ALBERT

Note: Contents: The Theory of Externalities and Public Goods: The Lifework of Richard Cornes ; Efficiency in Contests Between Groups ; Multiple-Aggregate Games ; Strategic Coalition Formation in Global Public Good Provision ; Evolution of Consistent Conjectures in Semi-aggregative Representation of Games, with Applications to Public Good Games and Contests ; Mixed-Strategy Kant-Nash Equilibrium and Private Contributions to a Public Good ; Social Creation of Pro-social Preferences for Collective Action ; Community Size and Public Goods in Hume’s Treatise of Human Nature ; Decentralized Leadership ; Debt NeutralityWithout Altruism: Voluntary Contributions to Public Goods as ‘Operative Linkages’ ; Counterterrorism: A Public Goods Approach ; Linguistic Assimilation and Ethno-religious Conflict ; International Carbon Trade and National Taxes: Distributional Impacts of Double Regulation ; Thinking Local but Acting Global? The Interplay Between Local and Global Internalization of Externalities ; Showdown in Schönau: A Contest Case Study

Note: Contents ISOLA Code for Multiple-Point Source Modeling—Review / Jiří Zahradník and Efthimios Sokos Seismic Moment Tensors in Anisotropic Media: A Review / Václav Vavryčuk The Frequency-Domain Moment-Tensor Inversion: Retrieving the Complete Source Moment-Tensor Spectra and Time Histories / Xiaoning Yang, Brian W. Stump and Mason D. Macphail Berkeley Seismic Moment Tensor Method, Uncertainty Analysis, and Study of Non-double-couple Seismic Events / Douglas S. Dreger Estimating Stability and Resolution of Waveform Inversion Focal Mechanisms / S. Scolaro, C. Totaro, D. Presti, Sebastiano D’Amico, G. Neri and B. Orecchio The Method of Cataclastic Analysis of Discontinuous Displacements / Yu. L. Rebetsky and A. Yu. Polets Challenges in Regional Moment Tensor Resolution and Interpretation / Simone Cesca and Sebastian Heimann The Role of Moment Tensors in the Characterization of Hydraulic Stimulations / Ismael Vera Rodriguez, James Rutledge and Sergey Stanchits Constrained Moment Tensors: Source Models and Case Studies / Jan Šílený Seismic Deformation Derived from Moment Tensor Summation: Application Along the Hellenic Trench / Anastasia Kiratzi, Christoforos Benetatos and Filippos Vallianatos Estimation of Empirical Green’s Tensor Spatial Derivative Elements: A Preliminary Study Using Strong Motion Records in Southern Fukui Prefecture, Japan / Michihiro Ohori Retrieval of the Seismic Moment Tensor from Joint Measurements of Translational and Rotational Ground Motions: Sparse Networks and Single Stations / Stefanie Donner, Heiner Igel, Céline Hadziioannou and the Romy group Overview of Moment Tensor Analysis in New Zealand / John Ristau Applications of Moment Tensor Solutions to the Assessment of Earthquake Hazard in Canada / J. F. Cassidy, H. Kao, John Ristau and A. Bent Intraplate Earthquakes in Europe—Source Parameters from Regional Moment Tensor Analysis / Jochen Braunmiller Source Characteristics of the January 8, 2013 (M W = 5.7) and May 24, 2014 (M W = 6.8) North Aegean Earthquakes Sequence / Doğan Kalafat, Kıvanç Kekovalı and Ali Pınar Investigating the Focal Mechanisms of the August 4th, 2003, Mw 7.6, South Orkney Islands Earthquake and its Aftershocks Sequence / M. P. Plasencia Linares, M. Guidarelli, M. Russi and G. F. Panza Waveform Modelling of 2009 Bhutan Earthquake of Magnitude 6.1 (Mw) Using Local Network Data of North East India / Santanu Baruah and Midusmita Boruah Resolving the Tectonic Stress by the Inversion of Earthquake Focal Mechanisms. Application in the Region of Greece. A Tutorial / Ioannis G. Kassaras and Vasilis Kapetanidis Relative Locations of Clustered Earthquakes in the Sea of Marmara and States of Local Stresses in the East of the Central Marmara Basin / Yasemin Korkusuz Öztürk and Nurcan Meral Özel Focal Mechanisms of Earthquakes and Stress Field of the Earth Crust in Azerbaijan / G. J. Yetirmishli and S. E. Kazimova Seismotectonic Crustal Strains of the Mongol-Baikal Seismic Belt from Seismological Data / Alena Seredkina and Valentina Melnikova The Stress State of Seismic Areas of the Central and East Asia / Yu. L. Rebetsky, A. Yu. Polets, O. A. Kuchay and N. A. Sycheva The Significance of Crustal Velocity Model in Moment Tensor Solutions: A Case Study of Yedisu Earthquakes / Fatih Turhan, Musavver Didem Cambaz and Jiří Zahradník An Overview of the Seismicity and Tectonics of the Black Sea / Doğan Kalafat Coulomb Stress Changes in the Area of December 2013–January 2014 Sannio-Matese Seismic Sequence (Southern Italy) / Santanu Baruah and Sebastiano D’Amico Active Faulting in the Earth’s Crust of the Baikal Rift System Based on the Earthquake Focal Mechanisms / Vladimir A. Sankov and Anna A. Dobrynina Quaternary Stress Field and Faulting in the Western Part of the Catanzaro Trough (Calabria, Southern Italy) / F. Brutto, F. Muto, M. F. Loreto, Sebastiano D’Amico, N. De Paola, V. Tripodi and S. Critelli A Seismogenic Zone Model for Seismic Hazard Studies in Northwestern Africa / J. A. Peláez, J. Henares, M. Hamdache and C. Sanz de Galdeano A Trial Modeling of Perturbed Repeating Earthquakes Combined by Mathematical Statics, Numerical Modeling and Seismological Observations / Keisuke Ariyoshi, Shunichi Nomura, Naoki Uchida and Toshihiro Igarashi Getting Started with GMT: An Introduction for Seismologists / Matthew R. Agius Devices for a Rotational Ground Motion Measurement / Leszek R. Jaroszewicz and Anna Kurzych

Note: Contents Part I Setting the Scene The Anthropocene—What Does It Entail for Science? / Gesche Krause The Role of Knowledge Exchange in Earth System Science—The Earth System Knowledge Platform (ESKP) / Gesche Krause, Ute Münch, Jana Kandarr, Oliver Jorzik and Pia Klinghammer The AWI Approach at the Science-Stakeholder Interface / Gesche Krause, Klaus Grosfeld and Wolfgang Hiller Part II Dialogue Approaches of ESKP Contributions to AWI Knowledge Transfer Regional Awareness on Sea Level Rise Effects—What Do We Know About the South-Eastern North Sea Coast? / Nina Eschweiler, Tobias Dolch and Christian Buschbaum Climate Change and Biodiversity—Implications for the Local Fisheries Sector / Christina Hörterer, Maximilian Schupp, Andreas Benkens and Bela H. Buck Linking Biodiversity Research Communities / Sonja Knapp, Alexandra Kraberg, Stephan Frickenhaus, Stefan Klotz, Oliver Schweiger and Gesche Krause Engaging Forecast Users During the Year of Polar Prediction / Winfried Hoke, Kirstin Werner, Helge Goessling and Thomas Jung Governance of Resources for Arctic Sustainable Policy and Practice (GRASP)—Stakeholder Mapping / Sebastian Knecht, Andreas Herber and Kathrin Stephen Building Bridges at the Arctic Science-Policy Interface / Volker Rachold Part III Data-Products of ESKP Contributions to AWI Knowledge Transfer The Web Portal ‘meereisportal.de’ in Context of ESKP / Klaus Grosfeld, Renate Treffeisen, Jölund Asseng and Georg Heygster Knowledge Transfer by the Global Terrestrial Network for Permafrost (GTN-P) / Boris K. Biskaborn and Hugues Lantuit A Web-Based Information System for Macrobenthic Biodiversity in the German North Sea / Jan M. Holstein Tackling Marine Litter—LITTERBASE / Melanie Bergmann, Mine B. Tekman, Andreas Walter and Lars Gutow Part IV Modelling Approaches of ESKP Contributions to AWI Knowledge Transfer Arctic Sea Ice Change, Large-Scale Atmospheric Circulation Patterns and Extreme Climate and Weather in Europe / Ralf Jaiser and Dörthe Handorf Extending and Visualizing the TsunAWI Simulation Database of the Indonesia Tsunami Early Warning System (InaTEWS) / Antonia Immerz, Sven Harig and Natalja Rakowsky Streamflow Forecasting and Biodiversity / Monica Ionita, Madlene Pfeiffer and Stephan Frickenhaus Part V Pathways to Formalizing Knowledge Transfer Accompanying ESKP Projects—Development of a Process Assessment Strategy Within ESKP@AWI / Gesche Krause and Maximilian Felix Schupp Science and Society—The Time to Interact / Gesche Krause, Klaus Grosfeld and Annette Breckwoldt Erratum to: A Web-Based Information System for Macrobenthic Biodiversity in the German North Sea / Jan M. Holstein

Note: Contents Part I Regional Initiatives 1 South/Southeast Asia Research Initiative (SARI): A Response to Regional Needs in Land Cover/Land Use Change Science and Education / Krishna Prasad Vadrevu 2 SERVIR: Connecting Earth Observation Satellite Data to Local Science Applications / Africa Flores, Dauna S. Coulter, Ashutosh S. Limaye, and Daniel Irwin Part II Biomass Burning, Air Pollution and Impacts 3 Emission of Toxic Air Pollutants and Greenhouse Gases from Crop Residue Open Burning in Southeast Asia / Nguyen Thi Kim Oanh, Didin Agustian Permadi, Nguyen Phan Dong, and Dang Anh Nguyet 4 Impacts of Biomass Burning Emissions on Tropospheric NO2 Vertical Column Density over Continental Southeast Asia / Syuichi Itahashi, Itsushi Uno, Hitoshi Irie, Jun-Ichi Kurokawa, and Toshimasa Ohara 5 Observations of Asian Dust and Agricultural Fire Smoke Episodes: Transport and Impacts on Regional Air Quality in Southeast China / Yonghua Wu, Yong Han, and Tijian Wang 6 Spatio-Temporal Analysis of Land and Forest Fires in Indonesia Using MODIS Active Fire Dataset / Israr Albar, I. Nengah Surati Jaya, Bambang Hero Saharjo, Budi Kuncahyo, and Krishna Prasad Vadrevu 7 Severe Air Pollution Due to Peat Fires During 2015 Super El Niño in Central Kalimantan, Indonesia / Hiroshi Hayasaka and Alpon Sepriando 8 Forest and Land Fires in Riau Province: A Case Study in Fire Prevention Policy Implementation with Local Concession Holders / Bambang Hero Saharjo and Alex Yungan 9 Biomass Burning Emissions Variation from Satellite-Derived Land Cover, Burned Area, and Emission Factors in Vietnam / Kristofer Lasko and Krishna Prasad Vadrevu 10 Enhancement of Fire Early Warning System in Vietnam Using Spatial Data and Assimilation / Ba Tung Nguyen, Khac Phong Do, Nguyen Le Tran, Quang Hung Bui, Thi Nhat Thanh Nguyen, Van Quynh Vuong, and Thanh Ha Le 11 Greenhouse Gas Budget of Terrestrial Ecosystems in Monsoon Asia: A Process-Based Model Study for the Period 1901–2014 / Akihiko Ito and Motoko Inatomi 12 Simulations of Emissions, Air Quality, and Climate Contribution in Southeast Asia for March and December / Teerachai Amnuaylojaroen, Mary C. Barth, Gabriele Pfister, and Cindy Bruyere 13 Study of Lower Tropospheric Ozone over Central and Eastern China: Comparison of Satellite Observation with Model Simulation / Sachiko Hayashida, Satoko Kayaba, Makoto Deushi, Kazuyo Yamaji, Akiko Ono, Mizuo Kajino, Tsuyoshi Thomas Sekiyama, Takashi Maki, and Xiong Liu 14 Multi-scale Simulations of Atmospheric Pollutants Using a Non-hydrostatic Icosahedral Atmospheric Model / Daisuke Goto, Teruyuki Nakajima, Dai Tie, Hisashi Yashiro, Yousuke Sato, Kentaroh Suzuki, Junya Uchida, Shota Misawa, Ryoma Yonemoto, Tran Thi Ngoc Trieu, Hirofumi Tomita, and Masaki Satoh 15 Project MANTRA: Multi-platform ANalysis of TRace Gases and Aerosols with a Focus on Atmospheric CO2 Measurements for Southeast Asia / Ronald C. Macatangay 16 Dry Deposition of Reactive Nitrogen Species in Tropics / Reema Tiwari and Umesh Kulshrestha Part III Aerosol Pollution 17 Aerosols and Climate Change: Present Understanding, Challenges, and Future Outlook / S. Ramachandran 18 Organic Aerosols in South and East Asia: Composition and Sources / Chandra Mouli Pavuluri and Kimitaka Kawamura 19 Shortwave Radiation, Climate Change, and Anthropogenic Aerosols in China / Tadahiro Hayasaka 20 Conceptualizing How Severe Haze Events Are Impacting Long-Term Satellite-Based Trend Studies of Aerosol Optical Thickness over Asia / Zhao Yang Zhang, Man Sing Wong, and James R. Campbell 21 Aerosol Properties over Kuching, Sarawak from Satellite and Ground- Based Measurements / Arnis Asmat, Khairunnisa Abdul Jalal, and Siti Noratiqah Mohd Deros 22 Investigating the Aerosol Type and Spatial Distribution During Winter Fog Conditions over Indo-Gangetic Plains / Muhammad Fahim Khokhar and Naila Yasmin 23 Satellite Aerosol Optical Depth over Vietnam - An Analysis from VIIRS and CALIOP Aerosol Products / Vinh T. Tran, Ha V. Pham, Thanh T. N. Nguyen, Thanh X. Pham, Quang Hung Bui, Anh X. Nguyen, and Thuy T. Nguyen 24 Satellite Remote Sensing of Aerosols and Gaseous Pollution over Pakistan / Salman Tariq and Zia Ul-Haq Part IV Land Use/Cover Change and Impacts 25 The Impact of Land Cover and Land Use Change on the Indian Monsoon Region Hydroclimate / Dev Niyogi, Subashini Subramanian, U. C. Mohanty, C. M. Kishtawal, Subimal Ghosh, U. S. Nair, M. Ek, and M. Rajeevan 26 Decadal Land-Cover Changes in China and Their Impacts on the Atmospheric Environment / Mengmeng Li and Yu Song 27 Analyzing the Influence of Urban Growth on Thermal Environment Through Demographic, Environmental, and Physical Parameters in Bangladesh / Yogesh Kant, Saiful Azim, and Debashis Mitra 28 Ecosystem Carbon Stock, Atmosphere, and Food Security in Slash-and-Burn Land Use: A Geospatial Study in Mountainous Region of Laos / Yoshio Inoue 29 Spatial Modeling of Land Cover/Land Use Change and Its Effects on Hydrology Within the Lower Mekong Basin / Kel N. Markert, Robert E. Griffin, Ashutosh S. Limaye, and Richard T. McNider 30 Land–Atmosphere Interactions in South Asia: A Regional Earth Systems Perspective / Venkataramana Sridhar and Prasanth Valayamkunnath Erratum Index

Note: Contents Part I Historical Background of Plankton Research in the Region Overview of the History of Biological Oceanography in the Southwestern Atlantic, with Emphasis on Plankton / Demetrio Boltovskoy and Jean L. Valentin Part II Regional Settings of Productivity and Nutrient Cycling Physical Oceanography of the SW Atlantic Shelf: A Review / Alberto R. Piola, Elbio D. Palma, Alejandro A. Bianchi, Belmiro M. Castro, Marcelo Dottori, Raul A. Guerrero, Marina Marrari, Ricardo P. Matano, Osmar O. Möller Jr, and Martín Saraceno Nutrient Transport, Cycles, and Fate in Southern Brazil (Southwestern Atlantic Ocean Margin) / Luis F. Niencheski Surface Macronutrient Dynamics of the Drake Passage and the Argentine Sea / Flavio E. Paparazzo and José L. Esteves Perspective: Continental Inputs of Matter into Planktonic Ecosystems of the Argentinean Continental Shelf—the Case of Atmospheric Dust / Augusto C. Crespi-Abril, Elena S. Barbieri, Leilén Gracia Villalobos, Gaspar Soria, Flavio E. Paparazzo, Joanna M. Paczkowska, and Rodrigo J. Gonçalves Overview on Primary Production in the Southwestern Atlantic / Vivian Lutz, Valeria Segura, Ana Dogliotti, Virginia Tavano, Frederico P. Brandini, Danilo L. Calliari, Aurea M. Ciotti, Virginia F. Villafañe, Irene R. Schloss, Flavia M. P. Saldanha Corrêa, Hugo Benavides, and Denise Vizziano Cantonnet Part III Plankton of Shelf and Boundary Systems Phytoplankton Assemblages of the Subtropical South West Atlantic: Composition and Dynamics in Relation to Physical and Chemical Processes / Frederico P. Brandini Community Structure and Spatiotemporal Dynamics of the Zooplankton in the South Brazilian Bight: A Review / Miodeli Nogueira Jr. and Frederico P. Brandini Zooplankton Communities of the Argentine Continental Shelf (SW Atlantic, ca. 34°–55°S), An Overview / Georgina D. Cepeda, Brenda Temperoni, Marina E. Sabatini, María D. Viñas, Carla M. Derisio, Betina A. Santos, Julieta C. Antacli, and Luciano N. Padovani Ecological Role of Common Appendicularian Species from Shelf Waters Off Argentina / Fabiana L. Capitanio, Mariela L. Spinelli, María L. Presta, Gastón E. Aguirre, Guillermo Cervetto, Marcelo Pájaro, and Carla M. Derisio Ichthyoplankton Associated to the Frontal Regions of the Southwestern Atlantic / Eduardo M. Acha, Martin D. Ehrlich, José H. Muelbert, Marcelo Pájaro, Daniel Bruno, Laura Machinandiarena, and Mariana Cadaveira Part IV Plankton of Coastal Systems Flagellates Versus Diatoms: Phytoplankton Trends in Tropical and Subtropical Estuarine-Coastal Ecosystems / Clarisse Odebrecht, Maria C. Villac, Paulo C. Abreu, Lumi Haraguchi, Piter D. F. Gomes, and Denise Rivera Tenenbaum Phytoplankton Patterns and Processes in a Tropical-Subtropical Transition Region: Santa Catarina Coast, Southern Brazil / Leonardo R. Rörig, Marcio da Silva Tamanaha, Graziela da Rosa Persich, Carlos A. França Schettini, and Eliane C. Truccolo Schettini Near-Surface Biogeochemistry and Phytoplankton Carbon Assimilation in the Rio de la Plata Estuary / Danilo L. Calliari, Mónica Gómez-Erache, Denise Vizziano Cantonnet, and Cecilia Alonso Satellite-Measured Phytoplankton and Environmental Factors in North Patagonian Gulfs / Gabriela N. Williams, Miriam E. Solís, and José L. Esteves Mesozooplankton Structure and Seasonal Dynamics in Three Coastal Systems of Argentina: Bahía Blanca Estuary, Pirámide Bay, and Ushuaia Bay / Anabela A. Berasategui, María C. López Abbate, Valeria C. D’Agostino, María L. Presta, Román Uibrig, Tami M. García, Eugenia Nahuelhual, Carlo J. Chazarreta, María S. Dutto, Maximiliano Garcia, Fabiana Capitanio, and Mónica S. Hoffmeyer Trophic Ecology of the White Croaker (Micropogonias furnieri Desmarest, 1823) and Rough Scad (Trachurus lathami Nichols, 1920) Larvae in the Río de la Plata Estuary / Laura Rodríguez-Graña, Mario Vera, Guillermo Cervetto, and Danilo L. Calliari Part V Gelatinous Zooplankton Diversity, Species Composition and Assemblage Dynamics of Estuarine Gelatinous and Semi-Gelatinous Zooplankton from Brazil / Miodeli Nogueira Jr., Lorena Silva do Nascimento, Pedro Vieira Maciel, Sebastião Tilbert, and Lívia Dias Oliveira An Overview of the Medusozoa from the Southwestern Atlantic / Agustín Schiariti, María S. Dutto, André Carrara Morandini, Renato M. Nagata, Daiana Y. Pereyra, Francisco A. Puente Tapia, Luciana Díaz Briz, and Gabriel Genzano Part VI Harmful Algae and Their Impacts Alexandrium tamarense/catenella Blooms in the Southwestern Atlantic: Paralytic Shellfish Toxin Production and Its Trophic Transference / Nora G. Montoya, Mario O. Carignan, and José I. Carreto Harmful Algal Blooms in the Río de la Plata Region / Silvia M. Méndez and José I. Carreto Harmful Marine Microalgae in Coastal Waters of Chubut (Patagonia, Argentina) / Alicia V. Sastre, Norma H. Santinelli, Miriam E. Solís, Laura B. Pérez, Soledad Díaz Ovejero, Leilén Gracia Villalobos, Andreana Cadaillón, and Valeria C. D’Agostino Part VII Plankton, Climate Change and Human-Induced Changes Composition and Structure of Phytoplankton Communities in Coastal Environments with Anthropogenic Disturbance (Patagonia, Argentina) / Norma H. Santinelli, Alicia V. Sastre, Mónica N. Gil, and José L. Esteves Responses of Subantarctic Marine Phytoplankton to Ozone Decrease and Increased Temperature / Marcelo P. Hernando, Gabriela Malanga, Gastón O. Almandoz, Irene R. Schloss, and Gustavo A. Ferreyra Global Change and Plankton Ecology in the Southwestern Atlantic / Elena S. Barbieri, María A. Marcoval, Rodrigo D. Hernández-Moresino, Mariela L. Spinelli, and Rodrigo J. Gonçalves Index

Note: Contents Part I Meteorology The Influence of WRF Parameterisation Schemes on High Resolution Simulations Over Greece / I. Tegoulias, S. Kartsios, I. Pytharoulis, S. Kotsopoulos and Theodore S. Karacostas Assessing the Sensitivity of COSMO/GR Atmospheric Model to Effectively Simulate the Influence of Diabatic Heating on Eastern Mediterranean Explosive Cyclogenesis Under Different Parameterizations of the Model Physics / J. Kouroutzoglou, E. Avgoustoglou, H.A. Flocas, M. Hatzaki, P. Skrimizeas, A. Lalos, K. Keay and I. Simmonds Evaluation of WRF Parameterization Schemes During Heat-Wave Events Over the Greater Area of South–East Mediterranean / C. Giannaros, D. Melas and T.M. Giannaros A Study of an Extreme Hot Weather Event in Greece with the WRF-ARW Atmospheric Model / G. Emmanouil, D. Vlachogiannis, A. Sfetsos, S. Karozis and A. Tasopoulou Lightning Forecasting in Europe: Results Obtained from One Year of Operational Simulations / T.M. Giannaros, V. Kotroni and K. Lagouvardos Numerical Simulations and Observational Study of a Mesoscale Convective System in France, During the HyMeX—SOP1 Using the WRF Model /1 S. Dafis, K. Lagouvardos, V. Kotroni, T.M. Giannaros and A. Bartzokas Design and Evaluation of Sensitivity Tests of COSMO Model Over the Mediterranean Area / E. Avgoustoglou, A. Voudouri, P. Khain, F. Grazzini and J.M. Bettems Comparison and Validation of WRF Model Physics Parameterizations Over the Domain of Greece / N. Politi, P.T. Nastos, A. Sfetsos, D. Vlachogiannis, N.R. Dalezios, N. Gounaris, M.R. Cardoso and M.M.P. Soares Severe Weather Events and Sea Level Variability Over the Mediterranean Sea: The WaveForUs Operational Platform / Y. Krestenitis, I. Pytharoulis, Theodore S. Karacostas, Y. Androulidakis, C. Makris, K. Kombiadou, I. Tegoulias, V. Baltikas, S. Kotsopoulos and S. Kartsios The Implementation of a Dust Wet Deposition Scheme in the WRF-CHEM Model / K. Tsarpalis, A. Papadopoulos and P. Katsafados Temperature Seasonal Predictability of the WRF Model / G. Varlas, P. Katsafados and A. Papadopoulos Numerical Modeling of a Tornado Event at Skala, Lakonia, Peloponnese in September 2015 / M.P. Mylonas, P.T. Nastos and Ioannis T. Matsangouras Towards Predictability Limit: Advancing the Deterministic Skill of Ensembles / I. Kioutsioukis Marine Boundary Layer Offshore and Coastal Coupled Simulations / C. Stathopoulos, G. Galanis and G. Kallos Observational and Numerical Study of a Tornado Outbreak in Attica and Euboea / A. Lampiris, S. Dafis and G. Papavasileiou The Effect of Surface Heterogeneity on the Vertical Structure of the Saharan Convective Boundary Layer / G. Papangelis, M. Tombrou and J. Kalogiros Numerical Study of the Medicane of November 2014 / I. Pytharoulis, Ioannis T. Matsangouras, I. Tegoulias, S. Kotsopoulos, Theodore S. Karacostas and P.T. Nastos Numerical Modeling Analysis of Tornadoes Using the COSMO.GR Model Over Greece / Ioannis T. Matsangouras, E. Avgoustoglou, F. Gofa, I. Pytharoulis, P.T. Nastos and H.W. Bluestein Performance of RegCM4 Model During Heat Waves—A Case Study for China / D.K. Papanastasiou, X. Huang, A. Poupkou, X. Pu, P. Zanis, T. Wang and D. Melas The Role of Heat Extinction Depth Concept to Fire Behavior: An Application to WRF-SFIRE Model / S. Kartsios, Theodore S. Karacostas, I. Pytharoulis and A.P. Dimitrakopoulos Impacts of Observational Data Assimilation on Operational Forecasts / A. Voudouri, E. Avgoustoglou and P. Kaufmann Comparative Forecasts of a Local Area Model (WRF) in Summer for Cyprus / F. Tymvios, D. Charalambous, J. Lelieveld and S. Michaelides Implementation of a Hybrid Surface Layer Parameterization Scheme for the Coupled Atmosphere-Ocean Wave System WEW / P. Katsafados, G. Varlas, A. Papadopoulos and G. Korres Development and Implementation of a Soil Moisture Perturbation Method for EPS Initial Conditions / P. Louka, F. Gofa, C. Marsigli and A. Montani The Impact of Cyclone Xaver on Hydropower Potential in Norway . . . 175 I. Cheliotis, G. Varlas and K. Christakos Heavy Convective Rainfall Forecast Over Paraguay Using Coupled WRF-Cloud Model / V. Spiridonov, J. Baez and B. Telenta The Heat Health Warning System of DWD—Concept and Lessons Learned / A. Matzarakis Impact of Storm Seeding to Hailstone Features in Central Macedonia / D. Foris and V. Foris Validating SAF NWC Products Over the Greek Area / A. Karagiannidis, K. Lagouvardos, V. Kotroni and T.M. Giannaros Use of Global Precipitation Measurement’s Satellite Data for the Study of a Mesoscale Convective System /D. Mitropoulos and H. Feidas Flash Flood Risk and Vulnerability Analysis in Urban Areas: The Case of October 22, 2015, in Attica, Greece / K. Papagiannaki, V. Kotroni, K. Lagouvardos and A. Bezes The First Joint Hydro-Meteo Warnings in Croatia During Heavy Rainfall Period in October 2015 / P. Mutic, T. Jurlina, T. Vujnovic, D. Oskorus, N. Strelec-Mahovic and T. Renko A Total Weighted Least Squares Method for the Determination of the Meteoric Water Line of Precipitation for Hydrological Purposes / A.A. Argiriou, V. Salamalikis and E. Dotsika Storm Characteristics Over Central Macedonia and Thessaly and Their Relation to Atmospheric Parameters / E. Chatzi Radar Climatology of Supercell Thunderstorms in Northern and Central Greece / M. Christodoulou and M. Sioutas Comparison of Physically and Image Based Atmospheric Correction Methods for Sentinel-2 Satellite Imagery / G. Lantzanakis, Z. Mitraka and N. Chrysoulakis First Rains as Extreme Events Influencing Marine Primary Production / D. Kotta, D. Kitsiou and P. Kassomenos Hail Characteristics and Cloud Seeding Effect for Hail Suppression in Central Macedonia, Greece / M. Sioutas Satellite Rainfall Error Analysis with the Use of High-Resolution X-Band Dual-Polarization Radar Observations Over the Italian Alps / M.N. Anagnostou, J. Kalogiros, E. Nikolopoulos, Y. Derin, E.N. Anagnostou and M. Borga The DAPHNE Conceptual Model for Designing a Precipitation Enhancement Project in Thessaly, Greece / Theodore S. Karacostas, I. Pytharoulis, I. Tegoulias, D. Bampzelis, S. Kartsios, S. Kotsopoulos, P. Zanis, E. Katragkou and K. Tympanidis Watershed Size, an Alternative or a Misguided Parameter for River’s Waterpower? Implementation in Macedonia, Greece / G. Grimpylakos, K. Albanakis and Theodore S. Karacostas Survey of the Severe Hailstorms During Summer 2014 in the Northern Part of Greece / P. Fragkouli, A. Tyraski and K. Lagouvardos Assessment of the Thermal Comfort Conditions in a University Campus Using a 3D Microscale Climate Model, Utilizing Mobile Measurements / P.T. Nastos, K.P. Moustris, I. Charalampopoulos, I.K. Larissi and Athanasios G. Paliatsos Diurnal Distribution of Storm Characteristics in Central Macedonia During the Warm Season of the Year Using a C-Band Weather Radar / D. Bampzelis and Theodore S. Karacostas Rain Enhancement Feasibility Potential of Orographic Clouds Over Northern Greece / K. Tympanidis, Theodore S. Karacostas and D. Bampzelis A Preliminary Study on the Effect of Rainfall Events on Human Thermal Comfort Under Hot Weather Conditions / I. Charalampopoulos and I. Tsiros One Day-Ahead Prognosis of Energy Demand Using Artificial Intelligence and Biometeorological Indices / D. Zafirakis, K.P. Moustris, D.H. Alamo and R.J. Nebot Medina The Effect of Rainfall Intensity on the Flood Generation of Mountainous Watersheds (Chalkidiki Prefecture, North Greece) / A. Kastridis and D. Stathis Air Temperature Estimation Over the Ainos Mountain, Kefallinia Island Using Linear Regression Analysis / S. Maniatis, A. Kamoutsis, A. Chronopoulou-Sereli and P.T. Nastos Dust Over the Area of the East Mediterranean: The Severe Dust Event of the Period 7–12 September 2015. Synoptic and Dynamic Analysis / K. Nicolaides and F. Tymvios On the Dynamics Underlying the Emergence of Coherent Structures in Barotropic Turbulence / N.A. Bakas, N.C. Constantinou and P.J. Ioannou Structure and Stability of Low Amplitude Jet Equilibria in Barotropic Turbulence / N.C. Constantinou, P.

Note: Contents 1 Artificial Neural Network 1.1 Network Architectures 1.1.1 Multilayer Feedforward Networks 1.1.2 Recurrent Networks 1.2 Perceptrons 1.2.1 Rosenblatt’s Perceptron 1.2.2 Multilayer Perceptron 1.3 Linear Network and Bayes Classifier 1.4 Radial Basis Function Network 1.4.1 Radial Basis Function 1.4.2 Interpolation 1.4.3 Receptive Field 1.5 Generalized Regression Network 1.6 Self-organizing Network 1.6.1 Kohonen Self-organizing Map Network 1.6.2 Learning Vector Quantization Network 1.7 Hopfield Network 1.7.1 Continuous Hopfield Network 1.7.2 Discrete Hopfield Network Further Reading 2 Multivariate Harmonic Analysis 2.1 Fourier Transform 2.2 Discrete Fourier Transform 2.3 Discrete Cosine/Sine Transform 2.3.1 Four Forms of DCTs 2.3.2 Four Forms of DSTs 2.4 Filtering 2.5 Fractional Fourier Transform 2.5.1 Continuous FRFT 2.5.2 Discrete FRFT 2.5.3 Multivariate FRFT 2.6 Space–Frequency Distribution 2.6.1 Multivariate Windowed Fourier Transform 2.6.2 General Form 2.6.3 Popular Distributions 2.7 Multivariate Interpolation 2.7.1 Multivariate Polynomial Interpolation 2.7.2 Schoenberg Interpolation 2.7.3 Micchelli Interpolation 2.7.4 Interpolation on Spheres 2.8 Sparse Approximation 2.8.1 Approximation Kernels 2.8.2 Sparse Schemes 2.8.3 Greedy Algorithm 2.9 Spherical Harmonics 2.9.1 Spherical Harmonic Functions 2.9.2 Invariant Subspace under Fourier Transform 2.10 Harmonic Analysis on General Domains 2.10.1 Symmetric Kernels 2.10.2 Smooth Extensions and Approximation 2.11 Harmonic Analysis on Graphs 2.11.1 The Laplacian of a Graph 2.11.2 Eigenvalues and Eigenfunctions 2.11.3 Fourier Expansions Further Reading 3 Multivariate Wavelets 3.1 Multiresolution Analysis 3.1.1 Structure of MRA 3.1.2 Scaling Functions 3.2 Multivariate Orthogonal Wavelets 3.2.1 Separable Wavelets 3.2.2 Non-separable Wavelets 3.2.3 p-Band Wavelets 3.3 Biorthogonal Wavelets 3.3.1 Univariate Biorthogonal Wavelets 3.3.2 Multivariate Biorthogonal Wavelets 3.3.3 p-Band Biorthogonal Wavelets 3.3.4 Semi-orthogonal Wavelets 3.4 Wavelets on Domains 3.4.1 Continuous Extension 3.4.2 Wavelet Expansion 3.5 Discrete Wavelet Transforms 3.5.1 Discrete Orthogonal Wavelet Transforms 3.5.2 Discrete Biorthogonal Wavelet Transforms 3.5.3 Discrete Biorthogonal Periodic Wavelets Transforms 3.5.4 Discrete Harmonic Wavelet Transforms 3.6 Wavelet Packets 3.6.1 Continuous Wavelet Packets 3.6.2 Discrete Wavelet Packets 3.7 Wavelet Variance 3.7.1 Generalized Wavelet Decomposition 3.7.2 Maximal Overlap Discrete Wavelet Transform 3.7.3 Wavelet Variance 3.8 Significant Tests 3.8.1 Haar Wavelet Analysis 3.8.2 Morlet Wavelet Analysis 3.9 Wavelet Threshold and Shrinkage 3.9.1 Wavelet Threshold 3.9.2 Wavelet Shrinkage 3.9.3 Minimax Estimation 3.9.4 Adaptive Denoising Algorithm 3.10 Shearlets, Bandelets, and Curvelets 3.10.1 Shearlets 3.10.2 Bandelets 3.10.3 Curvelets Further Reading 4 Stochastic Representation and Modeling 4.1 Stochastic Processes 4.1.1 Vector Stochastic Processes 4.1.2 Gaussian, Markov, and Wiener Processes 4.2 Stationarity and Trend Tests 4.2.1 Stationarity Tests 4.2.2 Trend Tests 4.3 Patterns and Classification 4.3.1 Principal Component Analysis 4.3.2 Factor Analysis 4.3.3 Cluster Analysis 4.3.4 Discriminant Analysis 4.3.5 Canonical Correlation Analysis 4.4 Multidimensional Scaling 4.5 Vector ARMA Processes 4.5.1 Vector MA(q) Processes 4.5.2 Vector AR(p) Processes 4.5.3 Vector ARMA(p, q) Processes 4.6 Monte Carlo Methods 4.7 Black–Scholes Models 4.8 Stochastic Optimization Further Reading 5 Multivariate Spectral Analysis 5.1 Power Spectral Density 5.2 Periodogram and Correlogram 5.2.1 Algorithms 5.2.2 Bias Analysis 5.2.3 Variance Analysis 5.3 Blackman–Tukey Method 5.3.1 Blackman–Tukey Estimator 5.3.2 Several Common Windows 5.3.3 Positive Semidefinite Window 5.4 Welch Method 5.5 Multitaper Method 5.6 Maximum Entropy Method 5.7 Rational Spectral Estimation 5.8 Discrete Spectral Estimation 5.9 Vector ARMA Spectrum 5.10 Multichannel Singular Spectrum Analysis Further Reading 6 Climate Modeling 6.1 Greenhouse Gases 6.2 Impacts and Feedback of Climate Change 6.3 Framework of Climate Models 6.3.1 Basic Physical Laws Used in Climate Models 6.3.2 Discretization and Parameterization 6.3.3 The Hierarchy of Climate Models 6.4 Coupled Model Intercomparison Project Further Reading 7 Regional Climate Change 7.1 Middle East and Mediterranean Region 7.1.1 Precipitation 7.1.2 Air Temperature 7.1.3 Climate Modeling 7.1.4 Desert Dust 7.1.5 Water Resources 7.1.6 Soil Temperature 7.2 Asia-Pacific Region 7.2.1 Tibetan Plateau 7.2.2 El Niño–Southern Oscillation 7.2.3 Indian Monsoon 7.2.4 Modeling Sea Surface Temperature 7.3 Arctic Region 7.3.1 Sea Ice 7.3.2 Permafrost Carbon Further Reading 8 Ecosystem and Carbon Cycle 8.1 Terrestrial Ecosystems 8.1.1 Terrestrial Hydrologic Cycle 8.1.2 Photosynthesis 8.1.3 Gross and Net Primary Production 8.1.4 Net Ecosystem Production 8.1.5 Terrestrial Nutrient Cycle 8.2 Ocean Ecosystems 8.2.1 Solubility and Air–Sea Gas Exchange 8.2.2 Oceanic Carbon Sink 8.2.3 Compounds in Seawater 8.2.4 Biogeochemical Cycles Further Reading 9 Paleoclimate Proxies 9.1 Tree-Rings 9.1.1 Field Works 9.1.2 Statistical Analysis 9.2 Ice Cores 9.2.1 Ice and Isotopes 9.2.2 Ice Core Samples 9.3 Speleothems 9.3.1 Oxygen Isotope Ratio 9.3.2 Carbon Isotope Ratio 9.3.3 Hydrogen Isotope Ratio Further Reading 10 Strategies for Climate Change Mitigation 10.1 Assessment Methods and Tools 10.1.1 Data Envelopment Analysis 10.1.2 Risk Assessment 10.1.3 Life Cycle Assessment 10.2 Carbon Emissions Reduction 10.2.1 Industrial Sector 10.2.2 Agriculture Sector 10.2.3 The Building Sector 10.2.4 The Transportation Sector 10.2.5 The Household Sector 10.2.6 Low-Carbon Energy 10.3 Carbon Capture, Transport, Utilization, and Storage 10.3.1 Carbon Capture 10.3.2 Transport of CO2 10.3.3 Geological Storage of CO2 10.3.4 Utilization of CO2 10.4 Geoengineering 10.4.1 Space-Based Geoengineering 10.4.2 Atmosphere-Based Geoenginnering 10.4.3 Land-Based Geoengineering 10.4.4 Ocean-Based Geoengineering 10.4.5 Conclusions Further Reading

Note: Contents Part I Solution of Nonlinear Systems 1 Solution of Algebraic Polynomial Systems 1.1 Zeros of Polynomial Systems 1.2 Resultant Methods 1.2.1 Sylvester Resultant 1.2.2 Dixon Resultant 1.3 Gröbner Basis 1.3.1 Greatest Common Divisor of Polynomials 1.3.2 Reduced Gröbner Basis 1.3.3 Polynomials with Inexact Coefficients 1.4 Using Dixon-EDF for Symbolic Solution of Polynomial Systems 1.4.1 Explanation of Dixon-EDF 1.4.2 Distance from a Point to a Standard Ellipsoid 1.4.3 Distance from a Point to Any 3D Conic 1.4.4 Pose Estimation 1.4.5 How to Run Dixon-EDF 1.5 Applications 1.5.1 Common Points of Geometrical Objects 1.5.2 Nonlinear Heat Transfer 1.5.3 Helmert Transformation 1.6 Exercises 1.6.1 Solving a System with Different Techniques 1.6.2 Planar Ranging 1.6.3 3D Resection 1.6.4 Pose Estimation References 2 Homotopy Solution of Nonlinear Systems 2.1 The Concept of Homotopy 2.2 Solving Nonlinear Equation via Homotopy 2.3 Tracing Homotopy Path as Initial Value Problem 2.4 Types of Linear Homotopy 2.4.1 General Linear Homotopy 2.4.2 Fixed-Point Homotopy 2.4.3 Newton Homotopy 2.4.4 Affine Homotopy 2.4.5 Mixed Homotopy 2.5 Regularization of the Homotopy Function 2.6 Start System in Case of Algebraic Polynomial Systems 2.7 Homotopy Methods in Mathematica 2.8 Parallel Computation 2.9 General Nonlinear System 2.10 Nonlinear Homotopy 2.10.1 Quadratic Bezier Homotopy Function 2.10.2 Implementation in Mathematica 2.10.3 Comparing Linear and Quadratic Homotopy 2.11 Applications 2.11.1 Nonlinear Heat Conduction 2.11.2 Local Coordinates via GNSS 2.12 Exercises 2.12.1 GNSS Positioning N-Point Problem References 3 Overdetermined and Underdetermined Systems 3.1 Concept of the Over and Underdetermined Systems 3.1.1 Overdetermined Systems 3.1.2 Underdetermined Systems 3.2 Gauss–Jacobi Combinatorial Solution 3.3 Gauss–Jacobi Solution in Case of Nonlinear Systems 3.4 Transforming Overdetermined System into a Determined System 3.5 Extended Newton–Raphson Method 3.6 Solution of Underdetermined Systems 3.6.1 Direct Minimization 3.6.2 Method of Lagrange Multipliers 3.6.3 Method of Penalty Function 3.6.4 Extended Newton–Raphson 3.7 Applications 3.7.1 Geodetic Application—The Minimum Distance Problem 3.7.2 Global Navigation Satellite System (GNSS) Application 3.7.3 Geometric Application 3.8 Exercises 3.8.1 Solution of Overdetermined System 3.8.2 Solution of Underdetermined System Part II Optimization of Systems 4 Simulated Annealing 4.1 Metropolis Algorithm 4.2 Realization of the Metropolis Algorithm 4.2.1 Representation of a State 4.2.2 The Free Energy of a State 4.2.3 Perturbation of a State 4.2.4 Accepting a New State 4.2.5 Implementation of the Algorithm 4.3 Algorithm of the Simulated Annealing 4.4 Implementation of the Algorithm 4.5 Application to Computing Minimum of a Real Function 4.6 Generalization of the Algorithm 4.7 Applications 4.7.1 A Packing Problem 4.7.2 The Traveling Salesman Problem 4.8 Exercise 5 Genetic Algorithms 5.1 The Genetic Evolution Concept 5.2 Mutation of the Best Individual 5.3 Solving a Puzzle 5.4 Application to a Real Function 5.5 Employing Sexual Reproduction 5.5.1 Selection of Parents 5.5.2 Sexual Reproduction: Crossover and Mutation 5.6 The Basic Genetic Algorithm (BGA) 5.7 Applications 5.7.1 Nonlinear Parameter Estimation 5.7.2 Packing Spheres with Different Sizes 5.7.3 Finding All the Real Solutions of a Non-algebraic System 5.8 Exercises 5.8.1 Foxhole Problem References 6 Particle Swarm Optimization 6.1 The Concept of Social Behavior of Groups of Animals 6.2 Basic Algorithm 6.3 The Pseudo Code of the Algorithm 6.4 Applications 6.4.1 1D Example 6.4.2 2D Example 6.4.3 Solution of Nonlinear Non-algebraic System 6.5 Exercise Reference 7 Integer Programming 7.1 Integer Problem 7.2 Discrete Value Problems 7.3 Simple Logical Conditions 7.4 Some Typical Problems of Binary Programming 7.4.1 Knapsack Problem 7.4.2 Nonlinear Knapsack Problem 7.4.3 Set-Covering Problem 7.5 Solution Methods 7.5.1 Binary Countdown Method 7.5.2 Branch and Bound Method 7.6 Mixed–Integer Programming 7.7 Applications 7.7.1 Integer Least Squares 7.7.2 Optimal Number of Oil Wells 7.8 Exercises 7.8.1 Study of Mixed Integer Programming 7.8.2 Mixed Integer Least Square References 8 Multiobjective Optimization 8.1 Concept of Multiobjective Problem 8.1.1 Problem Definition 8.1.2 Interpretation of the Solution 8.2 Pareto Optimum 8.2.1 Nonlinear Problems 8.2.2 Pareto-Front and Pareto-Set 8.3 Computation of Pareto Optimum 8.3.1 Pareto Filter 8.3.2 Reducing the Problem to the Case of a Single Objective 8.3.3 Weighted Objective Functions 8.3.4 Ideal Point in the Function Space 8.3.5 Pareto Balanced Optimum 8.3.6 Non-convex Pareto-Front 8.4 Employing Genetic Algorithms 8.5 Application 8.5.1 Nonlinear Gauss-Helmert Model 8.6 Exercise References Part III Approximation of Functions and Data 9 Approximation with Radial Bases Functions 9.1 Basic Idea of RBF Interpolation 9.2 Positive Definite RBF Function 9.3 Compactly Supported Functions 9.4 Some Positive Definite RBF Function 9.4.1 Laguerre-Gauss Function 9.4.2 Generalized Multi-quadratic RBF 9.4.3 Wendland Function 9.4.4 Buchmann-Type RBF 9.5 Generic Derivatives of RBF Functions 9.6 Least Squares Approximation with RBF 9.7 Applications 9.7.1 Image Compression 9.7.2 RBF Collocation Solution of Partial Differential Equation 9.8 Exercise 9.8.1 Nonlinear Heat Transfer References 10 Support Vector Machines (SVM) 10.1 Concept of Machine Learning 10.2 Optimal Hyperplane Classifier 10.2.1 Linear Separability 10.2.2 Computation of the Optimal Parameters 10.2.3 Dual Optimization Problem 10.3 Nonlinear Separability 10.4 Feature Spaces and Kernels 10.5 Application of the Algorithm 10.5.1 Computation Step by Step 10.5.2 Implementation of the Algorithm 10.6 Two Nonlinear Test Problems 10.6.1 Learning a Chess Board 10.6.2 Two Intertwined Spirals 10.7 Concept of SVM Regression 10.7.1 e-Insensitive Loss Function 10.7.2 Concept of the Support Vector Machine Regression (SVMR) 10.7.3 The Algorithm of the SVMR 10.8 Employing Different Kernels 10.8.1 Gaussian Kernel 10.8.2 Polynomial Kernel 10.8.3 Wavelet Kernel 10.8.4 Universal Fourier Kernel 10.9 Applications 10.9.1 Image Classification 10.9.2 Maximum Flooding Level 10.10 Exercise 10.10.1 Noise Filtration References 11 Symbolic Regression 11.1 Concept of Symbolic Regression 11.2 Problem of Kepler 11.2.1 Polynomial Regression 11.2.2 Neural Network 11.2.3 Support Vector Machine Regression 11.2.4 RBF Interpolation 11.2.5 Random Models 11.2.6 Symbolic Regression 11.3 Applications 11.3.1 Correcting Gravimetric Geoid Using GPS Ellipsoidal Heights 11.3.2 Geometric Transformation 11.4 Exercise 11.4.1 Bremerton Data References 12 Quantile Regression 12.1 Problems with the Ordinary Least Squares 12.1.1 Correlation Height and Age 12.1.2 Engel’s Problem 12.2 Concept of Quantile 12.2.1 Quantile as a Generalization of Median 12.2.2 Quantile for Probability Distributions 12.3 Linear Quantile Regression 12.3.1 Ordinary Least Square (OLS) 12.3.2 Median Regression (MR) 12.3.3 Quantile Regression (QR) 12.4 Computing Quantile Regression 12.4.1 Quantile Regression via Linear Programming 12.4.2 Boscovich’s Problem 12.4.3 Extension to Linear Combination of Nonlinear Functions 12.4.4 B-Spline Application 12.5 Applications 12.5.1 Separate Outliers in Cloud Points 12.5.2 Modelling Time-Series 12.6 Exercise 12.6.1 Regression of Implicit-Functions References 13 Robust Regression 13.1 Basic Methods in Robust Regression 13.1.1 Concept of Robust Regression 13.1.2 Maximum Likelihood Method 13.1.3 Danish Algorithm 13.1.4 Danish Algorithm with PCA 13.1.5 RANSAC Algorithm 13.2 Application Examples 13.2.1 Fitting a Sphere to Point Cloud Data 13.2.2 Fitting a Cylinder 13.3 Problem 13.3.1 Fitting a Plane to a Slope References 14 Stochastic Modeling 14.1 Basic Stochastic Processes 14.1.1 Concept of Stochastic Processes 14.1.2 Examples for Stochastic Processes 14.1.3 Features of Stochastic Processes 14.2 Time Series 14.2.1 Concept of Time

Note: Contents 1 General Chemical Concepts Introduction Periodic Table and Element Groups Chemical Bonding Chemical Reactions, Stoichiometry, and Kinetics Equilibrium, Steady-State, and Residence Time General Concepts of Organic Chemistry Aqueous Solubility and Polarity Diffusion and Osmotic Potential Freezing Exclusion and Concentration of Solutes Defining Dissolved and Particulate Phases SI Units and Concentrations Ionic Charge Balance Stable Isotope Chemistry 2 Soil Biogeochemistry Introduction Soil Formation and Pedogenesis Soil Classification Soil Texture and Coarse Fragments Soil Moisture Mineralogy Physical-Chemical Features of Clays and Other Soil Colloids Clay Colloids Humic Colloids Chemical Processes in Soils Ion Exchange and Adsorption in Soils Soil Ion Exchange Chemistry and Base Saturation Acidification Complexation Leaching Dissolution and Precipitation Reactions Comparative Analysis of Soil Chemical Properties Soil Exchange Chemistry Soil Distributions of Aluminum Vertical Distributions of Organic Carbon, Nitrogen, and Phosphorus in Soils Forms of Organic Nitrogen in Soils Patterns of Soil Solution Chemistry Integrated Processes of Nutrient Supply and Storage in Soils 3 Microbial Biogeochemistry Introduction Redox Conditions Microbial Nitrogen Transformations Nitrogen Fixation Mineralization or Ammonification Nitrogen Immobilization Nitrification Denitrification Dissimilatory Nitrate Reduction to Ammonium (DNRA) Assimilatory Nitrate Reduction Microbial Sulfur Transformations Mineralization of Organic Sulfur Anaerobic Dissimilatory Sulfate Reduction Assimilatory Sulfate Reduction Microbial Carbon Transformations Fermentation Methane Production Organic Acid Synthesis by Microbes Microbial Processes that Contribute to Bioremediation or Metal Transformations 4 Plant Biogeochemistry Introduction General Plant Chemistry Plant Functional Morphology and Growth Allocation Aboveground Structure and Function Belowground Structure and Function of the Root System Growth Allocation and Root:Shoot Relationships Carbon Fixation, Metabolism, and Plant Production Photosynthesis and Nutrients Photosynthesis and Water Respiration and Metabolism Exchange of Carbon Dioxide in a Forest Ecosystem Energy Budgets and Primary Production Whole-Plant Carbon Cycling and Allocation Metabolic Allocation to Plant Defense Plant Nutrient Cycling Plant Nutrient Absorption Implications of Nutrient Uptake for Acid-Base Chemistry Plant Transport or Translocation of Nutrients Plant Nutrient Resorption Detrital Cycling of Plant Nutrients Plant Canopy Processes Affecting Element Cycling NUE as an Index of Plant Nutrition and Nutrient Cycling Nutrient Limitation Effects of Chemical Stress on Plants Effects of Acidic Deposition on Plant Membrane-Bound Calcium Aluminum Antagonism and Toxicity Stress Plant Responses to Ozone Stress 5 Cycling of Organic Matter Introduction Ecosystem Perspective Storage of Organic Matter in Forest Soils, Biomass, and Woody Debris Soil Organic Matter and Soil Carbon Storage Forest Floor Storage Turnover Rates and Age of Soil Organic Matter Reservoirs Influence of Land Management and Disturbance on SOM Aboveground and Belowground Biomass Coarse Woody Debris Transfers of Organic Matter in Detritus and Solution Aboveground Litterfall Belowground Detrital Inputs From Root Mortality and Turnover Solution Transfers of DOM Decomposition of Organic Matter General Processes of Decomposition Wood Decay Processes Decomposition Rates and Decay Constants Element Cycling Patterns in Decaying Organic Matter Substrate Controls on Decomposition Environmental Controls on Decomposition Biological Influences on Decomposition Transfers of CO2 in the Organic Matter Budget of a Forest Ecosystem 6 Atmospheric Deposition Introduction Atmospheric Chemistry Deposition Processes and Patterns Atmospheric Emissions and Deposition of Sulfur and Nitrogen Measurement and Analysis of Atmospheric Deposition Wet Deposition Dry Deposition Analysis of Precipitation Chemistry Environmental Patterns of Precipitation Chemistry and Atmospheric Deposition Daily Patterns Monthly Patterns Multi-year Trends in Precipitation Chemistry Long-Term Historical Trends in Atmospheric Deposition of Mercury Spatial Patterns: Deposition in North America Spatial Patterns: Influence of Vegetation and Canopy Structure on Atmospheric Deposition Spatial Patterns: Comparison of Atmospheric Deposition at Different Forest Sites Modeling Atmospheric Deposition Patterns A Case Study of Deposition Inputs to a Forest Ecosystem 7 Mineral Weathering Introduction Ecosystem Context Mineral Weathering Processes Heterogeneous Mineral Weathering at Different Scales Controls on Mineral Weathering Rates Mineralogical Controls Influence of Acidity and Complexing Ligands on Weathering Rates Experimental Effects of Acidity on Weathering Rates Physical Influences on Weathering Rates Biotic Influences on Mineral Weathering Rates Influence of Mineral Dissolution on the Solution Chemistry of Natural Waters Genesis and Weathering of Clays Methods of Estimating Weathering Contributions to Ecosystem Element Budgets Mass Balance Estimation Element Tracers as Indicators of Weathering Rates Weathering Estimation with Mineral Depletion Techniques Comparison of Weathering Estimates Comparison of Weathering in Different Ecosystems 8 Watershed Hydrology Ecosystem and Landscape Perspectives Influence of Geology and Soils on Storage and Movement of Water Soil Hydrologic Properties Water Movement and Streamflow Generation in a Watershed Inferring Stream Hydrology from Stream Chemistry in Small Watersheds Water Balance of a Watershed Ecosystem Measurement Techniques for Ecosystem Water Budgets Components of a Water Budget: Precipitation Inputs Components of a Water Budget: Evapotranspiration (ET) Components of a Water Budget: Hydrologic Storage Components of a Water Budget: Stream Runoff Integrated Analysis of a Water Budget 9 Aqueous Chemistry Introduction An Example of Soil Solution Chemistry: Analysis and Interpretation General Concepts of Aqueous Chemistry Sample Collection and Analysis Selection of Analytical Parameters Alkalinity or Acid Neutralizing Capacity (ANC) Acidity and pH Conductivity Ionic Strength and Ion Activity Influence of Temperature on Solution Equilibria Hydrolysis and Chemical Speciation as a Function of pH Rate-Limited Versus Equilibrium Conditions Differential Anion Mobility Effects of Ecosystem Processes on Solution Chemistry Case Studies: Analysis and Interpretation of Aqueous Chemistry in Natural Waters Controls on the Chemistry of Forest Floor Leachates Comparison of Stream Chemistry Along a Hydrologic Flow Gradient Changes in Solution Chemistry and ANC Generation Along a Watershed Drainage Gradient Effects of Land Use on Watershed Exports of Nutrients in Stream Runoff 10 Integrated Element Cycling Introduction General Concepts of Element Cycling Terminology Comparison of Element Cycles in Terrestrial Ecosystems Nitrogen Cycle Calcium Cycle Aluminum Cycle Nutrient Cycling in Relation to Ecosystem Succession Chemical Input-Output Budgets for Watershed Ecosystems Element Cycling at the Landscape Scale: Exports of N and P from Large Watersheds Element Cycling at the Global Scale Global Nitrogen Cycle Global Carbon Cycle 11 Biogeochemical Models Introduction Considerations in the Development of a Biogeochemical Model Steps in Building a Biogeochemical Model An Introductory Model of Watershed Nitrogen Cycling Applications of Biogeochemical Models TREGRO: A Model to Simulate Plant Responses to Interacting Stresses TEM: A Global Model of Net Primary Productivity The CENTURY Soil Organic Matter Model PnET-BGC: An Integrated Biogeochemical Model Watershed Acidification Models Nutrient Cycling Models Models in Watershed Hydrology 12 Ecosystem Disturbance and Stress Introduction Disturbance and Recovery in the Context of Ecological Succession Effects of Forest Harvesting on Watershed Ecosystems Twenty Years of Recovery Following H