ALBERT

Description: The Paris Conference of Parties (COP21) agreement renewed momentum for action against climate change, creating the space for solutions for conservation of the ocean addressing two of its largest threats: climate change and ocean acidification (CCOA). Recent arguments that ocean policies disregard a mature conservation research field, and that protected areas cannot address climate change may be over-simplistic at this time when dynamic solutions for the management of changing oceans are needed. We propose a novel approach, based on spatial meta-analysis of climate impact models, to improve the positioning of marine protected areas to limit CCOA impacts. We do this by estimating the vulnerability of ocean ecosystems to CCOA in a spatially-explicit manner, and then co-mapping human activities such as the placement of renewable energy developments and the distribution of marine protected areas. We test this approach in the NE Atlantic considering also how CCOA impacts the base of the food web which supports protected species, an aspect often neglected in conservation studies. We found that, in this case, current regional conservation plans protect areas with low ecosystem-level vulnerability to CCOA, but disregard how species may re-distribute to new, suitable and productive habitats. Under current plans, these areas remain open to commercial extraction and other uses. Here, and worldwide, ocean conservation strategies under CCOA must recognize the long-term importance of these habitat refuges, and studies such as this one are needed to identify them. Protecting these areas creates adaptive, climate-ready and ecosystem-level policy options for conservation, suitable for changing oceans. This article is protected by copyright. All rights reserved.

Description: Understanding the extent to which phylogenetic constraints and adaptive evolutionary forces help define the physiological sensitivity of species is critical for anticipating climate-related impacts in aquatic environments. Yet, whether upper thermal tolerance and plasticity are shaped by common evolutionary and environmental mechanisms remains to be tested. Based on a systematic literature review, we investigated this question in 82 freshwater fish species (27 families) representing 829 experiments for which data existed on upper thermal limits and it was possible to estimate plasticity using upper thermal tolerance reaction norms. Our findings indicated that there are strong phylogenetic signals in both thermal tolerances and acclimation capacity, although it is weaker in the latter. We found that upper thermal tolerances are correlated with the temperatures experienced by species across their range, likely because of spatially autocorrelated processes in which closely related species share similar selection pressures and limited dispersal from ancestral environments. No association with species thermal habitat was found for acclimation capacity. Instead, species with the lowest physiological plasticity also displayed the highest thermal tolerances, reflecting to some extent an evolutionary trade-off between these two traits. Although our study demonstrates that macroecological climatic niche features measured from species distributions are likely to provide a good approximation of freshwater fish sensitivity to climate change, disentangling the mechanisms underlying both acute and chronic heat tolerances may help to refine predictions regarding climate change-related range shifts and extinctions. This article is protected by copyright. All rights reserved.

Description: The earth is in the midst of a biodiversity crisis, and projections indicate continuing and accelerating rates of global changes. Future alterations in communities and ecosystems may be precipitated by changes in the abundance of strongly interacting species, whose disappearance can lead to profound changes in abundance of other species, including an increase in extinction rate for some. Nearshore coastal communities are often dependent on the habitat and food resources provided by foundational plant (e.g., kelp) and animal (e.g., shellfish) species. We quantified changes in the abundance of the blue mussel ( Mytilus edulis ), a foundation species known to influence diversity and productivity of intertidal habitats, over the past 40 years in the Gulf of Maine, USA, one of the fastest warming regions in the global ocean. Using consistent survey methods, we compared contemporary population sizes to historical data from sites spanning 〉400 km. The results of these comparisons showed that blue mussels have declined in the Gulf of Maine by 〉60% (range: 29-100%) at the site level since the earliest benchmarks in the 1970s. At the same time as mussels declined, community composition shifted: at the 4 sites with historical community data, the sessile community became increasingly algal-dominated. Contemporary (2013-14) surveys across 20 sites showed that sessile species richness was positively correlated to mussel abundance in mid to high intertidal zones. These results suggest that declines in a critical foundation species may have already impacted the intertidal community. To inform future conservation efforts, we provide a database of historical and contemporary baselines of mussel population abundance and dynamics in the Gulf of Maine. Our results underscore the importance of anticipating not only changes in diversity but also changes in the abundance and identity of component species, as strong interactors like foundation species have the potential to drive cascading community shifts. This article is protected by copyright. All rights reserved.

Description: The ongoing climate change is expected to modify the atmospheric carbon (C) sink function of peatlands, which store about 450 Gt of carbon accumulated over centuries and millennia (Fenner and Freeman, 2011). Indeed, the simultaneous rise of temperature and decrease of water level favors soil oxygenation, organic matter (OM) decomposition and in turn, the release of large amounts of CO 2 into the atmosphere. Recently, Bragazza et al. (2016) suggested that climate extreme events reduce carbon accumulation in peatlands by up to 30% owing to the decline of Sphagnum productivity and the rise of microbial decomposition of OM. However, investigating the impact of climate extreme events on OM decomposition requires that indirect effects, such as vegetation changes and water physicochemical properties, did not falsify interpretation of the changes in the microbial activities (Delarue et al., 2014; Delarue et al., 2015). This article is protected by copyright. All rights reserved.

Description: Although the impacts of nutrient pollution on coral reefs are well known, surprisingly, no statistical relationships have ever been established between water quality parameters, coral biodiversity and coral cover. Hong Kong provides a unique opportunity to assess this relationship. Here, coastal waters have been monitored monthly since 1986, at 76 stations, providing a highly spatially resolved water quality dataset including 68,903 data points. Moreover, a robust coral species richness ( S ) dataset is available from more than 100 surveyed locations, composed of 3,453 individual colonies’ observations, as well as a coral cover ( CC ) dataset including 85 sites. This wealth of data provides a unique opportunity to test the hypothesis that water quality, and in particular nutrients, drives coral biodiversity. The influence of water quality on S and CC was analyzed using GIS and multiple regression modeling. Eutrophication (as chlorophyll-a concentration; CHLA) was negatively correlated with S and CC , whereas physico-chemical parameters (DO and salinity) had no significant effect. The modeling further illustrated that PSM, DIN and DIP had a negative effect on S and on CC , however, the effect of nutrients was 1.5 to 2-fold greater. The highest S and CC occurred where CHLA 〈 2 μ g.L −1 , DIN 〈 2 μ M and DIP 〈 0.1 μ M. Where these values were exceeded, S and CC were significantly lower and no live corals were observed where CHLA 〉 15 μ g.L −1 , DIN 〉 9 μ M and DIP 〉 0.33 μ M. This study demonstrates the importance of nutrients over other water quality parameters in coral biodiversity loss and highlights the key role of eutrophication in shaping coral reef ecosystems. This work also provides ecological thresholds that may be useful for water quality guidelines and nutrient-mitigation policies. This article is protected by copyright. All rights reserved.

Description: Arctic ecosystems are characterized by a wide range of soil moisture conditions and thermal regimes and contribute differently to the net methane (CH 4 ) budget. Yet, it is unclear how climate change will affect the capacity of those systems to act as a net source or sink of CH 4 . Here, we present results of in situ CH 4 flux measurements made during the growing season 2014 on Disko Island (west Greenland) and quantify the contribution of contrasting soil and landscape types to the net CH 4 budget and responses to summer warming. We compared gas flux measurements from a bare soil and a dry heath, at ambient conditions and increased air temperature, using open-top chambers (OTCs). Throughout the growing season, bare soil consumed 0.22 ± 0.03 g CH 4 -C m −2 (8.1 ± 1.2 g CO 2 -eq m −2 ) at ambient conditions, while the dry heath consumed 0.10 ± 0.02 g CH 4 -C m −2 (3.9 ± 0.6 g CO 2 -eq m −2 ). These uptake rates were subsequently scaled to the entire study area of 0.15 km 2 , a landscape also consisting of wetlands with a seasonally integrated methane release of 0.10 ± 0.01 g CH 4 -C m −2 (3.7 ± 1.2 g CO 2 -eq m −2 ). The result was a net landscape sink of 12.71 kg CH 4 -C (0.48 tonne CO 2 -eq) during the growing season. A nonsignificant trend was noticed in seasonal CH 4 uptake rates with experimental warming, corresponding to a 2% reduction at the bare soil, and 33% increase at the dry heath. This was due to the indirect effect of OTCs on soil moisture, which exerted the main control on CH 4 fluxes. Overall, the net landscape sink of CH 4 tended to increase by 20% with OTCs. Bare and dry tundra ecosystems should be considered in the net CH 4 budget of the Arctic due to their potential role in counterbalancing CH 4 emissions from wetlands – not the least when taking the future climatic scenarios of the Arctic into account.

Description: Understandings of contemporary forest cover loss are critical for policy but have come at the expense of long-term, multi-directional analyses of land cover change. This is a critical gap given (i) profound reconfigurations in land use and land control over the past several decades and (ii) evidence of widespread “woodland resurgence” throughout the tropics. In this paper, we argue that recent advancements within the field of land change science provide new opportunities to address this gap. In turn, we suggest that multi-decadal and multi-directional analyses of land cover change can facilitate richer social analyses of land cover change and more relevant conservation policies and practice. Our argument is grounded in a case study from Southeast Sulawesi, Indonesia. Using a novel analytical platform, Google Earth Engine, and open access to high-quality Landsat data, we map land cover change in Southeast Sulawesi, Indonesia from 1972-2014. We find that tree cover loss constitutes the single largest net change over the period 1972-2014 but that gross rates of tree cover gain were three times higher than gross loss rates from 1972-1995 and equivalent to loss rates from 1995-2014. We suggest the smallholder tree crop economy likely produced both forest loss and Imperata grassland restoration in this region. This case points to the need to expand rather than collapse the baselines used to study carbon and biodiversity change in tropical regions. It also demonstrates the possible utility of applying such methods to other regions. This article is protected by copyright. All rights reserved.

Description: Shifts in biodiversity and ecological processes in stream ecosystems in response to rapid climate change will depend on how numerically and functionally dominant aquatic insect species respond to changes in stream temperature and hydrology. Across 253 minimally perturbed streams in 8 ecoregions in the western US, we modeled the distribution of 88 individual insect taxa in relation to existing combinations of maximum summer temperature, mean annual streamflow, and their interaction. We used a heat map approach along with downscaled General Circulation Model (GCM) projections of warming and streamflow change to estimate site-specific extirpation likelihood for each taxon, allowing estimation of whole community change in streams across these ecoregions. Conservative climate change projections indicate a 30-40% loss of taxa in warmer, drier ecoregions and 10-20% loss in cooler, wetter ecoregions where taxa are relatively buffered from projected warming and hydrologic change. Differential vulnerability of taxa with key functional foraging roles in processing basal resources suggests that climate change has the potential to modify stream trophic structure and function (e.g., alter rates of detrital decomposition and algal consumption), particularly in warmer and drier ecoregions. We show that streamflow change is equally as important as warming in projected risk to stream community composition and that the relative threat posed by these two fundamental drivers varies across ecoregions according to projected gradients of temperature and hydrologic change. Results also indicate that direct human modification of streams through actions such as water abstraction are likely to further exacerbate loss of taxa and ecosystem alteration, especially in drying climates. Management actions to mitigate climate change impacts on stream ecosystems or to proactively adapt to them will require regional calibration, due to geographic variation in insect sensitivity and in exposure to projected thermal warming and hydrologic change. This article is protected by copyright. All rights reserved.

Description: De Oliveira Silva et al. (2016) model beef production in the Brazilian Cerrado , and conclude that – if accompanied by tight deforestation control – increasing production could lower emissions by incentivising better pasture management. While their analysis is valuable in identifying the conditions under which increasing meat consumption could be compatible with reducing greenhouse gas emissions, we believe that there is little chance of such conditions occurring in practice. Overall, increasing beef consumption and production is unlikely to be an effective lever for reducing emissions, and is more likely to exacerbate deforestation. This article is protected by copyright. All rights reserved.

Description: Land-use change due to anthropogenic development is pervasive across the globe and commonly associated with negative consequences for biodiversity. While land-use change has been linked to shifts in the behavior and habitat-use patterns of wildlife species, little is known about its influence on animal population dynamics, despite the relevance of such information for conservation. We conducted the first broad-scale investigation correlating temporal patterns of land-use change with the demographic rates of mule deer, an iconic species in the western United States experiencing wide-scale population declines. We employed a unique combination of long-term (1980–2010) data on residential and energy development across western Colorado, in conjunction with congruent data on deer recruitment, to quantify annual changes in land-use and correlate those changes with annual indices of demographic performance. We also examined annual variation in weather conditions, which are well recognized to influence ungulate productivity, and provided a basis for comparing the relative strength of different covariates in their association with deer recruitment. Using linear mixed models, we found that increasing residential and energy development within deer habitat were correlated with declining recruitment rates, particularly within seasonal winter ranges. Residential housing had two times the magnitude of effect of any other factor we investigated, and energy development had an effect size similar to key weather variables known to be important to ungulate dynamics. This analysis is the first to correlate a demographic response in mule deer with residential and energy development at large spatial extents relevant to population performance, suggesting that further increases in these development types on deer ranges are not compatible with the goal of maintaining highly productive deer populations. Our results underscore the significance of expanding residential development on mule deer populations, a factor that has received little research attention in recent years, despite its rapidly increasing footprint across the landscape.

Description: The cumulative effects of climate warming on herbivore vital rates and population dynamics are hard to predict, given that the expected effects differ between seasons. In the Arctic, warmer summers enhance plant growth which should lead to heavier and more fertile individuals in the autumn. Conversely, warm spells in winter with rainfall (rain-on-snow) can cause ‘icing’, restricting access to forage, resulting in starvation, lower survival and fecundity. Since body condition is a ‘barometer’ of energy demands relative to energy intake, we explored the causes and consequences of variation in body mass of wild female Svalbard reindeer ( Rangifer tarandus platyrhynchus ) from 1994-2015, a period of marked climate warming. Late winter (April) body mass explained 88% of the between-year variation in population growth rate, because it strongly influenced reproductive loss, and hence subsequent fecundity (92%), as well as survival (94%) and recruitment (93%). Autumn (October) body mass affected ovulation rates but did not affect fecundity. April body mass showed no long-term trend (Coefficient of variation, CV = 8.8%) but was higher following warm autumn (October) weather, reflecting delays in winter onset, but most strongly, and negatively, related to ‘rain-on-snow’ events. October body mass (CV =2.5%) increased over the study due to higher plant productivity in the increasingly warm summers. Density-dependent mass change suggested competition for resources in both winter and summer but was less pronounced in recent years, despite an increasing population size. While continued climate warming is expected to increase the carrying capacity of the high Arctic tundra, it is also likely to cause more frequent icing-events. Our analyses suggest that these contrasting effects may cause larger seasonal fluctuations in body mass and vital rates. Overall our findings provide an important ‘missing’ mechanistic link in the current understanding of the population biology of a keystone species in a rapidly warming Arctic. This article is protected by copyright. All rights reserved.

Description: Tree species are predicted to track future climate by shifting their geographic distributions, but climate-mediated migrations are not apparent in a recent continental-scale analysis. To better understand the mechanisms of a possible migration lag, we analyzed relative recruitment patterns by comparing juvenile and adult tree abundances in climate space. One would expect relative recruitment to be higher in cold and dry climates as a result of tree migration with juveniles located further poleward than adults. Alternatively, relative recruitment could be higher in warm and wet climates as a result of higher tree population turnover with increased temperature and precipitation. Using the USDA Forest Service's Forest Inventory and Analysis data at regional scales, we jointly modeled juvenile and adult abundance distributions for 65 tree species in climate space of the eastern United States. We directly compared the optimal climate conditions for juveniles and adults, identified the climates where each species has high relative recruitment, and synthesized relative recruitment patterns across species. Results suggest that for 77% and 83% of the tree species, juveniles have higher optimal temperature and optimal precipitation, respectively, than adults. Across species, the relative recruitment pattern is dominated by relatively more abundant juveniles than adults in warm and wet climates. These different abundance-climate responses through life history are consistent with faster population turnover and inconsistent with the geographic trend of large-scale tree migration. Taken together, this juvenile-adult analysis suggests that tree species might respond to climate change by having faster turnover as dynamics respond to longer growing seasons and higher temperatures, before there is evidence of poleward migration at biogeographic scales. This article is protected by copyright. All rights reserved.

Description: Climate warming threatens to increase mass coral bleaching events, and several studies have projected the demise of tropical coral reefs this century. However, recent evidence indicates corals may be able to respond to thermal stress though adaptive processes (e.g., genetic adaptation, acclimatization, and symbiont shuffling). How these mechanisms might influence warming induced bleaching is largely unknown. This study compared how different adaptive processes could affect coral bleaching projections. We used the latest bias-corrected global sea surface temperature (SST) output from the NOAA/GFDL Earth System Model 2 (ESM2M) for the pre-industrial period though 2100 to project coral bleaching trajectories. Initial results showed that, in the absence of adaptive processes, application of a pre-industrial climatology to the NOAA Coral Reef Watch bleaching prediction method over-predicts the present day bleaching frequency. This suggests that corals may have already responded adaptively to some warming over the industrial period. We then modified the prediction method so that the bleaching threshold either permanently increased in response to thermal history (e.g., simulating directional genetic selection) or temporarily increased for 2-10 years in response to a bleaching event (e.g., simulating symbiont shuffling). A bleaching threshold that changes relative to the preceding 60 years of thermal history reduced the frequency of mass bleaching events by 20-80% compared with the ‘no adaptive response’ prediction model by 2100, depending on the emissions scenario. When both types of adaptive responses were applied, up to 14% more reef cells avoided high frequency bleaching by 2100. However, temporary increases in bleaching thresholds alone only delayed the occurrence of high frequency bleaching by ~10 years in all but the lowest emissions scenario. Future research should test the rate and limit of different adaptive responses for coral species across latitudes and ocean basins to determine if and how much corals can respond to increasing thermal stress. This article is protected by copyright. All rights reserved.

Description: The snow-masking effect of vegetation exerts strong control on albedo in northern high latitude ecosystems. Large-scale changes in the distribution and stature of vegetation in this region will thus have important feedbacks to climate. The snow-albedo feedback is controlled largely by the contrast between snow-covered and snow-free albedo (Δα), which influences predictions of future warming in coupled climate models, despite being poorly constrained at seasonal and century time scales. Here we compare satellite observations and coupled climate model representations of albedo and tree cover for the boreal and Arctic region. Our analyses reveal consistent declines in albedo with increasing tree cover, occurring south of latitudinal tree line, that are poorly represented in coupled climate models. Observed relationships between albedo and tree cover differ substantially between snow-covered and snow-free periods, and among plant functional type (PFT). Tree cover in models varies widely but surprisingly does not correlate well with model albedo. Further, our results demonstrate a relationship between tree cover and snow-albedo feedback that may be used to accurately constrain high latitude albedo feedbacks in coupled climate models under current and future vegetation distributions. This article is protected by copyright. All rights reserved.

Description: Because of global land surface warming, extreme temperature events are expected to occur more often and more intensely, affecting the growth and development of the major cereal crops in several ways, thus affecting the production component of food security. In this paper, we have identified rice and maize crop responses to temperature in different, but consistent, phenological phases and development stages. A literature review and data compilation of around 140 scientific articles have determined the key temperature thresholds and response to extreme temperature effects for rice and maize, complementing an earlier study on wheat. Lethal temperatures and cardinal temperatures, together with error estimates, have been identified for phenological phases and development stages. Following the methodology of previous work, we have collected and statistically analysed temperature thresholds of the three crops for the key physiological processes such as leaf initiation, shoot growth and root growth and for the most susceptible phenological phases such as sowing to emergence, anthesis and grain filling. Our summary shows that cardinal temperatures are conservative between studies and are seemingly well-defined in all three crops. Anthesis and ripening are the most sensitive temperature stages in rice as well as in wheat and maize. We call for further experimental studies of the effects of transgressing threshold temperatures so such responses can be included into crop impact and adaptation models. This article is protected by copyright. All rights reserved.

Description: Will warming lead to an increased use of older soil organic carbon (SOC) by microbial communities, thereby inducing C losses from C-rich alpine soils? We studied soil microbial community composition, activity and substrate use after three and four years of soil warming (+4°C, 2007-2010) at the alpine treeline in Switzerland. The warming experiment was nested in a free air CO 2 enrichment experiment using depleted 13 CO 2 (δ 13 C = –30‰, 2001-2009). We traced this depleted 13 C label in phospholipid fatty acids (PLFA) of the organic layer (0-5 cm soil depth) and in C mineralized from root-free soils to distinguish substrate ages used by soil microorganisms: fixed before 2001 (“old”), from 2001 to 2009 (“new”) or in 2010 (“recent”). Warming induced a sustained stimulation of soil respiration (+38%) without decline in mineralizable SOC. PLFA concentrations did not reveal changes in microbial community composition due to soil warming, but soil microbial metabolic activity was stimulated (+66%). Warming decreased the amount of new and recent C in the fungal biomarker 18:2ω6,9 and the amount of new C mineralized from root-free soils, implying a shift in microbial substrate use towards a greater use of old SOC. This shift in substrate use could indicate an imbalance between C inputs and outputs, which could eventually decrease SOC storage in this alpine ecosystem. This article is protected by copyright. All rights reserved.

Description: Circumpolar expansion of tall shrubs and trees into Arctic tundra is widely thought to be occurring as a result of recent climate warming, but little quantitative evidence exists for northern Siberia, which encompasses the world's largest forest-tundra ecotonal belt. We quantified changes in tall shrub and tree canopy cover in eleven, widely-distributed Siberian ecotonal landscapes by comparing very-high-resolution photography from the Cold War-era “Gambit” and “Corona” satellite surveillance systems (1965-1969) with modern imagery. We also analyzed within-landscape patterns of vegetation change to evaluate the susceptibility of different landscape components to tall shrub and tree increase. The total cover of tall shrubs and trees increased in nine of eleven ecotones. In northwest Siberia, alder ( Alnus ) shrubland cover increased 5.3 – 25.9% in five ecotones. In Taymyr and Yakutia, larch ( Larix ) cover increased 3.0 – 6.7% within three ecotones, but declined 16.8% at a fourth ecotone due to thaw of ice-rich permafrost. In Chukotka, the total cover of alder and dwarf pine ( Pinus ) increased 6.1% within one ecotone and was little-changed at a second ecotone. Within most landscapes, shrub and tree increase was linked to specific geomorphic settings, especially those with active disturbance regimes such as permafrost patterned-ground, floodplains, and colluvial hillslopes. Mean summer temperatures increased at most ecotones since the mid-1960s, but rates of shrub and tree canopy cover expansion were not strongly correlated with temperature trends and were better correlated with mean annual precipitation. We conclude that shrub and tree cover is increasing in tundra ecotones across most of northern Siberia, but rates of increase vary widely regionally and at the landscape-scale. Our results indicate that extensive changes can occur within decades in moist, shrub-dominated ecotones, as in northwest Siberia, while changes are likely to occur much more slowly in the highly continental, larch-dominated ecotones of central and eastern Siberia. This article is protected by copyright. All rights reserved.

Description: The adaptation of different species to warming temperatures has been increasingly studied. Moose ( Alces alces ) is the largest of the ungulate species occupying the northern latitudes across the globe, and in Finland it is the most important game species. It is very well adapted to severe cold temperatures, but has a relatively low tolerance to warm temperatures. Previous studies have documented changes in habitat use by moose due to high temperatures. In many of these studies the used areas have been classified according to how much thermal cover they were assumed to offer based on satellite/aerial imagery data. Here, we identified the vegetation structure in the areas used by moose under different thermal conditions. For this purpose we used airborne laser scanning (ALS) data extracted from the locations of GPS-collared moose. This provided us with detailed information about the relationships between moose and the structure of forests it uses in different thermal conditions and we were therefore able to determine and differentiate between the canopy structures at locations occupied by moose during different thermal conditions. We also discovered a threshold beyond which moose behaviour began to change significantly: as day temperatures began to reach 20 ○ C and higher, the search for areas with higher and denser canopies during daytime became evident. The difference was clear when compared to habitat use at lower temperatures, and was so strong that it provides supporting evidence to previous studies, suggesting that moose are able to modify their behaviour to cope with high temperatures, but also that the species is likely to be affected by warming climate. This article is protected by copyright. All rights reserved.

Description: Mountain ecosystems are particularly susceptible to climate change. Characterizing intraspecific variation of alpine plants along elevational gradients is crucial for estimating their vulnerability to predicted changes. Environmental conditions vary with elevation, which might influence plastic responses and affect selection pressures that lead to local adaptation. Thus, local adaptation and phenotypic plasticity among low and high elevation plant populations in response to climate, soil and other factors associated with elevational gradients might underlie different responses of these populations to climate warming. Using a transplant experiment along an elevational gradient, we investigated reproductive phenology, growth and reproduction of the nutrient-poor grassland species Ranunculus bulbosus , Trifolium montanum , and Briza media . Seeds were collected from low and high elevation source populations across the Swiss Alps and grown in nine common gardens at three different elevations with two different soil depths. Despite genetic differentiation in some traits, the results revealed no indication of local adaptation to the elevation of population origin. Reproductive phenology was advanced at lower elevation in low and high elevation populations of all three species. Growth and reproduction of T. montanum and B. media were rarely affected by garden elevation and soil depth. In R. bulbosus , however, growth decreased and reproductive investment increased at higher elevation. Furthermore, soil depth influenced growth and reproduction of low elevation R. bulbosus populations. We found no evidence for local adaptation to elevation of origin and hardly any differences in the responses of low and high elevation populations. However, the consistent advanced reproductive phenology observed in all three species shows that they have the potential to plastically respond to environmental variation. We conclude that populations might not be forced to migrate to higher elevations as a consequence of climate warming, as plasticity will buffer the detrimental effects of climate change in the three investigated nutrient-poor grassland species. This article is protected by copyright. All rights reserved.

Description: The impact of climate change on the stability of soil organic carbon (SOC) remains a major source of uncertainty in predicting future changes in atmospheric CO 2 levels. One unsettled issue is whether the mineralization response to temperature depends on SOC mineralization rate. Long-term (〉25 years) bare fallow experiments (LTBF) in which the soil is kept free of any vegetation and organic inputs, and their associated archives of soil samples represent a unique research platform to examine this issue as with increasing duration of fallow, the lability of remaining total SOC decreases. We retrieved soils from LTBF experiments situated at Askov (Denmark), Grignon (France), Ultuna (Sweden) and Versailles (France) and sampled at the start of the experiments and after 25, 50, 52, and 79 years of bare fallow, respectively. Soils were incubated at 4, 12, 20 and 35 °C and the evolved CO 2 monitored. The apparent activation energy ( Ea ) of SOC was then calculated for similar loss of CO 2 at the different temperatures. The Ea was always higher for samples taken at the end of the bare-fallow period, implying a higher temperature sensitivity of stable C than of labile C. Our results provide strong evidence for a general relationship between temperature sensitivity and SOC stability upon which significant improvements in predictive models could be based. This article is protected by copyright. All rights reserved.

Description: The temperature dependence of aerobic scope has been suggested to be a major determinant of how marine animals will cope with future rises in environmental temperature. Here we present data suggesting that in some animals, the temperature dependence of anaerobic scope (i.e. the capacity for surviving severe hypoxia) may determine present-day latitudinal distributions and potential for persistence in a warmer future. As a model for investigating the role of anaerobic scope, we studied two sibling species of coral-dwelling gobies, Gobiodon histrio and G. erythrospilus , with different latitudinal distributions, but which overlap in equal abundance at Lizard Island (14°40'S) on the Great Barrier Reef. These species did not differ in the temperature dependence of resting oxygen consumption or critical oxygen concentration (the lowest oxygen level where resting oxygen consumption can be maintained). By contrast, the more equatorial species ( G. histrio ) had a better capacity to endure anaerobic conditions at oxygen levels below the critical oxygen concentration at the high temperatures (32 – 33 °C) more likely to occur near the equator, or in a warmer future. These results suggest that anaerobic scope, in addition to aerobic scope, could be important in determining the impacts of global warming on some marine animals. This article is protected by copyright. All rights reserved.

Description: Most North American forests are at some stage of post-disturbance regrowth, subject to a changing climate, and exhibit growth and mortality patterns that may not be closely coupled to annual environmental conditions. Distinguishing the possibly interacting effects of these processes is necessary to put short-term studies in a longer-term context, and particularly important for the carbon-dense, fire-prone boreal forest. The goals of this study were to combine dendrochronological sampling, inventory records, and machine-learning algorithms to understand how tree growth and death have changed at one highly studied site (Northern Old Black Spruce, NOBS) in the central Canadian boreal forest. Over the 1999-2012 inventory period, mean tree diameter increased even as stand density and basal area declined significantly. Tree mortality averaged 1.4±0.6% yr −1 , with most mortality occurring in medium-sized trees; new recruitment was minimal. There have been at least two, and probably three, significant influxes of new trees since stand initiation, but none in recent decades. A combined tree ring chronology constructed from sampling in 2001, 2004, and 2012 showed several periods of extreme growth depression, with increased mortality lagging depressed growth by ~5 years. Higher minimum and maximum air temperatures exerted a negative influence on tree growth, while precipitation and climate moisture index had a positive effect; both current- and previous-year data exerted significant effects. Models based on these variables explained 23-44% of the ring-width variability. We suggest that past climate extremes led to significant mortality still visible in the current forest structure, with decadal dynamics superimposed on slower patterns of fire and succession. These results have significant implications for our understanding of previous work at NOBS, the carbon sequestration capability of old-growth stands in a disturbance-prone landscape, and the sustainable management of regional forests in a changing climate. This article is protected by copyright. All rights reserved.

Description: The 20th century was a pivotal period at high northern latitudes as it marked the onset of a rapid climatic warming brought on by major anthropogenic changes in global atmospheric composition. In parallel, Arctic sea ice extent has been decreasing over the period of available satellite data record. Here we document how these changes influenced vegetation productivity in adjacent eastern boreal North America. To do this, we used normalized difference vegetation index (NDVI) data, model simulations of net primary productivity (NPP), and tree-ring width measurements covering the last 300 years. Climatic and proxy-climatic datasets were used to explore the relationships between vegetation productivity and Arctic sea ice concentration and extent, and temperatures. Results indicate that an unusually large amount of black spruce ( Picea mariana ) trees entered into a period of growth decline during the late 20th century (68% of sampled trees; n = 724 cross-sections of age 〉 70 years). This finding is coherent with evidence encoded in NDVI and simulated NPP data. Analyses of climatic and vegetation productivity relationships indicate that the influence of recent climatic changes in the studied forests has been via the enhanced moisture stress (i.e. greater water demands) and autotrophic respiration amplified by the declining sea ice concentration in the Hudson Bay and Hudson Strait. The recent decline strongly contrasts with other growth reduction events that occurred during the 19 th century, which were associated with cooling and high sea ice severity. The recent decline of vegetation productivity is the first one to occur under circumstances related to excess heat in a 300-year period, and further culminates with an intensifying wildfire regime in the region. Our results concur with observations from other forest ecosystems about intensifying temperature-driven drought stress and tree mortality with ongoing climatic changes. This article is protected by copyright. All rights reserved.

Description: Successful species interactions require that both partners share a similar cue. For many species, spring warming acts as a shared signal to synchronize mutualist behaviors. Spring flowering plants and the ants that disperse their seeds respond to warming temperatures so that ants forage when plants drop seeds. However, where warm-adapted ants replace cold-adapted ants, changes in this timing might leave early seeds stranded without a disperser. We investigate plant seed dispersal south and north of a distinct boundary between warm- and cold-adapted ants to determine if changes in the ant species influence local plant dispersal. The warm-adapted ants forage much later than the cold-adapted ants, and so we first assess natural populations of early and late blooming plants. We then transplant these plants south and north of the ant boundary to test whether distinct ant climate requirements disrupt the ant-plant mutualism. Whereas the early blooming plant's inability to synchronize with the warm-adapted ant leaves its populations clumped and patchy and its seedlings clustered around the parents in natural populations, when transplanted into the range of the cold-adapted ant, effective seed dispersal recovers. In contrast, the mutualism persists for the later blooming plant regardless of location because it sets seed later in spring when both warm- and cold-adapted ant species forage, resulting in effective seed dispersal. These results indicate that the climate response of species interactions, not just the species themselves, is integral in understanding ecological responses to a changing climate. Data linking phenological synchrony and dispersal are rare, and these results suggest a viable mechanism by which a species’ range is limited more by biotic than abiotic interactions – despite the general assumption that biotic influences are buried within larger climate drivers. These results show that biotic partner can be as fundamental a niche requirement as abiotic resources. This article is protected by copyright. All rights reserved.

Description: Increasing ocean temperatures and strengthening boundary currents have caused the poleward migration of many marine species. Cubozoan jellyfish known to cause Irukandji syndrome have historically been confined to tropical waters but may be expanding into sub-tropical regions. Here we examine the interactive effects of warming and acidification on the population dynamics of polyps of an Irukandji jellyfish, Alatina nr mordens, and the formation of statoliths in newly metamorphosed medusae, to determine if this jellyfish could tolerate future conditions predicted for southeast Queensland (SEQ), Australia. Two experiments, examining the orthogonal factors of temperature and pH were undertaken. Experiment 1 mimicked the current, ca. 2050 and ca. 2100 summer temperature and pH conditions predicted for SEQ using A1F1 scenarios (temperature: 25, 27, 29°C; pH: 7.9, 7.8, 7.6) and Experiment 2 mimicked current and future winter conditions (18 and 22°C, pH 7.9, 7.8, 7.6). All polyps in Experiment 1 survived and budded. Fewer polyps budded in the lower pH treatments but patterns varied slightly among temperature treatments. Statoliths at pH 7.6 were 24% narrower than those at pH 7.8 and 7.9. Most polyps survived the winter conditions mimicked by Experiment 2 but only polyps in the 22°C, pH 7.9 treatment increased significantly. The current absence of A . nr mordens medusae in SEQ, despite the polyps’ ability to tolerate the current temperature and pH conditions, suggests that ecological, rather than abiotic factors currently limit their distribution. Observations that budding was lower under low pH treatments suggest that rates of asexual reproduction will likely be much slower in the future. We consider that A . nr mordens polyps are likely to tolerate future conditions but are unlikely to thrive in the long term. However, if polyps can overcome potential ecological boundaries and acidification proceeds slowly A . nr mordens could expand polewards in the short-term. This article is protected by copyright. All rights reserved.

Description: Soil CO 2 efflux ( F soil ) is the largest source of carbon from forests and reflects primary productivity as well as how carbon is allocated within forest ecosystems. Through early stages of stand development, both elevated [CO 2 ] and availability of soil nitrogen (N; sum of mineralization, deposition, and fixation) have been shown to increase gross primary productivity, but the long-term effects of these factors on F soil are less clear. Expanding on previous studies at the Duke Free Air CO 2 Enrichment (FACE) site, we quantified the effects of elevated [CO 2 ] and N fertilization on F soil using daily measurements from automated chambers over 10 years. Consistent with previous results, compared to ambient-unfertilized plots, annual F soil increased under elevated [CO 2 ] (~17%) and decreased with N (~21%). N fertilization under elevated [CO 2 ] reduced F soil to values similar to untreated plots. Over the study period, base respiration rates increased with leaf productivity but declined after productivity saturated. Despite treatment-induced differences in aboveground biomass, soil temperature and water content were similar among treatments. Inter-annually, low soil water content decreased annual F soil from potential values – estimated based on temperature alone assuming non-limiting soil water content – by ~0.7% per 1.0% reduction in relative extractable water. This effect was only slightly ameliorated by elevated [CO 2 ]. Variability of soil N availability among plots accounted for the spatial variability of F soil , showing a decrease of ~114 g C m -2 y -1 per 1 g m -2 increase in soil N availability, with consistently higher F soil in elevated [CO 2 ] plots ~127 g C per 100 ppm [CO 2 ] over the +200 ppm enrichment. Altogether, reflecting increased belowground carbon partitioning in response to greater plant nutritional needs, the effects of elevated [CO 2 ] and N fertilization on F soil in this stand are sustained beyond the early stages of stand development and through stabilization of annual foliage production. This article is protected by copyright. All rights reserved.

Description: To meet growing global food demand with limited land and reduced environmental impact, agricultural greenhouse gas (GHG) emissions are increasingly evaluated with respect to crop productivity, i.e. on a yield-scaled as opposed to area basis. Here, we compiled available field data on CH 4 and N 2 O emissions from rice production systems to test the hypothesis that in response to fertilizer nitrogen (N) addition, yield-scaled global warming potential (GWP) will be minimized at N rates that maximize yields. Within each study, yield N surplus was calculated to estimate deficit or excess N application rates with respect to the optimal N rate (defined as the N rate at which maximum yield was achieved). Relationships between yield N surplus and GHG emissions were assessed using linear and nonlinear mixed-effects models. Results indicate that yields increased moving from deficit to optimal N rates. At N rates contributing to a yield N surplus, N 2 O and yield-scaled N 2 O emissions increased exponentially. In contrast, CH 4 emissions were not impacted by N inputs. Accordingly, yield-scaled CH 4 emissions decreased with N addition. Overall, yield-scaled GWP was minimized at optimal N rates, decreasing by 21% compared to treatments without N addition. These results are unique compared to aerobic cropping systems in which N 2 O emissions are the primary contributor to GWP, meaning yield-scaled GWP may not necessarily decrease for aerobic crops when yields are optimized by N fertilizer additions. Balancing gains in agricultural productivity with climate change concerns, this work supports the concept that high rice yields can be achieved with minimal yield-scaled GWP through optimal N application rates. Moreover, additional improvements in N use efficiency may further reduce yield-scaled GWP, thereby strengthening the economic and environmental sustainability of rice systems. This article is protected by copyright. All rights reserved.

Description: Climate change is projected to push the limits of cropping systems and has the potential to disrupt the agricultural sector from local to global scales. This article introduces the Coordinated Climate-Crop Modeling Project (C3MP), an initiative of the Agricultural Model Intercomparison and Improvement Project (AgMIP) to engage a global network of crop modelers to explore the impacts of climate change via an investigation of crop responses to changes in carbon dioxide concentration ([CO 2 ]), temperature, and water. As a demonstration of the C3MP protocols and enabled analyses, we apply the Decision Support System for Agrotechnology Transfer (DSSAT) CROPGRO-Peanut crop model for Henry County, Alabama, to evaluate responses to the range of plausible [CO 2 ], temperature changes, and precipitation changes projected by climate models out to the end of the 21 st century. These sensitivity tests are used to derive crop model emulators that estimate changes in mean yield and the coefficient of variation for seasonal yields across a broad range of climate conditions, reproducing mean yields from sensitivity test simulations with deviations of ~2% for rainfed conditions. We apply these statistical emulators to investigate how peanuts respond to projections from various global climate models, time periods, and emissions scenarios, finding a robust projection of modest (〈10%) median yield losses in the middle of the 21 st century accelerating to more severe (〉20%) losses and larger uncertainty at the end of the century under the more severe representative concentration pathway 8.5. This projection is not substantially altered by the selection of the AgMERRA global gridded climate dataset rather than the local historical observations, differences between the Third and Fifth Coupled Model Intercomparison Project (CMIP3 and CMIP5), or the use of the delta method of climate impacts analysis rather than the C3MP impacts response surface and emulator approach. This article is protected by copyright. All rights reserved.

Description: Large-scale, long-term FACE (Free Air CO 2 -enrichment) experiments indicate that increases in atmospheric CO 2 concentrations will influence forest C cycling in unpredictable ways. It has been recently suggested that responses of mycorrhizal fungi could determine whether forest NPP (net primary production) is increased by elevated CO 2 over long time periods and if forests soils will function as sources or sinks of C in the future. We studied the dynamic responses of ectomycorrhizae to N fertilization and atmospheric CO 2 -enrichment at the Duke FACE experiment using minirhizotrons over a six year period (2005-2010). Stimulation of mycorrhizal production by elevated CO 2 was observed during only one (2007) of six years. This increased the standing crop of mycorrhizal tips during 2007 and 2008; during 2008, significantly higher mortality returned standing crop to ambient levels for the remainder of the experiment. It is therefore unlikely that increased production of mycorrhizal tips can explain the lack of progressive nitrogen limitations and associated increases in N uptake observed in CO 2 -enriched plots at this site. Fertilization generally decreased tree reliance on mycorrhizae as tip production declined with the addition of nitrogen as has been shown in many other studies. Annual NPP of mycorrhizal tips was greatest during years with warm January temperatures and during years with cool spring temperatures. A 2° C increase in average late spring temperatures (May and June) decreased annual production of mycorrhizal root tip length by 50%. This has important implications for ecosystem function in a warmer world in addition to potential for forest soils to sequester atmospheric C. This article is protected by copyright. All rights reserved.

Description: Permafrost thaw in the Arctic driven by climate change is mobilizing ancient terrigenous organic carbon (OC) into fluvial networks. Understanding the controls on metabolism of this OC is imperative for assessing its role with respect to climate feedbacks. In this study we examined the effect of inorganic nutrient supply and dissolved organic matter (DOM) composition on aquatic extracellular enzyme activities (EEAs) in waters draining the Kolyma River Basin (Siberia), including permafrost derived OC. Reducing the phenolic content of the DOM pool resulted in dramatic increases in hydrolase EEAs (e.g. phosphatase activity increased 〉 28 fold) supporting the idea that high concentrations of polyphenolic compounds in DOM (e.g. plant structural tissues) inhibit enzyme synthesis or activity, limiting OC degradation. EEAs were significantly more responsive to inorganic nutrient additions only after phenolic inhibition was experimentally removed. In controlled mixtures of modern OC and thawed permafrost endmember OC sources, respiration rates per unit dissolved OC were 1.3 – 1.6 times higher in waters containing ancient carbon, suggesting that permafrost derived OC was more available for microbial mineralization. In addition, waters containing ancient permafrost derived OC supported elevated phosphatase and glucosidase activities. Based on these combined results, we propose that both composition and nutrient availability regulates DOM metabolism in Arctic aquatic ecosystems. Our empirical findings are incorporated into a mechanistic conceptual model highlighting two key enzymatic processes in the mineralization of riverine OM: 1) the role of phenol oxidase activity in reducing inhibitory phenolic compounds; and 2) the role of phosphatase in mobilizing organic P. Permafrost derived DOM degradation was less constrained by this initial “phenolic-OM” inhibition; thus, informing reports of high biological availability of ancient, permafrost derived DOM with clear ramifications for its metabolism in fluvial networks and feedbacks to climate. This article is protected by copyright. All rights reserved.

Description: Ecosystem functioning is simultaneously affected by changes in community composition and environmental change such as increasing atmospheric carbon dioxide (CO 2 ) and subsequent ocean acidification. However, it largely remains uncertain how the effects of these factors compare to each other. Addressing this question, we experimentally tested the hypothesis that initial community composition and elevated CO 2 are equally important to the regulation of phytoplankton biomass. We full-factorially exposed three compositionally different marine phytoplankton communities to two different CO 2 levels and examined the effects and relative importance (ω 2 ) of the two factors and their interaction on phytoplankton biomass at bloom peak. The results showed that initial community composition had a significantly greater impact than elevated CO 2 on phytoplankton biomass, which varied largely among communities. We suggest that the different initial ratios between cyanobacteria, diatoms, and dinoflagellates might be the key for the varying competitive and thus functional outcome among communities. Furthermore, the results showed that depending on initial community composition elevated CO 2 selected for larger sized diatoms, which led to increased total phytoplankton biomass. Our study highlights the relevance of initial community composition, which strongly drives the functional outcome, when assessing impacts of climate change on ecosystem functioning. In particular, the increase in phytoplankton biomass driven by the gain of larger sized diatoms in response to elevated CO 2 potentially has strong implications for nutrient cycling and carbon export in future oceans. This article is protected by copyright. All rights reserved.

Description: Less than half of anthropogenic carbon emissions are accumulating in the atmosphere, due to large net fluxes into both the oceans and the land (Le Queré et al., 2012). The land sink in particular has increased markedly, doubling in strength since the 1960's, to reach 26 petagrams of carbon in the latest decade. However, the location and drivers of this large terrestrial sink are still relatively poorly constrained by atmospheric measurements (Ciais et al. 2013). Pan et al. (2011) recently utilised 〉1 million forest inventory plots to provide summaries of forest carbon stocks, and the first global bottom-up estimates of carbon fluxes for the world's forest biomes for the period 1990-2007. One key result was that almost all the residual global terrestrial carbon sink (i.e. carbon uptake after accounting for land use change), some 2.4 ± 0.4 Pg of carbon per year, is located in the world's established forests (Pan et al., 2011). The sink is distributed worldwide, with globally significant net fluxes into boreal and temperate forests, and a large sink in intact tropical forest, albeit with large uncertainty. Furthermore, Pan et al. (2011) showed that this tropical intact forest sink - may have faded from an estimated annual 1.3 ± 0.4 Pg C in the 1990's to 1.0 ± 0.5 Pg C for 2000-2007. The tropical intact sink is offset by a net land-use emission (1.5 Pg C yr −1 [1990-1999]) declining to 1.1 Pg C yr −1 [2000-2007]), and as a consequence aircraft measurements and inverse modelling studies indicate the tropics to be close to neutral in terms of net carbon fluxes (reviewed by Ciais et al. 2013). While the intact tropical forest sink values represent updates from similar values published previously (e.g., Lewis et al., 2009a), the fact that almost the entire residual terrestrial carbon sink is accounted for by the forests of the world was a notable discovery. Evidence from the ground now points to established forests being a net sink across almost every major forest region, including all extra-tropical forest regions analysed. This article is protected by copyright. All rights reserved.

Description: Forecasting how global warming will affect onset of the growing season is essential for predicting terrestrial productivity, but suffers from conflicting evidence. We show that accurate estimates require ways to connect discrete observations of changing tree status (e.g., pre- vs. post-budbreak) with continuous responses to fluctuating temperatures. By coherently synthesizing discrete observations with continuous responses to temperature variation, we accurately quantify how increasing temperature variation accelerates onset of growth. Application to warming experiments at two latitudes demonstrates that maximum responses to warming are concentrated in late winter, weeks ahead of the main budbreak period. Given that warming will not occur uniformly over the year, knowledge of when temperature variation has the most impact can guide prediction. Responses are large and heterogeneous, yet predictable. The approach has immediate application to forecasting effects of warming on growing season length, requiring only information that is readily available from weather stations and generated in climate models. This article is protected by copyright. All rights reserved.

Description: Climate change is expected to cause geographic redistributions of species. To the extent that species within assemblages have different niche requirements, assemblages may no longer remain intact and dis- and reassemble at current or new geographic locations. We explored how climate change projected by 2100 may transform the world's avian assemblages (characterized at a 110 km spatial grain) by modelling environmental niche-based changes to their dietary guild structure under 0 km, 500 km, and 2000 km dispersal distances. We examined guild structure changes at coarse (primary, high-level, and mixed consumers) and fine (frugivores, nectarivores, insectivores, herbivores, granivores, scavengers, omnivores, and carnivores) ecological resolutions to determine whether or not geographic co-occurrence patterns among guilds were associated with the magnitude to which guilds are functionally resolved. Dietary guilds vary considerably in their global geographic prevalence, and under broad-scale niche-based redistribution of species, these are projected to change very heterogeneously. A non-dispersal assumption results in the smallest projected changes to guild assemblages, but with significant losses for some regions and guilds, such as South American insectivores. Longer dispersal distances are projected to cause greater degrees of disassembly, and lead to greater homogenization of guild composition, especially in northern Asia and Africa. This arises because projected range gains and losses result in geographically heterogeneous patterns of guild compensation. Projected decreases especially of primary and mixed consumers most often are compensated by increases in high-level consumers, with increasing uncertainty about these outcomes as dispersal distance and degree of guild functional resolution increases. Further exploration into the consequences of these significant broad-scale ecological functional changes at the community or ecosystem level should be increasingly on the agenda for conservation science. This article is protected by copyright. All rights reserved.

Description: Climate change scenarios predict increases in the frequency and duration of ENSO-related droughts for parts of South-East Asia until the end of this century exposing the remaining rainforests to increasing drought risk. A pan-tropical review of recorded drought-related tree mortalities in more than 100 monitoring plots before, during and after drought events suggested a higher drought-vulnerability of trees in South-East Asian than in Amazonian forests. Here, we present the results of a replicated (n=3 plots) throughfall exclusion experiment in a perhumid tropical rainforest in Sulawesi, Indonesia. In this first large-scale roof experiment outside semi-humid eastern Amazonia, 60% of the throughfall was displaced during the first 8 months and 80% during the subsequent 17 months, exposing the forest to severe soil desiccation for about 17 months. In the experiment's second year, wood production decreased on average by 40% with largely different responses of the tree families (ranging from -100 to +100% change). Most sensitive were trees with high radial growth rates under moist conditions. In contrast, tree height was only a secondary factor and wood specific gravity had no influence on growth sensitivity. Fine root biomass was reduced by 35% after 25 months of soil desiccation while fine root necromass increased by 250% indicating elevated fine root mortality. Cumulative aboveground litter production was not significantly reduced in this period. The trees from this Indonesian perhumid rainforest revealed similar responses of wood and litter production and root dynamics as those in two semi-humid Amazonian forests subjected to experimental drought. We conclude that trees from paleo- or neotropical forests growing in semi-humid or perhumid climates may not differ systematically in their growth sensitivity and vitality under sub-lethal drought stress. Drought vulnerability may depend more on stem cambial activity in moist periods than on tree height or wood specific gravity. This article is protected by copyright. All rights reserved.

Description: Soil microbial communities in Chihuahuan Desert grasslands generally experience highly variable spatiotemporal rainfall patterns. Changes in precipitation regimes can affect belowground ecosystem processes such as decomposition and nutrient cycling by altering soil microbial community structure and function. The objective of this study was to determine if increased seasonal precipitation frequency and magnitude over a seven-year period would generate a persistent shift in microbial community characteristics and soil nutrient availability. We supplemented natural rainfall with large events (one/winter and three/summer) to simulate increased precipitation based on climate model predictions for this region. We observed a two year delay in microbial responses to supplemental precipitation treatments. In Years 3-5, higher microbial biomass, arbuscular mycorrhizae abundance, and soil enzyme C and P acquisition activities were observed in the supplemental water plots even during extended drought periods. In Years 5-7, available soil P was consistently lower in the watered plots compared to control plots. Shifts in soil P corresponded to higher fungal abundances, microbial C utilization activity, and soil pH. This study demonstrated that 25% shifts in seasonal rainfall can significantly influence soil microbial and nutrient properties, which in turn may have long-term effects on nutrient cycling and plant P uptake in this desert grassland. This article is protected by copyright. All rights reserved.

Description: It is proposed that increases in anthropogenic reactive nitrogen (N r )-deposition may cause temperate and boreal forests to sequester a globally significant quantity of carbon (C); however, long-term data from boreal forests describing how C sequestration responds to realistic levels of chronic N r -deposition are scarce. Using a long term (14-year) stand scale (0.1 ha) N-addition experiment (three levels: 0, 12.5, and 50 kg N ha −1 yr −1 ) in the boreal zone of northern Sweden, we evaluated how chronic N additions altered N uptake and biomass of understory communities, and whether changes in understory communities explained N uptake and C sequestration by trees. We hypothesized that understory communities (i.e. mosses and shrubs) serve as important sinks for low-level N additions, with the strength of these sinks weakening as chronic N addition rates increase, due to shifts in species composition. We further hypothesized that trees would exhibit non-linear increases in N acquisition, and subsequent C sequestration as N addition rates increased, due to a weakening understory N sink. Our data showed that understory biomass was reduced by 50% in response to the high N addition treatment, mainly due to reduced moss biomass. A 15 N labelling experiment showed that feather mosses acquired the largest fraction of applied label, with this fraction decreasing as the chronic N addition level increased. Contrary to our hypothesis, the proportion of label taken up by trees was equal (~8%) across all three N addition treatments. The relationship between N addition and C sequestration in all vegetation pools combined was linear, and had a slope of 16 kg C kg −1 N. While canopy retention of N r deposition may cause C sequestration rates to be slightly different than this estimate, our data suggests that a minor quantity of annual anthropogenic CO 2 emissions are sequestered into boreal forests as a result of N r deposition. This article is protected by copyright. All rights reserved.

Description: Urbanization is one of the most extensive and ecologically significant changes happening to terrestrial environments, as it strongly affects the distribution of biodiversity. It is well established that native species richness is reduced in urban and suburban areas, but the species traits that predict tolerance to urbanization are yet little understood. In birds, one of the most studied groups in this respect, evidence is appearing that acoustic traits influence urban living, but it is unknown how this compares to the effects of more obvious ecological traits that facilitate urban living. Therefore, it remains unclear whether acoustic communication is an important predictor of urban tolerance among species. Here, with a comparative study across 140 European and North American passerines, I show that high song frequency, which is less masked by the low-frequency anthropogenic noise, is associated with urban tolerance, with an effect size over half that of the most important ecological trait studied: off-ground nesting. Other nesting and foraging traits accepted to facilitate urban living did not differ for species occurring in urban environments. Thus, the contribution of acoustic traits for passerine urban tolerance approximates that of more obvious ecological traits. Nonetheless, effect sizes of the biological predictors of urban tolerance were low and the phylogenetic signal for urban tolerance was null, both of which suggest that factors other than phenotypic traits have major effects on urban tolerance. A simple possibility is exposure to urbanization, since there was a higher proportion of urban-tolerant species in Europe, which is more urbanized than North America. This article is protected by copyright. All rights reserved.

Description: There is evidence that climate change induced tree mortalities in boreal and temperate forests and increased forest turnover rates (both mortality and recruitment rates) in Amazon forests. However, no study has examined China's tropical and subtropical evergreen broadleaved forests (TEBF) that cover 〉26% of China's terrestrial land . The sustainability of this biome is vital to the maintenance of local ecosystem services (e.g., carbon sequestration, biodiversity conservation, climatic regulation etc.), many of which may influence patterns of atmospheric circulation and composition at regional to global scales. Here we analyze time-series data collected from thirteen permanent plots within China's unmanaged TEBF to study whether and how this biome has changed over recent decades. We find that the numbers of individuals and species for shrub and small tree have increased since 1978, whereas the numbers of individuals and species for tree have decreased over this same time period. The shift in species composition is accompanied by a decrease in the mean DBH (diameter at breast height) for all individuals combined. China's TEBF may thereby be transitioning from cohorts of fewer and larger individuals to ones of more and smaller individuals, which shows a unique change pattern differing from the documented. Regional-scale drying is likely responsible for the biome's reorganization. This biome-wide reconstitution would deeply impact the regimes of carbon sequestration and biodiversity conservation and have implications for the sustainability of economic development in the area. This article is protected by copyright. All rights reserved.

Description: Freshwater ecosystems provide vital resources for humans and support high levels of biodiversity, yet are severely threatened throughout the world. The expansion of human land uses, such as urban and crop cover, typically degrades water quality and reduces freshwater biodiversity, thereby jeopardizing both biodiversity and ecosystem services. Identifying and mitigating future threats to freshwater ecosystems requires forecasting where land use changes are most likely. Our goal was to evaluate the potential consequences of future land use on freshwater ecosystems in the coterminous United States by comparing alternative scenarios of land use change (2001-2051) with current patterns of freshwater biodiversity and water-quality risk. Using an econometric model, each of our land use scenarios projected greater changes in watersheds of the eastern half of the country, where freshwater ecosystems already experience higher stress from human activities. Future urban expansion emerged as a major threat in regions with high freshwater biodiversity (e.g., the Southeast) or severe water-quality problems (e.g., the Midwest). Our scenarios reflecting environmentally-oriented policies had some positive effects. Subsidizing afforestation for carbon sequestration reduced crop cover and increased natural vegetation in areas that are currently stressed by low water quality, while discouraging urban sprawl diminished urban expansion in areas of high biodiversity. On the other hand, we found that increases in crop commodity prices could lead to increased agricultural threats in areas of high freshwater biodiversity. Our analyses illustrate the potential for policy changes and market factors to influence future land use trends in certain regions of the country, with important consequences for freshwater ecosystems. Successful conservation of aquatic biodiversity and ecosystem services in the U.S. into the future will require attending to the potential threats and opportunities arising from policies and market changes affecting land use. This article is protected by copyright. All rights reserved.

Description: Animals living in tropical regions may be at increased risk from climate change because current temperatures at these locations already approach critical physiological thresholds. Relatively small temperature increases could cause animals to exceed these thresholds more often, resulting in substantial fitness costs or even death. Oviparous species could be especially vulnerable because the maximum thermal tolerances of incubating embryos is often lower than adult counterparts, and in many species mothers abandon the eggs after oviposition, rendering them immobile and thus unable to avoid extreme temperatures. As a consequence, the effects of climate change might become evident earlier and be more devastating for hatchling production in the tropics. Loggerhead sea turtles ( Caretta caretta ) have the widest nesting range of any living reptile, spanning temperate to tropical latitudes in both hemispheres. Currently, loggerhead sea turtle populations in the tropics produce nearly 30% fewer hatchlings per nest than temperate populations. Strong correlations between empirical hatching success and habitat quality allowed global predictions of the spatiotemporal impacts of climate change on this fitness trait. Under climate change, many sea turtle populations nesting in tropical environments are predicted to experience severe reductions in hatchling production, whereas hatching success in many temperate populations could remain unchanged or even increase with rising temperatures. Some populations could show very complex responses to climate change, with higher relative hatchling production as temperatures begin to increase, followed by declines as critical physiological thresholds are exceeded more frequently. Predicting when, where, and how climate change could impact the reproductive output of local populations is crucial for anticipating how a warming world will influence population size, growth, and stability. This article is protected by copyright. All rights reserved.

Description: It has recently been found that the frequency distribution of remotely sensed tree cover in the tropics has three distinct modes, which seem to correspond to forest, savanna and treeless states. This pattern has been suggested to imply that these states represent alternative attractors, and that the response of these systems to climate change would be characterized by critical transitions and hysteresis. Here, we show how this inference is contingent upon mechanisms at play. We present a simple dynamical model that can generate three alternative tree cover states (forest, savanna and a treeless state), based on known mechanisms, and use this model to simulate patterns of tree cover under different scenarios. We use these synthetic data to show that the hysteresis inferred from remotely sensed tree cover patterns will be inflated by spatial heterogeneity of environmental conditions. On the other hand, we show that the hysteresis inferred from satellite data may actually underestimate real hysteresis in response to climate change if there exists a positive feedback between regional tree cover and precipitation. Our results also indicate that such positive feedback between vegetation and climate should cause direct shifts between forest and a treeless state (rather than through an intermediate savanna-state) to become more likely. Lastly, we show how directionality of historical change in conditions may bias the observed relationship between tree cover and environmental conditions. This article is protected by copyright. All rights reserved.

Description: The magnitude and direction of phenological shifts from climate warming could be predictably variable across the planet depending upon the nature of physiological controls on phenology, the thermal sensitivity of the developmental processes and global patterns in the climate warming. We tested this with respect to the flight phenology of adult nocturnal moths (3.33 million captures of 334 species) that were sampled at sites in southern and northern Finland during 1993–2012 (with years 2005–2012 treated as an independent model validation data set). We compared eight competing models of physiological controls on flight phenology to each species and found strong support for thermal controls of phenology in 66% of the species generations. Among species with strong thermal control of phenology in both the south and north, the average development rate was higher in northern vs. southern populations at 10 °C, but about the same at 15 and 20 °C. With a 3 °C increase in temperature (approximating A2 scenario of IPPC for 2090–2099 relative to 1980–1999) these species were predicted to advance their phenology on average by 17 (SE ± 0.3) days in the south vs. 13 (±0.4) days in the north. The higher development rates at low temperatures of poleward populations makes them less sensitive to climate warming, which opposes the tendency for stronger phenological advances in the north from greater increases in temperature.

Description: Desert annuals are a critically important component of desert communities and may be particularly responsive to increasing atmospheric [CO 2 ] because of their high potential growth rates and flexible phenology. During the ten-year life of the Nevada Desert FACE (Free-air CO 2 enrichment) Facility, we evaluated the productivity, reproductive allocation, and community structure of annuals in response to long-term elevated [CO 2 ] exposure. The dominant forb and grass species exhibited accelerated phenology, increased size, and higher reproduction at elevated [CO 2 ] in a wet El Niño year near the beginning of the experiment. However, a multi-year dry cycle resulted in no increases in productivity or reproductive allocation for the remainder of the experiment. At the community level, early indications of increased dominance of the invasive Bromus rubens at elevated [CO 2 ] gave way to an absence of Bromus in the community during a drought cycle, with a resurgence late in the experiment in response to higher rainfall and a corresponding high density of Bromus in a final soil seed bank analysis, particularly at elevated [CO 2 ]. This long-term experiment resulted in two primary conclusions: (1) elevated [CO 2 ] does not increase productivity of annuals in most years; and (2) relative stimulation of invasive grasses will likely depend on future precipitation, with a wetter climate favoring invasive grasses but currently predicted greater aridity favoring native dicots. This article is protected by copyright. All rights reserved.

Description: During the late Miocene, a dramatic global expansion of C 4 plant distribution occurred with broad spatial and temporal variations. Although the event is well documented, whether subsequent expansions were caused by a decreased atmospheric CO 2 concentration or climate change is a contentious issue. In the present study, we used an improved inverse vegetation modeling approach that accounts for the physiological responses of C 3 and C 4 plants to quantitatively reconstruct the paleoclimate in the Siwalik of Nepal based on pollen and carbon isotope data. We also studied the sensitivity of the C 3 and C 4 plants to changes in the climate and the atmospheric CO 2 concentration. We suggest that the expansion of the C 4 plant distribution during the late Miocene may have been primarily triggered by regional aridification and temperature increases. The expansion was unlikely caused by reduced CO 2 levels alone. Our findings suggest that this abrupt ecological shift mainly resulted from climate changes related to the decreased elevation of the Himalayan foreland. This article is protected by copyright. All rights reserved.

Description: Projections of future changes in land carbon (C) storage using biogeochemical models depend on accurately modeling the interactions between the C and nitrogen (N) cycles. Here, we present a framework for analyzing N limitation in global biogeochemical models to explore how C-N interactions of current models compare to field observations, identify the processes causing model divergence, and identify future observation and experiment needs. We used a set of N fertilization simulations from two global biogeochemical models (CLM-CN and O-CN) that use different approaches to modeling C-N interactions. On the global scale, net primary productivity (NPP) in the CLM-CN model was substantially more responsive to N fertilization than in the O-CN model. The most striking difference between the two models occurred for humid tropical forests, where the CLM-CN simulated a 62% increase in NPP at high N addition levels (30 g N m −2 yr −1 ), while the O-CN predicted a 2% decrease in NPP due to N fertilization increasing plant respiration more than photosynthesis. Across 35 temperate and boreal forest sites with field N fertilization experiments, we show that the CLM-CN simulated a 46% increase in aboveground NPP in response to N, which exceeded the observed increase of 25%. In contrast, the O-CN only simulated a 6% increase in aboveground NPP at the N fertilization sites. Despite the small response of NPP to N fertilization, the O-CN model accurately simulated ecosystem retention of N and the fate of added N to vegetation when compared to empirical 15 N tracer application studies. In contrast, the CLM-CN predicted lower total ecosystem N retention and partitioned more losses to volatilization than estimated based from observed N budgets of small catchments. These results point to the need for model improvements for both models to enhance the accuracy with which global C-N cycle feedbacks can be simulated. This article is protected by copyright. All rights reserved.

Description: This study reports the first well-replicated analysis of continuous coral growth records from warmer-water reefs (mean annual SST 〉28.5°C) around the Thai-Malay Peninsula in Southeast Asia. Based on analyses of 70 colonies sampled from 15 reefs within six locations, region-wide declines in coral calcification rate (~18.6%), linear extension rate (~15.4%) and skeletal bulk density (~3.9%) were observed over a 31-year period from 1980–2010. Decreases in calcification and linear extension rates were observed at five of the six locations and ranged from ~17.2-21.6% and ~11.4–19.6% respectively, while decline in skeletal bulk density was a consequence of significant reductions at only two locations (~6.9% and ~10.7%). A significant link between region-wide growth rates and average annual SST was found, and Porites spp. demonstrated a high thermal threshold of ~29.4°C before calcification rates declined. Responses at individual locations within the region were more variable with links between SST and calcification rates being significant at only four locations. Rates of sea temperature warming at locations in the Andaman Sea (Indian Ocean) (~1.3°C decade −1 ) were almost twice those in the South China Sea (Pacific Ocean) (~0.7°C decade −1 ), but this was not reflected in the magnitude of calcification declines at corresponding locations. Considering that massive Porites spp. are major reef-builders around Southeast Asia, this region-wide growth decline is a cause for concern for future reef accretion rates and resilience. However, this study suggests that the future rates and patterns of change within the region are unlikely to be uniform or dependent solely on the rates of change in the thermal environment. This article is protected by copyright. All rights reserved.

Description: Although striking changes have been documented in plant and animal phenology over the past century, less is known about how the fungal kingdom's phenology has been changing. A few recent studies have documented changes in fungal fruiting in Europe in the last few decades, but the geographic and taxonomic extent of these changes, the mechanisms behind these changes, and their relationships to climate, are not well understood. Here, we analyzed herbarium data of 274 species of fungi from Michigan to test the hypotheses that fruiting times of fungi depend on annual climate, and that responses depend on taxonomic and functional groups. We show that the fungal community overall fruits later in warmer and drier years, which has led to a shift toward later fruiting dates for autumn-fruiting species, consistent with existing evidence. However, we also show that these effects are highly variable among species and are partly explained by basic life history characteristics. Resulting differences in climate sensitivities are expected to affect community structure as climate changes. This study provides a unique picture of the climate-dependence of fungal phenology in North America and an approach for quantifying how individual species and broader fungal communities will respond to ongoing climate change. This article is protected by copyright. All rights reserved.

Description: A unique long-term phenological dataset of over 110,000 records of 1st cutting dates for haymaking across Germany, spanning the years 1951-2011 was examined. In addition, we analysed a long-term dataset on the beginning of flowering of meadow foxtail ( Alopecurus pratensis ) covering the last 20 years. We tested whether hay cutting dates (based on a human decision when to cut) showed trends, temperature relationships and spatial distribution similar to the development of this grassland species, and if these trends could be related to climate change. The timing of 1st hay cut was strongly influenced (p 〈 0.001) by altitude, latitude and longitude, revealing in particular an east-west gradient. Over the past 60 years there have been changes in the timing of hay cutting, with the majority of German federal states having significant (p 〈 0.05) advances of approximately 1 day per decade. Overall, the response to mean March- May temperature was highly significant (-2.87 days °C −1 ; p 〈 0.001). However, in the last 20 years no federal state experienced a significant advance and two were even significantly delayed. The temperature response in this post-1991 period became less or non significant for most of the federal states. We suggest that differences in agricultural land use and unequal uptakes of Agri-Environment Schemes (AES, which encourage later cutting) were likely to be responsible for the regional differences, while the general increase in AES appears to have confounded the overall trend in hay cutting in the last 20 years. Trends over time and responses to temperature were small relative to those associated with the phenology of meadow foxtail. The advance in phenology of this species is greater than the advance in hay cutting, implying that hay cutting may not be keeping pace with a changing climate, which may have a positive effect on grassland ecology. This article is protected by copyright. All rights reserved.

Description: The rate of vegetation recovery from boreal wildfire influences terrestrial carbon cycle processes and climate feedbacks by affecting the surface energy budget and land-atmosphere carbon exchange. Previous forest recovery assessments using satellite optical-infrared normalized difference vegetation index (NDVI) and tower CO 2 eddy covariance techniques indicate rapid vegetation recovery within 5 to 10 years, but these techniques are not directly sensitive to changes in vegetation biomass. Alternatively, the vegetation optical depth (VOD) parameter from satellite passive microwave remote sensing can detect changes in canopy biomass structure and may provide a useful metric of post-fire vegetation response to inform regional recovery assessments. We analyzed a multi-year (2003-2010) satellite VOD record from the NASA AMSR-E (Advanced Microwave Scanning Radiometer for EOS) sensor to estimate forest recovery trajectories for 14 large boreal fires from 2004 in Alaska and Canada. The VOD record indicated initial post-fire canopy biomass recovery within 3 to 7 years, lagging NDVI recovery by 1 to 5 years. The VOD lag was attributed to slower non-photosynthetic (woody) and photosynthetic (foliar) canopy biomass recovery, relative to the faster canopy greenness response indicated from the NDVI. The duration of VOD recovery to pre-burn conditions was also directly proportional (p〈0.01) to satellite (MODIS) estimated tree cover loss used as a metric of fire severity. Our results indicate that vegetation biomass recovery from boreal fire disturbance is generally slower than reported from previous assessments based solely on satellite optical-infrared remote sensing, while the VOD parameter enables more comprehensive assessments of boreal forest recovery. This article is protected by copyright. All rights reserved.

Description: Shifts in precipitation regimes are an inherent component of climate change, but in low energy systems are often assumed to be less important than changes in temperature. Because soil moisture is the hydrological variable most proximally linked to plant performance during the growing season in arctic-alpine habitats, it may offer the most useful perspective on the influence of changes in precipitation on vegetation. Here we quantify the influence of soil moisture for multiple vegetation properties at fine spatial scales, to determine the potential importance of soil moisture under changing climatic conditions. A fine-scale dataset, comprising vascular species cover and field-quantified ecologically-relevant environmental parameters, was analysed to determine the influence of soil moisture relative to other key abiotic predictors. Soil moisture was strongly related to community composition, species richness and the occurrence patterns of individual species, having a similar or greater influence than soil temperature, pH and solar radiation. Soil moisture varied considerably over short distances, and this fine-scale heterogeneity may contribute to offsetting the ecological impacts of changes in precipitation for species not limited to extreme soil moisture conditions. In conclusion, soil moisture is a key driver of vegetation properties, both at the species- and community-level, even in this low energy system. Soil moisture conditions represent an important mechanism through which changing climatic conditions impact vegetation, and advancing our predictive capability will therefore require a better understanding of how soil moisture mediates the effects of climate change on biota. This article is protected by copyright. All rights reserved.

Description: Global nitrogen (N) enrichment has resulted in increased nitrous oxide (N 2 O) emission that greatly contributes to climate change and stratospheric ozone destruction, but little is known about the N 2 O emissions from urban river networks receiving anthropogenic N inputs. We examined N 2 O saturation and emission in the Shanghai city river network, covering 6300 km 2 , over 27 months. The overall mean saturation and emission from 87 locations was 770% and 1.91 mg N 2 O-N•m −2 •d −1 , respectively. N 2 O saturation did not exhibit a clear seasonality, but the temporal pattern was co-regulated by both water temperature and N loadings. Rivers draining through urban and suburban areas receiving more sewage N inputs had higher N 2 O saturation and emission than those in rural areas. Regression analysis indicated that water ammonium (NH 4 + ) and dissolved oxygen (DO) level had great control on N 2 O production and were better predictors of N 2 O emission in urban watershed. About 0.29 Gg N 2 O-N•yr −1 N 2 O was emitted from the Shanghai river network annually, which was about 131% of IPCC's prediction using default emission values. Given the rapid progress of global urbanization, more study efforts, particularly on nitrification and its N 2 O yielding, are needed to better quantify the role of urban rivers in global riverine N 2 O emission. This article is protected by copyright. All rights reserved.

Description: Our ability to project the impact of global change on marine ecosystem is limited by our poor understanding on how to predict species sensitivity. For example, the impact of ocean acidification is highly species-specific, even in closely related taxa. The aim of this study was to test the hypothesis that the tolerance range of a given species to decreased pH corresponds to their natural range of exposure. Larvae of the green sea urchin Strongylocentrotus droebachiensis were cultured from fertilization to metamorphic competence (29 days) under a wide range of pH (from pH T =8.0/ p CO 2 ≈480μatm to pH T =6.5/ p CO 2 ≈20000μatm) covering present (from pH T 8.7 to 7.6), projected near-future's variability (from pH T 8.3 to 7.2) and beyond. Decreasing pH impacted all tested parameters (mortality, symmetry, growth, morphometry and respiration). Development of normal, although showing morphological plasticity, swimming larvae was possible as low as pH T ≥7.0. Within that range, decreasing pH increased mortality and asymmetry and decreased body length growth rate. Larvae raised at lowered pH and with similar body length had shorter arms and a wider body. Relative to a given body length, respiration rates and stomach volume both increased with decreasing pH suggesting changes in energy budget. At the lowest pHs (pH T ≤6.5), all the tested parameters were strongly negatively affected and no larva survived past 13 days post-fertilization. In conclusion, sea urchin larvae appeared to be highly plastic when exposed to decreased pH until a physiological tipping point at pH T =7.0. However, this plasticity was associated with direct (increased mortality) and indirect (decreased growth) consequences for fitness. This article is protected by copyright. All rights reserved.

Description: With a pace of about twice the observed rate of global warming, the temperature on the Qinghai-Tibetan Plateau (Earth's “third pole”) has increased by 0.2 °C per decade over the past 50 years, which results in significant permafrost thawing and glacier retreat. Our review suggested that warming enhanced net primary production (NPP) and soil respiration, decreased methane (CH 4 ) emissions from wetlands and increased CH 4 consumption of meadows, but might increase CH 4 emissions from lakes. Warming induced permafrost thawing and glaciers melting would also result in substantial emission of old carbon dioxide (CO 2 ) and CH 4 . Nitrous oxide (N 2 O) emission was not stimulated by warming itself, but might be slightly enhanced by wetting. However, there are many uncertainties in such biogeochemical cycles under climate change. Human activities (e.g., grazing, land cover changes) further modified the biogeochemical cycles and amplified such uncertainties on the plateau. If the projected warming and wetting continues, the future biogeochemical cycles will be more complicated. So facing research in this field is an ongoing challenge of integrating field observations with process-based ecosystem models to predict the impacts of future climate change and human activities at various temporal and spatial scales. To reduce the uncertainties and improve the precision of the predictions of the impacts of climate change and human activities on biogeochemical cycles, efforts should focus on conducting more field observation studies, integrating data within improved models, and developing new knowledge about coupling among carbon, nitrogen, and phosphorus biogeochemical cycles as well as about the role of microbes in these cycles. This article is protected by copyright. All rights reserved.

Description: Some species are adapting to changing environments by expanding their geographic ranges. Understanding whether range shifts will be accompanied by increased exposure to other threats is crucial to predicting when and where new populations could successfully establish. If species overlap to a greater extent with human development under climate change, this could form ecological traps which are attractive to dispersing individuals, but the use of which substantially reduces fitness. Until recently, the core nesting range for the Critically Endangered Kemp's ridley sea turtle ( Lepidochelys kempii ) was ~1,000km of sparsely populated coastline in Tamaulipas, Mexico. Over the past twenty-five years, this species has expanded its range into populated areas of coastal Florida (〉1,500km outside the historical range), where nesting now occurs annually. Suitable Kemp's ridley nesting habitat has persisted for at least 140,000 years in the western Gulf of Mexico, and climate change models predict further nesting range expansion into the eastern Gulf of Mexico and northern Atlantic Ocean. Range expansion is 6-12% more likely to occur along uninhabited stretches of coastline than are current nesting beaches, suggesting that novel nesting areas will not be associated with high levels of anthropogenic disturbance. Although the high breeding-site fidelity of some migratory species could limit adaptation to climate change, rapid population recovery following effective conservation measures may enhance opportunities for range expansion. Anticipating the interactive effects of past or contemporary conservation measures, climate change, and future human activities will help focus long-term conservation strategies. This article is protected by copyright. All rights reserved.

Description: We combine satellite and ground observations during 1950-2011 to study the long-term links between multiple climate (air temperature and cryospheric dynamics) and vegetation (greenness and atmospheric CO2 concentrations) indicators of the growing season of northern ecosystems (〉45oN) and their connection with the carbon cycle. During the last three decades, the thermal potential growing season has lengthened by about 10.5 days ( p 〈 0.01, 1982–2011), which is unprecedented in the context of the past 60 years. The overall lengthening has been stronger and more significant in Eurasia (12.6 days, p 〈 0.01) than North America (6.2 days, p 〉 0.05). The photosynthetic growing season has closely tracked the pace of warming and extension of the potential growing season in spring, but not in autumn when factors such as light and moisture limitation may constrain photosynthesis. The autumnal extension of the photosynthetic growing season since 1982 appears to be about half that of the thermal potential growing season, yielding a smaller lengthening of the photosynthetic growing season (6.7 days at circumpolar scale, p 〈 0.01). Nevertheless, when integrated over the growing season, photosynthetic activity has closely followed the interannual variations and warming trend in cumulative growing season temperatures. This lengthening and intensification of the photosynthetic growing season, manifested principally over Eurasia rather than North America, is associated with a long-term increase (22.2% since 1972, p 〈 0.01) in the amplitude of the CO2 annual cycle at northern latitudes. The springtime extension of the photosynthetic and potential growing seasons has apparently stimulated earlier and stronger net CO2 uptake by northern ecosystems, while the autumnal extension is associated with an earlier net release of CO2 to the atmosphere. These contrasting responses may be critical in determining the impact of continued warming on northern terrestrial ecosystems and the carbon cycle. This article is protected by copyright. All rights reserved.

Description: Coastal wetlands have the capacity to retain and denitrify large quantities of reactive nitrogen (N), making them important in attenuating increased anthropogenic N flux to coastal ecosystems. The ability of coastal wetlands to retain and transform N is being reduced by wetland losses resulting from land development. Nitrogen retention in coastal wetlands is further threatened by the increasing frequency and spatial extent of saltwater-inundation in historically freshwater ecosystems, due to the combined effects of dredging, declining river discharge to coastal areas due to human water use, increased drought frequency, and accelerating sea-level rise. Because saltwater incursion may affect N cycling through multiple mechanisms, the impacts of salinization on coastal freshwater wetland N retention and transformation are not well understood. Here, we show that repeated annual saltwater incursion during late summer droughts in the coastal plain of North Carolina changed N export from organic to inorganic forms and led to a doubling of annual NH 4 + export from a 440 hectare former agricultural field undergoing wetland restoration. Soil solution NH 4 + concentrations in two mature wetlands also increased with salinization, but the magnitude of increase was smaller than in the former agricultural field. Long-term saltwater exposure experiments with intact soil columns demonstrated that much of the increase in reactive N released could be explained by exchange of salt cations with sediment NH 4 + . Using these findings together with the predicted flooding of 1661 km 2 of wetlands along the NC coast by 2100, we estimate that saltwater incursion into these coastal areas could release up to 18,077 Mg N, or approximately half the annual NH 4 + flux of the Mississippi River. Our results suggest that that saltwater incursion into coastal freshwater wetlands globally could lead to increased N loading to sensitive coastal waters. This article is protected by copyright. All rights reserved.

Description: Recently there have been several studies using open top chambers (OTCs) or cloches to examine the response of Arctic plant communities to artificially elevated temperatures. Few, however, have investigated multi-trophic systems, or the effects of both temperature and vertebrate grazing treatments on invertebrates. This study investigated trophic interactions between an herbivorous insect ( Sitobion calvulum , Aphididae), a woody perennial host plant ( Salix polaris ) and a selective vertebrate grazer (barnacle geese, Branta leucopsis ). In a factorial experiment, the responses of the insect and its host to elevated temperatures using open top chambers (OTCs) and to three levels of goose grazing pressure were assessed over two summer growing seasons (2004 and 2005). OTCs significantly enhanced the leaf phenology of Salix in both years and there was a significant OTC by goose presence interaction in 2004. Salix leaf number was unaffected by treatments in both years, but OTCs increased leaf size and mass in 2005. Salix reproduction and the phenology of flowers were unaffected by both treatments. Aphid densities were increased by OTCs but unaffected by goose presence in both years. While goose presence had little effect on aphid density or host plant phenology in this system, the OTC effects provide interesting insights into the possibility of phenological synchrony disruption. The advanced phenology of Salix effectively lengthens the growing season for the plant, but despite a close association with leaf maturity, the population dynamics of the aphid appeared to lack a similar phenological response except for the increased population observed. This article is protected by copyright. All rights reserved.

Description: Evidence is accumulating that species’ responses to climate changes are best predicted by modelling the interaction of physiological limits, biotic processes and the effects of dispersal-limitation. Using commercially harvested blacklip ( Haliotis rubra ) and greenlip abalone ( H. laevigata ) as case studies, we determine the relative importance of accounting for interactions among physiology, metapopulation dynamics and exploitation in predictions of range (geographical occupancy) and abundance (spatially explicit density) under various climate change scenarios. Traditional correlative ecological niche models (ENM) predict that climate change will benefit the commercial exploitation of abalone by promoting increased abundances without any reduction in range size. However, models that account simultaneously for demographic processes and physiological responses to climate-related factors result in future (and present) estimates of area of occupancy and abundance that differ from those generated by ENMs alone. Range expansion and population growth are unlikely for blacklip abalone because of important interactions between climate-dependent mortality and metapopulation processes; in contrast, greenlip abalone should increase in abundance despite a contraction in area of occupancy. The strongly non-linear relationship between abalone population size and area of occupancy has important ramifications for the use of ENM predictions that rely on metrics describing change in habitat area as proxies for extinction risk. These results show that predicting species’ responses to climate change often require physiological information to understand climatic range determinants, and a metapopulation model that can make full use of this data to more realistically account for processes such as local extirpation, demographic rescue, source-sink dynamics and dispersal-limitation. This article is protected by copyright. All rights reserved.

Description: An elevated atmospheric CO 2 concentration ([CO 2 ]) can reduce stomatal conductance of leaves for most plant species, including rice ( Oryza sativa L.). However, few studies have quantified seasonal changes in the effects of elevated [CO 2 ] on canopy evapotranspiration, which integrates the response of stomatal conductance of individual leaves with other responses, such as leaf area expansion, changes in leaf surface temperature, and changes in developmental stages, in field conditions. We conducted a field experiment to measure seasonal changes in stomatal conductance of the uppermost leaves and in the evapotranspiration, transpiration, and evaporation rates using a lysimeter method. The study was conducted for flooded rice under open-air CO 2 elevation. Stomatal conductance decreased by 27% under elevated [CO 2 ], averaged throughout the growing season, and evapotranspiration decreased by an average of 5% during the same period. The decrease in daily evapotranspiration caused by elevated [CO 2 ] was more significantly correlated with air temperature and leaf area index rather than with other parameters of solar radiation, days after transplanting, vapor-pressure deficit and FAO reference evapotranspiration. This indicates that higher air temperatures, within the range from 16 to 27 °C, and a larger leaf area index, within the range from 0 to 4 m 2 m −2 , can increase the magnitude of the decrease in evapotranspiration rate caused by elevated [CO 2 ]. The crop coefficient (i.e., the evapotranspiration rate divided by the FAO reference evapotranspiration rate) was 1.24 at ambient [CO 2 ] and 1.17 at elevated [CO 2 ]. This study provides the first direct measurement of the effects of elevated [CO 2 ] on rice canopy evapotranspiration under open-air conditions using the lysimeter method, and the results will improve future predictions of water use in rice fields. © 2013 Blackwell Publishing Ltd

Description: Forests around the world are subject to risk of high rates of tree growth decline and increased tree mortality from combinations of climate warming and drought, notably in semi-arid settings. Here we assess how climate warming has affected tree growth in one of the world's most extensive zones of semi-arid forests, in Inner Asia, a region where lack of data limits our understanding of how climate change may impact forests. We show that pervasive tree growth declines since 1994 in Inner Asia have been confined to semi-arid forests where growing season water stress has been rising due to warming-induced increases in atmospheric moisture demand. A causal link between increasing drought and declining growth at semi-arid sites is corroborated by correlation analyses comparing annual climate data to records of tree-ring widths. These ring-width records tend to be substantially more sensitive to drought variability at semi-arid sites than at semi-humid sites. Fire occurrence and insect/pathogen attacks have increased in tandem with the most recent (2007-2009) documented episode of tree mortality. If warming in Inner Asia continues, further increases in forest stress and tree mortality could be expected, potentially driving the eventual regional loss of current semi-arid forests. © 2013 Blackwell Publishing Ltd

Description: The Humboldt Current System (HCS) sustains the world′s largest small pelagic fishery. While a cooling of this system has been observed during recent decades, there is debate about the potential impacts of rising atmospheric CO 2 concentrations on upwelling dynamics and productivity. Recent studies suggest that under increased atmospheric CO 2 scenarios the oceanic stratification may strongly increase and upwelling-favorable winds may remain nearly constant off Peru and increase off Chile. Here we investigate the impact of such climatic conditions on egg and larval dispersal phases, a key stage of small pelagic fish reproduction. We used larval retention rate in a predefined nursery area to provide a proxy for the recruitment level. Numerical experiments are based on hydrodynamics downscaled to the HCS from global simulations forced by pre-industrial (PI), 2xCO 2 and 4xCO 2 scenarios. A biogeochemical model is applied to the PI and 4xCO 2 scenarios in order to define a time-variable nursery area where larval survival is optimum. We test two distinct values of the oxycline depth that limits larval vertical distribution: one corresponding to the present-day situation and the other corresponding to a shallower oxycline potentially produced by climate change. It appeared that larval retention over the continental shelf increases with enhanced stratification due to regional warming. However, this increase in retention is largely compensated for by a decrease of the nursery area and the shoaling of the oxycline. The underlying dynamics are explained by a combination of stratification effects and mesoscale activity changes. Our results therefore show that future climate change may significantly reduce fish capacity in the HCS with strong ecological, economic and social consequences. © 2013 Blackwell Publishing Ltd

Description: Adoption of reduced-impact logging (RIL) methods could reduce CO 2 emissions by 30-50% across at least 20% of remaining tropical forests. We developed two cost effective and robust indices for comparing the climate benefits (reduced CO 2 emissions) due to RIL. The indices correct for variability in the volume of commercial timber among concessions. We determined that a correction for variability in terrain slope was not needed. We found that concessions certified by the Forest Stewardship Council (FSC, N=3), when compared with non-certified concessions (N=6), did not have lower overall CO 2 emissions from logging activity (felling, skidding, and hauling). On the other hand, FSC certified concessions did have lower emissions from one type of logging impact (skidding), and we found evidence of a range of improved practices using other field metrics. One explanation for these results may be that FSC criteria and indicators, and associated RIL practices, were not designed to achieve overall emissions reductions. Also, commonly used field metrics are not reliable proxies for overall logging emissions performance. Further, the simple distinction between certified and non-certified concessions does not fully represent the complex history of investments in improved logging practices. To clarify the relationship between RIL and emissions reductions, we propose the more explicit term “RIL-C” to refer to the sub-set of RIL practices that can be defined by quantified thresholds and that result in measurable emissions reductions. If tropical forest certification is to be linked with CO 2 emissions reductions, certification standards need to explicitly require RIL-C practices. This article is protected by copyright. All rights reserved.

Description: Sequestration of atmospheric carbon (C) in soils through improved management of forest and agricultural land is considered to have high potential for global CO 2 mitigation. However, the potential of soils to sequester soil organic carbon (SOC) in a stable form, which is limited by the stabilization of SOC against microbial mineralization, is largely unknown. In this study, we estimated the C sequestration potential of soils in southeast Germany by calculating the potential SOC saturation of silt and clay particles according to Hassink (1997) on the basis of 516 soil profiles. The determination of the current SOC content of silt and clay fractions for major soil units and land uses allowed an estimation of the C saturation deficit corresponding to the long-term C sequestration potential. The results showed that cropland soils have a low level of C saturation of around 50% and could store considerable amounts of additional SOC. A relatively high C sequestration potential was also determined for grassland soils. In contrast, forest soils had a low C sequestration potential as they were almost C saturated. A high proportion of sites with a high degree of apparent oversaturation revealed that in acidic, coarse-textured soils the relation to silt and clay is not suitable to estimate the stable C saturation. A strong correlation of the C saturation deficit with temperature and precipitation allowed a spatial estimation of the C sequestration potential for Bavaria. In total, about 395 Mt CO 2 -equivalents could theoretically be stored in A horizons of cultivated soils – four times the annual emission of greenhouse gases in Bavaria. Although achieving the entire estimated C storage capacity is unrealistic, improved management of cultivated land could contribute significantly to CO 2 mitigation. Moreover, increasing SOC stocks have additional benefits with respect to enhanced soil fertility and agricultural productivity. This article is protected by copyright. All rights reserved.

Description: Drought affects more people than any other natural disaster but there is little understanding of how ecosystems react to droughts. This study jointly analyzed spatio-temporal changes of drought patterns with vegetation phenology and productivity changes between 1999 and 2010 in major European bioclimatic zones. The Standardized Precipitation and Evapotranspiration Index (SPEI) was used as drought indicator whereas changes in growing season length and vegetation productivity were assessed using remote sensing time-series of NDVI (Normalized Difference Vegetation Index). Drought spatio-temporal variability was analyzed using a Principal Component Analysis, leading to the identification of four major drought events between 1999 and 2010 in Europe. Correspondence Analysis showed that at the continental scale the productivity and phenology reacted differently to the identified drought events depending on ecosystem and land cover. Northern and Mediterranean ecosystems proved to be more resilient to droughts in terms of vegetation phenology and productivity developments. Western Atlantic regions and Eastern Europe showed strong agglomerations of decreased productivity and shorter vegetation growing season length, indicating that these ecosystems did not buffer the effects of drought well. In a climate change perspective, increase in drought frequency or intensity may result in larger impacts over these ecosystems, thus management and adaptation strategies should be strengthened in these areas of concerns. This article is protected by copyright. All rights reserved.

Description: ‘Humans are now the most significant driver of global change, propelling the planet into a new geological epoch, the Anthropocene’. This landmark statement from the Stockholm Memorandum (2011) is supported by an overwhelming consensus in the scientific literature (Cook et al ., 2013). It is crucial to acknowledge, however, that several of Earth's ecosystems are still little affected by direct human activity, and appropriate conservation measures are fully feasible and should be enforced accordingly (Caro et al ., 2012). Arctic marine ecosystems belong to this category. This article is protected by copyright. All rights reserved.

Description: The phenology of arctic ecosystems is driven primarily by abiotic forces, with temperature acting as the main determinant of growing season onset and leaf budburst in the spring. However, while the plant species in arctic ecosystems require differing amounts of accumulated heat for leaf-out, dynamic vegetation models simulated over regional to global scales typically assume some average leaf-out for all of the species within an ecosystem. Here, we make use of air temperature records and observations of spring leaf phenology collected across dominant groupings of species (dwarf birch shrubs, willow shrubs, other deciduous shrubs, grasses, sedges, and forbs) in arctic and boreal ecosystems in Alaska. We then parameterize a dynamic vegetation model based on these data for four types of tundra ecosystems (heath tundra, shrub tundra, wet sedge tundra, and tussock tundra), as well as ecotonal boreal white spruce forest, and perform model simulations for the years 1970 -2100. Over the course of the model simulations, we found changes in ecosystem composition under this new phenology algorithm compared to simulations with the previous phenology algorithm. These changes were the result of the differential timing of leaf-out, as well as the ability for the groupings of species to compete for nitrogen and light availability. Regionally, there were differences in the trends of the carbon pools and fluxes between the new phenology algorithm and the previous phenology algorithm, although these differences depended on the future climate scenario. These findings indicate the importance of leaf phenology data collection by species and across the various ecosystem types within the highly heterogeneous Arctic landscape, and that dynamic vegetation models should consider variation in leaf-out by groupings of species within these ecosystems to make more accurate projections of future plant distributions and carbon cycling in Arctic regions. This article is protected by copyright. All rights reserved.

Description: Two sources of complexity make predicting plant community response to global change particularly challenging. First, realistic global change scenarios involve multiple drivers of environmental change that can interact with one another to produce non-additive effects. Second, in addition to these direct effects, global change drivers can indirectly affect plants by modifying species interactions. In order to tackle both of these challenges, we propose a novel population modeling approach, requiring only measurements of abundance and climate over time. To demonstrate the applicability of this approach, we model population dynamics of eight abundant plant species in a multifactorial global change experiment in alpine tundra where we manipulated nitrogen, precipitation, and temperature over seven years. We test whether indirect and interactive effects are important to population dynamics and whether explicitly incorporating species interactions can change predictions when models are forecast under future climate change scenarios. For three of the eight species, population dynamics were best explained by direct effect models, for one species neither direct nor indirect effects were important, and for the other four species indirect effects mattered. Overall, global change had negative effects on species population growth, although species responded to different global change drivers, and single-factor effects were slightly more common than interactive direct effects. When the fitted population dynamic models were extrapolated under changing climatic conditions to the end of the century, forecasts of community dynamics and diversity loss were largely similar using direct effect models that do not explicitly incorporate species interactions or best fit models; however, inclusion of species interactions was important in refining the predictions for two of the species. The modeling approach proposed here is a powerful way of analyzing readily available datasets which should be added to our toolbox to tease apart complex drivers of global change. This article is protected by copyright. All rights reserved.

Description: Ecosystem carbon (C) accrual and storage can be enhanced by removing large herbivores as well as by the fertilizing effect of atmospheric nitrogen (N) deposition. These drivers are unlikely to operate independently, yet their combined effect on aboveground and belowground C storage remains largely unexplored. We sampled inside and outside 19 upland grazing exclosures, established for up to 80 years, across an N deposition gradient (5–24 kg N ha −1  yr −1 ) and found that herbivore removal increased aboveground plant C stocks, particularly in moss, shrubs and litter. Soil C storage increased with atmospheric N deposition, and this was moderated by the presence or absence of herbivores. In exclosures receiving above 11 kg N ha −1  year −1 , herbivore removal resulted in increased soil C stocks. This effect was typically greater for exclosures dominated by dwarf shrubs ( Calluna vulgaris ) than by grasses ( Molinia caerulea ). The same pattern was observed for ecosystem C storage. We used our data to predict C storage for a scenario of removing all large herbivores from UK heathlands. Predictions were made considering herbivore removal only (ignoring N deposition) and the combined effects of herbivore removal and current N deposition rates. Predictions including N deposition resulted in a smaller increase in UK heathland C storage than predictions using herbivore removal only. This finding was driven by the fact that the majority of UK heathlands receive low N deposition rates at which herbivore removal has little effect on C storage. Our findings demonstrate the crucial link between herbivory by large mammals and atmospheric N deposition, and this interaction needs to be considered in models of biogeochemical cycling.

Description: The temperature dependence of the reaction kinetics of the Rubisco enzyme implies that, at the level of a chloroplast, the response of photosynthesis to rising atmospheric CO 2 concentration (C a ) will increase with increasing air temperature. Vegetation models incorporating this interaction predict that the response of net primary productivity (NPP) to elevated CO 2 (eC a ) will increase with rising temperature, and will be substantially larger in warm tropical forests than in cold boreal forests. We tested these model predictions against evidence from eC a experiments by carrying out two meta-analyses. Firstly, we tested for an interaction effect on growth responses in factorial eC a x temperature experiments. This analysis showed a positive, but non-significant interaction effect (95% CI for above-ground biomass response = -0.8, 18.0%) between eC a and temperature. Secondly, we tested field-based eC a experiments on woody plants across the globe for a relationship between the eC a effect on plant biomass and mean annual temperature (MAT). This second analysis showed a positive but non-significant correlation between the eC a response and MAT. The magnitude of the interactions between CO 2 and temperature found in both meta-analyses were consistent with model predictions, even though both analyses gave non-significant results. Thus, we conclude that it is not possible to distinguish between the competing hypotheses of no interaction versus an interaction based on Rubisco kinetics from the available experimental database. Experiments in a wider range of temperature zones are required. Until such experimental data are available, model predictions should aim to incorporate uncertainty about this interaction. This article is protected by copyright. All rights reserved.

Description: In a letter to the editor Sundby (2015) expresses concerns about our study of changing spawning locations of the Northeast Arctic (NEA) stock of Atlantic cod over the period 1866-1969, where we identified statistically significant effects of the stock's demography whereas various climate indices all fell below statistical significance. Our conclusion on the role ascribed to climate disagrees with that of Sundby & Nakken (2008), which, based on a subset of our data and without considering demography, concluded that spawning was shifted northwards in warm periods. This article is protected by copyright. All rights reserved.

Description: Quantifying landscape-scale methane (CH 4 ) fluxes from boreal and arctic regions, and determining how they are controlled, is critical for predicting the magnitude of any CH 4 emission feedback to climate change. Furthermore, there remains uncertainty regarding the relative importance of small areas of strong methanogenic activity, versus larger areas with net CH 4 uptake, in controlling landscape-level fluxes. We measured CH 4 fluxes from multiple microtopographical subunits (sedge-dominated lawns, interhummocks and hummocks) within an aapa mire in subarctic Finland, as well as in drier ecosystems present in the wider landscape; lichen heath and mountain birch forest. An inter-comparison was carried out between fluxes measured using static chambers, up-scaled using a high resolution landcover map derived from aerial photography, and eddy covariance. Strong agreement was observed between the two methodologies, with emission rates greatest in lawns. CH 4 fluxes from lawns were strongly related to seasonal fluctuations in temperature, but their floating nature meant that water-table depth was not a key factor in controlling CH 4 release. In contrast, chamber measurements identified net CH 4 uptake in birch forest soils. An inter-comparison between the aerial photography and satellite remote sensing demonstrated that quantifying the distribution of the key CH 4 emitting and consuming plant communities was possible from satellite, allowing fluxes to be scaled up to a 100 km 2 area. For the full growing season (May to October), approximately 1.1 to 1.4 g CH 4 m −2 was released across the 100 km 2 area. This was based on up-scaled lawn emissions of 1.2 to 1.5 g CH 4 m −2 , versus an up-scaled uptake of 0.07 to 0.15 g CH 4 m −2 by the wider landscape. Given the strong temperature sensitivity of the dominant lawn fluxes, and the fact that lawns are unlikely to dry out, climate warming may substantially increase CH 4 emissions in northern Finland, and in aapa mire regions in general. This article is protected by copyright. All rights reserved.

Description: Intensification of agriculture to meet the global food, feed, and bioenergy demand entail increasing re-investment of carbon compounds (residues) into agro-systems to prevent decline of soil quality and fertility. However, agricultural intensification decreases soil methane uptake, reducing and even causing the loss of the methane sink function. In contrast to wetland agricultural soils (rice paddies), the methanotrophic potential in well-aerated agricultural soils have received little attention, presumably due to the anticipated low or negligible methane uptake capacity in these soils. Consequently, a detailed study verifying or refuting this assumption is still lacking. Exemplifying a typical agricultural practice, we determined the impact of bio-based residue application on soil methane flux, and determined the methanotrophic potential, including a qualitative (diagnostic microarray) and quantitative (group-specific qPCR assays) analysis of the methanotrophic community after residue amendments over two months. Unexpectedly, after amendments with specific residues we detected a significant transient stimulation of methane uptake confirmed by both the methane flux measurements and methane oxidation assay. This stimulation was apparently a result of induced cell-specific activity, rather than growth of the methanotroph population. Although transient, the heightened methane uptake offsets up to 16% of total gaseous CO 2 emitted during the incubation. The methanotrophic community, predominantly comprised of Methylosinus may facilitate methane oxidation in the agricultural soils. While agricultural soils are generally regarded as a net methane source or a relatively weak methane sink, our results show that methane oxidation rate can be stimulated, leading to higher soil methane uptake. Hence, even if agriculture exerts an adverse impact on soil methane uptake, implementing carefully designed management strategies (e.g. repeated application of specific residues) may compensate for the loss of the methane sink function following land-use change. This article is protected by copyright. All rights reserved.

Description: Methane is an important greenhouse gas but characterizing production by source sector has proven difficult. Current estimates suggest herbivores produce ~20% (~76-189 Tg yr −1 ) of methane globally, with wildlife contributions uncertain. We develop a simple and accurate method to estimate methane emissions and reevaluate production by wildlife. We find a strikingly robust relationship between body mass and methane output exceeding the scaling expected by differences in metabolic rate. Our allometric model gives a significantly better fit to empirical data than IPCC Tier 1 and 2 calculations. Our analysis suggests that: a) the allometric model provides an easier and more robust estimate of methane production than IPCC models currently in use, b) output from wildlife is much higher than previously considered, and c) because of the sublinear allometric scaling of methane output with body mass, national emissions could be reduced if countries favored more, smaller livestock, over fewer, larger ones. This article is protected by copyright. All rights reserved.

Description: Climate change is resulting in a rapid expansion of shrubs in the Arctic. This expansion has been shown to be reinforced by positive feedbacks, and it could thus set the ecosystem on a trajectory towards an alternate, more productive regime. Herbivores, on the other hand, are known to counteract the effects of simultaneous climate warming on shrub biomass. However, little is known about the impact of herbivores on resilience of these ecosystems, i.e . the capacity of a system to absorb disturbance and still remain in the same regime, retaining the same function, structure and feedbacks. Here we investigated how herbivores affect resilience of shrub-dominated systems to warming by studying the change of shrub biomass after a cessation of long-term experimental warming in a forest-tundra ecotone. As predicted, warming increased the biomass of shrubs, and in the absence of herbivores shrub biomass in tundra continued to increase four years after cessation of the artificial warming, indicating that positive effects of warming on plant growth may persist even over a subsequent colder period. Herbivores contributed to the resilience of these systems by returning them back to the original low-biomass regime in both forest and tundra habitats. These results support the prediction that higher shrub biomass triggers positive feedbacks on soil processes and microclimate, which enable maintaining the rapid shrub growth even in colder climates. Furthermore, the results show that in our system, herbivores facilitate the resilience of shrub-dominated ecosystems to climate warming. This article is protected by copyright. All rights reserved.

Description: Estuaries are dynamic environments at the land-sea interface that are strongly affected by inter-annual climate variability. Ocean-atmosphere processes propagate into estuaries from the sea and atmospheric processes over land propagate into estuaries from watersheds. We examined the effects of these two separate climate-driven processes on pelagic and demersal fish community structure along the salinity gradient in the San Francisco Estuary, California USA. A 33-year data set (1980-2012) on pelagic and demersal fishes spanning the freshwater to marine regions of the estuary suggested the existence of five estuarine salinity fish guilds: limnetic (salinity = 0-1), oligohaline (salinity = 1-12), mesohaline (salinity = 6-19), polyhaline (salinity = 19-28) and euhaline (salinity = 29-32). Climatic effects propagating from the adjacent Pacific Ocean, indexed by the North Pacific Gyre Oscillation (NPGO), affected demersal and pelagic fish community structure in the euhaline and polyhaline guilds. Climatic effects propagating over land, indexed as freshwater outflow from the watershed (OUT), affected demersal and pelagic fish community structure in the oligohaline, mesohaline, polyhaline, and euhaline guilds. The effects of OUT propagated further down the estuary salinity gradient than the effects of NPGO propagated up the estuary salinity gradient, exemplifying the role of variable freshwater outflow as an important driver of biotic communities in river-dominated estuaries. These results illustrate how unique sources of climate variability interact to drive biotic communities and, therefore, that climate change is likely to be an important driver in shaping the future trajectory of biotic communities in estuaries and other transitional habitats. This article is protected by copyright. All rights reserved.

Description: Wild fungi play a critical role in forest ecosystems, and its recollection is a relevant economic activity. Understanding fungal response to climate is necessary in order to predict future fungal production in Mediterranean forests under climate change scenarios. We used a 15 year data set to model the relationship between climate and epigeous fungal abundance and productivity, for mycorrhizal and saprotrophic guilds in a Mediterranean pine forest. The obtained models were used to predict fungal productivity for the 2021-2080 period by means of Regional Climate Change Models. Simple models based on early spring temperature and summer-autumn rainfall could provide accurate estimates for fungal abundance and productivity. Models including rainfall and climatic water balance showed similar results and explanatory power for the analyzed 15 year period. However, their predictions for the 2021-2080 period diverged. Rainfall based models predicted a maintenance of fungal yield, whereas water balance based models predicted a steady decrease of fungal productivity under a global warming scenario. Under Mediterranean conditions fungi responded to weather conditions in two distinct periods: early spring and late summer-autumn, suggesting a bimodal pattern of growth. Saprotrophic and mycorrhizal fungi showed differences in the climatic control. Increased atmospheric evaporative demand due to global warming might lead to a drop in fungal yields during the 21st century. This article is protected by copyright. All rights reserved.

Description: Animal assemblages fulfill a critical set of ecological functions for ecosystems that may be altered substantially as climate change-induced distribution changes lead to community disaggregation and reassembly. We combine species and community perspectives to assess the consequences of projected geographic range changes for the diverse functional attributes of avian assemblages worldwide. Assemblage functional structure is projected to change highly unevenly across space. These differences arise from both changes in the number of species and changes in species’ relative local functional redundancy or distinctness. They sometimes result in substantial losses of functional diversity that could have severe consequences for ecosystem health. Range expansions may counter functional losses in high-latitude regions, but offer little compensation in many tropical and subtropical biomes. Future management of local community function and ecosystem services thus relies on understanding the global dynamics of species distributions and multiscale approaches that include the biogeographic context of species traits.

Description: Temperature-dependent sex determination (TSD) is the predominant form of environmental sex determination (ESD) in reptiles, but the adaptive significance of TSD in this group remains unclear. Additionally, the viability of species with TSD may be compromised as climate gets warmer. We simulated population responses in a turtle with TSD to increasing nest temperatures and compared the results to those of a virtual population with genotypic sex determination (GSD) and fixed sex ratios. Then, we assessed the effectiveness of TSD as a mechanism to maintain populations under climate change scenarios. TSD populations were more resilient to increased nest temperatures and mitigated the negative effects of high temperatures by increasing production of female offspring and therefore, future fecundity. That buffered the negative effect of temperature on the population growth. TSD provides an evolutionary advantage to sea turtles. However, this mechanism was only effective over a range of temperatures and will become inefficient as temperatures rise to levels projected by current climate change models. Projected global warming threatens survival of sea turtles, and the IPCC high gas concentration scenario may result in extirpation of the studied population in 50 years.

Description: Increased reactive nitrogen (N r ) deposition has raised the amount of N available to organisms and has greatly altered the transfer of energy through food webs, with major consequences for trophic dynamics. The aim of this review is to: 1) clarify the direct and indirect effects of N r deposition on forest and lake food webs in N limited biomes, 2) compare and contrast how aquatic and terrestrial systems respond to increased N r deposition, and 3) identify how the nutrient pathways within and between ecosystems change in response to N r deposition. We present that N r deposition releases primary producers from N limitation in both forest and lake ecosystems and raises plants’ N-content which in turn benefits herbivores with high N requirements. Such trophic effects are coupled with a general decrease in biodiversity caused by different N-use efficiencies; Slow-growing species with low rates of N turnover are replaced by fast-growing species with high rates of N turnover. In contrast, N r deposition diminishes belowground production in forests, due to a range of mechanisms that reduce microbial biomass, and decreases lake benthic productivity by switching herbivore growth from N to phosphorus (P) limitation, and by intensifying P limitation of benthic fish. The flow of nutrients between ecosystems is expected to change with increasing N r deposition. Due to higher litter production and more intense precipitation, more terrestrial matter will enter lakes. This will benefit bacteria and will in turn boost the microbial food web. Additionally, N r deposition promotes emergent insects which subsidize the terrestrial food web as prey for insectivores or by dying and decomposing on land. So far most studies have examined N r deposition effects on the food web base, whereas our review highlights that changes at the base of food webs substantially impact higher trophic levels and therefore food web structure and functioning. This article is protected by copyright. All rights reserved.

Description: Elevated atmospheric CO 2 generally enhances plant growth, but the magnitude of the effects depend, in part, on nutrient availability and plant photosynthetic pathway. Due to their pivotal role in nutrient cycling, changes in abundance of detritivores could influence the effects of elevated atmospheric CO 2 on essential ecosystem processes, such as decomposition and primary production. We conducted a field survey and a microcosm experiment to test the influence of changes in detritus based food chains on litter mass loss and plant growth response to elevated atmospheric CO 2 using two wetland plants: a C 3 sedge ( Scirpus olneyi ) and a C 4 grass ( Spartina patens ). Our field study revealed that organism's sensitivity to climate increased with trophic level resulting in strong inter-annual variation in detritus based food chain length. Our microcosm experiment demonstrated that increased detritivore abundance could not only enhance decomposition rates, but also enhance plant growth of S. olneyi in elevated atmospheric CO 2 conditions. In contrast, we found no evidence that changes in the detritus-based food chains influenced the growth of S. patens . Considered together, these results emphasize the importance of approaches that unite traditionally subdivided food web compartments and plant physiological processes to understand inter-annual variation in plant production response to elevated atmospheric CO 2. This article is protected by copyright. All rights reserved.

Description: Selective herbivory of palatable plant species provides a competitive advantage for unpalatable plant species, which often have slow growth rates and produce slowly decomposable litter. We hypothesized that through a shift in the vegetation community from palatable, deciduous dwarf shrubs to unpalatable, evergreen dwarf shrubs, selective herbivory may counteract the increased shrub abundance that is otherwise found in tundra ecosystems, in turn interacting with the responses of ecosystem carbon (C) stocks and CO 2 balance to climatic warming. We tested this hypothesis in a 19-year field experiment with factorial treatments of warming and simulated herbivory on the dominant deciduous dwarf shrub Vaccinium myrtillus . Warming was associated with a significantly increased vegetation abundance, with the strongest effect on deciduous dwarf shrubs, resulting in greater rates of both gross ecosystem production (GEP) and ecosystem respiration (ER) as well as increased C stocks. Simulated herbivory increased the abundance of evergreen dwarf shrubs, most importantly Empetrum nigrum ssp. hermaphroditum, which led to a recent shift in the dominant vegetation from deciduous to evergreen dwarf shrubs. Simulated herbivory caused no effect on GEP and ER or the total ecosystem C stocks, indicating that the vegetation shift counteracted the herbivore-induced C loss from the system. A larger proportion of the total ecosystem C stock was found aboveground, rather than belowground, in plots treated with simulated herbivory. We conclude that by providing a competitive advantage to unpalatable plant species with slow growth rates and long life spans, selective herbivory may promote aboveground C stocks in a warming tundra ecosystem and, through this mechanism, counteract C losses that result from plant biomass consumption. This article is protected by copyright. All rights reserved.

Description: The geographic range of a species is arguably the basic unit in biogeography and macroecology (Brown et al., 1996). In particular, there has been a long-standing interest in understanding the mechanisms that shape the immense interspecific variation in geographic range size, a question often framed around Rapoport's rule (Whitton et al. 2012). As an emergent species-level trait, range sizes reflect the interplay of ecological and evolutionary processes and are of utmost importance for predicting speciation-extinction dynamics (Jablonski 2008). This article is protected by copyright. All rights reserved.

Description: The global European eel ( Anguilla anguilla ) stock is critically endangered according to the IUCN, and the European Commission has urged the development of conservation plans aimed to ensure its viability. However, the complex life cycle of this panmictic species, which reproduces in the open ocean but spends most of its pre-reproductive life in continental waters (thus embracing a huge geographic range and a variety of habitat types), makes it difficult to assess the long-term effectiveness of conservation measures. The interplay between local and global stressors raises intriguing cross-scale conservation challenges that require a comprehensive modelling approach to be addressed. We developed a full life cycle model of the global European eel stock, encompassing both the oceanic and the continental phase of eel's life, and explicitly allowing for spatial heterogeneity in vital rates, availability of suitable habitat and settlement potential via a metapopulation approach. We calibrated the model against a long-term time series of global European eel catches, and used it to hindcast the dynamics of the stock in the past and project it over the 21st century under different management scenarios. Although our analysis relies on a number of inevitable simplifying assumptions and on data that may not embrace the whole range of variation in population dynamics at the small spatiotemporal scale, our hindcast is consistent with the general pattern of decline of the stock over recent decades. The results of our projections suggest that i ) habitat loss played a major role in the European eel decline; ii ) the viability of the global stock is at risk if appropriate protection measures are not implemented; iii ) the recovery of spawner escapement requires that fishing mortality is significantly reduced; iv ) the recovery of recruitment might not be feasible if reproductive output is not enhanced. This article is protected by copyright. All rights reserved.

Description: Santín et al. (2014) report the conversion of different boreal forest biomass pools to pyrogenic organic matter (PyOM) during a forest fire, and suggest that ~100 Tg C y −1 may be converted to PyOM in boreal forests globally. They further suggest that PyOM formation represents a missing C sink. The phrase ‘missing C sink’ derives from a lack of closure in the atmospheric C budget. Approximately ⅓ of the CO 2 emitted to the atmosphere via burning of fossil fuels and land use change cannot be accounted for after oceanic uptake and atmospheric accumulations are tallied (Schlesinger and Bernhardt 2013). This article is protected by copyright. All rights reserved.

Description: The important role of tropical forests in the global carbon cycle makes it imperative to assess changes in their carbon dynamics for accurate projections of future climate-vegetation feedbacks. Forest monitoring studies conducted over the past decades have found evidence for both increasing and decreasing growth rates of tropical forest trees. The limited duration of these studies restrained analyses to decadal scales and it is still unclear whether growth changes occurred over longer time scales, as would be expected if CO 2 fertilization stimulated tree growth. Furthermore, studies have so far dealt with changes in biomass gain at forest-stand level, but insights on species-specific growth changes – that ultimately determine community-level responses – are lacking. Here we analyse species-specific growth changes on a centennial scale, using growth data from tree-ring analysis for 13 tree species (~1300 trees), from three sites distributed across the tropics. We used an established (Regional Curve Standardization) and a new (Size Class Isolation) growth trend-detection method and explicitly assessed the influence of biases on the trend detection. In addition, we assessed whether aggregated trends were present within and across study sites. We found evidence for decreasing growth rates over time for 8-10 species, whereas increases were noted for two species and one showed no trend. Additionally, we found evidence for weak aggregated growth decreases at the site in Thailand and when analysing all sites simultaneously. The observed growth reductions suggest deteriorating growth conditions, perhaps due to warming. However, other causes cannot be excluded, such as recovery from large-scale disturbances or changing forest dynamics. Our findings contrast growth patterns that would be expected if elevated CO 2 would stimulate tree growth. These results suggest that commonly assumed growth increases of tropical forests may not occur, which could lead to erroneous predictions of carbon dynamics of tropical forest under climate change. This article is protected by copyright. All rights reserved.

Description: Organic carbon (OC) sequestration in degraded semi-arid environments by improved soil management is assumed to contribute substantially to climate change mitigation. However, information about the soil organic carbon (SOC) sequestration potential in steppe soils and their current saturation status remains unknown. In this study, we estimated the OC storage capacity of semi-arid grassland soils on the basis of remote, natural steppe fragments in Northern China. Based on the maximum OC saturation of silt and clay particles 〈20 μm, OC sequestration potentials of degraded steppe soils (grazing land, arable land, eroded areas) were estimated. The analysis of natural grassland soils revealed a strong linear regression between the proportion of the fine fraction and its OC content, confirming the importance of silt and clay particles for OC stabilization in steppe soils. This relationship was similar to derived regressions in temperate and tropical soils but on a lower level, probably due to a lower C input and different clay mineralogy. In relation to the estimated OC storage capacity, degraded steppe soils showed a high OC saturation of 78 to 85% despite massive SOC losses due to unsustainable land use. As a result, the potential of degraded grassland soils to sequester additional OC was generally low. This can be related to a relatively high contribution of labile SOC, which is preferentially lost in the course of soil degradation. Moreover, wind erosion leads to substantial loss of silt and clay particles and consequently results in a direct loss of the ability to stabilize additional OC. Our findings indicate that the SOC loss in semi-arid environments induced by intensive land use is largely irreversible. Observed SOC increases after improved land management mainly result in an accumulation of labile SOC prone to land use/climate changes and therefore cannot be regarded as contribution to long-term OC sequestration. This article is protected by copyright. All rights reserved.

Description: Global warming poses a threat to organisms with temperature-dependent sex determination because it can affect operational sex ratios. Using a multigenerational experiment with a marine fish, we provide the first evidence that parents developing from early life at elevated temperatures can adjust their offspring gender through nongenetic and nonbehavioural means. However, this adjustment was not possible when parents reproduced, but did not develop, at elevated temperatures. Complete restoration of the offspring sex ratio occurred when parents developed at 1.5 °C above the present-day average temperature for one generation. However, only partial improvement in the sex ratio occurred at 3.0 °C above average conditions, even after two generations, suggesting a limitation to transgenerational plasticity when developmental temperature is substantially increased. This study highlights the potential for transgenerational plasticity to ameliorate some impacts of climate change and that development from early life may be essential for expression of transgenerational plasticity in some traits.

Description: Knowledge of how temperature influences an organism's physiology and behaviour is of paramount importance for understanding and predicting the impacts of climate change on species’ interactions. While the behaviour of many organisms is driven by chemical information on which they rely to detect resources, conspecifics, natural enemies, and competitors, the effects of temperature on infochemical-mediated interactions remain largely unexplored. Here, we experimentally show that temperature strongly influences the emission of infochemicals by ladybeetle larvae which, in turn, modifies the oviposition behaviour of conspecific females. Temperature also directly affects female perception of infochemicals and their oviposition behaviour. Our results suggest that temperature-mediated effects on chemical communication can influence flows across system boundaries (e.g. immigration and emigration) and thus alter the dynamics and stability of ecological networks. We therefore argue that investigating the effects of temperature on chemical communication is a crucial step towards a better understanding of the functioning of ecological communities facing rapid environmental changes. This article is protected by copyright. All rights reserved.

Description: Tree-ring analysis is often used to assess long-term trends in tree growth. A variety of growth-trend detection methods (GDMs) exist to disentangle age/size trends in growth from long-term growth changes. However, these detrending methods strongly differ in approach, with possible implications for their output. Here we critically evaluate the consistency, sensitivity, reliability and accuracy of four most widely used GDMs: Conservative Detrending applies mathematical functions to correct for decreasing ring-widths with age; Basal Area Correction transforms diameter into basal-area growth; Regional Curve Standardization detrends individual tree-ring series using average age/size trends; and Size Class Isolation calculates growth trends within separate size classes. First, we evaluated whether these GDMs produce consistent results applied to an empirical tree-ring dataset of Melia azedarach , a tropical tree species from Thailand. Three GDMs yielded similar results – a growth decline over time – but the widely used Conservative Detrending method did not detect any change. Second, we assessed the sensitivity (probability of correct growth trend detection), reliability (1- probability of detecting false trends), and accuracy (whether the strength of imposed trends is correctly detected) of these GDMs, by applying them to simulated growth trajectories with different imposed trends: no trend, strong trends (-6% and +6% change per decade), and weak trends (-2%, +2%). All methods except Conservative Detrending, showed high sensitivity, reliability and accuracy to detect strong imposed trends. However, these were considerably lower in the weak or no-trend scenarios. Basal Area Correction showed good sensitivity and accuracy, but low reliability, indicating uncertainty of trend-detection using this method. Our study reveals that the choice of GDM influences results of growth-trend studies. We recommend applying multiple methods when analysing trends and encourage performing sensitivity and reliability analysis. Finally, we recommend Size Class Isolation and Regional Curve Standardization, as these methods showed highest reliability to detect long-term growth trends. This article is protected by copyright. All rights reserved.

Description: The success of conifers over much of the world's terrestrial surface is largely attributable to their tolerance to cold stress (i.e.,cold hardiness). Due to an increase in climate variability, climate change may reduce conifer cold hardiness, which in turn could impact ecosystem functioning and productivity in conifer-dominated forests. The expression of cold hardiness is a product of environmental cues (E), genetic differentiation (G), and their interaction (G×E), although few studies have considered all components together. To better understand and manage for the impacts of climate change on conifer cold hardiness, we conducted a common garden experiment replicated in three test environments (cool, moderate, warm) using 35 populations of coast Douglas-fir ( Pseudotsuga menziesii var. menziesii ) to test the hypotheses: 1)cool-temperature cues in fall are necessary to trigger cold hardening, 2)there is large genetic variation among populations in cold hardiness that can be predicted from seed-source climate variables, 3)observed differences among populations in cold hardiness in situ are dependent on effective environmental cues, 4)movement of seed-sources from warmer to cooler climates will increase risk to cold injury. During fall 2012, we visually assessed cold damage of bud, needle and stem tissues following artificial freeze tests. Cool-temperature cues (e.g., degree-hours below 2°C) at the test sites were associated with cold hardening, which were minimal at the moderate test site owing to mild fall temperatures. Populations differed 3-fold in cold hardiness, with winter minimum temperatures and fall frost dates as strong seed-source climate predictors of cold hardiness, and with summer temperatures and aridity as secondary predictors. Seed-source movement resulted in only modest increases in cold damage. Our findings indicate that increased fall temperatures delay cold hardening, warmer/drier summers confer a degree of cold hardiness, and seed-source movement from warmer to cooler climates may be a viable option for adapting coniferous forest to future climate. This article is protected by copyright. All rights reserved.

Description: The ongoing changes in vegetation spring phenology in temperate/cold regions are widely attributed to temperature. However, in arid/semiarid ecosystems the correlation between spring temperature and phenology is much less clear. We test the hypothesis that precipitation plays an important role in the temperature dependency of phenology in arid/semi-arid regions. We therefore investigated the influence of preseason precipitation on satellite-derived estimates of starting date of vegetation growing season (SOS) across the Tibetan Plateau (TP). We observed two clear patterns linking precipitation to SOS. First, SOS is more sensitive to inter-annual variations in preseason precipitation in more arid than in wetter areas. Spatially, an increase in long-term averaged preseason precipitation of 10 mm corresponds to a decrease of the precipitation sensitivity of SOS by about 0.01 day mm −1 . Second, SOS is more sensitive to variations in preseason temperature in wetter than in dryer areas of the plateau. A spatial increase in precipitation of 10 mm corresponds to an increase in temperature sensitivity of SOS of 0.25 day °C −1 (0.25-day SOS advance per 1-°C temperature increase). Those two patterns indicate both direct and indirect impacts of precipitation on SOS on TP. This study suggest a balance between maximizing benefit from the limiting climatic resource and minimizing the risk imposed by other factors. In wetter areas, the lower risk of drought allows greater temperature sensitivity of SOS to maximize the thermal benefit, which is further supported by the weaker inter-annual partial correlation between growing degree days and preseason precipitation. In more arid areas, maximizing the benefit of water requires greater sensitivity of SOS to precipitation, with reduced sensitivity to temperature. This study highlights the impacts of precipitation on SOS in a large cold and arid/semiarid region and suggests that influences of water should be included in SOS module of terrestrial ecosystem models for drylands. This article is protected by copyright. All rights reserved.

Description: In a recent study, Hamann et al . (2015) proposed a new algorithm for computing climatic velocity. The advantage of the new method in comparison to the classical one (Loaire et al ., 2009) was that it could effectively avoid infinite velocity and present scale-invariant property. Here, I showed that this novel method actually was a hybrid of two simple methods in species distribution modeling (SDMs). This article is protected by copyright. All rights reserved.

Description: Soil microorganisms regulate fundamental biochemical processes in plant litter decomposition and soil organic matter (SOM) transformation. Understanding how microbial communities respond to changes in vegetation is critical for improving predictions of how land cover change affects belowground carbon storage and nutrient availability. We measured intra- and interannual variability in soil and forest litter microbial community composition and activity via phospholipid fatty acid analysis (PLFA) and extracellular enzyme activity across a well-replicated, long-term chronosequence of secondary forests growing on abandoned pastures in the wet subtropical forest life zone of Puerto Rico. Microbial community PLFA structure differed between young, secondary forests and older secondary and primary forests, following successional shifts in tree species composition. These successional patterns held across seasons, but the microbial groups driving these patterns differed over time. Microbial community composition from the forest litter differed greatly from those in the soil, but did not show the same successional trends. Extracellular enzyme activity did not differ with forest succession, but varied by season with greater rates of potential activity in the dry seasons. We found few robust significant relationships among microbial community parameters and soil pH, moisture, carbon and nitrogen concentrations. Observed inter- and intrannual variability in microbial community structure and activity reveal the importance of a multiple, temporal, sampling strategy when investigating microbial community dynamics with land-use change. Successional control over microbial composition with forest recovery suggests strong links between above and belowground communities. This article is protected by copyright. All rights reserved.

Description: One of the most important contemporary issues for coral reefs, apart from the need to reduce green-house gas emissions, is to understand the vulnerability of reef corals to climate change, and to identify climate-change refugia. We recently used global species distribution models with two predictive variables, photosynthetically available radiation and sea-surface temperature, to identify 12 localities in the Indian and Pacific Oceans that may serve as reef-coral refugia from climate change (Cacciapagalia and van Woesik 2015). The two environmental variables were used as our main predictors because: (i) corals extract most of their metabolic resources from their endosymbionts that photosynthesize, and (ii) symbiotic dysfunction, observed as coral bleaching and subsequent coral mortality, occurs through the interaction between high light (photoinhibition) and high temperature anomalies. This article is protected by copyright. All rights reserved.

Description: Identifying the relative importance of climatic and other environmental controls on the inter-annual variability and trends in global land surface phenology and greenness is challenging. Firstly, quantifications of land surface phenology and greenness dynamics are impaired by differences between satellite datasets and phenology detection methods. Secondly, dynamic global vegetation models (DGVM) that can be used to diagnose controls still reveal structural limitations and contrasting sensitivities to environmental drivers. Thus we assessed the performance of a new developed phenology module within the LPJmL (Lund Potsdam Jena managed Lands) DGVM with a comprehensive ensemble of three satellite datasets of vegetation greenness and ten phenology detection methods, thereby thoroughly accounting for observational uncertainties. The improved and tested model allows us quantifying the relative importance of environmental controls on inter-annual variability and trends of land surface phenology and greenness at regional and global scales. We found that start of growing season inter-annual variability and trends are in addition to cold temperature mainly controlled by incoming radiation and water availability in temperate and boreal forests. Warming-induced prolongations of the growing season in high latitudes are dampened by a limited availability of light. For peak greenness, inter-annual variability and trends are dominantly controlled by water availability and land use and land cover change (LULCC) in all regions. Stronger greening trends in boreal forests of Siberia than in North America are associated to a stronger increase in water availability from melting permafrost soils. Our findings emphasize that in addition to cold temperatures, water availability is a co-dominant control for start of growing season and peak greenness trends at the global scale. This article is protected by copyright. All rights reserved.

Description: Carbon captured by marine organisms helps sequester atmospheric CO 2 , especially in shallow coastal ecosystems, where rates of primary production and burial of organic carbon (OC) from multiple sources are high. However, linkages between the dynamics of OC derived from multiple sources and carbon sequestration are poorly understood. We investigated the origin (terrestrial, phytobenthos derived, and phytoplankton derived) of particulate OC (POC) and dissolved OC (DOC) in the water column and sedimentary OC using elemental, isotopic, and optical signatures in Furen Lagoon, Japan. Based on these data analysis, we explored how OC from multiple sources contributes to sequestration via storage in sediments, water column sequestration, and air–sea CO 2 exchanges, and analyzed how the contributions vary with salinity in a shallow seagrass meadow as well. The relative contribution of terrestrial POC in the water column decreased with increasing salinity, whereas autochthonous POC increased in the salinity range 10–30. Phytoplankton-derived POC dominated the water column POC (65–95%) within this salinity range; however, it was minor in the sediments (3–29%). In contrast, terrestrial and phytobenthos-derived POC were relatively minor contributors in the water column but were major contributors in the sediments (49–78% and 19–36%, respectively), indicating that terrestrial and phytobenthos-derived POC were selectively stored in the sediments. Autochthonous DOC, part of which can contribute to long-term carbon sequestration in the water column, accounted for 〉25% of the total water column DOC pool in the salinity range 15–30. Autochthonous OC production decreased the concentration of dissolved inorganic carbon in the water column and thereby contributed to atmospheric CO 2 uptake, except in the low-salinity zone. Our results indicate that shallow coastal ecosystems function not only as transition zones between land and ocean but also as carbon sequestration filters. They function at different timescales, depending on the salinity, and OC sources.

Description: Future human well-being under climate change depends on the ongoing delivery of food, fibre and wood from the land-based primary sector. The ability to deliver these provisioning services depends on soil-based ecosystem services (e.g. carbon, nutrient and water cycling and storage), yet we lack an in-depth understanding of the likely response of soil-based ecosystem services to climate change. We review the current knowledge on this topic for temperate ecosystems, focusing on mechanisms that are likely to underpin differences in climate change responses between four primary sector systems: cropping, intensive grazing, extensive grazing, and plantation forestry. We then illustrate how our findings can be applied to assess service delivery under climate change in a specific region, using New Zealand as an example system. Differences in the climate-change responses of carbon and nutrient-related services between systems are largely driven by whether they are reliant on externally added or internally cycled nutrients, the extent to which plant communities could influence responses, and variation in vulnerability to erosion. The ability of soils to regulate water under climate change will mostly be driven by changes in rainfall, but can be influenced by different primary sector systems’ vulnerability to soil water repellency and differences in evapotranspiration rates. These changes in regulating services resulted in different potentials for increased biomass production across systems, with intensively managed systems being the most likely to benefit from climate change. Quantitative prediction of net effects of climate change on soil ecosystem services remains a challenge, in part due to knowledge gaps, but also due to the complex interactions between different aspects of climate change. Despite this challenge, it is critical to gain the information required to make such predictions as robust as possible given the fundamental role of soils in supporting human well-being. This article is protected by copyright. All rights reserved.

Description: Several studies have shown that satellite retrievals of solar-induced chlorophyll fluorescence (SIF) provide useful information on terrestrial photosynthesis or gross primary production (GPP). Here, we have incorporated equations coupling SIF to photosynthesis in a land surface model, the National Center for Atmospheric Research Community Land Model version 4 (NCAR CLM4) and have demonstrated its use as a diagnostic tool for evaluating the calculation of photosynthesis, a key process in a land surface model that strongly influences the carbon, water, and energy cycles. By comparing forward simulations of SIF, essentially as a byproduct of photosynthesis, in CLM4 with observations of actual SIF, it is possible to check whether the model is accurately representing photosynthesis and the processes coupled to it. We provide some background on how SIF is coupled to photosynthesis, describe how SIF was incorporated into CLM4, and demonstrate that our simulated relationship between SIF and GPP values are reasonable when compared with satellite (Greenhouse gases Observing SATellite; GOSAT) and in situ flux-tower measurements. CLM4 overestimates SIF in tropical forests, and we show that this error can be corrected by adjusting the maximum carboxylation rate (V max ) specified for tropical forests in CLM4. Our study confirms that SIF has the potential to improve photosynthesis simulation and thereby can play a critical role in improving land surface and carbon cycle models. This article is protected by copyright. All rights reserved.

Description: Half the global soil carbon (C) is held in high latitude systems. Climate change will expose these to warming and a shift towards plant communities with more labile C input. Labile C can also increase the rate of loss of native soil organic matter (SOM); a phenomenon termed ‘priming’. We investigated how warming (+1.1°C over ambient using open top chambers) and litter addition (90 g m −2 y −1 ) treatments in the Subarctic influenced the susceptibility of SOM mineralisation to priming, and its microbial underpinnings. Labile C appeared to inhibit the mineralisation of C from SOM by up to 60% within hours. In contrast, the mineralisation of N from SOM was stimulated by up to 300%. These responses occurred rapidly and were unrelated to microbial successional dynamics, suggesting catabolic responses. Considered separately, the labile-C inhibited C mineralisation is compatible with previously reported findings termed ‘preferential substrate utilisation’ or ‘negative apparent priming’, while the stimulated N mineralisation responses echo recent reports of ‘real priming’ of SOM mineralisation. However, C and N mineralisation responses derived from the same SOM source must be interpreted together: This suggested that the microbial SOM-use decreased in magnitude and shifted to components richer in N. This finding highlights that only considering SOM in terms of C may be simplistic, and will not capture all changes in SOM decomposition. The selective mining for N increased in climate change treatments with higher fungal dominance. In conclusion, labile C appeared to trigger catabolic responses of the resident microbial community that shifted the SOM mining to N-rich components; an effect that increased with higher fungal dominance. Extrapolating from these findings, the predicted shrub expansion in the Subarctic could result in an altered microbial use of SOM, selectively mining it for N-rich components, and leading to a reduced total SOM-use. This article is protected by copyright. All rights reserved.