ALBERT

Description: A mixture of red and blue light-emitting diodes (LEDs; at a ratio of 7:3, respectively) were used to analyze the effects of different photosynthetic photon flux densities (PPFDs) (40, 80, and 120 µmol m−2 s−1 hereafter known as LED 40, 80, and 120, respectively) on the micropropagation of Gerbera jamesonii Bolus shoots. The experiment also examined the effect of 6-benzyladenine (BA) in 1, 2.5, and 5 µM concentrations in the media. Biometrical observations and analyses of leaf morphometry and photosynthetic pigment content were conducted. Shoot multiplication increased with an increasing BA concentration. A PPFD of 80 µmol m−2 s−1 and 5 µM BA is suggested as efficient for shoot propagation and economically viable. LED 120 increased the leaf blade area and its width, and circularity and elongation ratios. The intensity of light did not affect the fresh weight, which increased at higher BA concentrations (2.5 and 5 μM). The dry weight content decreased with increasing cytokinin concentration; the greatest content was observed on media with 1 µM BA under PPFD 120 µmol m−2 s−1. LED 80 increased the photosynthetic pigments content in the leaves in comparison to the standard intensity of LED 40. Increased BA concentration raises the content of chlorophyll a.

Description: Soil pH is a key factor affecting the growth of blueberries. Understanding the response mechanism of blueberries to different pH values and selecting suitable evaluation indexes are the basis of breeding new blueberry cultivars with high pH tolerances. The effects of different soil pH treatments for 17 months on the plant growth, fruit yield, photosynthetic characteristics, and leaf microelement concentration of Vaccinium ashei Reade ‘Climax’ and V. corymbosum hybrid ‘Chaoyue No. 1′ were studied. Plant height, main stem diameter, branch number per plant, leaf dry weight, stem dry weight, root dry weight, and total dry weight decreased with increasing soil pH. With an increase in soil pH, the first flowering date, 50% flowering date, first ripening date, and 50% ripening date of the two cultivars were postponed, and the flower bud numbers per plant, the floret numbers per bud, and yield per plant showed a downward trend. Moreover, the fruit quality decreased, which was reflected in the increase in the titratable acid content (TA) and the decrease in the total soluble solids content (TSS) and the TSS:TA ratio in the high pH treatment. With increasing soil pH, the chlorophyll content index (CCI), maximal photochemical efficiency of the PSII (Fv/Fm), quantum photosynthetic yield of the PSII (Y(II)) and net photosynthetic rate (Pn) of the two cultivars showed a downward trend, and some microelement concentrations in the leaves were imbalanced. Under high pH treatment, ‘Chaoyue No. 1′ had a relatively higher plant biomass and fruit yield, so it had a stronger tolerance to high pH than ‘Climax’ did. More strongly acidified rhizosphere soil capacity, as well as higher CCI, Fv/Fm, Y(II), and Pn values were the main reasons for the high pH tolerance of ‘Chaoyue No. 1′. Compared with destructive biomass indicators such as plant weight, nondestructive indicators such as CCI, Fv/Fm, and Y(II) can be more valuable indicators for fast and accurate evaluation of blueberry tolerance to high pH at early stages of treatment.

Description: Due to its possible utilization in cosmetics, medicine and crop protection, as a valuable alternative to petrochemical-derived products, hemp essential oil is now considered a product with high value added and a promising marketing potential. This experiment was conducted with the aim of evaluating the effect of four different locations of Northern Italy during two years (four environments) and three hemp monoecious varieties on the production and quality of essential oils (EOs) obtained by inflorescences harvested at full flowering of female flowers. The highest inflorescence yield was obtained at Maiano 2017, where a superficial groundwater layer (1.5 m) was present, with values that ranged from 1.69 of Fedora to 2.06 t ha−1 of Futura. EOs production ranged between 3.4 and 4.9 L ha−1, affected mainly by the variety effect. The terpene in EOs, very similar between varieties and environments, was mainly composed of sesquiterpenes (caryophillene and humulene, as the most abundant) rather than monoterpenes (α-pinene, β-myrcene and trans-β-ocimene, in particular). Phytocannabinoids, and in particular cannabidiol (CBD), were not removed from tissues by the steam during hydrodistillation, and if this is confirmed by further experiments, the residual biomass, now considered as waste, could assume significant importance as a source for further utilization.

Description: The role of small bioactive molecules (〈500 Da) in mechanisms improving resource use efficiency in plants under stress conditions draws increasing interest. One such molecule is omeprazole (OMP), a benzimidazole derivative and inhibitor of animal proton pumps shown to improve nitrate uptake and exclusion of toxic ions, especially of chloride from the cytosol of salt-stressed leaves. Currently, OMP was applied as substrate drench at two rates (0 or 10 μM) on hydroponic basil (Ocimum basilicum L. cv. Genovese) grown under decreasing NO3−:Cl− ratio (80:20, 60:40, 40:60, or 20:80). Chloride concentration and stomatal resistance increased while transpiration, net CO2 assimilation rate and beneficial ions (NO3−, PO43−, and SO42−) decreased with reduced NO3−:Cl− ratio under the 0 μM OMP treatment. The negative effects of chloride were not only mitigated by the 10 μM OMP application in all treatments, with the exception of 20:80 NO3−:Cl−, but plant growth at 80:20, 60:40, and 40:60 NO3−:Cl− ratios receiving OMP application showed maximum fresh yield (+13%, 24%, and 22%, respectively), shoot (+10%, 25%, and 21%, respectively) and root (+32%, 76%, and 75%, respectively) biomass compared to the corresponding untreated treatments. OMP was not directly involved in ion homeostasis and compartmentalization of vacuolar or apoplastic chloride. However, it was active in limiting chloride loading into the shoot, as manifested by the lower chloride concentration in the 80:20, 60:40, and 40:60 NO3−:Cl− treatments compared to the respective controls (−41%, −37%, and −24%), favoring instead that of nitrate and potassium while also boosting photosynthetic activity. Despite its unequivocally beneficial effect on plants, the large-scale application of OMP is currently limited by the molecule’s high cost. However, further studies are warranted to unravel the molecular mechanisms of OMP-induced reduction of chloride loading to shoot and improved salt tolerance.

Description: There is a growing body of research that recognizes the potentials of biochar application in agricultural production systems. However, little is known about the effects of biochar, especially hydrochar, on production of containerized seedlings under nursery conditions. This study aimed to test the effects of hydrochar application on growth, quality, nutrient and heavy metal contents, and mycorrhizal association of containerized pine seedlings. The hydrochar used in this study was produced through hydrothermal carbonization of paper mill biosludge at 200 °C. Two forms of hydrochar (powder and pellet) were mixed with peat at ratios of 10% and 20% (v/v) under three levels of applied commercial fertilizer (nil, half and full rates). Application of hydrochar had positive or neutral effects on shoot biomass and stem diameter compared with control seedlings (without hydrochar) under tested fertilizer levels. Analysis of the natural logarithmic response ratios (LnRR) of quality index and nutrient and heavy metal uptake revealed that application of 20% (v/v) hydrochar powder or pellet with 50% fertilizer resulted in same quality pine seedlings with similar heavy metal (Cu, Ni, Pb, Zn and Cr) and nutrient (P, K, Ca and Mg) contents as untreated seedlings supplied with 100% fertilizer. Colonization percentage by ectomycorrhizae significantly increased when either forms of hydrochar were applied at a rate of 20% under unfertilized condition. The results of this study implied that application of proper rates of hydrochar from biosludge with adjusted levels of liquid fertilizer may reduce fertilizer requirements in pine nurseries.

Description: The tank cascade system (TCS) has been used for over 2000 years for water management in Sri Lanka. Since surface water is limited in the dry zone of Sri Lanka, agricultural production, especially of upland crops, relies on groundwater for irrigation. We sampled 29 wells in the Ulagalla cascade, a prominent TCS near Anuradhapura city in the dry zone of Sri Lanka, in Yala (dry) and Maha (wet) seasons, the two main cropping seasons in Sri Lanka. We evaluated the suitability of groundwater for irrigation using the analytic hierarchy process and geographical information system. Water quality did not vary notably between seasons. However, it deteriorated with the onset of high intensity heavy rain, especially during the Maha season. A water quality zoning map indicated that groundwater in 4% and 96% of the study area is suitable and moderately suitable for irrigation, respectively. Irrigation water quality in tank cascade landscapes and similar environments can be assessed using this methodology and our results.

Description: Soils in tropical croplands are becoming degraded because of soil carbon (C) depletion. Local farmers in South India use a specific management of traditional cultivation, i.e., broadcast seeding. However, for sustainable C management, there is no quantitative data on the CO2 flux under this management. Our objectives were to (1) estimate the annual CO2 flux, and (2) evaluate the effect of traditional cultivation management (seeding rate) on the CO2 flux. Our field experiment was conducted in South India, from 2015 to 2017, including two cultivation periods with four cultivation management treatments (traditional cultivation management plot (T), fixed density plot (FD), no thinning plot (NT), and bare plot (B)). The seeding rate in the FD plot was ca. 50% of the T plot. We applied 1.1 Mg C ha−1 farmyard manure just before the experiment as a C input. We found that broadcasting, thinning, and cultivation increased soil moisture, while the CO2 efflux rate showed no significant difference between treatments throughout the experimental period. This indicates that cultivation management did not affect the CO2 flux. The total CO2 fluxes for two years were estimated at 2.2–2.7 Mg C ha−1. Our results indicate that it is necessary to apply larger or more frequent C inputs to prevent C depletion.

Description: The rye (Secale cereale L.) 5R chromosome contains some elite genes that can be used to improve wheat cultivars. In this study, a set of 5RKu dissection lines was obtained, and 111 new PCR-based and 5RKu-specific markers were developed using the specific length amplified fragment sequencing (SLAF-seq) method. The 111 markers were combined with the 52 5RKu-specific markers previously reported, and 65 S. cereale Lo7 scaffolds were physically mapped to six regions of the 5RKu chromosome using the 5RKu dissection lines. Additionally, the 5RLKu arm carried stripe rust resistance gene(s) and it was located to the region L2, the same region where 22 5RKu-specific markers and 11 S. cereale Lo7 scaffolds were mapped. The stripe rust resistance gene(s) located in the 5RLKu arm might be new one(s) because its source and location are different from the previously reported ones, and it enriches the resistance source of stripe rust for wheat breeding programs. The markers and the S. cereale Lo7 scaffolds that were mapped to the six regions of the 5RKu chromosome can facilitate the utilization of elite genes on the 5R chromosome in the improvement of wheat cultivars.

Description: Assessing and prescribing fertilizer use is critical to profitable and sustainable coffee production, and this is becoming a priority concern for the Robusta coffee industry. In this study, annual survey data of 798 farms across selected Robusta coffee-producing provinces in Vietnam and Indonesia between 2008 and 2017 were used to comparatively assess the fertilizer management strategies in these countries. Specifically, we aimed to characterize fertilizer use patterns in the key coffee-growing provinces and discuss the potential for improving nutrient management practices. Four types of chemical (NPK, super phosphate, potassium chloride and urea) and two of natural (compost and lime) fertilizers were routinely used in Vietnam. In Indonesia, NPK and urea were supplemented only with compost. Farmers in Vietnam applied unbalanced quantities of chemical fertilizers (i.e., higher rates than recommended) and at a constant rate between years whereas Indonesian farmers applied well below the recommended rates because of poor accessibility and financial support. The overuse of chemical fertilizers in Vietnam threatens the sustainability of Robusta coffee farming. Nevertheless, there is a potential for improvement in both countries in terms of nutrient management and sustainability of Robusta coffee production by adopting the best local fertilizer management practices.

Description: Perennial ryegrass (Lolium perenne L.) is one of the most important forage grass species in temperate regions of the world, but it is prone to having poor persistence due to the incidence of abiotic and biotic stresses. This creates a challenge for livestock producers to use their agricultural lands more productively and intensively within sustainable limits. Breeding perennial ryegrass cultivars that are both productive and persistent is a target of forage breeding programs and will allow farmers to select appropriate cultivars to deliver the highest profitability over the lifetime of a sward. Conventional methods for the estimation of pasture persistence depend on manual ground cover estimation or counting the number of surviving plants or tillers in a given area. Those methods are subjective, time-consuming and/or labour intensive. This study aimed to develop a phenomic method to evaluate the persistence of perennial ryegrass cultivars in field plots. Data acquisition was conducted three years after sowing to estimate the persistence of perennial ryegrass using high-resolution aerial-based multispectral and ground-based red, green and blue(RGB) sensors, and subsequent image analysis. There was a strong positive relationship between manual ground cover and sensor-based ground cover estimates (p 〈 0.001). Although the manual plant count was positively correlated with sensor-based ground cover (p 〈 0.001) intra-plot plant size variation influenced the strength of this relationship. We conclude that object-based ground cover estimation is most suitable for use in large-scale breeding programs due to its higher accuracy, efficiency and repeatability. With further development, this technique could be used to assess temporal changes of perennial ryegrass persistence in experimental studies and on a farm scale.

Description: High input costs combined with multiple management and material inputs have threatened cotton productivity. We hypothesize that this problem can be addressed by a single fertilization at flowering with late sowing in a moderately populated plant stand. Field experiments were conducted to evaluate the cotton biomass accumulation, phosphorus dynamics, and fiber quality under three planting densities (low, 3 × 104; moderate, 6 × 104; and dense, 9 × 104 ha−1) and two cultivars (Zhongmian-16 and J-4B). High planting density had 6.2 and 12.6% larger stems and fruiting nodes m−2, while low density produced a 37.5 and 59.4% maximum height node ratio. Moderate density produced 26.4–15.5%, 24.7–12.6%, and 10.5–13.6% higher biomass accumulation rate at the peak bloom, boll set, and plant removal stages over low and high density in both years, respectively. J-4B produced a higher reproductive organs biomass yield when compared with Zhongmian-16 in both years. This higher biomass formation was due to both the higher average (0.8 VT kg·ha−1·d−1) and maximum (1.0 VM kg·ha−1·d−1) reproductive organ phosphorus uptake, respectively. Plants with low density had 5.3–18.5%, 9.5–15%, and 7.8–12.8% greater length, strength, and micronaire values over moderate and dense plants, respectively. Conclusively, moderate density with J-4B is a promising option for improved biomass, phosphorus acquisition, and fiber quality under a short season.

Description: Three rust diseases namely; stem rust caused by Puccinia graminis f. sp. tritici (Pgt), leaf rust caused by Puccinia triticina (Pt), and stripe rust caused by Puccinia striiformis f. sp. tritici (Pst), are the most common fungal diseases of wheat (Triticum aestivum L.) and cause significant yield losses worldwide including Australia. Recently characterized stripe rust resistance genes Yr51 and Yr57 are effective against pre- and post-2002 Pst pathotypes in Australia. Similarly, stem rust resistance genes Sr22, Sr26, and Sr50 are effective against the Pgt pathotype TTKSK (Ug99) and its derivatives in addition to commercially important Australian pathotypes. Effectiveness of these genes make them good candidates for combining with known pleiotropic adult plant resistance (PAPR) genes to achieve durable resistance against three rust pathogens. This study was planned to transfer rust resistance genes Yr51, Yr57, Sr22, Sr26, and Sr50 into two Australian (Gladius and Livingston) and two Indian (PBW550 and DBW17) wheat cultivars through marker assisted selection (MAS). These cultivars also carry other rust resistance genes: Gladius carries Lr37/Yr17/Sr38 and Sr24/Lr24; Livingston carries Lr34/Yr18/Sr57, Lr37/Yr17/Sr38, and Sr2; PBW550 and DBW17 carry Lr34/Yr18/Sr57 and Lr26/Yr9/Sr31. Donor sources of Yr51 (AUS91456), Yr57 (AUS91463), Sr22 (Sr22/3*K441), Sr26 (Sr26 WA1), and Sr50 (Dra-1/Chinese Spring ph1b/2/3* Gabo) were crossed with each of the recurrent parents to produce backcross progenies. Markers linked to Yr51 (sun104), Yr57 (gwm389 and BS00062676), Sr22 (cssu22), Sr26 (Sr26#43), and Sr50 (Sr50-5p-F3, R2) were used for their MAS and markers csLV34 (Lr34/Yr18/Sr57), VENTRIUP-LN2 (Lr37/Yr17/Sr38), Sr24#12 (Sr24/Lr24), and csSr2 (Sr2) were used to select genes present in recurrent parents. Progenies of selected individuals were grown and selected under field conditions for plant type and adult plant rust responses. Final selections were genotyped with the relevant markers. Backcross derivatives of these genes were distributed to breeding companies for use as resistance donors.

Description: Reducing soil tillage can lead to many benefits, but this practice often increases weed abundance and thus the need for herbicides, especially during the transition phase from inversion tillage to non-inversion tillage. We evaluated if subsidiary crops (SCs, e.g., cover crops) can mitigate the effects of non-inversion tillage on weed abundance. Two-year experiments studying SC use, tillage intensity, and nitrogen (N) fertilization level were carried out twice at six sites throughout northern and central Europe. SCs significantly reduced weed cover throughout the intercrop period (−55% to −1% depending on site), but only slightly during the main crops. Overall weed abundance and weed biomass were higher when using non-inversion tillage with SCs compared to inversion tillage without SCs. The effects differed due to site-specific weed pressure and management. With increasing weed pressure, the effect of SCs decreased, and the advantage of inversion over non-inversion tillage increased. N fertilization level did not affect weed abundance. The results suggest that SCs can contribute by controlling weeds but cannot fully compensate for reduced weed control of non-inversion tillage in the transition phase. Using non-inversion tillage together with SCs is primarily recommended in low weed pressure environments.

Description: Chamomile (Matricaria chamomilla L.) is a well-known medicinal plant species in which the products requested from the market are those that are derived from the organic system. The study was conducted to assess the allelopathic effects, as natural herbicides, of two essential oils extracted from oregano (Origanum vulgare L.) and rosemary (Rosmarimum officinalis L.), with the objective of exploring the possibility of their utilization for future weed management. A field experiment was conducted over two seasons, when the infestation of 15 different weed species was detected. Each essential oil was applied at two different concentrations (50% diluted and undiluted), three times during the chamomile crop under an organic farm system. The results demonstrated that the germination of different weed species was affected differently by the type of essential oils and especially by their concentrations. The undiluted oils inhibited most of the germination of several weed species, highlighting a significantly higher percentage of Weed Control Efficiency (WCE) and suggesting the potential to be used as bio-herbicides. Bioherbicidal weed control methods could offer an advantage with respect to hand weeding, particularly from an economic point of view.

Description: The establishment and application of a spectral library is a critical step in the standardization and automation of remote sensing interpretation and mapping. Currently, most spectral libraries are designed to support the classification of land cover types, whereas few are dedicated to agricultural remote sensing monitoring. Here, we gathered spectral observation data on plants in multiple experimental scenarios into a spectral database to investigate methods for crop classification (16 crop species) and status monitoring (tea plant and rice growth). We proposed a set of screening methods for spectral features related to plant classification and status monitoring (band reflectance, vegetation index, spectral differentiation, spectral continuum characteristics) that are based on ISODATA and JM distance. Next, we investigated the performance of different machine learning classifiers in the spectral library application, including K-nearest neighbor (KNN), Random Forest (RF), and a genetic algorithm coupled with a support vector machine (GA-SVM). The optimal combination of spectral features and the classifier with the highest classification accuracy were selected for crop classification and status monitoring scenarios. The GA-SVM classifier performed the best, which produced an accuracy of OAA = 0.94, Kappa = 0.93 for crop classification in a complex scenario (crops mixed with 71 non-crop plant species), and promising accuracies for tea plant growth monitoring (OAA = 0.98, Kappa = 0.97) and rice growth stage monitoring (OAA = 0.92, Kappa = 0.90). Therefore, the establishment of a plant spectral library combined with relevant feature extraction and a classification algorithm effectively supports agricultural monitoring by remote sensing.

Description: Crop models are useful tools to evaluate the effects of agricultural management on ecosystem services. However, before they can be applied with confidence, it is important to calibrate and validate crop models in the region of interest. In this study, the Environmental Policy Integrated Climate (EPIC) model was evaluated for its potential to simulate maize yield using limited data from field trials on two maize cultivars. Two independent fields at the Cradock Research Farm were used, one for calibration and one for validation. Before calibration, mean simulated yield was 8 t ha−1 while mean observed yield was 11.26 t ha−1. Model calibration improved mean simulated yield to 11.23 t ha−1 with a coefficient of determination, (r2) = 0.76 and a model efficiency (NSE) = 0.56. Validation with grain yield was satisfactory with r2 = 0.85 and NSE = 0.61. Calibration of potential heat units (PHUs) and soil-carbon related parameters improved model simulations. Although the study only used grain yield to calibrate and evaluate the model, results show that the calibrated model can provide reasonably accurate simulations. It can be concluded that limited data sets from field trials on maize can be used to calibrate the EPIC model when comprehensive experimental data are not available.

Description: Lemon processing generates thousands of tons of residues that can be preserved as flours by thermal treatment to obtain phenolic compounds with beneficial bioactivities. In this study, the effect of different drying temperatures (40, 50, 60, 70, 80, 90, 100 and 110 °C) on the Total Phenolic Content (TPC), antioxidant and antimicrobial activities of phenolic compounds present in Citrus. lemon (L.) Burn f waste was determined. Identification and quantification of phenolic compounds were also performed by UPLC-PDA and UPLC-ESI-MS analysis. Eriocitrin (19.79–27.29 mg g−1 DW) and hesperidin (7.63–9.10 mg g−1 DW) were detected as the major phenolic compounds in the flours by UPLC-PDA and confirmed by UPLC-ESI-MS. Antimicrobial activity determined by Minimum Inhibitory Concentration (MIC) against Salmonella typhimurium, Escherichia coli and Staphylococcus aureus was observed. Accordingly, a stable functional flour as a source of bioactive phenolic compounds obtained from lemon residues at 50 °C may be produced as a value-added product useful in various industrial sectors.

Description: Fusarium Head Blight (FHB, scab) is a destructive fungal disease that causes extensive yield and quality losses in wheat and other small cereals. Biological control of FHB is considered to be an alternative disease management strategy that is environmentally benign, durable, and compatible with other control measures. In this study, to screen antagonistic bacteria with the potential to manage FHB, 113 endophytes were isolated from the stems, leaves, panicles, and roots of wheat. Among them, six strains appeared to effectively inhibit Fusarium graminearum growth and one isolate, XS-2, showed a highly antagonistic effect against FHB. An in vitro antagonistic test of XS-2 on wheat heads confirmed that XS-2 could suppress the disease severity of FHB. The 16S rDNA sequence analysis revealed that XS-2 is a strain of Bacillus amyloliquefaciens. Antagonistic spectrum analyses showed that XS-2 had antagonistic effects against two and four types of cotton and fruit tree pathogens, respectively. The fermentation condition assays showed that glucose and peptone are the most suitable nutrient sources for XS-2, and that the optimal pH value and temperature for fermentation were 7.4 and 28 °C, respectively. Our study indicates that XS-2 has a good antagonistic effect on FHB and lays a theoretical foundation for the application of the strain as a biological agent in the field to control FHB.

Description: China has attained rice sufficiency with the increased use of nitrogen (N) fertilizer, but this has led to serious N pollution. China has the world’s highest use of N with the lowest N use efficiency (NUE). Including livestock production, China’s agriculture sector has surpassed industry as the greatest polluter of water. Using plastic film on raised-beds, combined with improved agronomic practices, can boost rice yield by 50% with 36% less N fertilizer use, 30% higher NUE, and stabilized the yield of 9.75 t ha−1. It also counters the effects of drought and low ambient temperature. A six-year study was conducted combining no-tillage, crop-residue mulch, and plastic cover, alternating organic rice and rapeseed production. All the treatments, fertilized with biogas slurry and rapeseed meal, gave rice yields of 7.0 to 10.7 t ha−1, well above China’s average of 6.5 t ha−1. In this time, soil organic matter increased from 1.6% to 4.2%. In the first four years, the combination of crop-residue mulch with plastic cover had a slightly higher yield than mulch alone. In the fifth and sixth years, the latter treatment surpassed the use of plastic cover with crop-residue mulch. Trials with a biodegradable film show that plastic pollution can be dealt with.

Description: The aim of the study was to determine the Actinobacteria structure in cultivated (C) versus non-cultivated (NC) soils divided into three groups (autogenic, hydrogenic, lithogenic) with consideration its formation process in order to assess the Actinobacteria sensitivity to agricultural soil use and soil genesis and to identify factors affecting their abundance. Sixteen C soil samples and sixteen NC samples serving as controls were taken for the study. Next generation sequencing (NGS) of the 16S rRNA metagenomic amplicons (Ion Torrent™ technology) and Denaturing Gradient Gel Electrophoresis (DGGE) were applied for precise determination of biodiversity. Generally, greater abundance of Actinobacteria in the NC soils relative to the C soils was found. Moreover, it was indicated that the actinobacterial diversity depended on both the soil genesis and the land use; however, this effect directly depended on the particular family and genera. Two factors: redox potential (Eh) and total carbon (TC) seemed to had a significant effect on the diversity of Actinobacteria. More precisely, Actinobacteria from the NC soils displayed a greater affinity for each other and were clearly influenced by Eh, whilst those from the C soils were mostly influenced by TC.

Description: Adoption of no-till systems in Eastern Washington has been slow due to the difficulty of managing wheat (Triticum aestivum L.) straw residue and the unknown decomposition potential of cultivars. We hypothesize that by analyzing wheat straw with near-infrared spectroscopy (NIRS), calibration models can be developed to accurately predict fiber and chemical constituents of wheat, determining straw decomposition potential. Straw from a panel of 480 soft winter wheat cultivars adapted to the Pacific Northwest are analyzed for neutral detergent fiber (NDF), acid detergent fiber (ADF), acid detergent lignin (ADL), cellulose, hemicellulose, carbon (C), and nitrogen (N). Using modified partial least squares regression and cross validation techniques, specific environment and broad-based NIRS models are calibrated and predictive ability is validated. R2cal values from broad models are better than the specific models, and are 0.85 (NDF), 0.86 (ADF), 0.65 (ADL), 0.88 (cellulose), 0.42 (hemicellulose), 0.67 (C), and 0.73 (N). The corresponding SEP values are 1.68% (NDF), 1.54% (ADF), 0.62% (ADL), 1.14% (cellulose), 1.11% (hemicellulose), 1.23% (C), and 0.06% (N). A Finch × Eltan breeding population is used to further validate models and prediction accuracies for variety selection within a breeding program scenario. The broad NIRS models prove useful for estimating high and low ranges of NDF, ADF, and cellulose in wheat cultivars which translate into characteristics of slow and fast decomposition potential.

Description: The inclusion of species with allelopathic activity in crop rotation systems may have benefits for crop management such as weed control, but less is understood about their wider impacts on succeeding crops. The main objective of this study was to investigate the effects of two allelopathic species (spearmint and peppermint) on growth, physiological characteristics, and yield of a following maize crop. Thus, field experiments were carried out at two sites, according to a randomized complete block design, while the examined treatments were: (a) fallow–fallow–maize crop rotation system (FFM), (b) spearmint–spearmint–maize crop rotation system (SSM), and (c) peppermint–peppermint–maize crop rotation system (PPM). Our results indicated that the inclusion of spearmint or peppermint in crop rotation systems negatively affect the growth of maize plants. The highest plant height was recorded for FFM rotation system where no allelopathic species were used. At both sites and for four sampling dates, the aboveground dry biomass was also affected by the implemented crop rotation system. In particular, dry biomass was significantly lower in the PPM and SSM crop rotation systems comparing to the FFM system, whereas there were no significant differences between these two crop rotation systems. Similar to the maize biomass, the highest values of photosynthetic rate, stomatal conductance, and relative chlorophyll content were observed for the FFM rotation system. Additionally, differences in grain yield were observed among the tested crop rotation systems. Grain yield ranged from 10,200 to 13,346 kg ha−1 and from 11,773 to 14,106 kg ha−1 at site A and B, respectively, while it was reduced by 16.54–23.58% and 12.16–17.83% in the SSP and PPM rotation systems comparing to the FFM system. In conclusion, our results indicate that the inclusion of peppermint or spearmint in crop rotation may inhibit plant growth and reduce grain yield of maize as successive crop, an effect that could be attributed to the allelopathic activity of spearmint and peppermint.

Description: The Midwestern U.S. landscape is one of the most highly altered and intensively managed ecosystems in the country. The predominant crops grown are maize (Zea mays L.) and soybean [Glycine max (L.) Merr]. They are typically grown as monocrops in a simple yearly rotation or with multiple years of maize (2 to 3) followed by a single year of soybean. This system is highly productive because the crops and management systems have been well adapted to the regional growing conditions through substantial public and private investment. Furthermore, markets and supporting infrastructure are highly developed for both crops. As maize and soybean production have intensified, a number of concerns have arisen due to the unintended environmental impacts on the ecosystem. Many areas across the Midwest are experiencing negative impacts on water quality, soil degradation, and increased flood risk due to changes in regional hydrology. The water quality impacts extend even further downstream. We propose the development of an innovative system for growing maize and soybean with perennial groundcover to recover ecosystem services historically provided naturally by predominantly perennial native plant communities. Reincorporating perennial plants into annual cropping systems has the potential of restoring ecosystem services without negatively impacting grain crop production and offers the prospect of increasing grain crop productivity through improving the biological functioning of the system.

Description: Rice blast is a serious fungal disease of rice (Oryza sativa L.) that is threatening global food security. It has been extensively studied due to the importance of rice production and consumption, and because of its vast distribution and destructiveness across the world. Rice blast, caused by Pyricularia oryzae Cavara 1892 (A), can infect aboveground tissues of rice plants at any growth stage and cause total crop failure. The pathogen produces lesions on leaves (leaf blast), leaf collars (collar blast), culms, culm nodes, panicle neck nodes (neck rot), and panicles (panicle blast), which vary in color and shape depending on varietal resistance, environmental conditions, and age. Understanding how rice blast is affected by environmental conditions at the cellular and genetic level will provide critical insight into incidence of the disease in future climates for effective decision-making and management. Integrative strategies are required for successful control of rice blast, including chemical use, biocontrol, selection of advanced breeding lines and cultivars with resistance genes, investigating genetic diversity and virulence of the pathogen, forecasting and mapping distribution of the disease and pathogen races, and examining the role of wild rice and weeds in rice blast epidemics. These tactics should be integrated with agronomic practices including the removal of crop residues to decrease pathogen survival, crop and land rotations, avoiding broadcast planting and double cropping, water management, and removal of yield-limiting factors for rice production. Such an approach, where chemical use is based on crop injury and estimated yield and economic losses, is fundamental for the sustainable control of rice blast to improve rice production for global food security.

Description: A study was conducted in an irrigated arid agroecosystem in southwestern USA, to compare two conservation tillage systems (strip tillage (ST) and no-tillage (NT)) to conventional, plow-based tillage (PT) system. Corn silage (Zea mays L.) was planted in this trial. Growth parameters (plant population and height) of corn silage were measured during the season and yield was evaluated at harvest. Soil physical measurements assessed included mean weight diameter of dry aggregates, wet aggregate stability, and penetrometer resistance. While soil biological measurements included total microbial biomass, diversity index (DI), total bacteria biomass, total fungi biomass (TFB), arbuscular mycorrhizae fungi (AMF), and total saprophytes. Results showed that plant population and silage yield at 65% moisture content were not significant with tillage during both trial years. Soil physical parameters were mostly not significant with tillage, while three out of the six biological measurements (DI, TF, and AM) were significant with tillage at p ≤ 0.05. No-tillage had higher DI and TFB than the ST, but not different from PT, while AMF was significantly higher in PT than ST, but not different from NT. The study demonstrates that farmers in the study region can adopt conservation tillage without yield losses during the early years of transition.

Description: The frequency of drought periods influences the yield potential of crops under field conditions. The change in morphology and anatomy of plants has been tested during drought stress under controlled conditions but the change in physiological processes has not been adequately studied in separate studies but needs to be reviewed collectively. This review presents the responses of green peas, snap beans, tomatoes and sweet corn to water stress based on their stomatal behaviour, canopy temperature, chlorophyll fluorescence and the chlorophyll content of leaves. These stress markers can be used for screening the drought tolerance of genotypes, the irrigation schedules or prediction of yield.

Description: A combination of organic and conservation approaches have not been widely tested, neither considering agronomic implications nor the impacts on the environment. Focussing on the effect of agricultural practices on greenhouse gas (GHG) emissions from soil, the hypothesis of this research is that the organic conservation system (ORG+) may reduce emissions of N2O, CH4 and CO2 from soil, compared to an integrated farming system (INT) and an organic (ORG) system in a two-year irrigated vegetable crop rotation set up in 2014, in a Mediterranean environment. The crop rotation included: Savoy cabbage (Brassica oleracea var. sabauda L. cv. Famosa), spring lettuce (Lactuca sativa L. cv. Justine), fennel (Foeniculum vulgare Mill. cv. Montebianco) and summer lettuce (L. sativa cv. Ballerina). Fluxes from soil of N2O, CH4 and CO2 were measured from October 2014 to July 2016 with the flow-through non-steady state chamber technique using a mobile instrument equipped with high precision analysers. Both cumulative and daily N2O emissions were mainly lower in ORG+ than in INT and ORG. All the cropping systems acted as a sink of CH4, with no significant differences among treatments. The ORG and ORG+ systems accounted for higher cumulative and daily CO2 emissions than INT, maybe due to the stimulating effect on soil respiration of organic material (fertilizers/plant biomass) supplied in ORG and ORG+. Overall, the integration of conservation and organic agriculture showed a tendency for higher CO2 emissions and lower N2O emissions than the other treatments, without any clear results on its potential for mitigating GHG emissions from soil.

Description: Climate change is viewed as a cause in accelerating the rate of invasion by alien species in addition to the globalization of anthropogenic activities. Ecological niche modeling has become an instrument in predicting invasion from natural or invaded ranges to uninvaded ranges based on the presence records of organisms and environmental parameters. This study explored the changes in the distributions of globally noxious alien species (Aegratina adenophora, Ageratum conyzoides, Chromolaena odorata, Lantana camara, Mikania micrantha, and Parthenium hysterophorus) in Bhutan, to provide evidence that even a mountain environment is under the threat of invasion given the change in climatic conditions. With fairly high accuracy, the model results suggest that there will be a potential increase in the areas of invasion among most of the species, except Parthenium hysterophorus, which will experience a northerly shift and decline in distribution. The results also indicate changes in patterns of invasion, some becoming more concentrated toward a given direction, while others become more dispersed over time. This study provides a framework that can be used in the strategic control of the species, future detection surveys, and further research.

Description: Phenolic compounds in basil (Ocimum basilicum) plants grown under a controlled environment are reduced due to the absence of ultraviolet (UV) radiation and low photosynthetic photon flux density (PPFD). To characterize the optimal UV-B radiation dose and PPFD for enhancing the synthesis of phenolic compounds in basil plants without yield reduction, green and purple basil plants grown at two PPFDs, 160 and 224 μmol·m−2·s−1, were treated with five UV-B radiation doses including control, 1 h·d−1 for 2 days, 2 h·d−1 for 2 days, 1 h·d−1 for 5 days, and 2 h·d−1 for 5 days. Supplemental UV-B radiation suppressed plant growth and resulted in reduced plant yield, while high PPFD increased plant yield. Shoot fresh weight in green and purple basil plants was 12%–51% and 6%–44% lower, respectively, after UV-B treatments compared to control. Concentrations of anthocyanin, phenolics, and flavonoids in green basil leaves increased under all UV-B treatments by 9%–18%, 28%–126%, and 80%–169%, respectively, and the increase was greater under low PPFD compared to high PPFD. In purple basil plants, concentrations of phenolics and flavonoids increased after 2 h·d−1 UV-B treatments. Among all treatments, 1 h·d−1 for 2 days UV-B radiation under PPFD of 224 μmol·m−2·s−1 was the optimal condition for green basil production under a controlled environment.

Description: Auxin regulates diverse aspects of growth and development. Furthermore, polar auxin transport, which is mediated by the PIN-FORMED (PIN) and AUXIN1/LIKE-AUX (AUX/LAX) proteins, plays a crucial role in auxin distribution. In this study, six PIN and four AUX/LAX genes were identified in ramie (Boehmeria nivea L.). We used qRT-PCR to characterize and analyze the two gene families, including phylogenetic relationships, intron/exon structures, cis-elements, subcellular localization, and the expression patterns in different tissues. The expression of these genes in response to indole-3-acetic acid (IAA) treatment and drought stress was also assessed; the results indicate that most of the BnAUX/LAX and BnPIN genes were regulated as a result of IAA treatment and drought stress. Our study provides insights into ramie auxin transporters and lays the foundation for further analysis of their biological functions in ramie fiber development and adaptation to environmental stresses.

Description: The genetic architecture and the genetic loci controlling commodity traits in this Hami melon have not been characterized. Multiplexed shotgun genotyping (MSG) was used to genotype an F2 population of 370 Chinese Hami melon progeny. A total of 47,609 single nucleotide polymorphism (SNP) markers were obtained after strict filtering. Thebins were used to construct a genetic linkage map with a total length of 1572.954 cM. Quantitative trait locus (QTL) analysis revealed that fruit color was controlled by one major gene about 2 Mb region on chr09, while exocarp color (EC) was controlled by one major gene about 1.9 Mb on chr04, and skin spotting was controlled by two dominant genes, one in the same region of chr04as the EC QTL and the other in the 1031.05 kb region on chr02. Two major QTLs on chr03 and chr05 were related pleiotropically to several quantitative fruit traits, namely, edge sugar content (ES), center sugar content (CS), fruit weight (FW), and fruit length (FL). A further QTL on chr09 also influenced ES, while five other QTLs affected FL. This study was the first to conduct genetic architecture analysis and QTL mapping in Chinese Hami melon with high-density markers and a large target population.

Description: Warm-season turfgrass species prevail in tropical and subtropical areas, but can also be grown in the transition zone. In this case, cold tolerance is a key aspect for germination and successful turfgrass establishment. The germination response to sub-optimal temperatures was investigated for Cynodon dactylon (cvs Jackpot, La Paloma, Transcontinental, Yukon, Riviera), Buchloe dactyloides (cv SWI 2000) and Paspalum vaginatum (cv Pure Dynasty). Four temperature regimes were applied, i.e., 20/30 °C, 15/25 °C, 10/20 °C and 5/15 °C, with a 12:12 h (light:dark) photoperiod. Germination assays were performed twice, with six replicates (Petri dishes) per treatment in each experiment, fifty seeds per dish. The final germinated percentages at last inspection time (FGP) were obtained for each Petri dish and processed by using a generalized linear mixed model (binomial error and logit link). Germination curves were fitted to each Petri dish by using time-to-event methods and germination rates (GR) for the 10th, 20th and 30th percentiles were derived and used to fit a linear thermal-time model. For all cultivars, FGP decreased with decreasing mean daily temperatures. Base temperatures (Tb) ranged between 11.4 °C and 17.0 °C, while the thermal time to obtain 30% germination ranged from 51.3 °C day for SWI 2000 to 144.0 °C day for Pure Dynasty. The estimated parameters were used to predict germination time in the field, considering the observed soil temperatures in Legnaro. The estimated date for the beginning of germination in the field would range from early April for SWI 2000 and Transcontinental to mid-May for Riviera. These results might be used as a practical support for planning spring sowing, which is crucial for successful turfgrass establishment, especially without irrigation.

Description: Terminal drought greatly enhanced Aspergillus flavus Link infection (AI) and aflatoxin contamination (AC) in peanut. Identification of new surrogate traits which have an association with AC may be effective to improve peanut varieties with reduced AI and AC. The objective of this work was to examine the relationships of nutrient uptake and N2-fixation (NF) with AC in peanut in a terminal drought condition. Five peanut varieties were tested in well-watered (WW) and terminal drought (TD) conditions (1/3 available water (AW) from R7 (7th reproductive growth stage; beginning of pod maturity stage)). Data were collected for nutrient uptake (nitrogen, phosphorus, potassium, calcium, magnesium), nodule dry weight (NDW), and NF. AI and AC were also examined. Nutrient uptake, NDW, and NF had negative and significant correlations with AI and AC in the TD condition. Negative and significant correlations of the drought tolerance index of nutrient uptake, NDW, and NF with AI and AC were also observed in the TD condition. The results showed that the ability to maintain nutrient uptake and NF in TD might be a mechanism of tolerance to AI and AC. Moreover, due to their negative impacts on AI and AC, nutrient uptake and NF could be used as selection traits for resistance to AI and AC in peanut in TD.

Description: Red rice (O. sativa) is one the most prevalent and damaging weed problems in direct seeding rice systems worldwide and can cause significant losses in rice productivity and quality. Red rice has been a problem in the United States for decades, and it is a growing problem in Asia, where 90 percent of the global rice production occurs. Unlike for other crops, where genetically engineered (GE) herbicide tolerant varieties are available, to date, Clearfield (CL) and Provisia rice are the only technologies available to selectively control red rice using chemical herbicides in commercial rice fields. We develop a counterfactual scenario without CL rice and ascertain the yield and quality losses due to red rice infestation in the Mid-South of the United States. Our findings suggest that even with the higher costs of CL rice, relative to non-CL rice, that the returns are $0.15, $0.36, and $0.54 more for every dollar invested than non-CL rice with a light, moderate, and heavy initial red rice infestation rate, respectively. These results imply that the higher upfront costs for CL rice are offset by more than proportional higher profits relative to their non-CL rice counterparts.

Description: According to the assumptions of Organisation for Economic Co-operation and Development OECD, the share of biofuels in the global transport sector is estimated to reach 15–23% by 2050. The triticale can be used to produce bioethanol. The appropriate production process should generate as much renewable energy as possible per production unit. Plant production can be carried out in various tillage systems and using appropriate doses of nitrogen fertilization. The objective of this study is to compare the effect of traditional tillage system (TRD) and reduced (RED) tillage technology and nitrogen fertilizer (0, 40, 80, 120 kg N ha−1) on grain and bioethanol yield of spring triticale. The field experiment was performed in the south east of Poland (50°42′ N, 23°15′ E) on medium dystrophic typical brown soil. Based on research and calculations, the TRD system and between 40 and 80 kg ha−1 of N fertilizer are recommended for use in the cultivation of triticale for bioethanol production purposes. Such a variant will ensure a sufficient yield of grain (5.190 and 5.803 t ha−1), starch (3.462 and 3.871 t ha−1) and bioethanol (2487.3 and 2780.7 L ha−1) and good agronomic efficiency of N fertilizer (16.96 and 12.15 L of bioethanol per 1 kg of nitrogen (N) applied). The best ratio of energy efficiency of bioethanol production (EROI—Energy Return on (Energy) Investment or “net energy”) was recorded for the TRD system (1.138:1) and for the N fertilizer at 40 kg N ha−1 (1.144:1).

Description: Tamarix spp. are ecological threats in the Southwest U.S.A. because they displace native vegetation, increase soil salinity, and negatively affect soil microbial communities. After Tamarix L. removal, legacy effects often necessitate restoration to improve ecosystem services of Tamarix-impacted communities. Commercial mycorrhizae fungal inoculation has been recommended to improve restoration success, although inoculation treatments are rarely tested on lesser-known facultative riparian species. Our study asked two questions: (1) Can a commercial mycorrhizal fungal inoculant increase native Baccharis salicifolia (Ruiz & Pav.) Pers. (mule-fat) performance against Tamarix chinensis Lour. (i.e., tamarisk) and is this influenced by tamarisk leaf litter? (2) Is mycorrhizal colonization of mule-fat roots influenced by tamarisk stem density and leaf litter? A greenhouse experiment was performed with mule-fat cuttings in soil collected from a tamarisk monoculture. Treatments were factorial combinations of tamarisk stem densities (0, 1, 2, 3, 4 stems pot−1) with or without mycorrhizal inoculation and tamarisk litter. There were five replications and two greenhouse runs. The total biomass of both species was determined and mule-fat arbuscular mycorrhizal colonization rates were determined via the magnified intersection method. Increasing tamarisk biomass negatively affected mule-fat biomass, but there were interactions with tamarisk biomass, litter and mycorrhizal inoculation, with litter and inoculation increasing mule-fat growth at high tamarisk biomass. Arbuscular mycorrhizal colonization was high in all treatments, yet at higher tamarisk stem densities, inoculation and litter improved colonization. Interestingly, litter did not negatively impact mule-fat as predicted. Moreover, litter and mycorrhizal inoculum interacted with tamarisk to improve mule-fat growth at higher tamarisk biomass, suggesting an opportunity to improve restoration success when in competition with tamarisk.

Description: The productivity of maize in Ethiopia has remained lower than the world average because of several biotic and abiotic factors. Stemborers and poor soil fertility are among the main factors that contribute to this poor maize productivity. A novel cropping strategy, such as the use of push-pull technology, is one of the methods known to solve both challenges at once. A push-pull technology targeting the management of maize stemborers was implemented in the Hawassa district of Ethiopia with the ultimate goal of increased food security among smallholder farmers. This study evaluated farmers’ perception of push-pull technology based on their experiences and observations of the demonstration plots that were established on-farm in Dore Bafano, Jara Gelelcha and Lebu Koremo village of the Hawasa district in 2016 and 2017. This study examined farmers’ perception of the importance of push-pull technology in controlling stemborers and improving soil fertility and access to livestock feed. In both cropping seasons, except for Jara Gelelcha, the maize grain yields were significantly higher in the climate-adapted push-pull plots compared to the maize monocrop plots. The majority (89%) of push-pull technology-practising farmers rated the technology better than their maize production methods on attributes such as access to new livestock feed and the control of stemborer damage. As a result, approximately 96% of the interviewed farmers were interested in adopting the technology starting in the upcoming crop season. Awareness through training and effective dissemination strategies should be strengthened among stakeholders and policymakers for the sustainable use and scaling-up of push-pull technology.

Description: Use of saline water for irrigation is essential to mitigate increasing agricultural water demands in arid and semi-arid regions. The objective of this study is to address the potential of using straw biochar as a soil amendment to promote wheat production under saline water irrigation. A field experiment was conducted in a clay loam soil from eastern China during 2016/2017 and 2017/2018 winter wheat season. There were five treatments: freshwater irrigation (0.3 dS m−1), saline water irrigation (10 dS m−1), saline water irrigation (10 dS m−1) combined with biochar of 10, 20, 30 t ha−1. Saline water irrigation alone caused soil salinization and decreased wheat growth and yield. The incorporation of biochar decreased soil bulk density by 5.5%–11.6% and increased permeability by 35.4%–49.5%, and improved soil nutrient status. Biochar also reduced soil sodium adsorption ratio by 25.7%–32.6% under saline water irrigation. Furthermore, biochar alleviated salt stress by maintaining higher leaf relative water content and lower Na+/K+ ratio, and further enhanced photosynthesis and relieved leaf senescence during reproductive stages, leading to better grain formation. Compared to saline water irrigation alone, biochar application of 10 and 20 t ha−1 significantly increased wheat grain yield by 8.6 and 8.4%, respectively. High dose of biochar might increase soil salinity and limit N availability. In the study, biochar amendment at 10 t ha−1 would be a proper practice at least over two years to facilitate saline water irrigation for wheat production. Long-term studies are recommended to advance the understanding of the sustainable use of straw biochar.

Description: Chokeberry (Aronia melanocarpa L.) contains a large number of bioactive compounds, which make of it a highly nutritional and antioxidant food with anti-cancer and anti-inflammatory properties. It has been recently seen its consumption increased because of its interesting composition and properties as a functional food. The ultrasound-assisted extraction method has been optimized, since it is a simple and fast technique to extract phenolic compounds, as well as anthocyanins, not only separately but also simultaneously. Multiple response has been optimized and demonstrated an effectiveness level similar to the individual ones. This represents a considerable reduction in costs, time and work. The optimal conditions for simultaneous extractions were: 54% methanol as extraction solvent at pH 2.72 and 69.4 °C temperature, 70% amplitude, 0.7 s cycle, and 0.5:18.2 g:mL sample mass/solvent volume ratio. The developed methods showed a high precision level with coefficients of variation lower than 5%. The methods were successfully applied to commercial samples. Additionally, the extraction of other compounds of biological interest, such as organic acids and sugars, was also studied.

Description: In Chile, durum wheat is cultivated in high-yielding Mediterranean environments, therefore breeding programs have selected cultivars with high yield potential in addition to grain quality. The genetic progress in grain yield (GY) between 1964 and 2010 was 72.8 kg ha−1 per year. GY showed a positive and significant correlation with days to heading, kernels per unit ground area and thousand kernel weight. The gluten and protein content tended to decrease with the year of cultivar release. The correlation between the δ13C of kernels and GY was negative and significant (−0.62, p 〈 0.05, for all cultivars; and −0.97, p 〈 0.001, excluding the two oldest cultivars). The yield progress (genetic plus agronomic improvements) of a set of 40–46 advanced lines evaluated between 2006 and 2015 was 569 kg ha−1 per year. Unlike other Mediterranean agro-environments, a longer growing cycle together with taller plants seems to be related to the increase in the GY of Chilean durum wheat during recent decades.

Description: Optimal manure management can maximize agronomic benefits and minimize environmental impacts. Field experiments were conducted in the Pacific Northwest (Vancouver, Canada) to determine how chicken and horse manures that were fall-applied to meet nitrogen crop demand affect soil ammonium (NH4+) and nitrate (NO3−), apparent net mineralization (ANM) and nitrification (ANN), crop biomass and nutrient concentration, and fluxes of nitrous oxide (N2O), carbon dioxide (CO2), and methane (CH4). Relative to horse manure, chicken manure increased soil NH4+ by 60-fold, ANM by 2-fold, and ANN by 4-fold. Emissions of N2O (+600%) and CO2 (+45%) were greater and growing season CO2 emissions (−40%) were lower after application of chicken than horse manure. Productivity of cover crop (+30%), legume cover crop (−25%), and squash cash crop (+20%) were affected by chicken relative to horse manure. Overall, fall-applied chicken manure increased yields, N availability, and environmental impacts relative to horse manure.

Description: The burdens of malnutrition, protein and micronutrient deficiency, and obesity cause enormous costs to society. Crop nutritional quality has been compromised by the emphasis on edible yield and through the loss of biodiversity due to the introduction of high-yielding, uniform cultivars. Heirloom crop cultivars are traditional cultivars that have been grown for a long time (〉50 years), and that have a heritage that has been preserved by regional, ethnic, or family groups. Heirlooms are recognized for their unique appearance, names, uses, and historical significance. They are gaining in popularity because of their unique flavors and cultural significance to local cuisine, and their role in sustainable food production for small-scale farmers. As a contrast to modern cultivars, heirlooms may offer a welcome alternative in certain markets. Recently, market channels have emerged for heirloom cultivars in the form of farmer–breeder–chef collaborations and seed-saver organizations. There is therefore an urgent need to know more about the traits available in heirloom cultivars, particularly for productivity, stress tolerance, proximate composition, sensory quality, and flavor. This information is scattered, and the intention of this review is to document some of the unique characteristics of heirloom cultivars that may be channeled into breeding programs for developing locally adapted, high-value cultivars.

Description: Acid soils and associated Al3+ toxicity are prevalent in Ethiopia where normally Al3+-sensitive durum wheat (Triticum turgidum ssp durum Desf.) is an important crop. To identify a source of Al3+ tolerance, we screened diverse Ethiopian durum germplasm. As a center of diversity for durum wheat coupled with the strong selection pressure imposed by extensive acid soils, it was conceivable that Al3+ tolerance had evolved in Ethiopian germplasm. We used a rapid method on seedlings to rate Al3+ tolerance according to the length of seminal roots. From 595 accessions screened using the rapid method, we identified 21 tolerant, 180 intermediate, and 394 sensitive accessions. When assessed in the field the accessions had tolerance rankings consistent with the rapid screen. However, a molecular marker specific for the D-genome showed that all accessions rated as Al3+-tolerant or of intermediate tolerance were hexaploid wheat (Triticum aestivum L.) that had contaminated the durum grain stocks. The absence of Al3+ tolerance in durum has implications for how Al3+ tolerance evolved in bread wheat. There remains a need for a source of Al3+-tolerance genes for durum wheat and previous work that introgressed genes from bread wheat into durum wheat is discussed as a potential source for enhancing the Al3+ tolerance of durum germplasm.

Description: The availability of big data in agriculture, enhanced by free remote sensing data and on-board sensor-based data, provides an opportunity to understand within-field and year-to-year variability and promote precision farming practices for site-specific management. This paper explores the performance in durum wheat yield estimation using different technologies and data processing methods. A state-of-the-art data cleaning technique has been applied to data from a yield monitoring system, giving a good agreement between yield monitoring data and hand sampled data. The potential use of Sentinel-2 and Landsat-8 images in precision agriculture for within-field production variability is then assessed, and the optimal time for remote sensing to relate to durum wheat yield is also explored. Comparison of the Normalized Difference Vegetation Index(NDVI) with yield monitoring data reveals significant and highly positive linear relationships (r ranging from 0.54 to 0.74) explaining most within-field variability for all the images acquired between March and April. Remote sensing data analyzed with these methods could be used to assess durum wheat yield and above all to depict spatial variability in order to adopt site-specific management and improve productivity, save time and provide a potential alternative to traditional farming practices.

Description: Kura clover living mulch (KCLM) systems have been previously investigated for their incorporation into upper Midwestern row crop rotations to provide ecosystem services through continuous living cover. Reductions in soil erosion and nitrate loss to surface and groundwater have been reported, but factors affecting agronomic performance and nutrient management are not well defined. To achieve realized environmental benefits, research must develop agronomic management techniques, determine economic opportunities, and provide management recommendations for row crop production in KCLM systems. Two experiments were conducted in 2017 and 2018 to determine the response to N fertilizer application for maize production in KCLM. The first-year maize experiment followed forage management, and the second-year maize experiment followed maize after forage management. Eight fertilizer N treatments ranging from 0–250 kg N ha−1 were applied to each experiment and grain and stover yields were compared to conventionally managed maize hybrid trials that were conducted nearby. First-year maize did not need fertilizer N to maximize yield and profitability in either growing season, and second-year maize required a fertilizer N rate near local University guidelines for maize following soybean. The net economic return from maize grain and stover in the KCLM averaged over first and second-year maize experiments and 2017 and 2018 growing seasons were $138 ha−1 greater than the conventional comparison.

Description: The agricultural area in the Po Valley is prone to high nitrous oxide (N2O) emissions as it is characterized by irrigated maize-based cropping systems, high amounts of nitrogen supplied, and elevated air temperature in summer. Here, two monitoring campaigns were carried out in maize fertilized with raw digestate in a randomized block design in 2016 and 2017 to test the effectiveness of the 3, 4 DMPP inhibitor Vizura® on reducing N2O-N emissions. Digestate was injected into 0.15 m soil depth at side-dressing (2016) and before sowing (2017). Non-steady state chambers were used to collect N2O-N air samples under zero N fertilization (N0), digestate (D), and digestate + Vizura® (V). Overall, emissions were significantly higher in the D treatment than in the V treatment in both 2016 and 2017. The emission factor (EF, %) of V was two and four times lower than the EF in D in 2016 and 2017, respectively. Peaks of NO3-N generally resulted in N2O-N emissions peaks, especially during rainfall or irrigation events. The water-filled pore space (WFPS, %) did not differ between treatments and was generally below 60%, suggesting that N2O-N emissions were mainly due to nitrification rather than denitrification.

Description: Although compost and biochar received high attention as growing media, little information is available on the potential of vineyard by-products for the production and use of composted solid digestate (CSD) and biochar (BC). In the present study, two experiments are reported on CSD and BC mixed with commercial peat (CP) for grapevine planting material production. Four doses (0, 10%, 20%, 40% vol.) of CSD and BC were assessed in the first and second experiment, respectively. CSD mixed at a dose of 10% recorded the highest values of shoot dry weight (SDW) and a fraction of total dry biomass allocated to shoot (FTS), both cropping bench-graft and bare-rooted vine. On the other hand, CSD mixed at a dose of 40% displayed the highest values of SDW and FTS, cropping two-year-old vine. BC used at a dose of 10% improved SDW, root dry weight, total dry weight, FTS, shoot diameter, and height on bare-rooted vine. The present study shows that CSD and BC, coming from the valorization of vineyard by-products, can be used in the production of innovative growing media suitable for nursery grapevine production. Further studies are needed to assess the combined applications of CSD and BC in the same growing media.

Description: The application of nitrification inhibitors (NIs) shows promise in prolonging the ammonium presence in soil with beneficial effects for agriculture ecosystems and climate change mitigation. Although the inhibitory effect (IE) of NIs has been studied in the presence of various environmental and edaphic conditions, little is known about the effect of soil nitrification potential (NP) on the effectiveness of NIs. Here, laboratory-scale experiments were conducted to investigate the effect of the variation in soil NP rates, among land-use type and temperature, on the performance of two nitrification inhibitors, dicyandiamide (DCD) and 3,4-dimethypyrazole phosphate (DMPP), at four NI application rates imposed upon eight cropland and non-cropland soils. We found that the IE of DCD and DMPP were organized according to soil NP rates. Nevertheless, NP was lower in non-cropped soil than in cropped systems, and DMPP-based inhibition was higher than DCD. The IE of both NIs decreased with NP and the amount of NI required to achieve an IE ≈ 50%, was significantly reduced for soils that exhibited the lowest NP rates, especially for DMPP. However, the temperature did not appear to have a major influence on IE of both DCD and DMPP, demonstrating the potential of NIs to inhibit nitrification for a wider temperature range, dependent on the NI application rate. Our findings provide evidence that change in soil NP rate has important influences on the efficacy of NI which required great consideration for N-fertilizer optimization with the application of nitrification inhibitors.

Description: This study investigated the influence of biological control agents and plant growth promoters on the chemical composition of the cultivars Panda and Kora buckwheat sprouts. Before sowing, seeds were soaked in solutions containing Bacillus subtilis bacteria, Pythium oligandrum oospores, Ecklonia maxima algae extract, and/or nitrophenols. The sprouts of the Panda displayed higher levels of protein, fat, and dietary fiber fractions than the Kora. Measurable effects of biological control agents (BCAs) and plant growth promoters (PGPs) on the chemical composition of sprouts were also confirmed. Soaking the seeds in a solution containing P. oligandrum oospores resulted in a decrease in the level of crude ash in sprouts, while the addition of nitrophenols increased the level of both crude ash and protein. We also found statistically significant effects of interactions between the cultivar and BCA and/or PGP for each of the examined components.

Description: During biogas production anaerobic digestion of plant material produces a nutrient-rich residue called digestate. The application of the nutrients present in the digestate should improve soil fertility, particularly in nutrient poor soils, and thus crop yield, promoting the closure of the nutrient cycle. This study evaluated the effect of digestate application on the germination and early stages of plant development since these are the first steps to be considered when studying the benefits on plant growth in low fertility substrates. A greenhouse experiment was conducted to evaluate the effects of three substrates of different texture and fertility (field loam, field sand, sand), as well as type and amount of fertilizer (pure maize digestate vs. inorganic nitrogen/phosphorus/potassium (NPK) fertilizer) on both germination and early plant performance of maize (Zea mays L. subsp. mays). While digestate and NPK fertilizer applications had no significant effect on germination in the two field soils, digestate applications significantly decreased the germination rate in sand (36–82% reduction) due to an increase of surface water repellency. In contrast, for aboveground biomass yield, the most positive fertilization effects of digestate application were found on sand (up to 3.5 times the biomass of the unamended control) followed by field sand (1.5 times), compared to no effect for field loam. Our findings suggest that digestate application have positive fertilization effects in low-fertility substrates, similar to NPK, even though digestate application may have a negative impact on the permeability in sandy substrates that could interfere with germination.

Description: Citrus bacterial canker (CBC), caused by the plant pathogenic bacterium Xanthomonas citri subsp. citri (Xcc), is a devastating disease in many commercial citrus cultivars. Every year, CBC causes a substantial reduction in fruit quality and quantity that corresponds to significant economic losses worldwide. Endophytic microorganisms produce numerous bioactive secondary metabolites that can control plant pathogens. We investigated the antagonistic activities of 66 endophytic bacteria isolated from nine citrus cultivars to control streptomycin-resistant Xcc. The suspension of Endophytic Bacteria-39 (EB-39), identified as Bacillus velezensis, exhibited the highest antibacterial activity against three wild-type and six streptomycin-resistant Xcc strains, with the inhibition zones between 39.47 ± 1.6 and 45.31 ± 1.6 mm. The ethyl acetate extract of EB-39 also controlled both wild-type and streptomycin-resistant Xcc strains, with the inhibition zones between 29.28 ± 0.6 and 33.88 ± 1.3 mm. Scanning electron microscopy indicated the ethyl acetate extract of EB-39-induced membrane damage and lysis. The experiments using the detached leaves of a susceptible Citrus species showed that EB-39 significantly reduced the incidence of canker on the infected leaves by 38%. These results strongly suggest that our newly isolated EB-39 is a novel biocontrol agent against CBC caused by wild-type and streptomycin-resistant Xcc strains.

Description: Although arbuscular mycorrhizal (AM) fungi are known to promote growth and yield of agricultural crops, inoculation methods for effective scaling up from greenhouse to the field are still underexplored. The application of single or mixed beneficial AM fungal isolates is hindered by the lack of experimental reproducibility of findings at different scales and the cost-effectivity of inoculation methods. Seed coating has been considered a feasible delivery system of AM fungal inocula for agricultural crops. In this study, the impact of single and multiple AM fungal isolates applied via seed coating on chickpea productivity was evaluated under greenhouse and field conditions. Overall, plants inoculated with multiple AM fungal isolates had better performance than those inoculated with single AM isolate under greenhouse and field conditions. While plants in greenhouse displayed higher shoot dry weight (14%) and seed individual weight (21%), in field, inoculation with multiple AM isolates increased pod (160%), and seed (148%) numbers, and grain yield (140%). Under field conditions, mycorrhizal root colonization was significantly higher in chickpea plants inoculated with multiple AM fungal isolates compared to other treatments. These findings highlight the potential of field-inoculation with multiple AM fungal isolates via seed coating as a sustainable agricultural practice for chickpea production.

Description: The rice production system in Japan is changing due to the aging of rice farmers, shortage of labor, mechanization, and increase of large-scale rice fields and increased application of direct sowing, all of which contribute to the lack of sophisticated weed management practices. Because the changing production system has not improved and likely worsened weed management practices, weedy rice (Oryza sativa L.) has become a serious threat to rice production in Japan. We analyzed weedy rice accessions from Nagano, the central part of Japan, and other rice accessions to elucidate the origin of this weedy rice using a whole-genome single nucleotide polymorphism (SNP) array. For developing sustainable weedy rice management practices, the elucidation of the origin of re-emerging weedy rice is crucial. Population genetic analysis indicated that weedy rice in Nagano was phylogenetically independent from the local red rice cultivar with low genetic diversity. Past and recently re-emerging weedy rice ecotypes in Nagano shared a similar genetic background which implies the evolution of weedy rice by severe natural selection. Window-based FST and selection sweep analysis revealed the divergence of some of the known key domestication-related genes, such as shattering gene sh4 and qsh1, of weedy rice from domesticated rice cultivars.

Description: Crop residues are an important source of plant nutrients. However, information on the various methods of residue management on micronutrients in soil and wheat (Triticum aestivum L.) over time is limited. A long-term (84-year) agroecosystem experiment was assessed to determine the impact of fertilizer type and methods of crop residue management on micronutrients over time under dryland winter wheat-fallow rotation. The treatments were: no N application with residue burning in fall (FB), spring (SB), and no residue burn (NB); 45 kg N ha−1 with SB and NB; 90 kg N ha−1 with SB and NB; pea vines; and farmyard manure (FYM) and a nearby undisturbed grass pasture (GP). Wheat grain, straw, and soil samples from 1995, 2005, and 2015 were used to determine tissue total and soil Mehlich III extractable Mn, Cu, B, Fe, and Zn, and soil pH. After 84 years, extractable Mn and B in the top 10 cm of soil decreased in all plots, except for B in FYM and SB. The FYM plots had the highest extractable Mn (114 mg kg−1) in the top 10 cm soil; however, it declined by 33% compared to the GP (171 mg kg−1). Extractable Zn in the top 10 cm of soil increased with FYM while it decreased with inorganic N application in 2015; however, total Zn in grain increased by 7% with inorganic N (90 kg ha−1) application compared to FYM application. The results suggest that residue management had similar impact on soil micronutrients. Inorganic N and FYM application can be integrated to reduce micronutrient losses from cultivation.

Description: The tropical multiuse tree Jatropha curcas L. (jatropha) is highly promoted as oilseed crop for biodiesel production and for climate change mitigation, but cultivation practices require further research. The objectives of this study were to assess the effects of varying plant spacings (2.0 m × 4 m compared to 1.5 m × 4 m), crop establishment methods (raising plantlets in a nursery prior to planting to the field compared to direct sowing) and genotypes on seed yield, seed quality and plant height, recorded at a dry-subhumid location in Madagascar (Ihosy) and at a humid location in Cameroon (Batchenga). Averaged across treatment variants and genotypes, seed yield and seed oil content were higher at the dry-subhumid site and in particular the narrower spacing reached higher seed yields per unit area than the wider spacing. At the humid site, plant growth was characterized by strong accumulation of biomass. The establishment method tested at the dry-subhumid site showed no significant differences in the recorded parameters. Our results encourage to re-think common practices in jatropha cultivation and underpin the importance of the correct choice of location, genotype and agronomic practices considering the interactions between all factors.

Description: In New Zealand, pastoral farming for dairy and meat production is the major land use. As with any agricultural production system, weeds are a threat to efficient pasture production in New Zealand. In this review, we outline the problems caused by weeds in New Zealand pastures, and the management strategies being used to control them. There are currently 245 plant species from 40 plant families that are considered to be troublesome weeds in New Zealand pastures. The application of herbicides is an important approach to manage weeds in New Zealand pastures; however, a key to the success of these pastures is the use of clovers in combination with the grasses, so the challenge is to find herbicides that selectively control weeds without damaging these legumes. The use of spot spraying and weed wiping are often required to ensure selective control of some weed species in these pastures. Non-chemical agronomic approaches such as grazing management and using competitive pasture species often play a more important role than herbicides for weed management in many New Zealand pastures. Thus, integrated weed management using a combination of herbicides and good pasture management strategies leads to the most cost-effective and efficient control of pasture weeds in New Zealand.

Description: The main aim of this study is to identify and investigate specific humates (Hs) as potential biostimulants. Five specialty lignosulfonates (LS1-5), one commercial leonardite-humate (PH), and one commercial lignosulfonate (LH), were analyzed for their carbon, nitrogen, and sulfur contents, and the distribution of functional groups using Fourier transform infrared (FTIR) and Raman spectroscopies. Hs were further supplied for two days to Zea mays L. in hydroponics to test their capacity to trigger changes in physiological target-responses. LS1, LS2, LS3, and LS5 determined the most pronounced effects on plant growth and accumulation of proteins and phenolics, perhaps because of their chemical and spectroscopic features. Root growth was more increased (+51–140%) than leaf growth (+5–35%). This effect was ascribed to higher stimulation of N metabolism in roots according to the increased activity of N-assimilation enzymes (GS and GOGAT) and high consumption of sugars for energy-dependent processes. Increased values of RuBisCO, SPAD (Soil Plant Analysis Development values), and leaf sugar accumulation refer to enhanced photosynthesis attributed to Hs. We conclude that Hs tested in this study functioned as biostimulants, but the specialty lignosulfonates were more efficient in this role, possibly because of the type of starting material and process used for their production, which may have influenced their chemical properties.

Description: Dutch bucket hydroponic trials were conducted with the aim to evaluate the effects of different hydroponic fertilizers (5N-4.8P-21.6K, 5N-5.2P-21.6K, and 7N-3.9P-4.1K) on growth, fruit production, and the fruit quality (fruit shape index) parameters of two cultivars of sweet pepper (Capsicum annuum L.) and on two cultivars of eggplant (Solanum melongena L.). For sweet pepper yield, the 5N-4.8P-21.6K fertilizer was responsible for the greatest yield for both cultivars. For sweet pepper fresh and dry shoot weight interaction, the ‘Orangella’ cultivar had greater growth in 5N-4.8P-21.6K and 5N-5.2P-21.6K fertilizers, whereas there was no difference among cultivars in 7N-3.9P-4.1K. Shape index was not affected by fertilizers or cultivars. For the eggplant yield, there was no main effect nor interaction between fertilizers and cultivars for fruit yield, while the interaction between fertilizers and cultivars was significant for shoot fresh weight production. Shoot fresh weight was greater for ‘Angela’ than ‘Jaylo’ in 5N-4.8P-21.6K and 7N-3.9P-4.1K. Furthermore, both eggplant cultivars were affected with yellowing of fruits in all fertilizer treatments after 2 months, which was probably due to the accumulation of nutrients in the closed hydroponic system. Therefore, hydroponic producers could select 5N-4.8P-21.6K and 5N-5.2P-21.6K fertilizers for the cultivation of the ‘Orangella’ cultivar of sweet pepper based on yield. It is important to evaluate more fertilizers and cultivars for eggplant hydroponic cultivation.

Description: In soybean production, the shade avoidance response can affect yield negatively in both mono- and inter-cropping systems due to increased heterogeneity of the crop and lodging. This is mainly regulated by photoreceptors responding to the ratio between red and far-red light (R:FR) and photosynthetic photon flux density (PPFD). In this study, three soybean cultivars were grown under different R:FR and PPFD in a light emitting diode (LED) climate chamber to disentangle the effect of each on morphology and dry matter. Results showed that plant organs were influenced differently and indicated an interaction with the increase in assimilates at high PPFD. Internode elongation was mainly influenced by low PPFD with an additive effect from low R:FR, whereas petiole elongation responded strongly under low R:FR. Hence, petiole elongation can be seen as the main response to the threat of shade (high PPFD and low R:FR) and both petiole and internode elongation as a response to true shade (low PPFD and low R:FR). Interactions between cultivar and light treatment were found for internode length and diameter and leaf mass ratio, which may be unique properties for specific cropping systems.

Description: Future climatic conditions might have severe effects on grapevine architecture, which will be highly relevant for vineyard management decisions on shoot positioning, pruning or cutting. This study was designed to help gaining insight into how, in particular, increasing temperatures might affect grapevine canopies. We developed a functional-structural model for Riesling, Virtual Riesling, based on digitised data of real plants and a comprehensive state-of-the-art data analysis. The model accounts for the variability in temperature-sensitive morphological processes, such as bud break and appearance rates. Our simulation study using historical weather data revealed significant effects of the thermal time course over the year on bud burst of the cane and on primary shoots. High variabilities in these events affect canopy growth and leaf area distribution. This report shows that Virtual Riesling can be useful in assessing the significance of changing temperatures for grapevine architecture and thereby considering management techniques such as vertical shoot positioning. Further developments of Virtual Riesling might support the knowledge gain for developing necessary adaptations in future vineyard management and, thus, facilitate future work on climate change research using functional-structural model approaches.

Description: Intermediate wheatgrass (IWG, Thinopyrum intermedium, (Host) Barkworth & D.R. Dewey subsp. intermedium, 2n = 6x = 42) is a novel perennial crop currently undergoing domestication efforts. It offers remarkable ecosystem services and yields higher relative to other perennial grain crops. While IWG is mostly resistant to Fusarium head blight (FHB), identifying genomic regions associated with resistance will help protect the crop from potential disease epidemics. An IWG biparental population of 108 individuals was developed by crossing parents differing in their response to FHB and bacterial leaf streak (BLS). The population was screened for disease reaction over three years using isolates collected from IWG plants in St. Paul, Minnesota, USA. Linkage maps representing the 21 IWG chromosomes were constructed from 4622 Single Nucleotide Polymorphism (SNP) markers, with one SNP at every 0.74 cM. Interval mapping identified 15 quantitative trait loci (QTL) associated with FHB resistance and 11 with BLS resistance. Models with two or three QTL combinations reduced FHB disease severity by up to 15%, and BLS by up to 17%. When markers associated with FHB resistance were used as cofactors in genomic selection models, trait predictive ability improved by 24–125%. These genomic regions and genetic markers associated with FHB and BLS resistance can also be used to safeguard annual cereal grains through gene introgression and selective breeding.

Description: Water status controls plant physiology and is key to managing vineyard grape quality and yield. Water status is usually estimated by leaf water potential (LWP), which is measured using a pressure chamber; however, this method is difficult, time-consuming, and error-prone. While traditional spectral methods based on leaf reflectance are faster and non-destructive, most are based on vegetation indices derived from satellite imagery (and so only take into account discrete bandwidths) and do not take full advantage of modern hyperspectral sensors that capture spectral reflectance for thousands of wavelengths. We used partial least squares regression (PLSR) to predict LWP from reflectance values (wavelength 350–2500 nm) captured with a field spectroradiometer. We first identified wavelength ranges that minimized regression error. We then tested several common data pre-processing methods to analyze the impact on PLSR prediction precision, finding that derivative pre-processing increased the determination coefficients of our models and reduced root mean squared error (RMSE). The models fitted with raw data obtained their best results at around 1450 nm, while the models with derivative pre-processed achieved their best estimates at 826 nm and 1520 nm.

Description: Low prices have prompted growers to contemplate transitioning to an organic system. We evaluated red clover-maize-soybean-wheat (Cl-M-S-W), maize-soybean (M-S-M-S), and soybean-wheat/red clover-maize-soybean (S-W/Cl-M-S) rotations in organic and conventional systems in New York, USA from 2015 to 2018 to identify profitable organic practices. Organic compared with conventional maize in 2017 had 14.6% higher yield and $2107/ha higher returns above selected costs in the S-W/Cl-M-S rotation; and had $1007/ha higher returns in the M-S-M-S rotation, despite 3.6% lower yield and higher production costs, because of the organic price premium. Likewise, organic compared with conventional soybean had ~$800 to ~$900/ha higher returns in 2017 and 2018, despite ~10% lower yield and ~$50/ha higher production costs, because of the organic price premium. Organic compared with conventional wheat yielded ~4% higher with $125/ha higher returns, despite ~$435/ha higher production costs. Organic compared with the conventional system had $1018/ha higher returns in the Cl-M-S-W rotation, $1782/ha higher in the M-S-M-S rotation, and $2961/ha higher in the S-W/Cl-M-S rotation in 2017 and 2018. Although returns in 2015 and 2016 (no organic premium) were lower, the organic compared with the conventional system from 2015 to 2018 had $673/ha higher returns in the Cl-M-S-W rotation, $497/ha higher in the M-S-M-S rotation, and $2355/ha higher in the S-W/Cl-M-S rotation indicating that the S-W/Cl-M-S rotation was the most profitable organic rotation during the four-year period.

Description: Cymbidium faberi Rolfe is a very popular potted plant in China, Japan and Korea where it has been cultivated for centuries. The economic value of this popular native Asian orchid could be enhanced by changes in its floral traits. In Arabidopsis, PISTILLATA (PI) is involved in regulating petal and stamen development. In order to investigate the possible role of the PI ortholog involved in floral development, we isolated CyfaPI from C. faberi. Protein alignment and a phylogenetic tree grouped CyfaPI in the PI lineage. CyfaPI transcripts were detected in all floral organs, but were absent in leaves. Moreover, in flowers, the highest expression level of CyfaPI was present in the gynostemium and the lowest level was found in anther caps. In addition, ectopic expression of CyfaPI in Arabidopsis pi-1 mutant rescued petal development, and complement the development of filament-like structure (part of stamen), but failed to complement anther development in the stamen whorl. All these finding suggest that CyfaPI is mainly responsible for perianth and gynostemium development in C. faberi. Our data may help to trace the development of the gynostemium program and evolution in orchids.

Description: This study was conducted to evaluate the effects of Bradyrhizobium japonicum SAY3-7, Bradyrhizobium elkanii BLY3-8, and Streptomyces griseoflavus P4 on the symbiotic effectiveness of soybeans before biofertiliser production, to produce biofertiliser containing the studied three strains (SAY3-7, BLY3-8, and P4), to test the effectiveness of the biofertiliser on soybean varieties, and to assess the varietal effects and interaction effects between variety and biofertiliser on plant growth, nodulation, nitrogen fixation, nutrient absorption, and seed yield. Nitrogen fixation was measured using the acetylene reduction assay and ureide methods. Contents of nutrients (N, P, K, Ca, and Mg) were also measured to calculate their uptakes. In this study, synergistic effects of nitrogen fixation were induced by combined inoculation with SAY3-7, BLY3-8 and P4 in all tested soybean varieties. Therefore, we assumed that an effective biofertiliser could be produced using these effective bacteria (SAY3-7, BLY3-8, and P4). After making biofertiliser using these effective bacteria, packages were stored at 30 °C. The populations of the bacteria in the biofertiliser were maintained at a density of 1 × 108 colony forming units (cfu) g−1 for P4 and 7 × 109 cells g−1 for Bradyrhizobium. Diluting biofertiliser by 10−3 proved more effective for nodulation and nitrogen fixation than other dilution treatments. Moreover, this biofertiliser significantly promoted plant growth, nodulation, nitrogen fixation, nutrient uptakes, and seed yield in Yezin-3 and Yezin-6 soybean varieties. Yezin-6 is a more efficient variety than Yezin-3 for improved plant growth, nodulation, nitrogen fixation, nutrient absorption, and seed yield. Taken together, the application of an effective biofertiliser and the use of an efficient soybean variety can play important roles in promoting plant growth, nodulation, nitrogen fixation, and higher seed yield.

Description: The Nutrient Use Efficiency in intensive agriculture is lower than 50% for macronutrients. This feature results in unsustainable financial and environmental costs. Nanofertilizers are a promising application of nanotechnology in agriculture. The use of nanofertilizers in an efficient and safe manner calls for knowledge about the actual effects of nanoproducts on the plant metabolism and eventually on the carrier release kinetics and nutrient accumulation. Hydroxyapatite (Ca10(PO4)6(OH)2) nanoparticles (nHA) have an interesting potential to be used as nanofertilizers. In this study, the effects of different nHA solutions stabilized with carboxymethylcellulose (CMC) were evaluated on germination, seedling growth, and metabolism of Solanum lycopersicum L., used as model species. Our observations showed that the percentage germination of S. lycopersicum is not influenced by increasing concentrations of nHa, while root elongation is strongly stimulated. Tomato plants grown in hydroponics in the presence of nHA have not suffered phytotoxic effects. We conclude that nHA had nontoxic effects on our model plant and therefore it could be used both as a P supplier and carrier of other elements and molecules.

Description: Forage plants underpin the livestock industry. Selective breeding, including polyploidization, where genome size is increased by whole genome duplication, changes the productivity and stress tolerance of new varieties. We conducted a growth chamber experiment to investigate the likely responses of Lolium perenne L. to drought, testing four diploid and four tetraploid varieties. We simulated projected spring and summer temperatures for the South-West of England in 2080, applying three projected rainfall scenarios, which varied in drought severity. Drought caused a reduction in productivity, but there was substantial variation between varieties (up to 82%), with the optimal variety changing depending on drought severity. Across three harvests, productivity declined by 43% and 27% (dry biomass) for the severe and likely drought scenarios, respectively. In the final harvest, tetraploids exhibited a greater biomass under severe drought, whereas diploids had a greater biomass under the current rainfall and likely drought scenarios. Longer stomata were observed in tetraploids; however, stomatal conductance was not significantly different between ploidy levels. Trait selection will be important for future drought adaptation. Local climate projections will need to be consulted when selecting L. perenne varieties to tolerate the spatially variable reductions in future rainfall.

Description: The effects of water stress on crop yield through modifications of plant architecture are vital to crop performance such as common bean plants. To assess the extent of this effect, an outdoor experiment was conducted in which common bean plants received five treatments: fully irrigated, and irrigation deficits of 30% and 50% applied in flowering or pod formation stages onwards. Evapotranspiration, number and length of pods, shoot biomass, grain yield and harvest index were assessed, and architectural traits (length and thickness of internodes, length of petioles and petiolules, length and width of leaflet blades and angles) were recorded and analyzed using regression models. The highest irrigation deficit in the flowering stage had the most pronounced effect on plant architecture. Stressed plants were shorter, leaves were smaller and pointing downward, indicating that plants permanently altered their exposure to sunlight. The combined effect of irrigation deficit and less exposure to light lead to shorter pods, less shoot biomass and lower grain yield. Fitted empirical models between water deficit and plant architecture can be included in architectural simulation models to quantify plant light interception under water stress, which, in turn, can supply crop models adding a second order of water stress effects on crop yield simulation.

Description: The PEBP family comprises proteins that function as key regulators of flowering time throughout the plant kingdom and they also regulate growth and plant architecture. Within the PEBP protein family, three subfamilies can be distinguished in angiosperms: MOTHER OF FT AND TFL1-like (MFT), FLOWERING LOCUS T-like (FT-like), and TERMINAL FLOWER1-like (TFL1-like). Taking advantage of the genome sequences available from K. fedtschenkoi and K. laxiflora, we performed computational analysis to identify the members of the PEBP gene family in these species. The analyses revealed the existence of 11 PEBP genes in K. fedtschenkoi and 18 in K. laxiflora, which are clustered in two clades: FT-like and TFL1-like. The PEBP genes had conserved gene structure and the proteins had highly conserved amino acid sequences in the positions crucial for the protein functions. The analysis of Ka/Ks ratio revealed that most recently duplicated genes are under positive selection. Despite being an economically important genus, the genetics underlying the regulation of flowering in Kalanchoë is poorly understood. The results of this study may provide a new insight into the molecular control of flowering that will allow further studies on flowering control in Kalanchoë.

Description: Lippia graveolens, commonly known as Mexican oregano, is an aromatic plant of great industrial, nutritional, and medicinal value, principally for its essential oils. Regeneration via axillary buds was established in MS medium supplemented with 6-benzyladenine (BA) (0.5 mgL−1) as a growth regulator. Three genotypes and three stages of cultivation were considered in the study. On average, 3.5, 4.2, and 6.4 shoots induced per explant were obtained for genotypes B, C, and D, respectively. Several doses (0.1, 0.3, and 0.5%) of ethyl methane sulfonate (EMS) and different exposure times (1, 2, and 3 h) were applied to investigate the effect of the chemical mutagen on the formation of axillary buds. Genetic variation among the collected plants, the micro-propagated plants during three sub-cultivations, and the plants regenerated in the presence of the mutagen was evaluated by means of randomly amplified microsatellite polymorphism (RAMP) markers. A high genetic stability was observed in the micro-propagation of Mexican oregano for the three genotypes and three sub-cultivations, presenting 100% of monomorphic bands. The genetic variation observed in the different collections of wild populations (A, R, and V) and after treatment with EMS regarded 34 and 35% of polymorphic loci, respectively.

Description: Surface flow constructed wetlands (SFCWs) can be effectively used to treat agricultural drainage waters, reducing N and P surface water pollution. In the Venice Lagoon drainage basin (northeastern Italy), an SFCW was monitored during 2007–2013 to assess its performance in reducing water, N, and P loads more than 10 years after its creation. Nitrogen concentrations showed peaks during winter due to intense leaching from surrounding fields. Phosphorus concentrations were higher after prolonged periods with no discharge, likely due to mobilization of P of the decomposing litter inside the basin. Over the entire period, N removal efficiency was 83% for NO3–N and 79% for total N; P removal efficiency was 48% for PO4–P and 67% for total P. Values were higher than in several other studies, likely due to the fluctuating hydroperiod that produced discontinuous and reduced outflows. Nitrogen outlet concentrations were reduced by the SFCW, and N removal ratios decreased with increasing hydraulic loading, while no strong correlations were found in the case of P. The SFCW was shown to be an effective long-term strategy to increase water storage and reduce N and P loads in the Venice Lagoon drainage basin.

Description: This study evaluated F5 breeding lines, which were obtained by crossing five parents of spring spelt from different geographical regions characterized by various morphological and performance traits. A total of 11 quantitative traits were analyzed, including six traits relating to yield components, four traits relating to grain quality, and one trait relating to plant height and sensitivity to lodging. The applied clustering method supported the identification of four groups of breeding lines which were presented graphically in a heatmap with dendrogram. Group I contained 33.0% of the breeding lines, and it was most distant from the remaining groups. It was composed of tall plants characterized by high values of yield components, high fat content, and high sensitivity to lodging. Groups III (30.4%) and IV (17.0%) were most similar and were characterized by lower values of yield components, a high content of protein, ash and fiber, and lower sensitivity to lodging. Group II contained 19.6% of the breeding lines, and it was more similar to groups III and IV than group I. Breeding lines with satisfactory performance traits can be selected from each group and used to breed new varieties with the desired traits.

Description: Camelina sativa is an oilseed plant that produces seed oil rich in vitamins, UFA (unsaturated fatty acids), phytosterols, and polyphenols. Most, but not all, bioactive compounds are soluble in oil. So far, studies have been based analyzing the profile of bioactive compounds only in oil. As part of this work, it was decided to examine the seeds, oil, and pomace of four genotypes of Camelina sativa (three spring genotypes and one winter cultivar). The transmission of bioactive compounds to oil and pomace was compared to their content in seeds. The quantitative profile of selected bioactive compounds was analyzed: eight flavonoid aglycons, 11 phenolic acids, three carotenoids, and 19 fatty acids. As a result of pressing more than 80% of flavonoids entered oil, whereas 20% remained in the pomace. When the content of phenolic acids in seeds and in oil was compared, it turned out that on average 50% of these compounds entered oil. Among all the phenolic acids under analysis the highest contents of chlorogenic, caffeic, and sinapic acids were found both in camelina seeds and oil. Similarly to the other bioactive compounds, more than 70% of fat-soluble carotenoids were extracted from camelina seeds with oil. Most of the genotypes had the fatty acid composition and the ω-6/ω-3 ratio characteristic of camelina oil. Camelina oil is characterized by properties that enable its extensive use in the food industry.

Description: Potassium (K+) is an abundant and important macronutrient for plants. It plays crucial roles in many growth and developmental processes, and growth is inhibited under low −K+ conditions. The molecular mechanisms operating under K+ starvation have been little reported in banana, which is a non-model plant. We conducted a transcriptome analysis of banana (Musa acuminata L. AAA group, cv. Cavendish) in response to low −K+ stress. The phenotypic traits and transcriptomic profiles of banana leaves and roots were compared between low −K+ (LK) and normal −K+ (NK) groups. The phenotypic parameters for the LK group, including fresh and dry weight, were lower than those for the NK group, which suggested that low −K+ stress may inhibit some important metabolic and biosynthetic processes. K+ content and biomass were both decreased in the LK group compared to the NK group. Following ribonucleic acid sequencing (RNA-Seq), a total of 26,796 expressed genes were detected in normal −K+ leaves (NKL), 27,014 were detected in low −K+ leaves (LKL), 29,158 were detected in normal −K+ roots (NKR), and 28,748 were detected in low −K+ roots (LKR). There were 797 up-regulated differentially expressed genes (DEGs) and 386 down-regulated DEGs in NKL versus LKL, while there were 1917 up-regulated DEGs and 2830 down-regulated DEGs in NKR versus LKR. This suggested that the roots were more sensitive to low −K+ stress than the leaves. DEGs related to K+ transport and uptake were analyzed in detail. Gene functional classification showed that the expression of genes regarding ABC transporters, protein kinases, transcription factors, and ion transporters were also detected, and may play important roles during K+ deficiency.

Description: The application of biochar is promising for improving the physical, chemical and hydrological properties of soil. However, there are few studies regarding the influence of biochar particle size. This study was conducted to evaluate the effect of biochar size on the physical, chemical and hydrological properties in sandy and loamy tropical soils. For this purpose, an incubation experiment was conducted in the laboratory with eight treatments (control (only soil), two soils (loamy and sandy soil), and three biochar sizes (〈0.15 mm; 0.15–2 mm and 〉2 mm)). Analyses of water content, bulk density, total porosity, pore size distribution, total carbon (TC) and total N (TN) were performed after 1 year of soil–biochar-interactions in the laboratory. The smaller particle size 〈0.15 mm increased water retention in both soils, particularly in the loamy soil. Bulk density slightly decreased, especially in the loamy soil when biochar 〉 2 mm and in the sandy soil with the addition of 0.15–2 mm biochar. Porosity increased in both soils with the addition of biochar in the range of 0.15–2 mm. Smaller biochar particles shifted pore size distribution to increased macro and mesoporosity in both soils. Total carbon content increased mainly in sandy soil compared to control treatment; the highest carbon amount was obtained in the biochar size 0.15–2 mm in loamy soil and 〈0.15 mm in sandy soil, while the TN content and C:N ratio increased slightly with a reduction of the biochar particle size in both soils. These results demonstrate that biochar particle size is crucial for water retention, water availability, pore size distribution, and C sequestration.

Description: Maize (Zea mays L.) grain yield and compositional quality are interrelated and are highly influenced by environmental factors such as temperature, total precipitation, and soil water storage. Our aim was to develop a regression model to account for this relationship among grain yield and compositional quality traits across a large geographical region. Three key growth periods were used to develop algorithms based on the week of emergence, the week of 50% silking, and the week of maturity that enabled collection and modeling of the effect of weather and climatic variables across the major maize growing region of the United States. Principal component analysis (PCA), stepwise linear regression models, and hierarchical clustering analyses were used to evaluate the multivariate relationship between weather, grain quality, and yield. Two PCAs were found that could identify superior grain compositional quality as a result of ideal environmental factors as opposed to low-yielding conditions. Above-average grain protein and oil levels were favored by less nitrogen leaching during early vegetative growth and higher temperatures at flowering, while greater oil than protein concentrations resulted from lower temperatures during flowering and grain fill. Water availability during flowering and grain fill was highly explanatory of grain yield and compositional quality.

Description: The aim of this study is to establish a binary logistic regression method to evaluate and select cucumber cultivars (Cucumis sativus L.) with a longer postharvest shelf life. Each sample was evaluated for commercial quality (fruit aging, weight loss, wilting, yellowing, chilling injury, and rotting) every 7 days of storage. Simple and multiple binary logistic regression models were applied in which the dependent variable was the probability of marketability and the independent variables were the days of storage, cultivars, fruit weight loss, and months of evaluation. The results showed that cucumber cultivars with a longer shelf life can be selected by a simple and multiple binary logistic regression analysis. Storage time was the main determinant of fruit marketability. Fruit weight loss strongly influenced the probability of marketability. The logistic model allowed us to determine the cucumber weight loss percentage over which a fruit would be rejected in the market.

Description: Soybean (Glycine max L.) seedlings may be exposed to low or high temperatures under early or conventional soybean production systems practiced in the US Midsouth. However, a wide range of soybean cultivars commonly grown in the region may inherit diverse tolerance to degrees of temperatures. Therefore, a study was conducted in a controlled-environment facility to quantify 64 soybean cultivars from Maturity Group III to V, to low (LT; 20/12 °C), optimum (OT; 30/22 °C), and high (HT; 40/32 °C) temperature treatments during the seedling growth stage. Several shoot, root, and physiological parameters were assessed at 20 days after sowing. The study found a significant decline in the measured root, shoot, and physiological parameters at both low and high temperatures, except for root average diameter (RAD) and lateral root numbers under LT effects. Under HT, shoot growth was significantly increased, however, root growth showed a significant reduction. Maturity group (MG) III had significantly lower values for the measured root, shoot, and physiological traits across temperature treatments when compared with MG IV and V. Cultivar variability existed and reflected considerably through positive or negative responses in growth to LT and HT. Cumulative stress response indices and principal component analysis were used to identify cultivar-specific tolerance to temperatures. Based on the analysis, cultivars CZ 5225 LL and GS47R216 were identified as most sensitive and tolerant to LT, while, cultivars 45A-46 and 5115LL identified as most tolerant and sensitive to HT, respectively. The information on cultivar-specific tolerance to low or high temperatures obtained in this study would help in cultivar selection to minimize stand loss in present production areas.

Description: This paper aims to evaluate the spatial persistence of wild oat patches in four wheat fields over time to determine the economic feasibility of using late-season wild oat maps for early site-specific weed management (SSWM) next season. The spatial persistence of wild oat patches was analyzed by three tests: land use change detection between years, spatial autocorrelation, and analysis of spreading distance. The temporal trend of wild oat patch distribution showed a clear persistence and a generalized increase in the infested area, with a noticeable level of weed aggregation and a tendency in the new weed patches to emerge close to older ones. To economically evaluate the SSWM, five simulations in four agronomic scenarios, varying wheat yields and losses due to wild oat, were conducted. When yield losses due to wild oat were minimal and for any of the expected wheat yields, some SSWM simulations were more economically profitable than the overall application in most of the fields. Nevertheless, when the yield losses due to wild oat were maximal, all SSWM simulations were less profitable than overall treatment in all the analyzed fields. Although the economic profit variations achieved with SSWM treatments were modest, any of the site-specific treatments tested are preferred to herbicide broadcast over the entire field, in order to reduce herbicide and environmental pollution.

Description: Fertilization plays important roles in improving soil fertility and in increasing crop yield. Soil microbial communities are sensitive indicators of soil quality and health, which could be affected by fertilization strategy. However, our knowledge on how organic–inorganic fertilizers application affects soil bacterial communities remains largely poorly understood. In this study, we investigated the long-term effects of different organic–inorganic fertilization strategies: without fertilizer (CK), fertilizers NPK (CF), fertilizers NPK, plus 30% organic manure (CFM1), and fertilizers NPK plus 60% organic manure (CFM2) on soil bacterial communities in paddy fields. Results showed that the bacterial 16S ribosomal DNA (rDNA) gene abundances in treatments CF, CFM1, and CFM2 were 1.44, 1.54, and 1.28 times higher than that in CK and the ACE index in treatment CFM1 was 9.0% greater than that in treatment CFM2, respectively. Fertilization strategy significantly changed the relative abundance of Nitrospirae, Gemmatimonadetes, and unclassified bacteria at the phylum level and bacteria belonging to order Nitrospira, candidate bacterium SBR2076, unclassified bacteria, Syntrophobacterales, and Solibacterales at the order level, respectively. High organic–inorganic fertilizer application rates inhibited the growth of Nitrospirae by 20–35%, and stimulated the growth of Gemmatimonadetes by 14–77%, relative to the rest of the treatments, respectively. Hierarchical cluster and principal coordinate analysis (PCoA) showed that the fertilization strategy affected the bacterial community structures, and the organic–inorganic fertilized treatments possessed similar bacterial community structures. Furthermore, soil pH, total nitrogen (TN), and soil organic carbon (SOC) were the main driving factors altering the bacterial communities. Our results suggested that combined organic–inorganic fertilizers application increased soil nutrient contents and bacterial abundances, and this could be an optimized fertilization strategy in regulating soil bacterial communities for rice production.

Description: The growth rate of eucalyptus in the dry season was significantly lower than that in the wet season. However, the limiting factors of eucalyptus growth in the dry season are not clear. In this paper, through the continuous monitoring of the diameter growth and environmental factors of 5.5-year-old Eucalyptus urophylla S. T. Blake × E. grandis W. Hill ex Maiden in the dry season, the diameter growth characteristics of eucalyptus during the dry season were studied and the limiting factors of eucalyptus growth in the dry season were determined. The water and fertilizer management activities in the dry season were evaluated to verify the growth and water use characteristics of Eucalyptus urophylla × E. grandis in the dry season under the conditions of mitigation limiting factors and provide the basis for further increasing the growth rate of eucalyptus. The results show that the diameter fluctuation of Eucalyptus urophylla × E. grandis is cyclical and the diameter cumulative growth during the dry season monitoring is consistent with the Gompertz model. Atmospheric temperature and soil water content are the main factors limiting the growth of Eucalyptus urophylla × E. grandis in the dry season. Irrigation and fertilization in the dry season can significantly increase the growth of diameter at breast height (DBH) and biomass growth and significantly improve the water use efficiency in the dry season.

Description: As bakery products contribute considerably to the daily intake of the carcinogen acting substance acrylamide (AA), the aim of this study was to evaluate the impact of the management system (conventional vs. organic farming) on AA precursor levels of free asparagine (Asn) across different cultivars of the cereal species, namely winter wheat (Triticum aestivum), winter spelt (Triticum aestivum ssp. spelta) and winter rye (Secale cereale) with simultaneous consideration of gained grain yields and flour qualities. For this purpose, orthogonal field trials were established at two sites in Southwest Germany over two growing seasons (2006–2007 and 2007–2008). The results indicated a significant impact of the management system on free Asn contents in white flour. Across all species, free Asn contents in the white flour was 26% lower under organic compared to conventional farming. The impact of the management system on individual cultivars was obvious with a maximum reduction in free Asn contents of 50% in wheat cultivars if organically produced (e.g., for cultivars Ludwig, Privileg, Capo). For spelt, a significant impact of the management system was only found in 2008 with a reduction in free Asn of up to 25% if organically produced. Across both cropping systems, cultivar Franckenkorn reached the lowest levels of free Asn. For rye, a significant impact of the management system was observed only in 2007 with 33% higher Asn amounts in the conventional management system. Independent of the cropping system, rye reached the highest levels of free Asn followed by wheat and spelt. Depending on species, there was also an impact of the two systems on crude protein. The organically cropped wheat had a significantly lower level, but this was not observed for spelt and for rye only in 2007. The possible reason for the low free Asn content in the organically produced wheat flour could partially be the lower crude protein amount. Furthermore, the results indicated that lower AA contents in bakery products can be achieved by proper selection of species (e.g., 66% lower if rye is replaced by wheat) and cultivars. With an appropriate choice of the cultivar, a reduction of up to 65% was possible within wheat, along with a reduction of 44% within spelt and 12.5% within rye. In summary, the results indicated that organically produced wheat especially offers the opportunity to significantly lower the AA potential of bread and bread rolls by the choice of raw materials low in free Asn.

Description: Mechanical harvesting has become inevitable for cotton production in China due to the rising labor cost in the country. It usually requires a moderate plant height and compact plant architecture. Correlation and stepwise regression were employed to analyze databases of our 24 field experiments between 2010 and 2017 in Hebei Province. The purpose is to identify the relationships between plant architecture traits and seed cotton yield within natural plant height range (58.6–163.2 cm) or preferred plant height range (80–120 cm) for mechanical harvesting in the Yellow River Valley of China, and define some important factors affecting seed cotton yield. Under natural plant height range across all experiments, there was a significantly negative correlation (r = −0.452) between plant height and yield. On limited plant height range desired for mechanical harvesting, the degree of this negative correlation decreased to r = −0.366. The correlation of plant height with seed cotton yield varied greatly with year, cultivar, plant density and mepiquat chloride (MC) application. Moreover, stepwise regression analysis picked internode length of the 1st (generally including 1st–7th mainstem node from bottom), 2nd (8th–12th node) and 4th (above 17th node) mainstem section and the length of lower fruiting branch (LFB) as significant factors influencing seed cotton yield under plant height range of 80–120 cm. The results have implications for precise control of cotton plant architecture preferred for mechanized harvesting in China.

Description: Water availability is a major constraint for crop production in semiarid environments. The impact of tillage practices on water potential gradient, water transfer resistance, yield, and water use efficiency (WUEg) of spring wheat was determined on the western Loess Plateau. Six tillage practices implemented in 2001 and their effects were determined in 2016 and 2017 including conventional tillage with no straw (T), no-till with straw cover (NTS), no-till with no straw (NT), conventional tillage with straw incorporated (TS), conventional tillage with plastic mulch (TP), and no-till with plastic mulch (NTP). No-till with straw cover, TP, and NTP significantly improved soil water potential at the seedling stage by 42, 47, and 57%, respectively; root water potential at the seedling stage by 34, 35, and 51%, respectively; leaf water potential at the seedling stage by 37, 48, and 42%, respectively; tillering stage by 21, 24, and 30%, respectively; jointing stage by 28, 32, and 36%, respectively; and flowering stage by 10, 26, and 16%, respectively, compared to T. These treatments also significantly reduced the soil–leaf water potential gradient at the 0–10 cm soil depth at the seedling stage by 35, 48, and 35%, respectively, and at the 30–50 cm soil depth at flowering by 62, 46, and 65%, respectively, compared to T. Thus, NTS, TP, and NTP reduced soil–leaf water transfer resistance and enhanced transpiration. Compared to T, the NTS, TP, and NTP practices increased biomass yield by 18, 36, and 40%; grain yield by 28, 22, and 24%; and WUEg by 24, 26, and 24%, respectively. These results demonstrate that no-till with straw mulch and plastic mulching with either no-till or conventional tillage decrease the soil–leaf water potential gradient and soil–leaf water transfer resistance and enhance sustainable intensification of wheat production in semi-arid areas.

Description: Potato early blight caused by Alternaria solani generates significant economic losses in crops worldwide. Forecasting the risk of infection on crops is indispensable for the management of the fungal disease, ensuring maximum economic benefit but with minimal environmental impact. This work aimed to calculate the interrupted wet periods (IWP) according to the climate conditions of A Limia (Northwest of Spain) to optimize the prediction against early blight in potatoes. The study was performed during nine crop cycles. The relative hourly humidity and Alternaria concentration in the crop environment were taken into account. Alternaria levels were monitored by aerobiological techniques using a LANZONI VPPS-2000 volumetric trap. The relationships between weather conditions and airborne Alternaria concentration were statistically analyzed using Spearman correlations. To establish the effectiveness of wetness periods, the first important Alternaria peak was taken into account in each crop cycle (with a concentration greater than 70 spores/m3). Considering the six interrupted wet periods of the system, it was possible to predict the first peak of Alternaria several days in advance (between 6 and 38 days), except in 2007 and 2018. Automated systems to predict the initiation of early blight in potato crop, such as interrupted wet periods, could be an effective basis for developing decision support systems. The incorporation of aerobiological data for the calculation of interrupted wet periods improved the results of this system.

Description: Huanglongbing (HLB or citrus greening) is a disease caused by an insect-transmitted bacterial pathogen Candidatus Liberibacter asiaticus (CLas). Thermotherapy has been successfully used by others to reduce the population of CLas bacteria in HLB-affected citrus trees under greenhouse studies. Thermotherapy is the application of heat as a strategy to reduce the adverse economic impact of certain pests and diseases. CLas is a fastidious, non-cultivable organism. The high variance in CLas titers in canopy samples together with this lack of cultivability makes it impossible to use classical bacteriological techniques to measure the viability either before or after treatments. Therefore, we used the survival rates of a surrogate bacterium, Klebsiella oxytoca, in order to evaluate the effectiveness of a mobile thermotherapy delivery system developed for in-field treatment of HLB-affected trees. K. oxytoca is a Gram-negative, rod-shaped bacterium that was originally isolated from soil and has been used in the development of industrial applications related to ethanol fuel production. It served as a biologically-based sensor of temperature stress (biosensor) in this study. Thermocouples and biosensor packets (plastic cups with suspended small snap-top tubes) containing the K. oxytoca were attached to an HLB-affected citrus tree and their canopy locations mapped. The mobile thermotherapy treatment hood covered the canopy of the HLB-affected tree. Then, steam and hot water were injected through nozzles inside of the hood to increase the temperature of the tree canopy. A standard temperature–time combination of 54 °C for 90 s was chosen based on preliminary studies where heat treatment parameters caused a significant reduction in CLas populations without inflicting permanent damage to the tree. The survival ratio of the K. oxytoca in the biosensor packets was found to range from complete elimination to 5% with treatments of 250 s and a maximum temperature of 54 °C.

Description: Grafting of vegetable plants is done primarily to reduce the potential for damage caused by soil-borne diseases. Most of the watermelons (Citrullus) grown in the Mediterranean Basin, including in Israel, are grafted, mainly on interspecific hybrid pumpkin (Cucurbita) rootstocks. Biblical law (Leviticus 19:19) does not allow intergeneric grafting, so in recent years, great efforts have been made in Israel to find or breed watermelon rootstocks. Both interspecific and intergeneric grafting can have negative or positive effects on fruit yield and quality after harvest. The inconsistencies in fruit quality and shelf-life parameters can be attributed to differences in production environments. However, many farmers are grafting and planting the same rootstock-scion combination all over the country, regardless of local soil, water, and climactic conditions. We studied the effect of similar rootstock-scion combinations on watermelon yield and fruit quality in three regions of Israel differing in soil type and altitude. Fruit-quality parameters were evaluated after 4 days at 21 °C (local marketing simulation). Fruit quality was significantly affected, mainly by the growing region, based on factorial analysis, but also by rootstock-scion combination, regardless of rootstock vigor. Therefore, the best rootstock-scion combination needs to be found and adopted for each growing region. Grafting was essential for watermelon crop survival in contaminated soils and improved both plant performance and postharvest fruit quality, but was not a factor in non-contaminated soils.

Description: Using manure in potato production has been considered for its potential environmentally friendly effects. Two years of field experiments were conducted to evaluate the effects of different kinds of fertilizer and soil surface treatments on potato growth. Experimental treatments consisted of three soil surface treatments, including black plastic-film mulch (BM), transparent film-plastic mulch (TM), and non-mulched (NM) treatment, and two fertilizer treatments, including inorganic fertilizer (IF), and cattle manure (CM). The results showed that low environmental temperatures at early growth stages harmed potato growth. The more suitable hydrothermal environment under BM treatment induced 9–67%, 1–223%, 15–30%, −1–11% and 18–34% greater plant height, leaf area index (LAI), tuber yield, crop evapotranspiration (ETc) and water use efficiency (WUE), respectively, than NM and TM treatments. Plastic-film mulch increased soil carbon dioxide concentration, especially for the TM treatment. With low soil nitrogen content during the whole growth stage, and high soil carbon dioxide concentration during sprout and seedling stages, the CM treatment reduced plant height, LAI, tuber yields, ETc and WUE by 27–155%, 2–96%, 6–23%, 2–6% and 8–25%, respectively. These results suggest that inorganic fertilizer with black plastic-film mulch is still the best choice for potato production, and further studies are needed to identify the best level of cattle manure used under black plastic-film mulch.

Description: Bioactive compounds such as phenols and phytic acid in wheat contribute to antioxidant capacities. (1) Background: Prior studies drew a general conclusion that the environment affected bioactive compounds greatly, but how the single environmental factor affects these characteristics remains unclear. (2) Methods: We conducted that twenty-eight winter wheat genotypes were grown in replicated trials at seven locations in China for two consecutive years and subdivided the environmental factor into five soil factors and six meteorological factors to evaluate the impact on the antioxidant capabilities and bioactive compounds contents of wheat grains by using principal component analysis (PCA). RT-PCR was used to identify gene expression of bioactive compounds under different conditions. (3) Results: Temperature affects bioactive compounds contents and antioxidant capacities greatly in wheat grains. Accumulation time, daylight length, and daily maximum temperature showed a high correlation with bioactive compounds contents and antioxidant capacities, especially in the vegetative growth phase. The gene TaMIPs related to phytic acid and TaPAL1, TaC3H1, TaC4H, Ta4CL1, and TaCOMT1 related to total phenolics had higher gene expression level with larger temperature differences in wheat grains. (4) Conclusions: The planting locations with higher temperatures and longer daylight length could produce higher contents of bioactive compounds and antioxidant capacities and the cooler temperatures of a planting location might produce wheat grains with lower phytic acid contents in wheat grains.

Description: Sorghum (Sorghum bicolor L. Moench) is a promising novel crop for Central Europe. However, enhancements in cold tolerance and early maturity are essential for a successful adaptation to cooler climates. We scored a broad sorghum diversity set (n = 338) for early chilling tolerance, high-latitude adaptation, and bioenergy related agronomical traits in multi-environment trials. Our results show a high phenotypic variation and medium to high heritabilities for most traits, indicating that a robust breeding progress is feasible. Several public accessions with a good adaptation to cooler climates were identified, which can serve as valuable base material for sorghum breeding in temperate areas. Genome-wide association studies reveal a polygenic (quantitative) character for most of the traits, confirming previous studies. Hence, for practical breeding, it will be difficult to conduct efficient marker-assisted selection for temperate-adaptation traits in genetically diverse material.

Description: There is limited information regarding the effect of biochar (BioC) on improving the fertility of degraded soils (fallow and grassland), particularly with respect to changes with time. The objective of the study was to evaluate, in a three-year field experiment, the influence of BioC on the physicochemical properties of Haplic Luvisol. BioC, obtained via wood waste pyrolysis at 650 °C, was applied to the soil of subplots under fallow and grassland at rates of 0, 1, 2, and 3 kg·m−2. Soil samples were collected eight times, from 2013 to 2015. Physicochemical characterization was performed for soil and BioC by analyzing density, pH, surface charge, as well as ash and organic carbon content. BioC’s influence on the physicochemical properties of degraded soils was determined by analyzing the changes in pH, specific surface area, radius, and volume of the micropore. The addition of BioC affected analyzed soils to varying degrees. In the case of the fallow, a positive effect on changes in these parameters was observed, particularly at the highest biochar dose and for the last year of the experiment. However, for the grassland, in most cases we observed the opposite trend—for example, pH and specific surface area values decreased with increasing biochar dose. We believe that it is necessary to examine how BioC affects sorption properties of organic matter of fallow and grassland soils, as well as the BioC’s influence on humic acids of these soils as a function on BioC dose and function of time.

Description: We investigated if hot exhaust gas from a combine harvester could be used to reduce germination or kill weed seeds during the harvesting process. During the threshing and cleaning process in the combine, weed seeds and chaff are separated from the crop grains. After this separation, weed and crop seeds not collected can be exposed to exhaust gas before seeds are returned to the field. Seeds of some common weed species (Alopecurus myosuroides, Centaurea cyanus, Geranium pusillum, Lapsana communis, Lolium perenne, Rumex crispus, Spergula arvensis, and Tripleurospermum inodorum) were treated with exhaust gas at temperatures of 75 °C or 85 °C, 110 °C, and 140 °C for 2, 4, and 6 s, respectively. Afterwards, the seeds were germinated for 16 days. We found that 75 °C and 85 °C were insufficient to significantly reduce germination of the seeds after three durations. Some seeds were still able to germinate after 4 s exposure of 110 °C. An exposure of 140 °C for 4 and 6 s repressed germination of all species. We conclude that there is potential to develop combine harvesters that exploit the exhaust gas to either kill or reduce the ability of weed seeds to germinate before seeds are returned to the field.

Description: Incorporating foliar zinc (Zn) spray into existing pesticide application is considered highly cost-effective to biofortify wheat (Triticum aestivum) with Zn. However, the effectiveness of this combined approach in terms of Zn enrichment and bioavailability in grain and its milling fractions is not well examined. Two-year field experiments were conducted in 2017 and 2018 with three sets of foliar applications (nil Zn as control, foliar Zn alone, and foliar Zn plus pesticides) at the anthesis, milk stage, or both. Compared to the control, grain yield was not affected by foliar Zn application alone or combined with pesticides, while the Zn concentrations and bioavailability substantially increased in the whole-grain, bran, and flour irrespective of spray timing. Yield losses by 28%–39% (2018 vs. 2017) led to 7%–18% and 18%–38% increase of Zn density in grain and flour, respectively. Further, such negative responses were uncoupled by foliar spray of Zn or Zn plus pesticides, and absent from the control plants. Nonetheless, grain Zn biofortification was achieved in both low- and high-yield plants with either Zn spray alone or combined with pesticides. Together with the enhanced Zn bioavailability in grain, bran, and flour, the effectiveness of this combined strategy is validated to biofortify wheat with Zn.

Description: Phosphorus (P) deficiency often occurs in paddy fields due to its high fixation, and low solubility and mobility in soils, especially under water stress. Available soil P and plant P uptake could be improved through the application of zeolite. However, little is known about the impact of zeolite on P uptake in rice under water stress. A two-year lysimetric experiment using a split-split plot design investigated the effects of zeolite (0 or 15 t ha−1) and P (0 or 60 kg ha−1) applications on water use, P uptake, and grain yield in rice under two irrigation management systems (continuous flooding irrigation (CF) and improved alternate wetting and drying irrigation (IAWD)). Both irrigation systems produced equivalent effective panicles and grain yield. Compared with CF, IAWD reduced water use and aboveground P uptake and improved water-use efficiency (WUE) in rice. The applications of zeolite or P alone increased grain yield, WUE, soil available P, and stem, leaf, and panicle P concentration, and aboveground P uptake, but had no significant effect on water use. The enhanced grain yield induced by zeolite was related to the increase in aboveground P uptake. The zeolite application enhanced NH4+–N retention in the topsoil and prevented NO3−–N from leaching into deeper soil layers. Moreover, Zeolite made lower rates of P fertilizer possible in paddy fields, with benefits for remaining P supplies and mitigating pollution due to excessive P. These results suggest that the combined application of zeolite and P under improved AWD regime reduced water use, improved P uptake and grain yield in rice, and alleviated environment risk.

Description: Determining the spatio-temporal distribution and association of pests and natural enemies would be useful for implementing biological control of pests and could also be used in site-specific pest management. In this study, the spatio-temporal distribution and association of aphids, plant bugs, and natural enemies were assessed in alfalfa fields using geo-statistics and spatial analysis by distance indices (SADIE). Additionally, the effect of alfalfa hay-harvesting on the spatial and temporal distribution of these insects was investigated for the first time. Geostatistical analysis indicated that the degree of dependence (DD) was ≥75% for 11 out of 39, 9 out of 35, 3 out of 12, 10 out of 29, and 2 out of 20 datasets for pea aphid Acyrthosiphon pisum, spotted alfalfa aphid Therioaphis maculata, cowpea aphid Aphis craccivora, alfalfa plant bug Adelphocoris lineolatus, and tarnished plant bug Lygus rugulipennis, respectively. The results also indicated that DD was ≥75% in 7 out of 45, 18 out of 45, and 3 out of 20 datasets for Coccinella septempunctata, Hippodamia variegata, and Pterostichus melanarius, respectively. Harvesting decreased the aggregation of the ladybirds, which resulted in a decrease in the index of aggregation. The geo-statistics results were confirmed by SADIE in 75% of datasets. These results can be used in biological control and site-specific management of aphids and plant bugs in alfalfa fields.

Description: Understanding the dynamics of invasive species under global climate change requires knowledge about the effects of environmental factors on germination and emergence. We considered Conyza canadensis (L.) Cronq., an invasive species that is quickly invading Southern European agricultural systems, and performed germination assays in growth chambers at eight constant temperatures with alternating light (2.5, 5, 10, 15, 20, 25, 30, and 40 °C, with 12 h/12 h—light/dark), three alternating temperatures in alternating light (12/18, 17/23, and 22/28 °C, with 12 h/12 h—light/dark) and three fixed temperatures (15, 20, and 25 °C) in complete darkness. Furthermore, emergence assays were performed in pots considering four depths (0, 2.5, 5, and 10 mm), three temperatures with alternating light (15, 20, and 25 °C) and un-treated or pre-treated seeds (water imbibition and light for two days). C. canadensis was able to germinate in a wide range of temperatures (from 5–10 °C to 30 °C). The highest germination capacity was observed at 15 °C (light/dark); no differences were observed at 17/23 and 22/28 °C with respect to 20 and 25 °C (light/dark), while germinations were significantly reduced at 12/18 °C. The lowest germination time was observed at 25 °C (light/dark) and it was significantly increased at 12/18 °C and in darkness. The highest emergence was from 0 mm depth; pre-treatment significantly increased the emergence from 2.5 mm and 5 mm depth, but not from 10 mm depth. Modeling germination rates as a function of temperature allowed us to determine Tb = 6.8 °C (base temperature) and Tc = 35.8 °C (ceiling temperature). In light of these results, the potential for C. canadensis to spread into new environments and possible new management methods are discussed.

Description: Black pepper is an industrial crop with high economic and export value. However, black pepper production in Vietnam has been seriously affected by the root-knot nematodes, Meloidogyne spp. The purpose of this study was to select active endophytic bacteria (EB) for the cost-effective and environmentally friendly management of Meloidogyne sp. Thirty-four EB strains were isolated. Of these, five isolates displayed the highest activity, demonstrating 100% mortality of J2 nematodes. These active EB were identified based on sequencing and phylogenetic analysis of the 16S rRNA gene; notably, all the potential endophytic bacterial strains belong to the genus of Bacillus. In greenhouse tests, Bacillus megaterium DS9 significantly reduced nematodes in the soil and pepper plant roots with great inhibition values of 81.86% and 73.11%, respectively, with the lowest rate of nematodes built up at 0.23. This active antinematodes strain also showed good effect on promoting pepper plant growth. Some enzymatic activities, including chitinase and protease activity related to the biocontrol of Meiloidogyne sp., were also detected. The results investigated in the current study suggested that these selected EB strains may be good candidates for biocontrol agents of Meloidogyne sp., and plant promoting effects. The results also enhanced the novel active antinematode endophytic bacterial communities.

Description: Agropyron mongolicum Keng, a perennial diploid grass with high drought tolerance, belongs to the genus Agropyron, tribe Triticeae. It has made tremendous contributions toward reseeding natural pasture and seeding artificial grassland in China, especially in the arid and semi-arid area of northern China. As a wild relative of wheat, A. mongolicum is also a valuable resource for the genetic improvement of wheat crops. MicroRNAs are small non-coding RNA molecules ubiquitous in plants, which have been involved in responses to a wide variety of stresses including drought, salinity, chilling temperature. To date, little research has been done on drought-responsive miRNAs in A. mongolicum. In this study, two miRNA libraries of A. mongolicum under drought and normal conditions were constructed, and drought-responsive miRNAs were screened via Solexa high throughput sequencing and bioinformatic analysis. A total of 114 new miRNAs were identified in A. mongolicum including 53 conservative and 61 unconservative miRNAs, and 1393 target genes of 98 miRNAs were predicted. Seventeen miRNAs were found to be differentially expressed under drought stress, seven (amo-miR21, amo-miR62, amo-miR82, amo-miR5, amo-miR77, amo-miR44 and amo-miR17) of which were predicted to target on genes involved in drought tolerance. QRT-PCR analysis confirmed the expression changes of the seven drought related miRNAs in A. mongolicum. We then transformed the seven miRNAs into Arabidopsis thaliana plants, and three of them (amo-miR21, amo-miR5 and amo-miR62) were genetically stable. The three miRNAs demonstrated the same expression pattern in A. thaliana as that in A. mongolicum under drought stress. Findings from this study will better our understanding of the molecular mechanism of miRNAs in drought tolerance and promote molecular breeding of forage grass with improved adaption to drought.

Description: A three year on-farm conservation-tillage experiment was initiated in fall of 2008 at Randle Farm LLC, located in Auburn, AL. Our objective was to evaluate and demonstrate implementation of tenable conservation vegetable production practices using high amounts of cover crop residues that reduce soil erosion, improve soil productivity and quality, reduce energy costs, and promote farm profitability. Cereal rye, crimson clover, and a rye and crimson clover mixture were evaluated as cover crops; these were terminated using either a prototype two-stage roller/crimper alone or followed by an application of 2.5 L a.i. ha−1 45% cinnamon (Cinnamomum verum L.) oil (cinnamaldehyde, eugenol, eugenol acetate,)/45% clove oil (eugenol, acetyl eugenol, caryophyllene) mixture in the spring prior to crop establishment. A winter fallow conventional tillage system was included for comparison. Watermelons, cantaloupes, and okra then were transplanted into each cover crop and termination treatment combination in mid-May, utilizing a modified transplanter equipped with a custom fitted subsoiling shank and row cleaners to alleviate soil compaction and facilitate transplanting. In all years, all cover crop treatments exceeded 4000 kg ha−1 and in 2009 and 2011, exceeded 6000 kg ha−1. At 21 days after termination in 2010 when the slowest termination occurred, higher termination rates were obtained for cereal rye (95% to 96%) followed by lower termination rates for the clover/rye mixture (83% to 85%); the lowest termination rates were obtained for crimson clover (66% to 68%). Commercially available cinnamon/clove oil solution provided little cover crop termination above that provided by a roller crimper alone. Volumetric soil moisture content for rolled/crimped cover crops was consistently higher compared to the conventional system, indicating that flattened and desiccated cover crop residue provided water conservation. In 2010 and 2011, yields for cantaloupe, okra, and watermelons were consistently higher for the conventional system compared with no-till system with cover crops likely due to weed cultivation limitations and insect pressure. Future studies need to focus on weed control and integrated pest management.

Description: Water deficit stress can negatively affect oil quality, crop yields and soil infertility. Thus, we investigated the effects of rice-straw biochar, foliar silicon and their combination on quality, yield and physiological traits of sunflower grown under three water deficit stress treatments. Water stress treatments were 50% (WS0; no stress), 70% (WS1; moderate stress) and 90% (WS2; severe stress) depletion of the available soil moisture. The results showed that WS1 and WS2 negatively affected oil quality, mycorrhizal spores, yield and physiological traits of the sunflower; however, biochar, silicon and their combination significantly (p ≤ 0.05) improved most of those traits. Oil and oleic acid contents of sunflower grown under WS2 were decreased by 18% and 25.8% compared to those grown under WS0, respectively. Nevertheless, the biochar and silicon combination resulted in higher oil (10.2%) and oleic acid (12.2%) in plants grown under WS2 than those grown in untreated plots. Also, a significant increase (182% and 277%) in mycorrhizal spores was obtained in soil treated combination of biochar and silicon under WS1 and WS2 in comparison to untreated soil, respectively. On the other hand, plants grown under WS1 and WS2 exhibited reduced seed yield ha−1 by 16.5% and 53.5% compared to those grown under WS0, respectively. However, seed yield ha−1 were increased by 26.8% and 27.1% in plots treated with combined treatment compared to untreated plants, respectively. In addition, the biochar and silicon combination significantly increased stomatal conductance by 21.4% and 12.1%, reduced proline by 56.6% and 51.2% and reduced catalase activity by 13.4% and 17.3% under WS1 and WS2 compared to those grown in untreated plots, respectively. Therefore, the combined treatment of biochar and silicon can minimize and alleviate the negative effects of WS1 and WS2, improve oil quality, physiological traits, microbial activity and seed yield ha−1 in sunflower plants.