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  • 2005-2009  (416,304)
  • 1980-1984  (12)
  • 2010  (437,266)
  • 2009  (416,303)
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  • 1
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    PANGAEA
    In:  Supplement to: Trimborn, Scarlett; Wolf-Gladrow, Dieter A; Richter, Klaus-Uwe; Rost, Björn (2009): The effect of pCO2 on carbon acquisition and intracellular assimilation in four marine diatoms. Journal of Experimental Marine Biology and Ecology, 376(1), 26-36, https://doi.org/10.1016/j.jembe.2009.05.017
    Publication Date: 2024-07-08
    Description: The effect of pCO2 on carbon acquisition and intracellular assimilation was investigated in the three bloom-forming diatom species, Eucampia zodiacus (Ehrenberg), Skeletonema costatum (Greville) Cleve, Thalassionema nitzschioides (Grunow) Mereschkowsky and the non-bloom-forming Thalassiosira pseudonana (Hust.) Hasle and Heimdal. In vivo activities of carbonic anhydrase (CA), photosynthetic O2 evolution, CO2 and HCO3? uptake rates were measured by membrane-inlet mass spectrometry (MIMS) in cells acclimated to pCO2 levels of 370 and 800 ?atm. To investigate whether the cells operate a C4-like pathway, activities of ribulose-1,5-bisphosphate carboxylase (RubisCO) and phosphoenolpyruvate carboxylase (PEPC) were measured at the mentioned pCO2 levels and a lower pCO2 level of 50 ?atm. In the bloom-forming species, extracellular CA activities strongly increased with decreasing CO2 supply while constantly low activities were obtained for T. pseudonana. Half-saturation concentrations (K1/2) for photosynthetic O2 evolution decreased with decreasing CO2 supply in the two bloom-forming species S. costatum and T. nitzschioides, but not in T. pseudonana and E. zodiacus. With the exception of S. costatum, maximum rates (Vmax) of photosynthesis remained constant in all investigated diatom species. Independent of the pCO2 level, PEPC activities were significantly lower than those for RubisCO, averaging generally less than 3%. All examined diatom species operate highly efficient CCMs under ambient and high pCO2, but differ strongly in the degree of regulation of individual components of the CCM such as Ci uptake kinetics and extracellular CA activities. The present data do not suggest C4 metabolism in the investigated species.
    Keywords: Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Aragonite saturation state; Bicarbonate ion; Bicarbonate uptake; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated after Freeman & Hayes (1992); Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chromista; EPOCA; Eucampia zoodiacus; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Extracellular carbonic anhydrase activity; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Intracellular carbonic anhydrase activity per chlorophyll a; Isotopic fractionation, during photosynthis; Laboratory experiment; Laboratory strains; Light:Dark cycle; Measured by loss of 18O (Silverman, 1982); Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Ochrophyta; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; pH meter, WTW, pH 3000; Phytoplankton; Primary production/Photosynthesis; Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas; Radiation, photosynthetically active; Salinity; see reference(s); Single species; Skeletonema costatum; Species; SPP1158; Temperature, water; Thalassionema nitzschioides; Thalassiosira pseudonana
    Type: Dataset
    Format: text/tab-separated-values, 1263 data points
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  • 2
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    PANGAEA
    In:  Supplement to: Kranz, Sven A; Sültemeyer, Dieter; Richter, Klaus-Uwe; Rost, Björn (2009): Carbon acquisition by Trichodesmium: the effect of pCO2 and diurnal changes. Limnology and Oceanography, 54(2), 548-559, https://doi.org/10.4319/lo.2009.54.2.0548
    Publication Date: 2024-07-08
    Description: We investigated carbon acquisition by the N2-fixing cyanobacterium Trichodesmium IMS101 in response to CO2 levels of 15.1, 37.5, and 101.3 Pa (equivalent to 150, 370, and 1000 ppm). In these acclimations, growth rates as well as cellular C and N contents were measured. In vivo activities of carbonic anhydrase (CA), photosynthetic O2 evolution, and CO2 and HCO3- fluxes were measured using membrane inlet mass spectrometry and the 14C disequilibrium technique. While no differences in growth rates were observed, elevated CO2 levels caused higher C and N quotas and stimulated photosynthesis and N2 fixation. Minimal extracellular CA (eCA) activity was observed, indicating a minor role in carbon acquisition. Rates of CO2 uptake were small relative to total inorganic carbon (Ci) fixation, whereas HCO{3 contributed more than 90% and varied only slightly over the light period and between CO2 treatments. The low eCA activity and preference for HCO3- were verified by the 14C disequilibrium technique. Regarding apparent affinities, half-saturation concentrations (K1/2) for photosynthetic O2 evolution and HCO3- uptake changed markedly over the day and with CO2 concentration. Leakage (CO2 efflux : Ci uptake) showed pronounced diurnal changes. Our findings do not support a direct CO2 effect on the carboxylation efficiency of ribulose-1,5-bisphosphate carboxylase/oxygenase (RubisCO) but point to a shift in resource allocation among photosynthesis, carbon acquisition, and N2 fixation under elevated CO2 levels. The observed increase in photosynthesis and N2fixation could have potential biogeochemical implications, as it may stimulate productivity in N-limited oligotrophic regions and thus provide a negative feedback in rising atmospheric CO2 levels.
    Keywords: Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Alkalinity, total, standard deviation; Aragonite saturation state; Bacteria; Based on changes in chla/cells/POC/PON; Bicarbonate ion; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbon/Nitrogen ratio; Carbon/Nitrogen ratio, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Carbon dioxide, total; Conductivity meter (WTW, Weilheim, Gemany); Cyanobacteria; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Growth rate, standard deviation; Laboratory experiment; Laboratory strains; Mass spectrometer ANCA-SL 20-20 Europa Scientific; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Particulate organic carbon, per cell; Particulate organic carbon content per cell, standard deviation; Particulate organic nitrogen per cell; Particulate organic nitrogen per cell, standard deviation; Pelagos; pH; pH, Electrode; pH, standard deviation; Phosphate; Phytoplankton; Radiation, photosynthetically active; Salinity; Single species; Temperature, water; Trichodesmium sp.; Walz 4pi sensor
    Type: Dataset
    Format: text/tab-separated-values, 96 data points
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  • 3
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    PANGAEA
    In:  Supplement to: Kranz, Sven A; Levitan, Orly; Richter, Klaus-Uwe; Prasil, O; Beran-Frank, Ilana; Rost, Björn (2010): Combined effects of CO2 and light on the N2-fixing cyanobacterium Trichodesmium IMS101: Physiological responses. Plant Physiology, 154, 334-345, https://doi.org/10.1104/pp.110.159145
    Publication Date: 2024-07-08
    Description: Recent studies on the diazotrophic cyanobacterium Trichodesmium erythraeum(IMS101) showed that increasing CO2 partial pressure (pCO2) enhances N2 fixation and growth. Significant uncertainties remain as to the degree of the sensitivity to pCO2, its modification by other environmental factors, and underlying processes causing these responses. To address these questions, we examined the responses ofTrichodesmium IMS101 grown under a matrix of low and high levels of pCO2 (150 and 900 µatm) and irradiance (50 and 200 µmol photons m-2 s-1). Growth rates as well as cellular carbon and nitrogen contents increased with increasing pCO2 and light levels in the cultures. The pCO2-dependent stimulation in organic carbon and nitrogen production was highest under low light. High pCO2 stimulated rates of N2fixation and prolonged the duration, while high light affected maximum rates only. Gross photosynthesis increased with light but did not change with pCO2. HCO3- was identified as the predominant carbon source taken up in all treatments. Inorganic carbon uptake increased with light, but only gross CO2 uptake was enhanced under high pCO2. A comparison between carbon fluxes in vivo and those derived from 13C fractionation indicates high internal carbon cycling, especially in the low-pCO2treatment under high light. Light-dependent oxygen uptake was only detected underlow pCO2 combined with high light or when low-light-acclimated cells were exposed to high light, indicating that the Mehler reaction functions also as a photoprotective mechanism in Trichodesmium. Our data confirm the pronounced pCO2 effect on N2fixation and growth in Trichodesmium and further show a strong modulation of these effects by light intensity. We attribute these responses to changes in the allocation of photosynthetic energy between carbon acquisition and the assimilation of carbon and nitrogen under elevated pCO2. These findings are supported by a complementarystudy looking at photosynthetic fluorescence parameters of photosystem II, photosynthetic unit stoichiometry (photosystem I:photosystem II), and pool sizes of key proteins in carbon and nitrogen acquisition.
    Keywords: Alkalinity, Gran titration (Gran, 1950); Alkalinity, total; Alkalinity, total, standard deviation; Aragonite saturation state; Bacteria; Bicarbonate ion; Bicarbonate uptake in chlorophyll, standard deviation; Bicarbonate uptake rate, per chlorophyll a; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated, see reference(s); Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbon, organic, particulate, per cell; Carbon, organic, particulate, production per cell; Carbon/Nitrogen ratio; Carbon/Nitrogen ratio, standard deviation; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Carbon dioxide, standard deviation; Carbon dioxide uptake, per chlorophyll, standard deviation; Carbon dioxide uptake rate, per chlorophyll a; Chlorophyll a, standard deviation; Chlorophyll a per cell; Comment; Cyanobacteria; Determined by acetylene reduction assay using a gas chromatograph; EPOCA; EUR-OCEANS; European network of excellence for Ocean Ecosystems Analysis; European Project on Ocean Acidification; Experimental treatment; Fixation of carbon in chlorophyll; Fixation of carbon in chlorophyll, standard deviation; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gross oxygen evolution, per chlorophyll a; Gross oxygen evolution, standard deviation; Growth/Morphology; Growth rate; Growth rate, standard deviation; Laboratory experiment; Laboratory strains; Light; Mass spectrometer ANCA-SL 20-20 Europa Scientific; Nitrogen fixation rate, standard deviation; Nitrogen fixation rate per chlorophyll a; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Other metabolic rates; Oxygen consumption, standard deviation; Oxygen consumption per chlorophyll a; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Particulate organic carbon, production, standard deviation; Particulate organic carbon content per cell, standard deviation; Particulate organic nitrogen per cell; Particulate organic nitrogen per cell, standard deviation; Particulate organic nitrogen production, standard deviation; Particulate organic phosphorus per cell; Particulate organic phosphorus per cell, standard deviation; Pelagos; pH; pH, standard deviation; pH meter (Metrohm electrodes); Phytoplankton; Primary production/Photosynthesis; Production of particulate organic nitrogen; Radiation, photosynthetically active; Respiration; Salinity; see reference(s); Single species; Temperature, water; Time in hours; Trichodesmium sp.
    Type: Dataset
    Format: text/tab-separated-values, 1788 data points
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  • 4
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    PANGAEA
    In:  Supplement to: Wonik, Thomas; Grelle, Thomas; Handwerger, David A; Jarrard, Richard D; McKee, Andrew; Patterson, Taylor; Paulsen, Timothy S; Pierdominici, Simona; Schmitt, Douglas R; Schröder, Henning; Speece, Marvin; Wilson, Terry; SMS Science Team (2009): Downhole measurements in the AND-2A borehole, ANDRILL southern McMurdo Sound Project, Antarctica. Terra Antartica, 15(1), 41-48, hdl:10013/epic.43904.d001
    Publication Date: 2024-07-06
    Description: Under the framework of the ANDRILL Southern McMurdo Sound (SMS) Project successful downhole experiments were conducted in the 1138.54 metre (m)-deep AND-2A borehole. Wireline logs successfully recorded were: magnetic susceptibility, spectral gamma ray, sonic velocity, borehole televiewer, neutron porosity, density, calliper, geochemistry, temperature and dipmeter. A resistivity tool and its backup both failed to operate, thus resistivity data were not collected. Due to hole conditions, logs were collected in several passes from the total depth at ~1138 metres below sea floor (mbsf) to ~230 mbsf, except for some intervals that were either inaccessible due to bridging or were shielded by the drill string. Furthermore, a Vertical Seismic Profile (VSP) was created from ~1000 mbsf up to the sea floor. The first hydraulic fracturing stress measurements in Antarctica were conducted in the interval 1000-1138 mbsf. This extensive data set will allow the SMS Science Team to reach some of the ambitious objectives of the SMS Project. Valuable contributions can be expected for the following topics: cyclicity and climate change, heat flux and fluid flow, seismic stratigraphy in the Victoria Land Basin, and structure and state of the modern crustal stress field.
    Keywords: Analog impulse tool (D48); AND-2A; ANDRILL; Antarctic Geological Drilling; Antares digital loggin tool; Density, wet bulk; DEPTH, sediment/rock; DRILL; Drilling/drill rig; HNGS Standard total Gamma Ray; Magnetic susceptibility, volume; McMurdo Sound; McMurdo Station; Porosity; Potassium; Priority Programme 1158 Antarctic Research with Comparable Investigations in Arctic Sea Ice Areas; SMS; Southern McMurdo Sound; SPP1158; Thorium; Uranium
    Type: Dataset
    Format: text/tab-separated-values, 40775 data points
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  • 5
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    PANGAEA
    In:  European Pollen Database (EPD)
    Publication Date: 2024-07-05
    Keywords: Abies; Alnus; ARAL86; Artemisia; Betula; Brassica; Bryales; Cannabaceae; Carpinus; Caryophyllaceae; Chenopodiaceae; Compositae; Core86; Corylus; Cyperaceae; DEPTH, sediment/rock; Ephedra; Euphorbia; Euphorbiaceae; Fagus; Gramineae; Iridaceae; Juglans; Labiatae; Lake Aral, Kazakhstan; Leguminosae; Lycopodiaceae; Lycopodium; Malva; Malvaceae; Myriophyllum; Ostrya; Picea; Pinus; Plantaginaceae; Polygonaceae; Polypodiaceae; Potamogeton; Quercus; Ranunculaceae; Rubiaceae; Salix; Sparganium; Sphagnum; Tilia; Typha; Ulmus; Umbelliferae; Unknown pollen and spores; Zygophyllaceae
    Type: Dataset
    Format: text/tab-separated-values, 1518 data points
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  • 6
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    PANGAEA
    In:  European Pollen Database (EPD)
    Publication Date: 2024-07-05
    Keywords: Alnus undifferentiated; Alnus viridis subsp. fruticosa; Artemisia; Asteroideae; Betula exilis; Betula fruticosae; Betula platyphylla; Botrychium; Bryales; Caryophyllaceae; CHERNYAR; Cherny Yar, Russia; Cyperaceae; DEPTH, sediment/rock; Diphasium alpinum; Equisetum; Ericales; Euphorbia; Gramineae; Huperzia selago; Labiatae; Larix; Leguminosae; Lycopodium clavatum; Lycopodium undifferentiated; Menyanthes trifoliata; Myriophyllum; Pinus pumila; Polypodiaceae; Ranunculaceae; Rosaceae; Salix; Sphagnum; Thalictrum; Umbelliferae
    Type: Dataset
    Format: text/tab-separated-values, 480 data points
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  • 7
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    PANGAEA
    In:  European Pollen Database (EPD)
    Publication Date: 2024-07-05
    Keywords: Abies; Alnus glutinosa; Alnus undifferentiated; Alnus viridis subsp. fruticosa; Artemisia; Asteroideae; BAIDARA; Baidara, Russia; Betula sect. Albae; Betula sect. Nanae; Bryales; Caprifoliaceae; Caryophyllaceae; Chenopodiaceae; Cichorioideae; Corylus; Cruciferae; Cyperaceae; DEPTH, sediment/rock; Diphasium alpinum; Encalypta; Equisetum; Ericales; Fagus; Gramineae; Huperzia selago subsp. arctica; Juglans; Labiatae; Larix; Leguminosae; Linaceae; Lycopodium annotinum; Lycopodium clavatum; Lycopodium dubium; Lycopodium undifferentiated; Onagraceae; Picea abies subsp. obovata; Pinus diploxylon; Pinus haploxylon; Polemonium; Polygonaceae; Polypodiaceae; Ranunculaceae; Rosaceae; Salix; Scrophulariaceae; Sparganium; Sphagnum; Thalictrum; Tilia; Typha; Ulmus; Umbelliferae; Valeriana
    Type: Dataset
    Format: text/tab-separated-values, 3417 data points
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  • 8
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    PANGAEA
    In:  Supplement to: Werner, Kirstin; Tarasov, Pavel E; Andreev, Andrei A; Müller, Stefanie; Kienast, Frank; Zech, Michael; Zech, Wolfgang; Diekmann, Bernhard (2010): A 12.5-kyr history of vegetation dynamics and mire development with evidence of Younger Dryas larch presence in the Verkhoyansk Mountains, East Siberia, Russia. Boreas, 39, 56-68, https://doi.org/10.1111/j.1502-3885.2009.00116.x
    Publication Date: 2024-07-05
    Description: A 415cm thick permafrost peat section from the Verkhoyansk Mountains was radiocarbon-dated and studied using palaeobotanical and sedimentological approaches. Accumulation of organic-rich sediment commenced in a former oxbow lake, detached from a Dyanushka River meander during the Younger Dryas stadial, at ~12.5 kyr BP. Pollen data indicate that larch trees, shrub alder and dwarf birch were abundant in the vegetation at that time. Local presence of larch during the Younger Dryas is documented by well-preserved and radiocarbon-dated needles and cones. The early Holocene pollen assemblages reveal high percentages of Artemisia pollen, suggesting the presence of steppe-like communities around the site, possibly in response to a relatively warm and dry climate ~11.4-11.2 kyr BP. Both pollen and plant macrofossil data demonstrate that larch woods were common in the river valley. Remains of charcoal and pollen of Epilobium indicate fire events and mark a hiatus ~11.0-8.7 kyr BP. Changes in peat properties, C31/C27 alkane ratios and radiocarbon dates suggest that two other hiatuses occurred ~8.2-6.9 and ~6.7-0.6 kyr BP. Prior to 0.6 kyr BP, a major fire destroyed the mire surface. The upper 60 cm of the studied section is composed of aeolian sands modified in the uppermost part by the modern soil formation. For the first time, local growth of larch during the Younger Dryas has been verified in the western foreland of the Verkhoyansk Mountains (~170km south of the Arctic Circle), thus increasing our understanding of the quick reforestation of northern Eurasia by the early Holocene.
    Keywords: AGE; Alnus fruticosa-type; Alnus glutinosa; Apiaceae; Artemisia; Asteraceae; Betula alba-type; Betula nana-type; Botrychium; Botrychium lunaria-type; Brassicaceae; Bryozoa, statoblast; Callitriche; Caryophyllaceae; Chenopodiaceae; Chironomidae remains; Cichoriaceae; Cladocera; Cosmarium; Counting, palynology; Cyperaceae; DEPTH, sediment/rock; Drosera; Ephedra; Epilobium; Equisetum; Ericales; Glomus; Huperzia; Indeterminata; Insect remains; Integrierte Analyse zwischeneiszeitlicher Klimadynamik; INTERDYNAMIK; Juniperus; K7/P2; Lamiaceae; Larix; Linum; Lycopodium; Lycopodium annotinum; Lycopodium clavatum; Menyanthes trifoliata; Myriophyllum; Neorhabdocoela; Pediastrum; Picea; Pinaceae; Pinus pumila; Poaceae; Podospora-type; Pollen, per unit sediment mass; Pollen, redeposited; Pollen, total; Polygonum bistorta-type; Polygonum lapathifolium-type; Polypodium; Potamogeton; PROFILE; Profile sampling; Ranunculaceae; Riccia; Rosaceae; Rumex; Salix; Sanguisorba officinalis; Saxifraga; Scrofulariaceae; Selaginella rupestris; Siberia, Russia; Sordaria; Sparganium; Sphagnum; Sporormiella; Stomata pinaceae; Tardigrada; Thalictrum; Urtica; Zygospore
    Type: Dataset
    Format: text/tab-separated-values, 5400 data points
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  • 9
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    PANGAEA
    In:  European Pollen Database (EPD)
    Publication Date: 2024-07-05
    Keywords: Alnus hirsuta; Alnus viridis subsp. fruticosa; Artemisia; Asteroideae; Betula exilis; Betula fruticosae; Betula platyphylla; BOGUDA; Botrychium boreale; Bryales; Caryophyllaceae; Chenopodiaceae; Cichorioideae; Cyperaceae; DEPTH, sediment/rock; Diphasium complanatum; Encalypta; Ephedra monosperma; Equisetum; Ericales; Galium; Gramineae; Labiatae; Lake Boguda, Russia; Larix dahurica; Lycopodium annotinum; Lycopodium clavatum; Onagraceae; Picea abies subsp. obovata; Pinus haploxylon; Pinus sylvestris; Polygonum; Polygonum amphibium; Polypodiaceae; Potamogeton; Ranunculaceae; Rosaceae; Salix; Sanguisorba officinalis; Selaginella sibirica; Sphagnum; Thalictrum; Typha; Umbelliferae
    Type: Dataset
    Format: text/tab-separated-values, 2378 data points
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  • 10
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    PANGAEA
    In:  European Pollen Database (EPD)
    Publication Date: 2024-07-05
    Keywords: Abies; Alisma; Alnus viridis subsp. fruticosa; Artemisia; Betula nana; Betula pendula; Bryales; BUGRIST; Bugristoe, Russia; Caryophyllaceae; Chenopodiaceae; Compositae; Corylus; Cyperaceae; DEPTH, sediment/rock; Dicranum; Dryopteris-type; Equisetum; Ericaceae; Gramineae; Indeterminable: undifferentiated; Larix; Lycopodium clavatum; Menyanthes trifoliata; Picea; Pinus sibirica; Pinus sylvestris; Pteridium; Rosaceae; Salix; Scheuchzeria; Sphagnum; Tilia; Typha latifolia; Umbelliferae
    Type: Dataset
    Format: text/tab-separated-values, 2144 data points
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