Macruronus novaezelandiae (blue grenadier) were confirmed at depth. In situ drift experiments of assumed undisturbed but dispersed blue grenadier recorded a mean TS of –31.8 dB ( CI –33.1 to –30.9 dB) with attributed fish standard lengths of 83 cm (s.d. 7.5 cm) and weight 2.5 kg. Modelling the gasbladder showed that uncertainties in fish length, orientation, and gasbladder size could explain the differences observed. Blue grenadiers have negative buoyancy because the cavity size of their gasbladder is smaller than the volume of gas required for neutral buoyancy at depth. For the same species and length, New Zealand hoki weigh less and have smaller gasbladders than Australian blue grenadier, suggesting a conversion factor of 1.10 in length for comparative measurements. Net-attached acoustic and optical measurements indicate that model and drift in situ measurements are biased high by 2.9 and 1.0 dB, respectively. Net-attached acoustic and optical measurements are a cost-effective method of monitoring TS routinely at depth for changes in species length and weight.
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    Potential contribution of the Internet to a global community of practice for fishery management (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Garcia, S. M. 2011. Potential contribution of the Internet to a global community of practice for fishery management. – ICES Journal of Marine Science, 68: 1800–1804. Managing complex socio-ecological fishery systems, following an Ecosystem Approach to Fisheries, calls for a broad range of information covering many components of the system, intensified sharing of data and knowledge (to accelerate social learning and adaptive management), and a much tighter collaboration between disciplines and stakeholders. I argue that the time has come to establish one or more communities of practice ( sensu Wenger) and that the Internet could be used efficiently for this purpose, enhancing the co-evolution of science and decision-making. Important Internet resources exist and can be mobilized, but the contribution of fishery science is still too fragmented and that of the fishing industry is embryonic. This paper suggests a web infrastructure that would facilitate the needed change.
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    The provision of fishery information by ICES-WGFTFB to assessment working groups: use of information and lessons learned (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Rihan, D., Graham, N., Reid, D. G., and Lordan, C. 2011. The provision of fishery information by ICES–WGFTFB to assessment working groups: use of information and lessons learned. – ICES Journal of Marine Science, 68: 1809–1814. ICES is now asked to provide advice that is more holistic in nature, including information on the influence and effects of human activities on the marine ecosystem. From a fishing-technology perspective, this includes information on how fishers respond and adapt to changes in regulatory frameworks, the impact of technology creep, ecosystem impacts, and changes in fleet dynamics. Recognizing the importance of this, in 2005, the ICES–Food and Agriculture Organization (FAO) Working Group on Fish Technology and Fish Behaviour (WGFTFB) began to collect data and information to support scientific advice on fisheries and ecosystem issues through a questionnaire circulated to its members. The information from the questionnaires was collated by the WGFTFB and submitted in the form of summary documents to various ICES assessment working groups. This paper describes the background to this initiative, the questionnaire structure, the type of information provided, and its utility.
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    Using qualitative and quantitative stakeholder knowledge: examples from European deep-water fisheries (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Lorance, P., Agnarsson, S., Damalas, D., des Clers, S., Figueiredo, I., Gil, J., and Trenkel, V. M. 2011. Using qualitative and quantitative stakeholder knowledge: examples from European deep-water fisheries. – ICES Journal of Marine Science, 68: 1815–1824. Stakeholder knowledge was collected through questionnaires and cognitive maps and used to summarize biological, environmental, technical, management, and socio-economic factors for several deep-water fisheries, identifying regional management issues and solutions. The questionnaires and cognitive maps revealed different technical, environmental, and management concerns in these fisheries. Dissatisfaction with management was more at an implementation than a conceptual level, because the existing management measures were mostly considered fit for purpose. Further, catch-and-effort data provided by the fishing industry were used to calculate standardized landings per unit effort. The results suggested different trends over time for three deep-water stocks exploited by the same fleet. The examples demonstrate how stakeholder involvement and use of qualitative knowledge and quantitative data might improve the management process and stock assessments when data are limited.
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    Improving marketability through translocation: a lobster case study from southern Australia (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Chandrapavan, A., Gardner, C., Green, B. S., Linnane, A., and Hobday, D. 2011. Improving marketability through translocation: a lobster case study from southern Australia. – ICES Journal of Marine Science, 68: 1842–1851. Translocation as a method to increase the value of less-marketable, deep-water southern rock lobster Jasus edwardsii was explored. First, variation in the commercially important shell colouration and body shape between deep- and shallow-water Tasmanian populations and among South Australian and Victorian populations was quantified. Deep-water J. edwardsii were pale in colour, with longer walking legs but less meat content than shallow-water, red-coloured J. edwardsii . Traits in body shape were variable among deep-water populations across the three states and between sexes in each population. Deep-water lobsters were then translocated to a shallow-water inshore reef to determine whether the observed variation in traits was plastic and whether translocation could be used to improve the quality of deep-water lobsters. Translocated lobsters were then monitored over a 14-month post-release period, and during this time, they changed from a pale/white colour to the more marketable red colour within a single moult. Plasticity was observed in tail morphology, but not in leg morphology. The translocation experiment was successful in transforming pale/white deep-water lobsters into red lobsters with higher market value in a phenotypic response to habitat manipulation. Translocation appears to have commercial application for exploiting natural plasticity in the market traits of lobsters to increase price.
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    Cephalopods in marine predator diet assessments: why identifying upper and lower beaks is important (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Xavier, J. C., Phillips, R. A., and Cherel, Y. 2011. Cephalopods in marine predator diet assessments: why identifying upper and lower beaks is important. – ICES Journal of Marine Science, 68: 1857–1864. Cephalopods are components of the diet of many predators worldwide. They are identified mainly using their chitinized upper and lower beaks, but because it has been assumed that the number of upper and lower beaks would be the same in predator diet samples, more effort has been put into creating keys for the lower beaks, which are more easily identifiable from morphology. A test is made of whether the number of upper and lower beaks differs in diet samples collected from a major cephalopod predator, the wandering albatross ( Diomedea exulans ), potential biases in the estimation of predator diets are assessed, and upper:lower beak ratios in published studies of other seabirds, seals, whales, and fish from different parts of the world reviewed. The ratio of upper to lower beaks in diet samples from wandering albatrosses varied greatly in a single year (from 69.6% more lower beaks to 59% more upper beaks), and between years (from 0.5 to 32.1% more upper beaks), and biases were greater for certain cephalopod species, resulting in underestimation of their relative importance. Future studies need to consider using both upper and lower beaks to improve the assessment of the contribution of different cephalopods to predator diets.
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    Biogeographic patterns of reef fish community structure in the northeastern Arabian Peninsula (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Burt, J. A., Feary, D. A., Bauman, A. G., Usseglio, P., Cavalcante, G. H., and Sale, P. F. 2011. Biogeographic patterns of reef fish community structure in the northeastern Arabian Peninsula. – ICES Journal of Marine Science, 68: 1875–1883. This study provides the first large-scale comparison of reef-associated fish communities in the northeastern Arabian Peninsula, with 24 sites spanning 〉3000 km of coastline in the southern Persian Gulf, the western Gulf of Oman, and the northwestern Arabian Sea, each with its own unique environmental conditions. Multivariate analyses revealed three distinct community types that were represented mainly by sites within each major water body, with 〉70% dissimilarity in community structure between each. Persian Gulf communities had low species richness, abundance, and biomass of reef fish compared with the other subregions, with communities dominated by herbivores and generalist predators that had little association with live coral. Reef fish biomass in the Gulf of Oman and Arabian Sea was comparable, and communities were dominated by fish with moderate coral association. However, there were relatively more herbivores and larger fish in the Arabian Sea than in the Gulf of Oman, where communities were dominated by planktivores. Species richness was highest in the Arabian Sea when differences in abundance among regions were accounted for. The influence of distinct environmental and oceanographic conditions on reef fish community structure in each of these areas is discussed.
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    The structure of demersal fish assemblages in a cold, highly stratified environment (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Chouinard, P-M., and Dutil, J-D. 2011. The structure of demersal fish assemblages in a cold, highly stratified environment. – ICES Journal of Marine Science, 68: 1896–1908. Fish are a major component of marine ecosystems, with many species co-occuring in the same habitats. Potential interactions among species and with the environment can be studied through the identification of species assemblages. Data from bottom trawl surveys (2004–2008) conducted in the estuary and northern Gulf of St Lawrence were analysed using multivariate methods (cluster, multidimensional scaling, and detrended canonical correspondence analysis) to describe the structure and composition of demersal fish assemblages, including rare and smaller non-commercial species. The spatial variability in environmental conditions that characterizes the study area has a significant impact on the composition of fish assemblages in the region. In all, 35 taxa were classified as key, and 6 main fish assemblages were described, based on catch in numbers. These assemblages had a coherent spatial distribution in the study area, associated with either depth, salinity and temperature, or dissolved oxygen. The analyses showed overall strong correlations between species abundance and prevalent environmental conditions and explained 18.4% of the variance in species abundance data and 79.2% of the variance in the species–environment relationship.
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    Intrastock differences in maturation schedules of Atlantic cod, Gadus morhua (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Wright, P. J., Millar, C. P., and Gibb, F. M. 2011. Intrastock differences in maturation schedules of Atlantic cod, Gadus morhua . – ICES Journal of Marine Science, 68: 1918–1927. Differences in maturation schedules from three subpopulations of North Sea cod ( Gadus morhua ) were examined using the demographic probabilistic maturation reaction norm (PMRN) approach. Declines in maturation probability with size and age were evident within the North Sea cod stock, but the magnitude of decline differed among subpopulations. The difference in the rate of decline led to significant spatial differences in recent times. Changes in maturation probability could not be explained by colonization from adjacent regions indicating a local response to conditions. The greatest decline in maturation probability followed the near collapse of regional spawning biomass during the 1980s and 1990s. A new methodology was developed to integrate the effects of temperature and competitive biomass into the estimation of the PMRN. Temperature had a positive effect on maturation probability, but could only partially explain the decreasing trend in PMRN midpoints. Consequently, regional selection for early maturing genotypes provides the most parsimonious explanation for the declines in maturation probability observed. The difference in maturation probability among North Sea cod subpopulations, and the additive contribution of temperature to the estimation of change, underscores the need to account for population structuring and to incorporate temperature as a covariate in future applications of the PMRN.
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    Lessons from the long-term management plan for northern hake: could the economic assessment have accepted it? (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Da Rocha, J-M., and Gutiérrez, M-J. 2011. Lessons from the long-term management plan for northern hake: could the economic assessment have accepted it? – ICES Journal of Marine Science, 68: 1937–1941. An economic working group was convened by the EU's Scientific, Technical and Economic Committee for Fisheries (STECF) in 2007 to evaluate the potential economic consequences of the long-term management plan for the northern hake ( Merluccius merluccius ) stock. An analysis of all the scenarios proposed by the biological assessment using the Economic Interpretation of ACFM Advice (EIAA) model showed that F at the status quo level was the best policy for both yield and profits, in terms of net present values. This result is counter-intuitive because it seems to suggest that effort costs do not influence economic indicators, whereas it is widely accepted that including costs negatively affects economic indicators. A dynamic age-structured model is applied to northern hake and shows that the optimal fishing mortality that maximizes the net present value of profits is 〈 F max . The reason why the EIAA analysis was biased towards scenarios with F 〉 F max is also shown.
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    Interpreting the large fish indicator for the Celtic Sea (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Shephard, S., Reid, D. G., and Greenstreet, S. P. R. 2011. Interpreting the large fish indicator for the Celtic Sea. – ICES Journal of Marine Science, 68: 1963–1972. The large fish indicator (LFI) was developed in the North Sea as a size-based indicator of fish community state. It is now established as OSPAR's fish community Ecological Quality Objective (EcoQO) metric and will be applied across all OSPAR regions. To produce a protocol for use when developing regional LFIs, the North Sea experience is interpreted using data from the Celtic Sea. Differences in fish community species composition and size distribution were reflected in a different species complex and large fish threshold (50 cm) for the Celtic Sea LFI. However, a lag of 12–14 years in the relationship between assemblage-averaged fishing mortality F com, y and the LFI suggested similar underlying ecological mechanisms to the North Sea. The indicator responded to changes in small fish biomass that follow fishing-induced changes in the level of predation by large demersal piscivores. The Celtic Sea LFI showed maximum observed values 〉0.40 before 1990, and 0.40 is here proposed as an EcoQO. Development of regional LFIs demands a flexible process rather than a strictly prescriptive protocol.
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    An overview of global catch statistics for inland fish (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Welcomme, R. L. 2011. An overview of global catch statistics for inland fish. – ICES Journal of Marine Science, 68: 1751–1756. The reported global inland fish catch passed 10 million tonnes in 2008, after almost linear growth from the early 1950s. The rise coincides with an increasing number of reports of falling catches resulting from environmental degradation. It is thought that catches from inland waters were underreported in the past because of constraints on collecting the relevant data. National approaches to data collection are not generally comparable and their accuracy not usually assessed. National data processing and reporting should be audited, and training undertaken to harmonize these activities. The apparently bigger catches probably result from better reporting of actual catches rather than any increase in the amount of fish landed. Current data are sufficient only for a general overview of global inland catches of fish, rather than for the detailed analysis needed for management, policy formulation, and the valuation of inland fisheries. There is a need for improved approaches to data collection and for historical catches to be corrected to account for changes in methodologies and reporting procedures.
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    Construction and first applications of a global cost of fishing database (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Lam, V. W. Y., Sumaila, U. R., Dyck, A., Pauly, D., and Watson, R. 2011. Construction and first applications of a global cost of fishing database. – ICES Journal of Marine Science, 68: 1996–2004. The development of a new global database of fishing cost is described, and an overview of fishing cost patterns at national, regional, and global scales is provided. This fishing cost database provides economic information required for assessing the economics of fisheries at various scales. It covers variable and fixed costs of maritime countries, representing ~98% of global landings in 2005. Linked to country and gear-type combinations, cost estimates can be mapped to a database of spatially allocated fisheries catches for future analysis in both spatial and temporal dimensions. The global average variable cost per tonne of catch in 2005 is estimated to range between US$639 and $1217, and the total cost per tonne from $763 to $1477, with mean values of $928 and $1120, respectively. The total global variable fishing cost is estimated to be in the range US$50–96 billion per year, with a mean of $73 billion per annum in 2005 dollar equivalents.
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    A comparison between industry and observer catch compositions within the Gulf of Alaska rockfish fishery (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Faunce, C. H. A 2011. comparison between industry and observer catch compositions within the Gulf of Alaska rockfish fishery. – ICES Journal of Marine Science, 68: 1769–1777. Stock assessment scientists and fishery managers operate under the necessary assumption that the identities of species in official catch reports are known without error. To test this assumption, the incidence, magnitude, and possible causes of species misidentification between industry and fishery-observer data sources were investigated for 29 rockfish landings made in Kodiak, AK. Rockfish species were misidentified in nearly all these landings, and the incidence of misidentification between data sources differed among species rather than the processing plant examined. Although observers failed to identify species recorded by processing plant staff as a result of small sampling fractions, the industry missed species that were identified by observers in more than half the offloads examined. The presence of management species complexes did not reduce the likelihood of erroneous quota debiting as a result of species misidentification. In one landing, the misidentification of the main rockfish species corresponded to the release of a weekly report on total allowable catch and resulted in a delayed fishery closure. Efforts to improve the accuracy of species identifications reported by industry in landing reports are warranted in Alaska, and methods to accomplish this through efficient deployment of observers are discussed.
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    Advocacy science and fisheries decision-making (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Rice, J. C. 2011. Advocacy science and fisheries decision-making. – ICES Journal of Marine Science, 68: 2007–2012. Science advice is supposed to meet idealistic standards for objectivity, impartiality, and lack of bias. Acknowledging that science advisors are imperfect at meeting those standards, they nonetheless need to strive to produce sound, non-partisan advice, because of the privileged accountability given to science advice in decision-making. When science advisors cease to strive for those ideals and promote advocacy science, such advice loses the right to that privileged position. There are temptations to shape science advice by using information that "strengthens" the conservation case selectively. Giving in to such temptation, however, dooms the advice; science advice becomes viewed as expressions of the biases of those who provide it rather than reflecting the information on which the advice is based. Everyone, including the ecosystems, loses. There are ways to increase the impact of science advice on decision-making that do not involve perverting science advice into advocacy: peer review by diverse experts, integrating advice on ecological, economic, and social information and outcomes, and focusing advisory approaches on risks, costs, and trade-offs of different types of management error. These approaches allow the science experts to be active, informed participants in the governance processes to aid sound decision-making, not to press for preselected outcomes. Everyone, including the ecosystems, wins.
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    Age determination in merobenthic octopuses using stylet increment analysis: assessing future challenges using Macroctopus maorum as a model (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Doubleday, Z. A., White, J., Pecl, G. T., and Semmens, J. M. 2011. Age determination in merobenthic octopuses using stylet increment analysis: assessing future challenges using Macroctopus maorum as a model. – ICES Journal of Marine Science, 68: 2059–2063. Stylet increment analysis (SIA) is a method recently developed to age octopuses; it involves the enumeration of daily growth increments within stylets (an internal shell). To examine the potential of SIA in a merobenthic octopus species, SIA was applied to Macroctopus maorum collected from southeast Australia and New Zealand ( n = 147). The stylets had clear concentric growth increments and a core-like region. However, low increment counts (≤224 d) produced non-feasibly high (≤21.7% body weight per day) instantaneous growth rates, based on the assumption that increment number relates to age (d). In the light of these results, the issues surrounding the application of SIA to merobenthic octopuses is discussed, particularly in relation to the lack of understanding in regard to stylet development in the early life history stages and the importance of validating age at first increment formation.
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    Is the management procedure approach equipped to handle short-lived pelagic species with their boom and bust dynamics? The case of the South African fishery for sardine and anchovy (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: de Moor, C. L., Butterworth, D. S., and De Oliveira, J. A. A. 2011. Is the management procedure approach equipped to handle short-lived pelagic species with their boom and bust dynamics? The case of the South African fishery for sardine and anchovy. – ICES Journal of Marine Science, 68: 2075–2085. Worldwide, small shoaling pelagic fish manifest rapid and substantial natural changes in abundance. Is the application of a management procedure (MP), evaluated using simulation tests [i.e. a MP approach otherwise known as management strategy evaluation (MSE)], to recommend total allowable catches (TACs) with constraints desired by industry on the extent of interannual changes viable for such resources, particularly given the customarily lengthy MP evaluation process? This question is examined by considering the rapid boom and then bust situation that arose for the South African fishery for sardine ( Sardinops sagax ) and anchovy ( Engraulis encrasicolus ) across the turn of the century. Novel adaptations to the MP in place at the time of the boom allowed enhanced resource use during the boom period without compromising the risk of unintended depletion of the populations. Importantly a two-tier threshold system allowed the normal constraints on the maximum extent of interannual TAC reduction to be modified when TACs rose above the specified thresholds. The general protocol underlying the application of MPs for South African fisheries proved sufficiently flexible for the approach to continue to be applied, despite the unanticipated rapid fish population boom and then bust experienced.
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    Climate-driven long-term trends in Baltic Sea oxygen concentrations and the potential consequences for eastern Baltic cod (Gadus morhua) (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Hinrichsen, H-H., Huwer, B., Makarchouk, A., Petereit, C., Schaber, M., and Voss, R. 2011. Climate-driven long-term trends in Baltic Sea oxygen concentrations and the potential consequences for eastern Baltic cod ( Gadus morhua ). – ICES Journal of Marine Science, 68: 2019–2028. Variations in oxygen conditions in the Baltic are influenced by several mechanisms. Generally, the frequency and magnitude of major inflows have been identified as the most crucial process for the renewal of oxygen-depleted water masses in the Baltic Sea. Furthermore, enhanced degradation of suspended organic matter by bacteria over the past few decades has increased oxygen consumption. Finally, the effects of large-scale climate warming are causing long-term variations in oxygen content and saturation as an observed increase in temperature has led to a general decrease in oxygen solubility of water masses. Oxygen-dependent relationships based on field data and laboratory experiments were used to analyse the impact of the observed decrease in oxygen content on eastern Baltic cod ( Gadus morhua ) stock-specific processes (e.g. survival rates of eggs, settlement probability of juveniles, habitat utilization of spawning fish, age structure of successful spawners, food consumption rates of adult fish). The observed long-term decline in oxygen conditions in the Baltic Sea has had a seemingly generally negative impact on oxygen-related processes for the different life stages of eastern Baltic cod. Experimentally derived results of oxygen-driven processes were validated by field data.
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    Evaluating a habitat template model's predictions of marine fish diversity on the Scotian Shelf and Bay of Fundy, Northwest Atlantic (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Fisher, J. A. D., Frank, K. T., Kostylev, V. E., Shackell, N. L., Horsman, T., and Hannah, C. G. 2011. Evaluating a habitat template model's predictions of marine fish diversity on the Scotian Shelf and Bay of Fundy, Northwest Atlantic. – ICES Journal of Marine Science, 68: 2096–2105. Habitat template models that integrate physical, chemical, and biological data have the potential to explain geographic variation in life-history traits within assemblages and to predict locations where species will be most vulnerable to anthropogenic impact. A previously developed model based on spatial variations in scope for growth (SG) and natural disturbance (ND) for the Scotian Shelf/Bay of Fundy was tested for its ability to predict fish life-history traits, species diversity, and community composition using trawl survey data. Of 30 dominant fish species, large, slow-growing ones most vulnerable to overexploitation tended to be found in naturally stable habitats. Among consistently co-occurring groups, functional differentiation, rather than similarity of life history, characterized assemblages, whereas among survey strata, species richness peaked at intermediate levels of ND and species evenness increased with average SG. Community composition was significantly correlated with both habitat variables, declined by 40% through time preceding structural changes on the eastern Scotian Shelf, but geographic distance, depth, and bottom temperature remained more strongly related to composition. The results revealed compelling matches between template predictions and patterns of fish species diversity, but low variation in diversity of life history, and mobility of fish may account for some of the weaker matches to model predictions.
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    Long-term hydrological and phytoplankton monitoring (1992-2007) of three potentially eutrophic systems in the eastern English Channel and the Southern Bight of the North Sea (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Lefebvre, A., Guiselin, N., Barbet, F., and Artigas, F. L. 2011. Long-term hydrological and phytoplankton monitoring (1992–2007) of three potentially eutrophic systems in the eastern English Channel and the Southern Bight of the North Sea. – ICES Journal of Marine Science, 68: 2029–2043. The spatial and main temporal variations in nutrient concentrations and phytoplankton abundance were investigated between 1992 and 2007 in the eastern English Channel and the Southern Bight of the North Sea, zones of consistent presence of Phaeocystis globosa and diatom blooms. Silicate and phosphate were the main nutrients potentially limiting phytoplankton growth, but the dynamics of the limitation seemingly differ between sites. Phosphate concentration showed a clear monotonic decreasing trend, whereas dissolved inorganic nitrogen and silicate trends were more complex. Nitrate was rarely or never a limiting factor. Results highlight three main periods with a Phaeocystis - or diatom-dominated system in the 1990s, and a more complex pattern in the 2000s. The composition of the phytoplanktonic community is described and an attempt made to establish a link between the community and its environment in terms of variability, shifts, and trends. The effects of larger- vs. regional-scale controlling factors are also discussed.
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    Marine spatial planning: achieving and evaluating integration (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Portman, M. E. 2011. Marine spatial planning: achieving and evaluating integration. – ICES Journal of Marine Science, 68: 2191–2200. Coastal states and nations are conducting marine spatial planning (MSP) at an ever-increasing pace. Some MSP efforts are aimed at planning areas at a subnational level, whereas others extend as far as 200 nautical miles from shore, within national exclusive economic zones. For planning of all types, but especially for planning in the marine realm, integration has become a sought-after norm now that traditional sectoral, single-issue management has not succeeded. Fisheries collapse, threats to marine biodiversity, and global climate change all support the case for greater integration in marine resource management and policy. The designation of boundaries can be related to the level of cross-sector and cross-jurisdictional integration achieved by MSP. The importance of scale and scope for MSP initiatives is examined, relating these aspects of plans and/or programmes to the levels of integration achieved, and a framework is suggested for evaluation. MSP initiatives in Portugal, the UK, and the USA serve as potential case studies for use of the framework.
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    Comment on: Cadrin et al. (2010) "Population structure of beaked redfish, Sebastes mentella: evidence of divergence associated with different habitats. ICES Journal of Marine Science, 67: 1617-1630" (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Makhrov, A. A., Artamonova, V. S., Popov, V. I., Rolskiy, A. Yu., and Bakay, Y. I. Comment on: Cadrin et al . 2011. "Population structure of beaked redfish, Sebastes mentella : evidence of divergence associated with different habitats. ICES Journal of Marine Science, 67: 1617–1630" – ICES Journal of Marine Science, 68: 2013–2015. An analysis of the genetic data used in the paper by Cadrin et al. (2010) indicates that they do not disprove the hypothesis of the existence of a single population of S. mentella in the Irminger Sea.
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    Disease profiles differ between non-fished and fished populations of edible crab (Cancer pagurus) from a major commercial fishery (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Bateman, K. S., Hicks, R. J., and Stentiford, G. D. 2011. Disease profiles differ between non-fished and fished populations of edible crab ( Cancer pagurus ) from a major commercial fishery. – ICES Journal of Marine Science, 68: 2044–2052. Despite their significant contribution to global marine fisheries, relatively little information is available on the pathogen profile of commercially exploited decapod crustacean populations. Most of the information published relates to adult (fished) subpopulations, with almost nothing known about disease processes and mortality drivers in juveniles. The seasonal profile of pathogens in non-fished (prerecruit) and fished (recruit) subpopulations of Cancer pagurus , a major target fishery target in European waters, is investigated. Histopathology and ultrastructural assessment of tissues demonstrated a distinct pathogen profile in the two subpopulations, the apparent prevalence of specific pathogens varying with both season and life stage of the host. In some cases, highly prevalent pathogens in the prerecruit subpopulation were not observed in the recruit subpopulation. In this context, the discovery of a novel and highly prevalent haplosporidian-like parasite infecting the antennal gland and bladder of prerecruit life stages of C. pagurus is reported. Co-infections with pathogens described previously, such as Hematodinium sp. and C. pagurus bacilliform virus, were also observed. Disease assessments in the prerecruit subpopulation of commercial decapod fishery targets could perhaps be utilized to improve the estimation of cohort success and, therefore, forecasts of future recruitment to the fishery.
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    Telomere length analysis in crustacean species: Metapenaeus macleayi, Sagmariasus verreauxi, and Jasus edwardsii (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Godwin, R. M., Frusher, S., Montgomery, S. S., and Ovenden, J. 2011. Telomere length analysis in crustacean species: Metapenaeus macleayi , Sagmariasus verreauxi , and Jasus edwardsii . – ICES Journal of Marine Science, 68: 2053–2058. Estimates of age and growth in crustaceans have been historically problematic and presented significant challenges to researchers. Current techniques of age determination provide valuable data, but also suffer from disadvantages. Telomeric DNA has been proposed as an age biomarker because it shortens with age in some species. In this study, the feasibility of using telomere length (TL) to estimate age was examined in the school prawn Metapenaeus macleayi and the spiny lobsters Sagmariasus verreauxi and Jasus edwardsii . Carapace length (CL) was used as a surrogate for age, and terminal restriction fragment assays were used to test the relationship between TL and size. Degradation of telomeric DNA with time during storage significantly influenced TL estimates, particularly for M. macleayi . TLs obtained from species in this study were 10–20 kb. No relationship between CL and TL was detected for any of the test species, and TL did not differ between male and female M. macleayi. TLs of J. edwardsii pueruli were unexpectedly shorter than those of J. edwardsii adults. The suitability of TL as an age biomarker in crustaceans may be limited, but further research is needed to elucidate telomere dynamics in these species with their different life histories and lifespans.
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    The specific gravity of mesopelagic fish from the northeastern Pacific Ocean and its implications for acoustic backscatter (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Davison, P. 2011. The specific gravity of mesopelagic fish from the northeastern Pacific Ocean and its implications for acoustic backscatter. – ICES Journal of Marine Science, 68: . Knowledge of the species present, their morphology, and their size distribution is required to infer biomass from acoustic surveys of fish. The gas content and specific gravity of the body (with gas removed), f , was measured for 71 species of mesopelagic fish in the NE Pacific Ocean. Those species that have functional swimbladders when large maintain constant f with increasing body size. Species without functional swimbladders as adults show decreased f with increasing body size. The acoustic-backscattering cross-section, bs , was modelled for all individuals collected from three fish species that differed in the presence of a gas-filled swimbladder. The change in bs with increasing body size was markedly different between the three. The low body density of those mesopelagic fish without gas-filled swimbladders greatly reduces their bs . In species of fish that possess a functional swimbladder as juveniles and in which the swimbladder regresses with growth, the bs first decreases, then increases with increased body size. Knowledge of the ontogenetic changes in swimbladder inflation and body density in mesopelagic fish is critical for the construction of the backscattering models used to interpret acoustic surveys.
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    Counter-comment on: Cadrin et al. (2010) "Population structure of beaked redfish, Sebastes mentella: evidence of divergence associated with different habitats. ICES Journal of Marine Science, 67: 1617-1630." (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Cadrin, S. X., Mariani, S., Pampoulie, C., Bernreuther, M., Daníelsdóttir, A. K., Johansen, T., Kerr, L., Nedreaas, K., Reinert, J., Sigurðsson, Þ., and Stransky, C. 2011. Counter-comment on: Cadrin et al. (2010) "Population structure of beaked redfish, Sebastes mentella : evidence of divergence associated with different habitats. ICES Journal of Marine Science, 67: 1617–1630." – ICES Journal of Marine Science, 68: 2016–2018. A one-stock hypothesis for S. mentella in the Irminger Sea was rejected in favour of one involving depth-segregated stock structure based on the best scientific information available, including recent genetic results. The depth-based hypothesis is maintained and supported, despite the criticisms by Makhrov et al. (2011) , which can all be explained and refuted.
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    An assessment of seabird-fishery interactions in the Atlantic Ocean (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Tuck, G. N., Phillips, R. A., Small, C., Thomson, R. B., Klaer, N. L., Taylor, F., Wanless, R. M., and Arrizabalaga, H. 2011. An assessment of seabird–fishery interactions in the Atlantic Ocean. – ICES Journal of Marine Science, 68: 1628–1637. Currently, 17 of 22 albatross species are listed as Vulnerable, Endangered, or Critically endangered by the International Union for the Conservation of Nature (IUCN). Incidental mortality in fisheries is by far the most widespread cause of the population declines observed for these and other closely related species. In 2006, the International Commission for the Conservation of Atlantic Tunas (ICCAT) requested an assessment of the threat from their fisheries to all seabirds that breed or forage within their jurisdiction. Methods were developed to assess the potential consequences of fishing for more than 60 populations of seabird. The assessment framework involved the identification of at-risk populations, overlap analyses, estimation of total bycatch, and an evaluation of the impact of the bycatch on key selected populations for which there were sufficient data on bird distribution and demography. These were the wandering and black-browed albatrosses of South Georgia and the Atlantic yellow-nosed and Tristan albatrosses of Gough Island. Summary results from the seabird assessment are presented, revealing that ICCAT longline fisheries catch substantial numbers of seabirds, with potentially significant conservation implications. If this mortality is not reduced, the numbers of breeding birds in some populations will continue to decline, threatening their long-term viability.
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    Silent ships do not always encounter more fish (revisited): comparison of acoustic backscatter from walleye pollock recorded by a noise-reduced and a conventional research vessel in the eastern Bering Sea (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: De Robertis, A., and Wilson, C. D. 2011. Silent ships do not always encounter more fish (revisited): comparison of acoustic backscatter from walleye pollock recorded by a noise-reduced and a conventional research vessel in the eastern Bering Sea. – ICES Journal of Marine Science, 68: 2229–2239. Vessel-induced avoidance behaviour is potentially a major source of error in surveys of fish populations. Noise-reduced research vessels have been constructed in an effort to minimize fish reactions to auditory stimuli produced by survey vessels. Here, measurements of acoustic backscatter from walleye pollock ( Theragra chalcogramma ) made on the eastern Bering Sea Shelf from the conventional NOAA ship "Miller Freeman" (MF) are compared with similar measurements made on the noise-reduced NOAA ship "Oscar Dyson" (OD). As in a previous study, acoustic abundance measurements from these vessels were equivalent during daylight, when large-scale acoustic surveying is conducted. However, significant differences were observed at night: on average, 44% more pollock backscatter was observed from OD than MF. Observations with a free-drifting echosounder buoy suggest that the night-time discrepancy is attributable to a stronger behavioural response to the passage of the louder MF, and a resulting decrease in pollock target strength. Pollock did not exhibit a strong reaction to the passage of OD. These observations are consistent with previous comparisons of these vessels, which show that with vessel differences, the noise-reduced OD detects more pollock.
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    The burden of proof in co-management and results-based management: the elephant on the deck! (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Fitzpatrick, M., Graham, N., Rihan, D. J., and Reid, D. G. 2011. The burden of proof in co-management and results-based management: the elephant on the deck! – ICES Journal of Marine Science, 68: 1656–1662. Results-based management requires that outcomes can be demonstrated by industry and verified by managers on behalf of society. The core questions are: what outcomes, and how can they be proved? Existing fishery approaches to reversing the burden of proof are examined with focus on how proof is demonstrated. Outcomes can be measured in situ (on the vessel) or ex situ (at the stock or ecosystem level). In situ measures are preferable because they give direct measurements, although they can be invasive and costly. Ex situ results are only observable on scales that make it difficult to attribute them to specific management measures, or they may be influenced by external factors. Three main environmental impacts caused by fishing are assessed with respect to how industry can assume the burden of proof. The combined use of vessel-monitoring systems and benthic-impact models may offer a practical solution to the problem of managing fishery impacts on the benthos. Three Irish fisheries are assessed in terms of the feasibility of reversing the burden of proof. There are limits to the extent to which industry can assume the burden of proof, and the concept of sharing the burden of proof could be more realistic.
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    The role of fisheries data in the development evaluation and impact assessment in support of European fisheries plans (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Simmonds, E. J., Döring, R., Daniel, P., and Angot, V. 2011. The role of fisheries data in the development evaluation and impact assessment in support of European fisheries plans. – ICES Journal of Marine Science, 68: 1689–1698. The European Commission has two formal requirements for developing multi-annual management plan policies: evaluation of the past performance of existing plans and impact assessments (IAs) of the potential benefits of new proposals. The new policies require the evaluation of fishery management in terms of three specific criteria: (i) effectiveness, i.e. the best method to achieve the objectives; (ii) efficiency, the cost-effectiveness, and proportionality; and (iii) consistency, i.e. limiting trade-offs across economic, social, and environmental domains. To develop policy, there is a need to collect relevant information, then to conduct appropriate analyses that provide documentation to support the policy objectives. This paper discusses the data requirements for good environmental, economic, and social understanding of fishery dynamics and management, describing how fishery data are currently linked to the analytical and management evaluation process using examples from 2009 and 2010. The type of information currently used is considered, along with the timetable of data availability, and its effect on historical evaluation and IAs, which are now formally required when any changes to legislation are proposed in the European Union, including following stakeholder consultation. The possibilities and future needs for such data are discussed.
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    Examining changes in Irish fishing practices in response to the cod long-term plan (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Davie, S., and Lordan, C. 2011. Examining changes in Irish fishing practices in response to the cod long-term plan. – ICES Journal of Marine Science, 68: 1638–1646. In 2009, there were marked changes in Irish demersal fishing effort owing to the implementation of a new cod long-term plan (CLTP). This replaced previous top-down cod recovery plans, first implemented in 2002, that set days-at-sea limits for fishing vessels. The new plan specifies a harvest control rule, annual effort ceilings for EU Member States, and rules for adapting fishing effort. It encourages cod avoidance, but leaves Member States to allocate effort between individual vessels. During 2009, effort was allocated through a series of pilot schemes in Ireland. These can be considered as an evolution towards co-management. Industry and state authorities worked closely together to develop strategies for effort management and cod avoidance. The impact of recent effort-management measures on the Irish fleet, fishery, and métiers affected by the CLTP is evaluated. Vessel movements within and between métiers are described and discussed, and unintended impacts resulting from the implementation of management schemes are highlighted. In future, possible fishers' responses to policy initiatives should be considered prior to implementation to minimize potentially adverse consequences.
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    Development and evaluation of a cpue-based harvest control rule for the southern and eastern scalefish and shark fishery of Australia (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Little, L. R., Wayte, S. E., Tuck, G. N., Smith, A. D. M., Klaer, N., Haddon, M., Punt, A. E., Thomson, R., Day, J., and Fuller, M. 2011. Development and evaluation of a cpue-based harvest control rule for the southern and eastern scalefish and shark fishery of Australia. – ICES Journal of Marine Science, 68: 1699–1705. Many fishery management agencies are adopting harvest control rules (HCRs) to achieve harvest policies and management objectives. HCRs, however, often require data-intensive stock assessments to facilitate the harvest prescription. An HCR based on catch and catch per unit effort (cpue) was developed for the southern and eastern scalefish and shark fishery of Australia, for stocks that lack the data needed to conduct a full statistical catch-at-age assessment. The HCR produces a recommended biological catch and is characterized by two parameters, target cpue and target catch, both derived from historical data. Simulation tests showed that the HCR could guide the stock to the desired state from different initial levels of depletion. However, the selection of parameter values for the HCR was critical. Achieving fishery objectives was difficult when the target catch was a function of recent catch, rather than data from a predefined historical reference period. Problems may also arise when specifying the reference period on which the HCR parameters are determined. The cpue-based HCR is a valuable tool for managing fisheries where monitoring and assessment activities are relatively expensive, or in general, where data are scarce.
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    Supply chaining fishery advice (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Connolly, P. L., and Caffrey, L. 2011. Supply chaining fishery advice. – ICES Journal of Marine Science, 68: 1706–1711. The supply chain concept helps underpin global commerce. In the fishery data arena, it is an underutilized tool that could benefit the business of fishery advice. Supply chain networks can lower operating costs and increase product availability, agility, and customer satisfaction. The EU's Data Collection Framework has consolidated and strengthened data collection in Europe, but inadequate data management undermines many stock assessments of fish through the lack of supply chaining. Commercial supply chain know-how, when implemented on solid enterprise architectures, can endow fishery advice with industrial-strength scrutiny, making it transparent, standardized, integrated, agile, consistent, accurate, and timely.
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    The ups and downs of working with industry to collect fishery-dependent data: the Irish experience (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Lordan, C., Ó Cuaig, M., Graham, N., and Rihan, D. 2011. The ups and downs of working with industry to collect fishery-dependent data: the Irish experience. – ICES Journal of Marine Science, 68: 1670–1678. Working with the fishing industry to collect fishery-dependent data for scientific and advisory purposes is essential in most countries, but despite the many advantages of working with fishers, it is not without challenges. The objectives and the ups and downs of 16 recent projects in Ireland are described, and four case studies are discussed in detail. Some common themes that characterize both successful and unsuccessful experiences are identified. One critical aspect is industry's sometimes unrealistic time-horizons and expectations when engaging in scientific data collection. Detailed communication of objectives, procedures, results, and relevance not only to industry representatives, but also to vessel owners and crew, is required throughout the life cycle of a project. For some projects, there is a clear need to include incentives in the design, but for others this is less critical. The critical needs for ongoing quality control and assurance, validation of data, and appropriate project design are discussed, along with the link between successful management systems and participatory research. Finally, comment is provided on how the expected reforms of the EU's Common Fisheries Policy will place new demands on joint research.
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    Data collection on the small-scale fisheries of Mexico (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Ramírez-Rodríguez, M. 2011. Data collection on the small-scale fisheries of México. – ICES Journal of Marine Science, 68: 1611–1614. To improve data collection and analysis of basic fishery statistics provided by Mexican small-scale fishers, the official fishery-information system was modified by codes for fishing sites and species that facilitate data handling when used for estimating exploitation patterns related to fleet behaviour (zones/seasons) and production (catch and value per species). This is exemplified by analysing the relative importance of 14 fisheries and the dynamics of the black ark fishery in Bahia Magdalena, Baja California Sur, México.
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    A revised target strength-length estimate for blue whiting (Micromesistius poutassou): implications for biomass estimates (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Pedersen, G., Godø, O. R., Ona, E., and Macaulay, G. J. 2011. A revised target strength–length estimate for blue whiting ( Micromesistius poutassou ): implications for biomass estimates. – ICES Journal of Marine Science, 68: 2222–2228. Acoustic abundance estimates of blue whiting have generally been higher than estimates based on catch data. One explanation has been that the relationship between acoustic target strength ( TS ) and length is too low and hence overestimates the number of fish. Measurements of TS were conducted during surveys of blue whiting in March/April 2003–2007 to the west of the British Isles from several different measurement platforms, and also during August 2005 in the Norwegian Sea. Results from these experiments confirm the view that the existing TS –length relationship is too low. A new TS –length relationship is proposed that is ~5 dB higher. Blue whiting TS is considerably higher than observed and modelled for a similar species, southern blue whiting ( Micromesistius australis ).
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    A methodology for acoustic and geospatial analysis of diverse artificial-reef datasets (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Kang, M., Nakamura, T., and Hamano, A. 2011. A methodology for acoustic and geospatial analysis of diverse artificial-reef datasets. – ICES Journal of Marine Science, 68: 2210–2221. A methodology is introduced for understanding fish-school characteristics around artificial reefs and for obtaining the quantitative relationship between geospatial datasets related to artificial-reef environments using a new geographic information system application. To describe the characteristics of fish schools (energetic, positional, morphological characteristics and dB difference range), acoustic data from two artificial reefs located off the coast of Shimonoseki, Yamaguchi prefecture, Japan, were used. To demonstrate the methodology of the geospatial analysis, diverse datasets on artificial reefs, such as fish-school characteristics, marine-environmental information from a conductivity, temperature, and depth sensor, information on artificial reefs, seabed geographic information, and sediment information around the reefs, were utilized. The habitat preference of fish schools was demonstrated quantitatively. The acoustic density of fish schools is described with respect to the closest distance from reefs and the preferred reef depths, the relationship between fish schools and environmental information was visualized in three dimensions, and the current condition of the reefs and their connection to seabed type is represented. This geospatial method of analysis can provide a better way of comprehensively understanding the circumstances around artificial-reef environments.
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    Auxiliary and focal assessment models: a proof-of-concept involving time-varying catchability and fishery stock-status evaluation (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Thorson, J. T. 2011. Auxiliary and focal assessment models: a proof-of-concept involving time-varying catchability and fishery stock-status evaluation. – ICES Journal of Marine Science, 68: 2264–2276. Many assessment models evaluate stock status, and biases can arise when time-varying processes are modelled as being time-invariant. An "auxiliary/focal" assessment process is presented, where an "auxiliary" assessment model estimates functional parameters that are used in a "focal" assessment of stock status. This process is evaluated in two steps. First, estimates of density-dependent catchability from single- or multispecies auxiliary models are compared, confirming that multispecies auxiliary models are more accurate when catch-at-age data are abundant. Possible output from the multispecies auxiliary assessment is then used in a focal model, and the results are compared with four other methods: (i) assuming that catchability is constant, (ii) ignoring fishery-dependent indices, (iii) a random-walk catchability model, and (iv) estimating density-dependent catchability without prior information. Results show that the constant catchability model leads to non-conservative biases in stock-status estimates, and a random-walk model decreases bias and has high precision when age data are available. The auxiliary/focal procedure performs best when fishery indices are used without age data, and the density-dependent model without prior information performs well with fishery and survey indices, but without age data. Different methods are optimal, therefore, depending on data availability, and the auxiliary/focal assessment process performs best of the available methods when using just fishery-dependent indices.
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    Accuracy of VMS data from Norwegian demersal stern trawlers for estimating trawled areas in the Barents Sea (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Skaar, K. L., Jørgensen, T., Ulvestad, B. K. H., and Engås, A. 2011. Accuracy of VMS data from Norwegian demersal stern trawlers for estimating trawled areas in the Barents Sea. – ICES Journal of Marine Science, 68: 1615–1620. The accuracy of vessel monitoring system (VMS) data, used to determine fishing activity in the trawl fishery for gadoids in the Barents Sea, was studied by observer notes and Global Positioning System (GPS) data from two Norwegian vessels in October 2007. A speed rule of 2–5 knots correctly classified 75–80% of the fishing activity and 85–90% of the non-fishing activity. Linear interpolation between hourly VMS recordings underestimated trawl trajectories by 15%. The median haulwise difference between the VMS and the GPS trajectories was ~500 m. The interpolated VMS data are appropriate for mapping the large-scale distribution of fishing effort and the area impacted, but to link fishing activities with small-scale mapping of benthos, more-frequent VMS-update times and more-refined interpolation techniques are required.
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    The advantages of an audit over a census approach to the review of video imagery in fishery monitoring (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Stanley, R. D., McElderry, H., Mawani, T., and Koolman, J. 2011. The advantages of an audit over a census approach to the review of video imagery in fishery monitoring. – ICES Journal of Marine Science, 68: 1621–1627. Technology-based fishery monitoring, or electronic monitoring (EM), has emerged as an alternative to human observers and is being applied in a variety of fisheries. The method records sensor and image data from fishing operations, so can be used to provide 100% monitoring of catches and fishing activity. Alternatively, EM can be used to audit catch data self-reported by harvesters. If the random audit indicates that these data are sufficiently accurate, they can provide useful catch estimates with less reviewing time and, hence, cost. The audit approach was adopted in the groundfish hook-and-line fishery in British Columbia, Canada, in 2006, and experience has shown that it can meet operational requirements for accuracy and timeliness. It is also more robust to the impact of equipment malfunction and can provide an independent estimate of total catch. Moreover, because catch estimates are derived from self-reported data rather than "black-box" records, the estimation process is more transparent and intuitive and, hence, more trusted by harvesters. Although cost reduction is always a primary concern, the audit approach offers significant additional benefits that should be considered in the design and implementation of EM programmes.
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    An introduction to the proceedings and a synthesis of the 2010 ICES Symposium on Fishery-Dependent Information (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Graham, N., Grainger, R., Karp, W. A., MacLennan, D. N., MacMullen, P., and Nedreaas, K. 2011. An introduction to the proceedings and a synthesis of the 2010 ICES Symposium on Fishery-Dependent Information. – ICES Journal of Marine Science, 68: 1593–1597. Current problems and issues concerning the collection and use of fishery-dependent information are reviewed and selected papers in the pages following highlight emergent findings in the field. Key issues include relationships between stakeholders, especially fishers and scientists, and how to develop these constructively, the increasing demands on the quality and range of data on fishing activities and exploitation rates needed to promote the ecosystem approach to fishery management, and technological advances that have allowed new approaches and insights.
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    Analysis of match-mismatch between commercial fishing periods and spawning ecology of Pacific halibut (Hippoglossus stenolepis), based on winter surveys and behavioural data from electronic archival tags (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Loher, T. 2011. Analysis of match–mismatch between commercial fishing periods and spawning ecology of Pacific halibut ( Hippoglossus stenolepis ), based on winter surveys and behavioural data from electronic archival tags. – ICES Journal of Marine Science, 68: 2240–2251. The fishery for halibut ( Hippoglossus stenolepis ) in the eastern Pacific is closed during the boreal winter, roughly corresponding to the seasonal spawning of the species. Opening and closing dates for each season are stipulated annually based on economics and biology. Historical surveys and data from electronic tags are analysed to assess the extent to which recent closures have encompassed the annual spawning cycle of the species, as defined by migration to offshore spawning sites, active spawning, and return to feeding areas. These were assessed by calculating mean maximum daily depth profiles for fish exhibiting seasonal migration, calculating the date-specific proportions of the tagged population either migrating to or resident on their feeding or spawning grounds, and examining the temporal distribution of spent and running fish in historical surveys along with evidence of spawning contained in high-resolution tag data. The data indicate that fishery closures over the past 20 years have been consistently too short to protect the entirety of a migration period that begins as early as September and is not substantially completed until May. Additionally, some recent season openings have encroached on the active spawning season. Failure to fully protect spawning migrations may allow seasonal interception fisheries, and the selective removal of early and late spawners could cause changes in stock demographics, restrict effective spawning, and influence long-term stock productivity, especially in the face of environmental variability.
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    Evaluating the effect of real-time closures on cod targeting (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Needle, C. L., and Catarino, R. 2011. Evaluating the effect of real-time closures on cod targeting. – ICES Journal of Marine Science, 68: 1647–1655. Under its Conservation Credits scheme to reduce cod mortality, the Scottish Government has implemented a system of real-time closures (RTCs) since 2008. These are relatively small, temporarily closed areas (50–225 square nautical miles per RTC, closed for 21 d) that are triggered by high cod catches. An important step in evaluating their effectiveness is to determine the response of vessels to RTCs, because the conservation benefit would be reduced if vessels moved to areas of greater cod abundance following closures. Abundance indices from research-vessel surveys and commercial-vessel observer trips are combined to create a time- and space-dependent relative cod-importance index (RCII). Vessel monitoring system data from Scottish vessels fishing during 2008/2009 are used to construct RCII profiles for each vessel, which are then used to determine whether the areas to which vessels move have a higher or a lower RCII, and how far away they move when an RTC is activated. We show that the RCII of the areas moved to tends to be lower than that of the RTC and that vessels travel farther when moving away from a closure than when moving back after reopening. Although not conclusive, this result indicates that RTCs may impact beneficially on cod mortality.
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  • 87
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    Using fishery-dependent data to inform the development and operation of a co-management initiative to reduce cod mortality and cut discards (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Holmes, S. J., Bailey, N., Campbell, N., Catarino, R., Barratt, K., and Gibb, A., and Fernandes, P. G. 2011. Using fishery-dependent data to inform the development and operation of a co-management initiative to reduce cod mortality and cut discards. – ICES Journal of Marine Science, 68: 1679–1688. The Scottish conservation credits scheme is a voluntary programme introduced in 2008, designed to reduce mortality and discarding of cod in line with EU Common Fisheries Policy management objectives. The scheme was expanded in 2009, building on the initial elements of real-time closures (RTCs) and gear requirements. Various measures were agreed in a co-management framework involving fishers, non-governmental organizations, government officials, and scientists. The main objective was to encourage cod avoidance and the reduction of cod discards using spatial tools such as RTCs and seasonal closures, along with gear options that reduce cod capture. The scheme was incentivized by rewarding participation with additional days at sea. Real-time monitoring was carried out with extensive use of fishery-dependent information, allowing management to be adapted as required and to address emerging problems. The use of vessel monitoring system data, logbook records, fishers’ knowledge, and observer data is described in terms of implementing and assessing the scheme. Compliance with the closure elements of the scheme was judged to have been good, and estimated catch rates by the Scottish fleet met target criteria, but the assessed catch savings of cod from RTCs were less than predicted. Modifications to the scheme were introduced for 2010, reflecting improved knowledge and experience.
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    Reducing uncertainty in the assessment and management of fish resources following an environmental impact (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Rotherham, D., Macbeth, W. G., Kennelly, S. J., and Gray, C. A. 2011. Reducing uncertainty in the assessment and management of fish resources following an environmental impact. – ICES Journal of Marine Science, 68: 1726–1733. The limitations of using information from commercial fisheries for assessing and managing resources and ecosystems are well known. Although fishery-independent data may overcome many such limitations, few studies have examined how incorporating data from different sources affects assessments and subsequent management decisions. Here, the value of integrating data from two types of sampling survey to assess the recovery of faunal populations following a severe fish-kill event in the Richmond River (New South Wales, Australia) in 2008 is evaluated. There is occasional large-scale mortality of fish and invertebrates in certain estuaries of eastern Australia following major flood events. In extreme cases, the management response involves closing an entire estuary to all fishing, to facilitate the recolonization and recovery of fish and other fauna. Decisions to resume normal fishing activities have environmental, economic, and social implications. Using lessons learned from a similar fish-kill event in 2001, it is shown how, in 2008, fishery-independent sampling, combined with improved sampling by commercial fishers, reduced uncertainty in decision-making and led to greatly improved socio-economic outcomes for stakeholders. The work highlights the need to examine the value of different sources of information to improve management decisions.
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    Quantifying causes of discard variability: an indispensable assistance to discard estimation and a paramount need for policy measures (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Depestele, J., Vandemaele, S., Vanhee, W., Polet, H., Torreele, E., Leirs, H., and Vincx, M. 2011. Quantifying causes of discard variability: an indispensable assistance to discard estimation and a paramount need for policy measures. – ICES Journal of Marine Science, 68: 1719–1725. Fishery-dependent data underpin the scientific advice given to fishery managers. However, discard estimates are often imprecise as a result of limited sampling coverage. Estimating discard rates from length frequency distributions (LFDs) in commercial catches may complement information from observer trips. The accuracy of estimates depends greatly on careful investigation of the discard variability. Here, the impact of three essential factors was quantified for beam-trawl fisheries in the southern North Sea: (i) market prices, (ii) landings per trip (LPT) limitations, and (iii) selectivity of the commercial fishing gear. Observed discard rates for cod, plaice, sole, and whiting were compared with estimates based on length frequency data, taking account of the variability attributable to LPT limitations and market price. Observed discard estimates of cod and whiting differed significantly from LFD-derived estimates because of highgrading. The results indicate that LFD-derived discard estimates are only reliable if the crucial driving factors are quantified. LFDs can be collected from research vessels or by fishers in partnership with scientists. Based upon many of these LFDs and the discard-variability factors identified in observer programmes, discard rates can be estimated better.
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    Do big boats tow big nets? (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Reid, D. G., Graham, N., Rihan, D. J., Kelly, E., Gatt, I. R., Griffin, F., Gerritsen, H. D., and Kynoch, R. J. 2011. Do big boats tow big nets? – ICES Journal of Marine Science, 68: 1663–1669. Fishing vessel capacity for trawlers is generally expressed in terms of length, tonnage, and engine power, assuming that a larger vessel has a greater fishing power. Management uses effort-control measures such as kW-day limits based on this assumption. Many studies have shown a weak and noisy relationship between effort and modelled catches, and explanatory models often require the inclusion of a skipper or vessel effect to explain the variance. A key element in this effect is the choice of gear size. Relationships are investigated between metrics of the vessel (length, tonnage, and power) and the gear towed (length of groundgear, or circumference of the net opening) in Scottish and Irish whitefish, Nephrops , and pelagic otter trawlers. Often, the vessel size did not correlate with that of the gear, or did so only for smaller vessels (〈1000 hp). The key implication is that effort management based on vessel metrics alone is not appropriate, because it is a poor predictor for gear size, and hence for fishing power. Effort restrictions may actually encourage the adoption of larger gears for a given vessel, to maximize the value of a limited-time resource.
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    The status of routine fishery data collection in Southeast Asia, central America, the South Pacific, and West Africa, with special reference to small-scale fisheries (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: de Graaf, G. J., Grainger, R. J. R., Westlund, L., Willmann, R., Mills, D., Kelleher, K., and Koranteng, K. 2011. The status of routine fishery data collection in Southeast Asia, central America, the South Pacific, and West Africa, with special reference to small-scale fisheries. – ICES Journal of Marine Science, 68: 1743–1750. The Food and Agriculture Organization (FAO) strategy for improving information on the status and trends of capture fisheries (FAO Strategy STF) was endorsed by Member States and the UN General Assembly in 2003. Its overall objective is to provide a framework, strategy, and plan to improve knowledge and understanding of the status and trends of fisheries as a basis for policy-making and management, towards conservation and sustainable use of resources within ecosystems. The FAO supports the implementation of FAO Strategy STF in developing countries through a project known as FAO FishCode–STF, and an initiative funded by the World Bank entitled the "BigNumbers project". The BigNumbers project underscored the importance of small-scale fisheries and revealed that catches by and employment in this sector tend to be underreported. An inventory of data collection systems made under the FAO FishCode–STF project showed that small-scale fisheries are not well covered. Their dispersed nature, the weak institutional capacity in many developing countries, and the traditional methods used make routine data collection cumbersome. Innovative sampling strategies are required. The main priority is a sample frame for small-scale fisheries. Sustainable strategies are most likely to be found outside the sector through population and agricultural household censuses and inside the sector through the direct involvement of fishers.
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    Evaluation of the design and efficiency of the Norwegian self-sampling purse-seine reference fleet (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Pennington, M., and Helle, K. 2011. Evaluation of the design and efficiency of the Norwegian self-sampling purse-seine reference fleet. – ICES Journal of Marine Science, 68: 1764–1768. A self-sampling reference fleet is employed by the Institute of Marine Research to estimate the characteristics of the Norwegian commercial catch for a number of species. The reference fleet is composed of commercial fishing vessels that are paid to measure a subsample of fish from selected catches and, less frequently, to take and preserve otolith, stomach, and genetic samples. In this study, the sampling design for monitoring the catches of herring, mackerel, and blue whiting used by the recently established purse-seine segment of the reference fleet is evaluated. The precision of the estimated mean lengths, and hence that of the estimated length distributions of the entire commercial catch, was bounded by the number of boats in the purse-seine reference fleet. Therefore, the only way to improve survey precision significantly is to increase the number of boats in the reference fleet. In addition, the effective sample sizes were much smaller than the total number of fish measured, from which it followed that too many fish were measured in each selected catch. Based on this analysis, the prescribed number of fish sampled from each selected catch has been reduced by more than 50%.
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    A method of detecting patterns in mean lengths of samples of discarded fish, applied to the self-sampling programme of the Dutch bottom-trawl fishery (2011)
    Oxford University Press
    Details
    Publication Date: 2011-11-24
    Description: Uhlmann, S. S., Bierman, S. M., and van Helmond, A. T. M. 2011. A method of detecting patterns in mean lengths of samples of discarded fish, applied to the self-sampling programme of the Dutch bottom-trawl fishery. – ICES Journal of Marine Science, 68: 1712–1718. In 2009, a self-sampling programme was organized in the Netherlands, fishers sampling ca. 80 kg of discards from randomly selected bottom trawls in the North Sea. A statistical procedure is proposed to highlight samples, trips (with multiple samples), or vessels (which may have multiple trips within a year) where extreme mean lengths of discarded fish were observed. Randomization methods were used to test for evidence of non-randomness in patterns of highlighted discard samples, e.g. repeated observations of extreme mean lengths for consecutive discard samples across trips from the same vessel. European plaice ( Pleuronectes platessa ), common dab ( Limanda limanda ), grey gurnard ( Eutrigla gurnardus ), and whiting ( Merlangius merlangus ) were considered because these were the most abundant species in most of the discard samples. A linear mixed model was used to estimate random-sample effects on the estimated mean lengths by species. These random effects were incorporated into uni- and bivariate procedures to identify extreme samples that were summed for each vessel, and the probability of observing such numbers was estimated. Excluding these samples from the dataset had marginal effects on estimated size distributions of fish.
    Print ISSN: 1054-3139
    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
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  • 94
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    The Irish Sea data-enhancement project: comparison of self-sampling and national data-collection programmes--results and experiences (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Hoare, D., Graham, N., and Schön, P-J. 2011. The Irish Sea data-enhancement project: comparison of self-sampling and national data-collection programmes—results and experiences. – ICES Journal of Marine Science, 68: 1778–1784. The Irish Sea Data Enhancement Pilot (ISDEP) was initiated by the UK and Irish fishing sectors, with the objective of improving the precision of commercial catch data (landings and discards) from vessels engaged in demersal trawling in the Irish Sea (ICES Division VIIa). The programme was supported by the Irish and UK Governments and managed by national laboratories. The experience of establishing and managing such a programme, including logistical, data-quality, and participation issues, is discussed. By contrasting with parallel national programmes, it is shown that the new data are robust and have improved precision. Experience has also shown that it is preferable to involve a few vessels in providing frequent samples, but that positive incentives are needed to maintain the participation.
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    Topics: Biology , Geosciences , Physics
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  • 95
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    Probability-based surveying using self-sampling to estimate catch and effort in Norway's coastal tourist fishery (2011)
    Oxford University Press
    Details
    Publication Date: 2011-11-24
    Description: Vølstad, J. H., Korsbrekke, K., Nedreaas, K. H., Nilsen, M., Nilsson, G. N., Pennington, M., Subbey, S., and Wienerroither, R. 2011. Probability-based surveying using self-sampling to estimate catch and effort in Norway's coastal tourist fishery. – ICES Journal of Marine Science, 68: 1785–1791. Recreational fishing as a tourist activity has become an increasingly important part of the Norwegian travel industry and may contribute significantly to the fishing mortality on Norwegian coastal cod ( Gadus morhua ). Quantifying catches in the tourist fishery is made difficult by Norway's intricate and long coastline, and the lack of a fishing licence system, a registry of businesses catering for fishing tourists, and a registry of charter boats. A probability-based survey was used to estimate annual catch and effort by boat for anglers associated with 445 tourist-fishing businesses during 2009. From a stratified random sample of businesses, fishing tourists were recruited systematically over time to record their daily catch and effort in diaries. Cod dominated the reported landed catch (harvest) north of 62°N, and saithe and mackerel dominated south of 62°N. The estimated total landed catch of all species taken by tourist fishers in the business sector during 2009 was 3335 t (relative standard error, RSE = 17%), of which 1613 t (RSE = 22%) were cod. It is concluded that surveys based on self-sampling can yield accurate estimates of catch and effort accounted for by the business sector of the Norwegian tourist fishery and that the tourist catch of coastal cod is insignificant compared with the commercial and recreational catch by local residents.
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  • 96
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    Observations of discards in the Scottish mixed demersal trawl fishery (2011)
    Oxford University Press
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    Publication Date: 2011-11-24
    Description: Fernandes, P. G., Coull, K., Davis, C., Clark, P., Catarino, R., Bailey, N., Fryer, R., and Pout, A. 2011. Observations of discards in the Scottish mixed demersal trawl fishery. – ICES Journal of Marine Science, 68: 1734–1742. The Marine Laboratory in Aberdeen (now part of Marine Scotland Science) has operated a scientific observer programme in the Scottish mixed demersal trawl fishery for more than 20 years. Discards of the main demersal species (cod, haddock, whiting, and saithe) have been sampled according to a stratified design based on gear, area, and month, with quota sampling used to select vessels. The aim of the programme is to estimate the quantity (at age) of the discarded component of the catch, to contribute to estimates of total catch for these species so that assessments of each stock can be made. Trends of discards from this observer programme from 1987 to 2009 are reported. Notable features include the sudden practice of discarding marketable cod in 2007. This was due to a number of factors including, paradoxically, improvements in compliance measures which meant that fish could no longer be landed illegally. Methods for raising the sampled discards to the level of the fleet are also explored and discussed in relation to changes in discarding patterns. These are particularly relevant at a time when, in northern Europe at least, there is a move towards standardizing methods for estimating total quantities of discards.
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  • 97
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    Climatic variability in the Skagerrak and coastal waters of Norway (2011)
    Oxford University Press
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    Publication Date: 2011-12-18
    Description: Albretsen, J., Aure, J., Sætre, R., and Danielssen, D. S. 2012. Climatic variability in the Skagerrak and coastal waters of Norway. – ICES Journal of Marine Science, 69: 758–763. The Institute of Marine Research in Norway collects marine data from all national waters. Data are primarily collected from vessels, but observation buoys, manual measurements, and oceanographic gliders are also used. The most valuable long-term data for elucidating decadal hydrographic variability in the Skagerrak and along the Norwegian coast are the time-series from the transect between Norway and Denmark, and observations carried out at eight fixed coastal stations in the region. The time-series date back to the 1950s and the 1930s, respectively, and the observation frequencies range from approximately once a month to 3–4 times per month. The hydrographic data and their long-term fluctuations have been used in several studies, with particular emphasis on the increased salinity and temperature of the 1990s. Trends during the past decade, however, indicate that warming has continued but that a salinity increase is less evident, implying signs of regional warming in parallel with the global warming observed both on land and in the sea. The overall temperature increase off the Norwegian coast at deeper layers from the 1961–1990 period to the 2000–2009 decade is ∼0.8°C, but some of this can be related to natural variability in the North Atlantic circulation pattern.
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  • 98
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    Decadal-scale changes in southern California sciaenids under different levels of harvesting pressure (2011)
    Oxford University Press
    Details
    Publication Date: 2011-11-01
    Description: Miller, E. F., Pondella II, D. J., Beck, D. S., and Herbinson, K. T. 2011. Decadal-scale changes in southern California sciaenids under different levels of harvesting pressure. – ICES Journal of Marine Science, 68: 2123–2133. A unique 38-year time-series of power-plant entrapment data collected across ∼170 km of the southern California coastline was examined to describe the decadal-scale trends in common Southern California Bight sciaenid abundance in relation to oceanographic conditions. Adult catches for five of seven species declined at differing rates and severity. Declines of up to 94% were detected in historically common species such as Genyonemus lineatus, whereas historically less abundant species have increased dramatically, e.g. Umbrina roncador (2626%). Over time, the entrapped community became increasingly influenced by species with more southerly distributions, indicated by a significant decline in the average latitudinal midpoint of the community. This shift was significantly related to rising ocean temperature and took place in the early to mid-1980s. The observed species-specific abundance changes in all species except Atractoscion nobilis were significantly correlated with sea surface temperature, nearshore plankton volumetric biomass, G. lineatus or Seriphus politus nearshore larval density, or a combination of these. Patterns in A. nobilis abundance were the most isolated, likely reflecting its standing as an intensively fished species, unlike the other six species evaluated. The consistent relationship with environmental indices strongly supported the notion of a faunal shift driven by bottom-up forcing.
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  • 99
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    Age verification of boarfish (Capros aper) in the Northeast Atlantic (2011)
    Oxford University Press
    Details
    Publication Date: 2011-11-01
    Description: Hüssy, K., Coad, J. O., Farrell, E. D., Clausen, L. A. W., and Clarke, M. W. 2012. Age verification of boarfish (Capros aper) in the Northeast Atlantic. – ICES Journal of Marine Science, 69: 34–40. The boarfish (Capros aper) is a pelagic species of recent interest to the fishing industry, with landings increasing by 〉500% over the past 3 years. The objective of the study was to provide a method for age determination based on whole sagittal otoliths, with the results to be used in stock assessment. Translucent zones laid down at regular intervals are identified by marginal increment analysis as seasonally recurring. Translucent zones are formed between September/October and March/April, regardless of fish age. The occurrence of the first annulus is validated by analysis of presumed daily growth increments. Subsequent annulus deposition is homogenous between individuals and allows general guidelines to be derived for interpreting the age of boarfish using their otoliths.
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  • 100
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    Escapement of silver-phase European eels, Anguilla anguilla, determined from fishing activities in a Mediterranean lagoon (Or, France) (2011)
    Oxford University Press
    Details
    Publication Date: 2011-11-09
    Description: Charrier, F., Mazel, V., Caraguel, J-M., Abdallah, Y., Le Gurun, L. L., Legault, A., and Laffaille, P. 2012. Escapement of silver-phase European eels, Anguilla anguilla, determined from fishing activities in a Mediterranean lagoon (Or, France). – ICES Journal of Marine Science, 69: 30–33. Escapement of silver eels from a Mediterranean lagoon was estimated by a capture–tagging–recapture and automated tag-reading study. The population of silver-phase eels in the lagoon was estimated to be 13.2 kg ha−1, with an escapement rate from the commercial fishery of 76.8%.
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    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press on behalf of International Council for the Exploration of the Sea.
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